Index of /pp/RNA-seq~Trinity-kallisto-sleuth/contents
Name Last modified Size Description
![[PARENTDIR]](/icons/back.gif)
Parent Directory -
![[ ]](/icons/script.gif)
wrapper.sh 2019-09-06 17:44 229
![[ ]](/icons/unknown.gif)
transcriptSuperScaffold.fasta 2019-09-07 23:35 20M
transcriptSuperScaffold.bed 2019-09-07 23:35 3.2M
tmp.superscaff.rnammer.gff 2019-09-07 23:35 396
![[TXT]](/icons/text.gif)
tmhmm.out 2019-09-07 23:35 0
swissprot.blastx.outfmt6 2019-09-07 23:35 1.1M
swissprot.blastp.outfmt6 2019-09-07 23:35 822K
statistics~sleuth 2019-09-06 17:44 8.7K
statistics~scatter_with_variance 2019-09-06 17:44 6.7K
statistics~sample_distance 2019-09-06 17:44 3.6K
statistics~edgeR 2019-09-06 17:44 4.4K
statistics~DESeq2 2019-09-06 17:44 4.3K
sleuth.sample.input.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.y 2019-09-08 00:15 17
sleuth.sample.input.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.x 2019-09-08 00:15 17
sleuth.sample.input.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.y 2019-09-08 00:15 17
sleuth.sample.input.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.x 2019-09-08 00:15 13
sleuth.sample.input.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.y 2019-09-08 00:15 17
sleuth.sample.input.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.x 2019-09-08 00:15 13
sleuth.sample.input.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.y 2019-09-08 00:15 17
sleuth.sample.input.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.x 2019-09-08 00:15 13
sleuth.sample.input.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt.y 2019-09-08 00:15 17
sleuth.sample.input.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt.x 2019-09-08 00:15 13
sleuth.sample.input.0h_A_1.fq.gz.0h_B_1.fq.gz.txt.y 2019-09-08 00:15 13
sleuth.sample.input.0h_A_1.fq.gz.0h_B_1.fq.gz.txt.x 2019-09-08 00:15 13
sleuth.kallisto.isoform.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.tpm.xy 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.id 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.tpm.xy 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.id 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.tpm.xy 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.id 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.tpm.xy 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.id 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt.tpm.xy 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt.id 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.0h_B_1.fq.gz.txt.tpm.xy 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.0h_B_1.fq.gz.txt.id 2019-09-08 00:15 0
sleuth.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.0h_B_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.gene.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.gene.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.gene.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.gene.counts.matrix.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.gene.counts.matrix.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 0
sleuth.kallisto.gene.counts.matrix.0h_A_1.fq.gz.0h_B_1.fq.gz.txt 2019-09-08 00:15 0
signalp.out 2019-09-07 23:35 59K
sigP.log 2019-09-07 23:35 1.0M
save_pid.txt 2019-09-07 23:35 6
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sampleDist.png 2019-09-07 23:35 13K
sample.txt2 2019-09-07 23:35 53
sample.input.txt 2019-09-07 23:35 133
sample.input.pair.txt 2019-09-07 23:35 180
sample.input.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.y 2019-09-08 00:15 17
sample.input.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.x 2019-09-08 00:15 17
