# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- k119_242217_10 - 124 Ribosom_S12_S23 PF00164.20 122 2.1e-55 183.5 1.6 1 1 5.8e-59 2.3e-55 183.4 1.6 2 122 3 123 2 123 0.99 # 12450 # 12821 # 1 # ID=21_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 k119_242217_11 - 157 Ribosomal_S7 PF00177.16 148 4.1e-62 206.3 0.8 1 1 1.1e-65 4.6e-62 206.1 0.8 1 148 1 149 1 149 0.99 # 12943 # 13413 # 1 # ID=21_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 k119_241530_6 - 276 Ribosomal_L2 PF00181.18 77 2.2e-36 121.8 1.0 1 2 2.8e-39 1.1e-35 119.5 0.9 1 75 42 116 42 118 0.98 # 2345 # 3172 # 1 # ID=15_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.461 k119_241530_6 - 276 Ribosomal_L2 PF00181.18 77 2.2e-36 121.8 1.0 2 2 0.089 3.6e+02 -0.7 0.0 36 54 140 158 132 164 0.81 # 2345 # 3172 # 1 # ID=15_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.461 k119_241530_9 - 230 Ribosomal_S3_C PF00189.15 85 1.2e-34 116.5 0.2 1 1 6.5e-38 2.6e-34 115.4 0.2 2 85 120 202 119 202 0.97 # 3832 # 4521 # 1 # ID=15_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.446 k119_241530_7 - 92 Ribosomal_S19 PF00203.16 81 1.1e-37 125.7 0.2 1 1 3e-41 1.2e-37 125.5 0.2 1 81 3 83 3 83 0.99 # 3193 # 3468 # 1 # ID=15_7;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467 k119_241530_8 - 112 Ribosomal_L22 PF00237.14 105 5.1e-41 137.0 0.4 1 1 1.4e-44 5.8e-41 136.8 0.4 1 105 6 110 6 110 0.98 # 3486 # 3821 # 1 # ID=15_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.449 k119_241530_13 - 123 Ribosomal_L14 PF00238.14 122 1.3e-53 178.0 0.2 1 1 3.6e-57 1.5e-53 177.9 0.2 1 122 1 122 1 122 0.99 # 5425 # 5793 # 1 # ID=15_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.455 k119_241530_10 - 137 Ribosomal_L16 PF00252.13 133 4.3e-51 170.3 1.7 1 1 1.2e-54 4.8e-51 170.1 1.7 1 133 4 132 4 132 0.97 # 4534 # 4944 # 1 # ID=15_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.474 k119_241530_5 - 98 Ribosomal_L23 PF00276.15 92 6.4e-23 78.7 0.1 1 1 1.7e-26 7e-23 78.5 0.1 2 90 8 95 7 97 0.93 # 2040 # 2333 # 1 # ID=15_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 k119_241530_15 - 180 Ribosomal_L5 PF00281.14 56 6.4e-24 81.7 0.1 1 1 2.6e-27 1.1e-23 80.9 0.1 1 56 24 80 24 80 0.99 # 6139 # 6678 # 1 # ID=15_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.426 k119_241530_3 - 211 Ribosomal_L3 PF00297.17 263 1.4e-46 157.2 8.8 1 1 1.1e-48 4.6e-45 152.2 8.8 1 263 9 203 9 203 0.97 # 798 # 1430 # 1 # ID=15_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 k119_242217_4 - 145 Ribosomal_L11 PF00298.14 69 4.2e-31 105.0 0.2 1 1 1.7e-34 7e-31 104.3 0.2 1 69 72 140 72 140 0.99 # 1398 # 1832 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 k119_186247_195 - 90 Ribosomal_S15 PF00312.17 83 1.1e-30 103.3 0.5 1 1 3.2e-34 1.3e-30 103.1 0.5 3 83 8 88 6 88 0.97 # 192614 # 192883 # 1 # ID=26_195;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.404 k119_315248_34 - 246 Ribosomal_S2 PF00318.15 211 2.3e-84 280.0 0.0 1 1 6.4e-88 2.6e-84 279.8 0.0 1 211 9 225 9 225 0.99 # 30861 # 31598 # -1 # ID=29_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.457 k119_241530_20 - 170 Ribosomal_S5 PF00333.15 67 4.8e-30 101.3 4.1 1 1 2.3e-33 9.2e-30 100.3 4.1 1 66 13 78 13 79 0.98 # 8392 # 8901 # 1 # ID=15_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 k119_241530_12 - 88 Ribosomal_S17 PF00366.15 69 8.9e-31 103.9 3.7 1 1 2.6e-34 1.1e-30 103.7 3.7 1 69 12 80 12 80 0.98 # 5138 # 5401 # 1 # ID=15_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 k119_177172_10 - 131 Ribosomal_S9 