WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c417536-416593, c416450-416289, c415784-415614, c415257-415084, c414689-414516, c414072-414067, c413904-413858, c413530-413434, c412377-412251)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000055-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 869336 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c877868-877778, c876534-876374, c876224-876112, c875138-875069, c874981-874904, c874237-874097, c873245-873097, c872349-872178, c870397-870316, c869578-869336, c869184-869096)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000108-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1325245 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1324435-1324438, 1324880-1325017, 1325099-1325245, 1325453-1325597, 1325754-1325885, 1325988-1326180, 1326655-1326801, 1326925-1327134, 1327251-1327407, 1327532-1327699, 1327867-1327982)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000164-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1325245 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1324981-1325017, 1325099-1325245, 1325453-1325597, 1325754-1325885, 1325988-1326180, 1326655-1326801, 1326925-1327134, 1327251-1327407, 1327532-1327699, 1327867-1327982)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000164-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1421682 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c1425203-1425103, c1424967-1424856, c1424703-1424602, c1424493-1424443, c1424118-1424059, c1422874-1422791, c1422553-1422443, c1421783-1421682, c1421552-1421452, c1421115-1420967, c1420787-1420698, c1420312-1420194)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000182-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1531218-1531237, 1531946-1531958, 1532994-1533107, 1533359-1533430, 1533549-1533623, 1533763-1533860, 1534095-1534209, 1534447-1534533)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000190-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1561809 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1559794-1559931, 1560119-1560236, 1560504-1560766, 1560980-1561036, 1561330-1561809, 1562434-1562526, 1563956-1564299, 1564800-1564927, 1565117-1565205, 1565369-1565998)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000193-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1565205 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1559794-1559931, 1560119-1560236, 1560504-1560766, 1560980-1561036, 1561330-1561809, 1562434-1562526, 1563956-1564299, 1564800-1564927, 1565117-1565205, 1565369-1565998)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000193-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1806103 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1796442-1796568, 1797266-1797500, 1797587-1797752, 1797849-1797950, 1798061-1798150, 1798404-1798541, 1800961-1801086, 1801220-1801311, 1802282-1802429, 1802687-1802806, 1802904-1803031, 1803124-1803274, 1803447-1803517, 1804908-1805013, 1805280-1805367, 1805470-1805563, 1805799-1805898, 1806005-1806103, 1806466-1806631, 1807566-1807671, 1807758-1807957, 1809132-1809187)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000207-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1912916 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:1903985-1904117, 1904830-1904920, 1907232-1907382, 1908012-1908104, 1908218-1908297, 1908449-1908529, 1909778-1909883, 1910239-1910397, 1912316-1912429, 1912815-1912916, 1913048-1913170, 1913443-1913526)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000213-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c2284523-2284333, c2284060-2283895, c2282600-2282476, c2282322-2282199, c2282033-2281851, c2281536-2281416, c2281376-2281363, c2281304-2281172, c2281096-2280849)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000244-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:2497350-2497387, 2497524-2497531, 2497621-2497746, 2497896-2498032, 2498239-2498408, 2499215-2499371, 2499478-2499587, 2499983-2500184, 2500295-2500419, 2500634-2500751, 2501362-2501449, 2501887-2501993, 2502083-2502211, 2502589-2502780)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000258-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:3448802-3448877, 3449334-3449774, 3450078-3450092, 3451672-3451777, 3452925-3452998, 3453559-3453695, 3454101-3454191, 3454692-3454768, 3454865-3454901, 3455047-3455144, 3455395-3455514, 3455700-3455866, 3456132-3456267, 3456664-3456813, 3456985-3457078, 3457459-3457535, 3458024-3458158, 3458783-3458908, 3459525-3459676, 3460416-3460551, 3461411-3461485)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000305-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4215483 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c4215501-4215483, c4215276-4215155, c4213625-4213417, c4212934-4212874, c4212687-4212592, c4212368-4212204, c4211886-4211761, c4211491-4211271, c4211042-4210999, c4210635-4210226)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000360-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c4702440-4702425, c4702207-4702114, c4701867-4701860, c4701726-4701629)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000411-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5223345 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c5224492-5224289, c5224169-5224103, c5224008-5223969, c5223867-5223345, c5223200-5223123, c5222422-5222372, c5222258-5222120, c5221390-5221354, c5221265-5221154, c5220973-5220884, c5220773-5220714)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000482-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5223345 