c2997108/centos7:1-trinity_2.8.5-kallisto_0.46.0-blast_2.9.0-trinotate-3.1.1-R_3-kegg_2 centos:centos6
using docker
+ set -o pipefail
+ '[' T = T ']'
+ flag=-k
++ basename input_1/result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down
++ basename input_2/result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx
+ output=result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx.txt
++ basename input_1/result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down
++ basename input_2/result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx
+ output2=result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx.xlsx
+ docker run -v /data/user2/work/87:/data/user2/work/87 -w /data/user2/work/87 -u root -i --rm c2997108/centos7:1-trinity_2.8.5-kallisto_0.46.0-blast_2.9.0-trinotate-3.1.1-R_3-kegg_2 merge_table.pl -k input_1/result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt input_2/result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx.txt
+ docker run -v /data/user2/work/87:/data/user2/work/87 -w /data/user2/work/87 -u root -i --rm c2997108/centos7:1-trinity_2.8.5-kallisto_0.46.0-blast_2.9.0-trinotate-3.1.1-R_3-kegg_2 java -Xmx1G -jar /usr/local/bin/excel2.jar result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx.txt result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.result.DESeq2.isoforms.count_table.Br.Fatbody.txt.Br.up.Fatbody.down.txt.blastx.xlsx
Start converting
+ post_processing
+ '[' 1 = 1 ']'
+ '[' 'docker run -v $PWD:$PWD -w $PWD -u root -i --rm ' = 'docker run -v $PWD:$PWD -w $PWD -u root -i --rm ' ']'
+ docker run -v /data/user2/work/87:/data/user2/work/87 -w /data/user2/work/87 -u root -i --rm centos:centos6 chmod -R a=rXw .
+ echo 0
+ exit