PF00380.14 121 4.5e-48 160.6 1.9 1 1 1.3e-51 5.1e-48 160.5 1.9 1 121 10 130 10 130 1.00 # 7612 # 8004 # 1 # ID=28_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.466 k119_241530_17 - 131 Ribosomal_S8 PF00410.14 129 1.3e-46 155.7 0.0 1 1 3.7e-50 1.5e-46 155.5 0.0 1 129 5 130 5 130 0.97 # 7080 # 7472 # 1 # ID=15_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.438 k119_241530_26 - 131 Ribosomal_S11 PF00411.14 110 3.4e-47 157.3 0.1 1 1 2e-50 4.1e-47 157.0 0.1 1 110 20 129 20 129 0.99 # 11544 # 11936 # 1 # ID=15_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.468 k119_31923_94 - 312 Ribosomal_S11 PF00411.14 110 0.036 12.4 0.1 1 2 0.074 1.5e+02 0.7 0.0 70 97 118 151 88 159 0.73 # 105267 # 106202 # 1 # ID=16_94;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.434 k119_31923_94 - 312 Ribosomal_S11 PF00411.14 110 0.036 12.4 0.1 2 2 0.0002 0.4 9.0 0.0 46 94 161 210 151 215 0.91 # 105267 # 106202 # 1 # ID=16_94;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.434 k119_242217_6 - 165 Ribosomal_L10 PF00466.15 100 2.7e-26 89.6 0.0 1 1 2.2e-29 4.4e-26 88.9 0.0 5 100 7 101 5 101 0.98 # 2731 # 3225 # 1 # ID=21_6;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.471 k119_141125_205 - 389 Ribosomal_L10 PF00466.15 100 0.033 12.3 0.6 1 2 0.046 94 1.2 0.0 72 97 176 201 156 203 0.73 # 221027 # 222193 # 1 # ID=9_205;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.369 k119_141125_205 - 389 Ribosomal_L10 PF00466.15 100 0.033 12.3 0.6 2 2 0.00045 0.92 7.6 0.0 19 56 301 338 289 339 0.82 # 221027 # 222193 # 1 # ID=9_205;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.369 k119_242217_8 - 1358 RNA_pol_Rpb2_6 PF00562.23 386 2.2e-159 528.4 0.0 1 2 2.7e-05 0.11 9.3 0.0 1 33 666 698 666 705 0.88 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_242217_8 - 1358 RNA_pol_Rpb2_6 PF00562.23 386 2.2e-159 528.4 0.0 2 2 2.2e-159 8.9e-156 516.6 0.0 2 386 720 1279 719 1279 0.99 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_177172_9 - 145 Ribosomal_L13 PF00572.13 128 3.8e-58 193.2 0.1 1 1 1.1e-61 4.4e-58 193.0 0.1 1 127 15 141 15 142 0.99 # 7174 # 7608 # 1 # ID=28_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 k119_241530_4 - 201 Ribosomal_L4 PF00573.17 192 6.7e-62 206.4 1.7 1 1 1.9e-65 7.5e-62 206.2 1.7 2 191 12 197 11 198 0.98 # 1441 # 2043 # 1 # ID=15_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.448 k119_242217_9 - 1409 RNA_pol_Rpb1_2 PF00623.15 166 8.6e-52 173.5 0.0 1 1 3.3e-54 1.3e-50 169.7 0.0 1 165 344 485 344 486 0.96 # 8014 # 12240 # 1 # ID=21_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.456 k119_241530_15 - 180 Ribosomal_L5_C PF00673.16 95 4.1e-43 143.2 0.0 1 1 1.6e-46 6.4e-43 142.6 0.0 1 94 84 177 84 178 0.99 # 6139 # 6678 # 1 # ID=15_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.426 k119_242217_5 - 232 Ribosomal_L1 PF00687.16 220 1.5e-48 163.2 0.1 1 1 4.2e-52 1.7e-48 163.0 0.1 13 220 26 221 3 221 0.90 # 1832 # 2527 # 1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.432 k119_241530_11 - 64 Ribosomal_L29 PF00831.18 58 3.6e-24 82.3 5.0 1 1 9.8e-28 4e-24 82.2 5.0 2 58 4 60 3 60 0.97 # 4944 # 5135 # 1 # ID=15_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 k119_241530_19 - 117 Ribosomal_L18p PF00861.17 119 6.8e-35 118.0 5.0 1 1 1.9e-38 7.6e-35 117.8 5.0 2 119 3 116 2 116 0.95 # 8029 # 8379 # 1 # ID=15_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.487 k119_305814_209 - 74 RNA_pol_Rpb6 PF01192.17 57 1.1e-20 71.2 0.0 1 1 3.3e-24 1.3e-20 71.0 0.0 1 56 7 62 7 63 0.97 # 239123 # 