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c5224492-5224289, c5224169-5224103, c5224008-5223969, c5223867-5223345, c5223200-5223123, c5222422-5222372, c5222258-5222058)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000482-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5666421 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5665167-5665293, 5665396-5665458, 5665533-5665611, 5666069-5666219, 5666353-5666421, 5666559-5668127, 5668240-5668428, 5668548-5668658, 5668746-5668836, 5668930-5669065, 5669267-5669344, 5669511-5669833, 5669975-5670116, 5670250-5670311, 5670523-5670605, 5670731-5670799)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000539-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5666559 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5665167-5665293, 5665396-5665458, 5665533-5665611, 5666069-5666219, 5666353-5666421, 5666559-5668127, 5668240-5668428, 5668548-5668658, 5668746-5668836, 5668930-5669065, 5669267-5669344, 5669511-5669833, 5669975-5670116, 5670250-5670311, 5670523-5670605, 5670731-5670799)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000539-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5737122-5737218, 5739160-5739338, 5739420-5739515, 5739657-5739761, 5739897-5739911, 5740072-5740197, 5740436-5740586, 5740956-5741077, 5741176-5741343)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000547-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5739264-5739515, 5739657-5739761, 5739897-5739911, 5740072-5740197, 5740436-5740586, 5740956-5741077, 5741176-5741343)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000547-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5750405 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5748378-5748455, 5748556-5748647, 5748752-5748920, 5749004-5749112, 5749420-5749556, 5749776-5749873, 5749972-5750008, 5750112-5750205, 5750288-5750405, 5750502-5750644, 5750782-5750849)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000550-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5750405 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5749058-5749112, 5749420-5749556, 5749776-5749873, 5749972-5750008, 5750112-5750205, 5750288-5750405, 5750502-5750644, 5750782-5750849)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000550-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5771650 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5769929-5770858, 5771561-5771650, 5771870-5772256)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000555-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5771650 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5769586-5769610, 5769924-5770858, 5771561-5771650, 5771870-5772256)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000555-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5989398 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:5989030-5989141, 5989246-5989398, 5989563-5989687, 5989791-5989930, 5990022-5990241)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000589-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6279705 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c6281125-6281036, c6280901-6280766, c6280628-6280540, c6280378-6280184, c6280069-6279929, c6279806-6279705, c6279340-6279155, c6279024-6278950, c6278820-6278720, c6278572-6278443, c6278334-6278209)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000635-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6402239 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c6405616-6405532, c6405371-6405229, c6405114-6405013, c6404900-6404755, c6404667-6404577, c6404434-6404327, c6404211-6404119, c6403999-6403832, c6403746-6403617, c6403488-6403423, c6403294-6403092, c6402997-6402913, c6402823-6402762, c6402656-6402520, c6402342-6402239, c6402075-6401978, c6401874-6401724, c6401601-6401393, c6401296-6401199, c6401074-6400989, c6400832-6400751, c6400279-6400133, c6400035-6399804, c6399600-6399511)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000650-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:7766386-7766503, 7766841-7766923, 7767184-7767392, 7767565-7767748, 7767850-7767942, 7768532-7768685, 7769168-7769349, 7769500-7769581, 7770057-7770157, 7770638-7770643, 7771376-7771531, 7771793-7771905, 7772286-7772373, 7772533-7772684, 7773022-7773077, 7773241-7773290, 7773406-7773510, 7773661-7773761, 7773921-7773989, 7774145-7774391)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000817-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7769349 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:7766386-7766503, 7766841-7766923, 7767184-7767392, 7767565-7767748, 7767850-7767942, 7768532-7768685, 7769168-7769349, 7769500-7769581, 7770057-7770157, 7770638-7770643, 7771376-7771531, 7771793-7771905, 7772286-7772373, 7772533-7772684, 7773022-7773077, 7773241-7773290, 7773406-7773510, 7773661-7773761, 7773921-7773989, 7774145-7774391)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000817-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:8455659-8455744, 8455884-8455944, 8456182-8456361, 8456821-8456932, 8457238-8457341, 8457699-8457824, 8460256-8460451, 8461212-8461982, 8462464-8462552, 8463045-8463348, 8463516-8463637, 8465780-8465899, 8466265-8466429, 8466641-8466838, 8467282-8467428, 8468142-8468430, 8470350-8470456, 8471816-8471906, 8472073-8472220, 8472390-8472607, 8472901-8473016, 8473292-8473305, 8473782-8473907, 8474554-8474635, 8474891-8474989, 8475375-8475521, 8475736-8475817, 8476114-8476260, 8476766-8476947)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000876-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8647950 