Index of /pp/annotation~Funannotate/contents/fun/predict_misc
Name Last modified Size Description
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Parent Directory -
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weights.evm.txt 2024-05-10 14:37 241
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trnascan.no-overlaps.gff3 2024-05-10 20:01 199K
trnascan.gff3.sorted.gff3 2024-05-10 20:01 246K
trnascan.gff3 2024-05-10 20:01 246K
transcript_alignments.gff3 2024-05-10 00:56 29M
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tbl2asn/ 2024-05-10 20:09 -
tRNAscan.out 2024-05-10 20:01 47K
tRNAscan.len-filtered.out 2024-05-10 20:01 47K
stringtie.gff3 2024-05-10 05:49 44M
snaptrain/ 2024-05-10 13:24 -
snap.training.zff 2024-05-10 13:24 628K
snap-training.scaffolds.fasta 2024-05-10 13:24 421M
snap-trained.hmm 2024-05-10 13:24 45K
snap-predictions.gff3 2024-05-10 13:53 121M
snap-prediction.zff 2024-05-10 13:52 28M
repeats.xml 2024-05-10 19:45 38M
repeatmasker.bed.sorted.bed 2024-05-10 19:45 80M
repeatmasker.bed 2024-05-10 00:56 80M
repeat.gene.models.txt 2024-05-10 19:45 211K
proteins.combined.fa 2024-05-10 00:56 204M
protein_alignments.gff3 2024-05-10 01:44 5.4M
pasa_predictions.gff3 2024-05-10 00:54 28M
pasa.training.tmp.gtf 2024-05-10 04:31 18M
pasa.training.tmp.f.good.gtf 2024-05-10 04:31 6.0M
pasa.training.tmp.f.bad.gtf 2024-05-10 04:31 23M
pasa.training.tmp.c.gtf 2024-05-10 04:31 19M
pasa.training.tmp.average_gene_length.out 2024-05-10 04:31 22
p2g.diamond.out 2024-05-10 01:44 35M
hints.all.tmp 2024-05-10 01:44 48M
hints.all.sort.tmp 2024-05-10 01:45 48M
hints.P.gff 2024-05-10 01:44 6.1M
hints.M.gff 2024-05-10 00:56 35M
hints.BAM.gff 2024-05-10 00:56 6.4M
hints.ALL.gff 2024-05-10 01:45 29M
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gmhmm.mod 2024-05-10 03:51 958K
glimmerhmm/ 2024-05-10 13:56 -
glimmerhmm.log 2024-05-10 14:01 946
glimmerhmm-predictions.gff3 2024-05-10 14:37 73M
glimmerHMM.output.raw 2024-05-10 14:37 53M
glimmer.exons 2024-05-10 13:53 565K
genome.softmasked.fa 2024-05-10 00:56 436M
genome.repeats.to.remove.gff 2024-05-10 19:45 840K
genemark/ 2024-05-10 04:30 -
genemark.temp.gff 2024-05-10 04:31 161M
genemark.gff 2024-05-10 04:30 180M
genemark.evm.gff3.bak 2024-05-10 04:31 161M
genemark.evm.gff3 2024-05-10 04:31 161M
gene_predictions.gff3 2024-05-10 14:37 481M
final_training_models.gff3 2024-05-10 04:32 3.6M
evm.round1.proteins.fa 2024-05-10 19:44 17M
evm.round1.gff3.sorted.gff 2024-05-10 19:45 69M
evm.round1.gff3 2024-05-10 19:44 69M
evm.cleaned.gff3.sorted.gff3 2024-05-10 20:01 63M
evm.cleaned.gff3 2024-05-10 19:45 63M
coding_quarry.gff3 2024-05-10 13:24 37M
bam_hints.tmp 2024-05-10 00:56 6.5M
bam_hints.sorted.tmp 2024-05-10 00:56 6.5M
bam_hints.joined.tmp 2024-05-10 00:56 6.5M
bad_models.gff 2024-05-10 19:45 2.7M
augustus.training.pasa.gb.train 2024-05-10 04:32 14M
augustus.training.pasa.gb.test 2024-05-10 04:32 1.6M
augustus.training.pasa.gb 2024-05-10 04:32 16M
augustus.initial.training.txt 2024-05-10 04:32 1.1M
augustus.gff3 2024-05-10 05:49 81M
augustus.evm.gff3.bak 2024-05-10 05:49 61M
augustus.evm.gff3 2024-05-10 05:49 60M
assembly-gaps.bed.sorted.gff3 2024-05-10 20:01 629K
assembly-gaps.bed 2024-05-10 00:56 629K
ab_initio_parameters/ 2024-05-10 14:37 -
EVM/ 2024-05-10 14:48 -
CodingQuarry/ 2024-05-10 13:23 -