239344 # 1 # ID=30_209;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.441 k119_186247_194 - 320 TruB_N PF01509.13 149 8.1e-54 179.9 0.0 1 1 5.8e-57 1.2e-53 179.4 0.0 1 149 32 185 32 185 0.96 # 191493 # 192452 # 1 # ID=26_194;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.431 k119_311295_89 - 327 TruB_N PF01509.13 149 0.017 13.4 0.0 1 1 1.5e-05 0.029 12.6 0.0 5 49 127 174 124 200 0.82 # 95354 # 96334 # 1 # ID=20_89;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.468 k119_141125_126 - 465 SRP_SPB PF02978.14 104 5.1e-33 111.6 7.5 1 2 1.2e-36 5.1e-33 111.6 7.5 2 104 329 428 328 428 0.96 # 134404 # 135798 # 1 # ID=9_126;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.458 k119_141125_126 - 465 SRP_SPB PF02978.14 104 5.1e-33 111.6 7.5 2 2 0.039 1.6e+02 0.7 3.8 11 31 428 448 428 456 0.87 # 134404 # 135798 # 1 # ID=9_126;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.458 k119_241530_20 - 170 Ribosomal_S5_C PF03719.10 74 6.3e-35 116.4 0.7 1 1 2.4e-38 9.5e-35 115.9 0.7 1 74 88 161 88 161 0.98 # 8392 # 8901 # 1 # ID=15_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451 k119_242217_4 - 145 Ribosomal_L11_N PF03946.9 60 6.8e-33 110.1 0.1 1 1 2.7e-36 1.1e-32 109.4 0.1 1 60 8 67 8 67 0.99 # 1398 # 1832 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 k119_241530_6 - 276 Ribosomal_L2_C PF03947.13 130 4.1e-57 189.7 1.3 1 1 1.7e-60 6.8e-57 189.0 1.3 1 130 124 252 124 252 0.99 # 2345 # 3172 # 1 # ID=15_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.461 k119_242217_8 - 1358 RNA_pol_Rpb2_7 PF04560.15 82 3e-32 108.9 0.0 1 1 1.8e-35 7.1e-32 107.6 0.0 1 81 1281 1356 1281 1357 0.98 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_242217_8 - 1358 RNA_pol_Rpb2_2 PF04561.9 190 5.5e-29 99.0 0.0 1 2 3.2e-12 1.3e-08 32.6 0.0 1 88 154 242 154 248 0.83 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_242217_8 - 1358 RNA_pol_Rpb2_2 PF04561.9 190 5.5e-29 99.0 0.0 2 2 1.8e-21 7.5e-18 62.7 0.0 98 190 362 458 342 458 0.94 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_242217_8 - 1358 RNA_pol_Rpb2_1 PF04563.10 203 3.6e-24 82.9 0.0 1 1 2e-27 8.1e-24 81.8 0.0 2 203 27 513 27 513 0.97 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_242217_8 - 1358 RNA_pol_Rpb2_3 PF04565.11 68 7.8e-30 100.6 0.0 1 1 4.7e-33 1.9e-29 99.4 0.0 1 68 517 586 517 586 0.98 # 3878 # 7951 # 1 # ID=21_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 k119_242217_9 - 1409 RNA_pol_Rpb1_1 PF04997.7 337 1.6e-99 331.5 0.0 1 1 7.9e-103 3.2e-99 330.5 0.0 3 337 16 342 14 342 0.95 # 8014 # 12240 # 1 # ID=21_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.456 k119_242217_9 - 1409 RNA_pol_Rpb1_4 PF05000.12 108 1.4e-18 64.7 0.0 1 1 8.6e-22 3.5e-18 63.5 0.0 2 81 674 754 673 766 0.87 # 8014 # 12240 # 1 # ID=21_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.456 k119_186247_192 - 932 IF-2 PF11987.3 109 7.9e-37 123.6 0.2 1 1 1.9e-40 7.9e-37 123.6 0.2 2 109 715 822 714 822 0.98 # 188141 # 190936 # 1 # ID=26_192;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.472 k119_31418_25 - 879 TIGR00344 TIGR00344 847 0 1018.5 0.1 1 1 0 0 1018.3 0.1 1 847 5 858 5 858 0.99 # 30147 # 32783 # -1 # ID=11_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.445 k119_141125_131 - 643 TIGR00344 TIGR00344 847 5.8e-07 25.9 0.1 1 1 4.1e-10 8.3e-07 25.4 0.1 556 680 72 204 50 256 0.83 # 138886 # 140814 # 1 # ID=9_131;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.444 k119_31923_73 - 985 TIGR00422 TIGR00422 863 0 1182.0 1.1 1 1 0 0 1180.9 1.1 1 862 1 964 1 