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c8648042-8647950, c8646957-8646818, c8645479-8645415, c8645315-8645236, c8645117-8644991, c8644830-8644755, c8644438-8644314, c8643815-8643730, c8643643-8643563, c8643304-8643149)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000899-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8764711 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c8764800-8764711, c8764586-8764482, c8764351-8764259, c8764170-8764084, c8763975-8763889, c8763774-8763703, c8763548-8763441, c8763341-8763235, c8763141-8763066, c8762752-8762558, c8762223-8762138, c8761578-8761578)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000918-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8802981 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:8800574-8800680, 8801107-8801381, 8801708-8801844, 8802019-8802132, 8802349-8802429, 8802598-8802720, 8802892-8802981, 8803094-8803294, 8803434-8803560, 8803644-8803758, 8803845-8804014, 8804154-8804284, 8804400-8804525, 8804847-8804903, 8805015-8805134, 8805317-8805484)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000925-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8995648 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c8999020-8998903, c8998570-8998416, c8997709-8997488, c8997303-8997190, c8996457-8996365, c8995953-8995876, c8995763-8995648, c8995525-8995029, c8994432-8994304, c8994138-8993956, c8993776-8993246, c8992977-8992447, c8992324-8992128, c8992034-8991954, c8991863-8991785, c8991605-8991366, c8991232-8991063)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000939-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9295758 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:9294819-9294831, 9294941-9294984, 9295272-9295376, 9295471-9295587, 9295675-9295758, 9295923-9296058, 9296204-9296307, 9296480-9296624, 9296710-9296797, 9296880-9297057, 9297131-9297273, 9297368-9297504, 9297577-9297743, 9297839-9298013, 9298118-9298185)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_000970-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10427276 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c10429821-10429703, c10429619-10429532, c10429453-10429324, c10429199-10429124, c10429012-10428941, c10428826-10428700, c10428606-10428523, c10428378-10428310, c10428232-10428078, c10427955-10427868, c10427636-10427528, c10427421-10427276, c10427190-10427146)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001058-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c>10639542-10639410, c10638229-10638092, c10637658-10637515, c10637193-10637065, c10636593-10636468, c10635800-10635684, c10635049-10634921, c10634185-10634062, c10633204-10632847)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001074-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10639542 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c>10639542-10639410, c10638229-10638092, c10637658-10637515, c10637193-10637065, c10636593-10636468, c10635800-10635684, c10635049-10634921, c10634185-10634062, c10633204-10632847)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001074-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10651450 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c10652959-10652833, c10651866-10651743, c10651579-10651450, c10650454-10650262, c10648633-10648424, c10647463-10647353, c10645937-10645836, c10644463-<10644323)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001075-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c10750911-10750842, c10750811-10750710, c10749879-10749815, c10747676-10747662, c10747465-10747439)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001085-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11096246 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:11091112-11091193, 11093435-11093980, 11094300-11094599, 11095477-11095752, 11095952-11096246, 11096488-11096500)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001127-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11098938 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:11098831-11098938, 11099102-11099166, 11099292-11099391, 11099630-11099891, 11100055-11100145, 11100340-11100405, 11100575-11100761)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001128-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11098938 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:11097825-11098049, 11098307-11098381, 11098499-11098608, 11098815-11098938, 11099102-11099166, 11099292-11099391, 11099630-11099891, 11100055-11100145, 11100340-11100405, 11100575-11100761)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001128-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:11325991-11326049, 11326164-11326235, 11326491-11326526, 11326866-11326946, 11327113-11327148, 11327342-11327377, 11327751-11327831, 11327918-11327953, 11328324-11328368, 11328878-11328913, 11329297-11329336, 11329906-11330010, 11330130-11330195, 11330369-11330404, 11330495-11330530, 11330901-11330948, 11331058-11331093, 11331233-11331358, 11331605-11331768, 11331872-11331907, 11332145-11332231, 11332362-11332433, 11332520-11332564, 11333210-11333245, 11333554-11333589, 11334445-11334480, 11334781-11334813, 11334919-11334981, 11335159-11335194, 11335405-11335441, 11335614-11335682, 11336102-11336137, 11336402-11336446, 11336537-11336572, 11336702-11336890, 11337042-11337167, 11337345-11337416, 11337505-11337540, 11337678-11337737, 11337875-11337919, 11338608-11338643, 11...] