Training data created successfully! Check exons.dat and seqs for accuracy.


Acceptor sites for training: 17811
False acceptor sites for training: 78257
Donor sites for training: 17689
False donor sites for training: 78248

Default threshold value for the acceptor sites: -14.166668
Default threshold value for the donor sites: -6.99202

Start sites for training: 2605
False start sites for training: 124933

Default threshold value for the start sites: -4.130303


Stop sites for training: 2606
False stop sites for training: 150871

Default threshold value for the stop sites: -3.628094


IMMs trained successfully.


GlimmerHMM was trained successfully! All training files are in:
fun/predict_misc/glimmerhmm.

Different thresholds that can be chosen for the splice sites
can be consulted in:
- false.acc for acceptor sites
- false.don for donor sites.

Different threshold that can be chosen for the start sites
can be consulted in false.atg