965 0.97 # 81065 # 84019 # -1 # ID=16_73;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.486 k119_311295_71 - 991 TIGR00422 TIGR00422 863 9.2e-113 375.7 0.0 1 2 9.9e-45 6.7e-42 141.3 0.0 8 243 30 279 24 291 0.90 # 72400 # 75372 # 1 # ID=20_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.447 k119_311295_71 - 991 TIGR00422 TIGR00422 863 9.2e-113 375.7 0.0 2 2 3.2e-72 2.2e-69 232.2 0.1 252 796 343 934 340 953 0.85 # 72400 # 75372 # 1 # ID=20_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.447 k119_186247_175 - 880 TIGR00422 TIGR00422 863 3.4e-85 284.5 17.7 1 6 1.1e-41 7.3e-39 131.2 2.3 2 187 12 181 11 183 0.93 # 167548 # 170187 # -1 # ID=26_175;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469 k119_186247_175 - 880 TIGR00422 TIGR00422 863 3.4e-85 284.5 17.7 2 6 6.1e-06 0.0041 12.9 1.0 342 396 184 235 178 239 0.91 # 167548 # 170187 # -1 # ID=26_175;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469 k119_186247_175 - 880 TIGR00422 TIGR00422 863 3.4e-85 284.5 17.7 3 6 0.00095 0.64 5.7 0.0 199 230 242 271 236 276 0.83 # 167548 # 170187 # -1 # ID=26_175;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469 k119_186247_175 - 880 TIGR00422 TIGR00422 863 3.4e-85 284.5 17.7 4 6 4.1e-14 2.8e-11 40.0 0.0 244 330 321 427 317 435 0.92 # 167548 # 170187 # -1 # ID=26_175;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469 k119_186247_175 - 880 TIGR00422 TIGR00422 863 3.4e-85 284.5 17.7 5 6 8.5e-08 5.7e-05 19.1 0.0 397 520 435 589 430 610 0.68 # 167548 # 170187 # -1 # ID=26_175;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469 k119_186247_175 - 880 TIGR00422 TIGR00422 863 3.4e-85 284.5 17.7 6 6 2.1e-26 1.4e-23 80.6 0.1 525 750 638 839 635 869 0.79 # 167548 # 170187 # -1 # ID=26_175;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469 k119_141125_123 - 727 TIGR00422 TIGR00422 863 5.8e-19 65.4 4.5 1 3 2.8e-11 1.9e-08 30.6 0.0 36 100 12 76 2 103 0.83 # 129389 # 131569 # -1 # ID=9_123;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.443 k119_141125_123 - 727 TIGR00422 TIGR00422 863 5.8e-19 65.4 4.5 2 3 0.013 8.5 2.0 0.0 385 414 216 247 182 276 0.82 # 129389 # 131569 # -1 # ID=9_123;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.443 k119_141125_123 - 727 TIGR00422 TIGR00422 863 5.8e-19 65.4 4.5 3 3 8.9e-12 6e-09 32.2 1.2 512 780 328 604 295 660 0.68 # 129389 # 131569 # -1 # ID=9_123;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.443 k119_3436_167 - 455 TIGR00422 TIGR00422 863 1.6e-11 40.7 1.0 1 2 1.1e-05 0.0075 12.1 0.1 48 76 35 63 25 71 0.92 # 181716 # 183080 # -1 # ID=18_167;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.444 k119_3436_167 - 455 TIGR00422 TIGR00422 863 1.6e-11 40.7 1.0 2 2 2.5e-10 1.7e-07 27.5 0.1 522 586 261 324 236 376 0.84 # 181716 # 183080 # -1 # ID=18_167;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.444 k119_213332_59 - 581 TIGR00422 TIGR00422 863 0.055 9.2 0.0 1 1 0.00013 0.086 8.6 0.0 31 74 116 159 92 170 0.81 # 61554 # 63296 # 1 # ID=25_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 # # Program: hmmsearch # Version: 3.3.1 (Jul 2020) # Pipeline mode: SEARCH # Query file: /tmp/dea5801b-12c7-4ff2-95a3-3826c7d72fc9 # Target file: output_checkM/bins/bin.12/genes.faa # Option settings: hmmsearch --domtblout output_checkM/bins/bin.12/hmmer.tree.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/dea5801b-12c7-4ff2-95a3-3826c7d72fc9 output_checkM/bins/bin.12/genes.faa # Current dir: /yoshitake/test/metagenome~metaWRAP # Date: Wed Jan 19 03:50:43 2022 # [ok]