# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- k119_97034_2 - 503 Ribosomal_S7 PF00177.16 148 0.0015 15.3 0.0 1 1 2.1e-06 0.0044 13.8 0.0 43 146 187 285 184 287 0.94 # 729 # 2237 # 1 # ID=260_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 k119_38979_4 - 144 Ribosomal_L11 PF00298.14 69 4.1e-31 104.1 0.3 1 1 3.2e-34 6.8e-31 103.5 0.3 1 68 72 139 72 140 0.99 # 1470 # 1901 # 1 # ID=320_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 k119_297889_8 - 282 Ribosomal_S2 PF00318.15 211 3.8e-84 278.3 0.0 1 1 4.2e-87 4.4e-84 278.1 0.0 1 211 9 225 9 225 0.99 # 6077 # 6922 # -1 # ID=14_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 k119_288245_1 - 39 Ribosomal_S2 PF00318.15 211 7.9e-12 42.0 0.2 1 1 8.1e-15 8.5e-12 41.9 0.2 1 31 9 39 9 39 0.97 # 3 # 119 # -1 # ID=32_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479 k119_87937_3 - 170 Ribosomal_S5 PF00333.15 67 1.2e-28 95.9 3.9 1 1 2.3e-31 2.4e-28 94.9 3.9 3 66 15 78 13 79 0.97 # 453 # 962 # 1 # ID=277_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 k119_271589_2 - 463 Ribosomal_S5 PF00333.15 67 0.02 11.9 0.0 1 1 4.9e-05 0.051 10.5 0.0 15 39 421 445 405 452 0.91 # 198 # 1586 # 1 # ID=124_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 k119_87937_8 - 131 Ribosomal_S11 PF00411.14 110 1.6e-48 160.7 0.1 1 1 7.5e-52 1.6e-48 160.7 0.1 1 110 20 129 20 129 0.99 # 3575 # 3967 # 1 # ID=277_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.517 k119_38979_6 - 177 Ribosomal_L10 PF00466.15 100 2.5e-24 82.3 0.2 1 1 1.9e-27 4e-24 81.6 0.2 4 100 6 101 3 101 0.97 # 2839 # 3369 # 1 # ID=320_6;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.510 k119_38979_5 - 232 Ribosomal_L1 PF00687.16 220 9e-47 156.4 0.0 1 1 4.9e-50 1e-46 156.2 0.0 14 220 32 221 3 221 0.90 # 1902 # 2597 # 1 # ID=320_5;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 k119_87937_2 - 117 Ribosomal_L18p PF00861.17 119 2.4e-35 118.5 5.3 1 1 1.3e-38 2.7e-35 118.4 5.3 4 119 5 116 2 116 0.90 # 90 # 440 # 1 # ID=277_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 k119_70873_4 - 95 RNA_pol_Rpb6 PF01192.17 57 1.8e-19 66.4 0.0 1 1 1.3e-22 2.7e-19 65.9 0.0 1 56 7 62 7 63 0.96 # 2654 # 2938 # 1 # ID=46_4;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 k119_109283_2 - 463 SRP_SPB PF02978.14 104 4e-35 117.4 6.5 1 1 3.9e-38 4e-35 117.4 6.5 2 104 331 429 330 429 0.94 # 571 # 1959 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 k119_241556_2 - 412 SRP_SPB PF02978.14 104 0.016 12.7 0.6 1 1 3.4e-05 0.035 11.6 0.6 10 61 233 285 229 287 0.85 # 356 # 1591 # -1 # ID=120_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.485 k119_87937_3 - 170 Ribosomal_S5_C PF03719.10 74 3.2e-33 110.0 0.3 1 1 2.6e-36 5.5e-33 109.3 0.3 3 74 90 161 88 161 0.97 # 453 # 962 # 1 # ID=277_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 k119_38979_4 - 144 Ribosomal_L11_N PF03946.9 60 3.5e-33 110.1 0.4 1 1 2.5e-36 5.1e-33 109.5 0.4 1 60 8 67 8 67 0.99 # 1470 # 1901 # 1 # ID=320_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 k119_232959_2 - 888 IF-2 PF11987.3 109 8.7e-38 125.8 0.9 1 1 4.2e-41 8.7e-38 125.8 0.9 2 109 671 778 670 778 0.98 # 385 # 3048 # -1 # ID=161_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 k119_115532_3 - 421 TIGR00344 TIGR00344 847 1.3e-126 420.8 6.7 1 1 1.4e-129 1.5e-126 420.6 6.7 452 846 2 397 1 398 0.99 # 1954 # 3216 # -1 # ID=215_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.527 k119_301796_5 - 278 TIGR00344 TIGR00344 847 1.3e-119 397.6 0.0 1 1 1.4e-122 1.5e-119 397.5 0.0 1 280 5 278 5 278 0.97 # 1987 # 2820 # 1 # ID=140_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.510 k119_172870_4 - 963 TIGR00422 TIGR00422 863 0 1172.8 0.0 1 1 0 0 1172.6 0.0 1 863 1 942 1 942 0.98 # 1691 # 4579 # 1 # ID=130_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.540 k119_217743_27 - 944 TIGR00422 TIGR00422 863 4.9e-116 385.6 0.0 1 2 5e-39 1.7e-36 122.4 0.0 6 228 23 259 18 267 0.92 # 24485 # 27316 # -1 # ID=319_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 k119_217743_27 - 944 TIGR00422 TIGR00422 863 4.9e-116 385.6 0.0 2 2 5.6e-81 1.9e-78 261.2 0.0 244 744 315 833 309 902 0.86 # 24485 # 27316 # -1 # ID=319_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 k119_24748_7 - 536 TIGR00422 TIGR00422 863 4.2e-67 223.7 13.2 1 4 4.4e-45 1.6e-42 142.4 3.0 2 188 4 174 3 176 0.93 # 4837 # 6444 # 1 # ID=153_7;partial=01;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.530 k119_24748_7 - 536 TIGR00422 TIGR00422 863 4.2e-67 223.7 13.2 2 4 2.1e-08 7.3e-06 21.1 0.4 342 397 176 228 175 231 0.93 # 4837 # 6444 # 1 # ID=153_7;partial=01;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.530 k119_24748_7 - 536 TIGR00422 TIGR00422 863 4.2e-67 223.7 13.2 3 4 2.8e-13 9.9e-11 37.2 0.0 245 327 314 410 309 417 0.92 # 4837 # 6444 # 1 # ID=153_7;partial=01;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.530 k119_24748_7 - 536 TIGR00422 TIGR00422 863 4.2e-67 223.7 13.2 4 4 1.8e-09 6.4e-07 24.6 0.0 397 459 421 503 415 517 0.78 # 4837 # 6444 # 1 # ID=153_7;partial=01;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.530 k119_272488_1 - 332 TIGR00422 TIGR00422 863 4.2e-25 84.7 0.0 1 1 4.5e-27 1.6e-24 82.8 0.0 525 739 89 283 80 314 0.83 # 3 # 998 # 1 # ID=150_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 k119_56216_13 - 412 TIGR00422 TIGR00422 863 8.2e-07 24.2 0.0 1 1 3e-09 1e-06 23.9 0.0 509 692 53 235 11 257 0.75 # 10692 # 11927 # -1 # ID=231_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.515 k119_14076_5 - 459 TIGR00422 TIGR00422 863 4.1e-06 21.9 0.0 1 2 0.018 6.4 1.4 0.0 37 77 26 66 10 102 0.83 # 4887 # 6263 # -1 # ID=119_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.524 k119_14076_5 - 459 TIGR00422 TIGR00422 863 4.1e-06 21.9 0.0 2 2 1.6e-07 5.4e-05 18.2 0.0 484 580 225 320 203 326 0.83 # 4887 # 6263 # -1 # ID=119_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.524 # # Program: hmmsearch # Version: 3.3.1 (Jul 2020) # Pipeline mode: SEARCH # Query file: /tmp/1a5ae51c-8728-4768-9518-9ef535317f09 # Target file: output_checkM/bins/bin.5/genes.faa # Option settings: hmmsearch --domtblout output_checkM/bins/bin.5/hmmer.tree.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1a5ae51c-8728-4768-9518-9ef535317f09 output_checkM/bins/bin.5/genes.faa # Current dir: /yoshitake/test/metagenome~metaWRAP # Date: Wed Jan 19 03:50:10 2022 # [ok]