sample.input.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 81
sample.input.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.y 2019-09-08 00:15 17
sample.input.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.x 2019-09-08 00:15 13
sample.input.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 73
sample.input.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.y 2019-09-08 00:15 17
sample.input.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.x 2019-09-08 00:15 13
sample.input.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 73
sample.input.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.y 2019-09-08 00:15 17
sample.input.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.x 2019-09-08 00:15 13
sample.input.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt 2019-09-08 00:15 73
sample.input.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt.y 2019-09-08 00:15 17
sample.input.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt.x 2019-09-08 00:15 13
sample.input.0h_A_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 73
sample.input.0h_A_1.fq.gz.0h_B_1.fq.gz.txt.y 2019-09-07 23:35 13
sample.input.0h_A_1.fq.gz.0h_B_1.fq.gz.txt.x 2019-09-07 23:35 13
sample.input.0h_A_1.fq.gz.0h_B_1.fq.gz.txt 2019-09-07 23:35 65
run-trinotate-import.sh 2019-09-07 23:35 1.3K
run-sleuth.1week_A1_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 1.5K
run-sleuth.0h_B_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 1.5K
run-sleuth.0h_B_1.fq.gz.1week_A1_1.fq.gz.isoform.R 2019-09-08 00:15 1.5K
run-sleuth.0h_A_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 1.5K
run-sleuth.0h_A_1.fq.gz.1week_A1_1.fq.gz.isoform.R 2019-09-08 00:15 1.5K
run-sleuth.0h_A_1.fq.gz.0h_B_1.fq.gz.isoform.R 2019-09-08 00:15 1.4K
run-make-histogram.R 2019-09-07 23:35 428
run-make-deg-html.sh 2019-09-07 23:35 1.0K
run-kegg.sh 2019-09-07 23:35 1.1K
run-edgeR.1week_A1_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 527
run-edgeR.1week_A1_1.fq.gz.1week_A2_1.fq.gz.go.R 2019-09-08 00:15 517
run-edgeR.1week_A1_1.fq.gz.1week_A2_1.fq.gz.gene.R 2019-09-08 00:15 521
run-edgeR.0h_B_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 519
run-edgeR.0h_B_1.fq.gz.1week_A2_1.fq.gz.go.R 2019-09-08 00:15 509
run-edgeR.0h_B_1.fq.gz.1week_A2_1.fq.gz.gene.R 2019-09-08 00:15 513
run-edgeR.0h_B_1.fq.gz.1week_A1_1.fq.gz.isoform.R 2019-09-08 00:15 519
run-edgeR.0h_B_1.fq.gz.1week_A1_1.fq.gz.go.R 2019-09-08 00:15 509
run-edgeR.0h_B_1.fq.gz.1week_A1_1.fq.gz.gene.R 2019-09-08 00:15 513
run-edgeR.0h_A_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 519
run-edgeR.0h_A_1.fq.gz.1week_A2_1.fq.gz.go.R 2019-09-08 00:15 509
run-edgeR.0h_A_1.fq.gz.1week_A2_1.fq.gz.gene.R 2019-09-08 00:15 513
run-edgeR.0h_A_1.fq.gz.1week_A1_1.fq.gz.isoform.R 2019-09-08 00:15 519
run-edgeR.0h_A_1.fq.gz.1week_A1_1.fq.gz.go.R 2019-09-08 00:15 509
run-edgeR.0h_A_1.fq.gz.1week_A1_1.fq.gz.gene.R 2019-09-08 00:15 513
run-edgeR.0h_A_1.fq.gz.0h_B_1.fq.gz.isoform.R 2019-09-08 00:15 511
run-edgeR.0h_A_1.fq.gz.0h_B_1.fq.gz.go.R 2019-09-08 00:15 501
run-edgeR.0h_A_1.fq.gz.0h_B_1.fq.gz.gene.R 2019-09-08 00:15 505
run-clusterplot.R 2019-09-07 23:35 1.7K
run-DESeq2.1week_A1_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 736
run-DESeq2.1week_A1_1.fq.gz.1week_A2_1.fq.gz.go.R 2019-09-08 00:15 726
run-DESeq2.1week_A1_1.fq.gz.1week_A2_1.fq.gz.gene.R 2019-09-08 00:15 730
run-DESeq2.0h_B_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 720
run-DESeq2.0h_B_1.fq.gz.1week_A2_1.fq.gz.go.R 2019-09-08 00:15 710
run-DESeq2.0h_B_1.fq.gz.1week_A2_1.fq.gz.gene.R 2019-09-08 00:15 714
