[yoshitake.kazutoshi@m24 Bridger_r2014-12-01]$ cd /suikou/download/
[yoshitake.kazutoshi@m24 download]$ wget https://github.com/pachterlab/kallisto/releases/download/v0.43.1/kallisto_linux-v0.43.1.tar.gz
--2017-05-03 09:42:57-- https://github.com/pachterlab/kallisto/releases/download/v0.43.1/kallisto_linux-v0.43.1.tar.gz
github.com (github.com) をDNSに問いあわせています... 192.30.255.112, 192.30.255.113
github.com (github.com)|192.30.255.112|:443 に接続しています... 接続しました。
HTTP による接続要求を送信しました、応答を待っています... 302 Found
場所: https://github-cloud.s3.amazonaws.com/releases/26562905/a2ba43ee-0d84-11e7-89b9-84264ba80200.gz?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=AKIAISTNZFOVBIJMK3TQ%2F20170503%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20170503T004258Z&X-Amz-Expires=300&X-Amz-Signature=25c5b7cc1d2579f292c6cda2364da8f79e242026f8225cbec2b2b196b68b915c&X-Amz-SignedHeaders=host&actor_id=0&response-content-disposition=attachment%3B%20filename%3Dkallisto_linux-v0.43.1.tar.gz&response-content-type=application%2Foctet-stream [続く]
--2017-05-03 09:42:58-- https://github-cloud.s3.amazonaws.com/releases/26562905/a2ba43ee-0d84-11e7-89b9-84264ba80200.gz?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=AKIAISTNZFOVBIJMK3TQ%2F20170503%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20170503T004258Z&X-Amz-Expires=300&X-Amz-Signature=25c5b7cc1d2579f292c6cda2364da8f79e242026f8225cbec2b2b196b68b915c&X-Amz-SignedHeaders=host&actor_id=0&response-content-disposition=attachment%3B%20filename%3Dkallisto_linux-v0.43.1.tar.gz&response-content-type=application%2Foctet-stream
github-cloud.s3.amazonaws.com (github-cloud.s3.amazonaws.com) をDNSに問いあわせています... 54.231.72.115
github-cloud.s3.amazonaws.com (github-cloud.s3.amazonaws.com)|54.231.72.115|:443 に接続しています... 接続しました。
HTTP による接続要求を送信しました、応答を待っています... 200 OK
長さ: 5829824 (5.6M) [application/octet-stream]
`kallisto_linux-v0.43.1.tar.gz' に保存中
100%[========================================================================================>] 5,829,824 2.43MB/s 時間 2.3s
2017-05-03 09:43:01 (2.43 MB/s) - `kallisto_linux-v0.43.1.tar.gz' へ保存完了 [5829824/5829824]
[yoshitake.kazutoshi@m24 download]$ tar zvxf kallisto_linux-v0.43.1.tar.gz
kallisto_linux-v0.43.1/
kallisto_linux-v0.43.1/license.txt
kallisto_linux-v0.43.1/kallisto
kallisto_linux-v0.43.1/test/
kallisto_linux-v0.43.1/test/reads_2.fastq.gz
kallisto_linux-v0.43.1/test/transcripts.fasta.gz
kallisto_linux-v0.43.1/test/README.md
kallisto_linux-v0.43.1/test/Snakefile
kallisto_linux-v0.43.1/test/reads_1.fastq.gz
kallisto_linux-v0.43.1/README.md
[yoshitake.kazutoshi@m24 download]$ mv kallisto_linux-v0.43.1 /suikou/tool
[yoshitake.kazutoshi@m24 download]$ link1 /suikou/tool/kallisto_linux-v0.43.1/
[yoshitake.kazutoshi@m24 download]$ kallisto
kallisto 0.43.1
Usage: kallisto <CMD> [arguments] ..
Where <CMD> can be one of:
index Builds a kallisto index
quant Runs the quantification algorithm
pseudo Runs the pseudoalignment step
h5dump Converts HDF5-formatted results to plaintext
version Prints version information
cite Prints citation information
Running kallisto <CMD> without arguments prints usage information for <CMD>