run-DESeq2.0h_B_1.fq.gz.1week_A1_1.fq.gz.isoform.R 2019-09-08 00:15 720
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run-DESeq2.0h_B_1.fq.gz.1week_A1_1.fq.gz.gene.R 2019-09-08 00:15 714
run-DESeq2.0h_A_1.fq.gz.1week_A2_1.fq.gz.isoform.R 2019-09-08 00:15 720
run-DESeq2.0h_A_1.fq.gz.1week_A2_1.fq.gz.go.R 2019-09-08 00:15 710
run-DESeq2.0h_A_1.fq.gz.1week_A2_1.fq.gz.gene.R 2019-09-08 00:15 714
run-DESeq2.0h_A_1.fq.gz.1week_A1_1.fq.gz.isoform.R 2019-09-08 00:15 720
run-DESeq2.0h_A_1.fq.gz.1week_A1_1.fq.gz.go.R 2019-09-08 00:15 710
run-DESeq2.0h_A_1.fq.gz.1week_A1_1.fq.gz.gene.R 2019-09-08 00:15 714
run-DESeq2.0h_A_1.fq.gz.0h_B_1.fq.gz.isoform.R 2019-09-08 00:15 704
run-DESeq2.0h_A_1.fq.gz.0h_B_1.fq.gz.go.R 2019-09-08 00:15 694
run-DESeq2.0h_A_1.fq.gz.0h_B_1.fq.gz.gene.R 2019-09-08 00:15 698
run-DE.1week_A1_1.fq.gz.1week_A2_1.fq.gz.sh 2019-09-08 00:15 4.2K
run-DE.0h_B_1.fq.gz.1week_A2_1.fq.gz.sh 2019-09-08 00:15 4.0K
run-DE.0h_B_1.fq.gz.1week_A1_1.fq.gz.sh 2019-09-08 00:15 4.0K
run-DE.0h_A_1.fq.gz.1week_A2_1.fq.gz.sh 2019-09-08 00:15 4.0K
run-DE.0h_A_1.fq.gz.1week_A1_1.fq.gz.sh 2019-09-08 00:15 4.0K
run-DE.0h_A_1.fq.gz.0h_B_1.fq.gz.sh 2019-09-07 23:35 3.8K
result.isoform.xlsx 2019-09-07 23:35 14M
result.go.xlsx 2019-09-07 23:35 553K
result.gene.xlsx 2019-09-07 23:35 13M
result.edgeR.kallisto.isoform.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.1week_A1_1.fq.gz.up.1week_A2_1.fq.gz.down.txt.xlsx 2019-09-08 00:15 3.2K
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result.edgeR.kallisto.isoform.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.1week_A1_1.fq.gz.down.1week_A2_1.fq.gz.up.txt.xlsx 2019-09-08 00:15 3.2K
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result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.0h_B_1.fq.gz.up.1week_A2_1.fq.gz.down.txt.xlsx 2019-09-08 00:15 3.2K
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.0h_B_1.fq.gz.up.1week_A2_1.fq.gz.down.txt 2019-09-08 00:15 0
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.0h_B_1.fq.gz.down.1week_A2_1.fq.gz.up.txt.xlsx 2019-09-08 00:15 3.2K
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A2_1.fq.gz.txt.0h_B_1.fq.gz.down.1week_A2_1.fq.gz.up.txt 2019-09-08 00:15 0
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.0h_B_1.fq.gz.up.1week_A1_1.fq.gz.down.txt.xlsx 2019-09-08 00:15 3.2K
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.0h_B_1.fq.gz.up.1week_A1_1.fq.gz.down.txt 2019-09-08 00:15 0
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.0h_B_1.fq.gz.down.1week_A1_1.fq.gz.up.txt.xlsx 2019-09-08 00:15 3.2K
result.edgeR.kallisto.isoform.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt.0h_B_1.fq.gz.down.1week_A1_1.fq.gz.up.txt 2019-09-08 00:15 0
result.edgeR.kallisto.isoform.counts.matrix.0h_A_1.fq.gz.1week_A2_1.fq.gz.txt.0h_A_1.fq.gz.up.1week_A2_1.fq.gz.down.txt.xlsx 2019-09-08 00:15 3.2K
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result.edgeR.kallisto.go.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.1week_A1_1.fq.gz.up.1week_A2_1.fq.gz.down.txt.xlsx 2019-09-08 00:15 3.2K
result.edgeR.kallisto.go.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.1week_A1_1.fq.gz.up.1week_A2_1.fq.gz.down.txt 2019-09-08 00:15 0
result.edgeR.kallisto.go.counts.matrix.1week_A1_1.fq.gz.1week_A2_1.fq.gz.txt.1week_A1_1.fq.gz.down.1week_A2_1.fq.gz.up.txt.xlsx 2019-09-08 00:15 3.2K
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DESeq2.kallisto.go.counts.matrix.0h_B_1.fq.gz.1week_A1_1.fq.gz.txt 2019-09-08 00:15 0
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0_result.html 2019-09-07 23:35 40K