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001157-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11686776 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:11684233-11684247, 11685024-11685075, 11685274-11685374, 11685459-11685540, 11685635-11685693, 11685872-11685917, 11686026-11686080, 11686252-11686378, 11686611-11686776, 11686886-11686923, 11687040-11687186, 11687501-11687600, 11687764-11687774)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001199-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11750681 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:11749413-11749638, 11750017-11750681, 11750905-11751225)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001207-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12148944 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12149481-12149428, c12149182-12149099, c12149018-12148944, c12148851-12148821, c12148543-12148456, c12148342-12148303, c12148222-12148136, c12148038-12147949, c12147765-12147700, c12147573-12147433)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001255-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12335521 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12339040-12338909, c12338793-12338691, c12338548-12338334, c12338030-12337818, c12337657-12337509, c12337403-12337334, c12336857-12336603, c12336115-12335990, c12335616-12335521, c12335369-12335282, c12335189-12335044, c12334368-12334366)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001279-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12564358 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:12559867-12559994, 12560366-12560490, 12560643-12560827, 12562392-12562505, 12564257-12564358, 12564466-12564582)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001304-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12632635-12632515, c12632419-12632407, c12632159-12632027, c12631499-12631200)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001313-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12754529 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:12751445-12751525, 12753542-12753592, 12753939-12754041, 12754198-12754332, 12754473-12754529, 12756068-12756183)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001329-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:12773985-12774116, 12775639-12775650, 12775806-12775913, 12776026-12776166, 12776434-12776596, 12776769-12776857, 12776973-12777116, 12777210-12777290, 12777396-12777500)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001332-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792965-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12788297)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792965-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12788297)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12791871-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12788297)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792965-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788588)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792965-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788588)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792197-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12788297)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T4]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792197-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12788297)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T4]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792965-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789538)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T5]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12792965-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789538)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001335-T5]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12798315 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12800851-12800807, c12800696-12800538, c12800215-12800034, c12799882-12799720, c12799618-12799499, c12799366-12799172, c12798756-12798575, c12798439-12798315, c12798186-12798036, c12797955-12797835, c12797685-12797330, c12796566-12796428, c12796266-12796087, c12795966-12795802, c12795706-12795251, c12795159-12795081, c12794975-12794794, c12794672-12794400, c12794216-12794079)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_046229-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12798315 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c12800851-12800807, c12800696-12800538, c12800215-12800034, c12799882-12799720, c12799618-12799499, c12799366-12799172, c12798756-12798575, c12798439-12798315, c12798186-12798036, c12797955-12797835, c12797685-12797330, c12796566-12796428, c12796266-12796087, c12795966-12795802, c12795706-12795251, c12795159-12795025)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_046229-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:13377046-13377054, 13378258-13378264, 13378915-13379121, 13380283-13380377)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001390-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13925677 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c13926384-13926174, c13926063-13925942, c13925821-13925677, c13925529-13925379, c13925263-13925092, c13924715-13924620, c13924470-13924258, c13924104-13923961, c13923847-13923701, c13923595-13923502, c13923323-13923001, c13922862-13922740, c13922517-13922438, c13922343-13922256)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001443-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13930120 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c13936715-13936611, c13936215-13936063, c13935963-13935847, c13935758-13935690, c13935563-13935465, c13935358-13935273, c13935167-13935076, c13934996-13934780, c13934700-13934559, c13934444-13934359, c13934052-13933773, c13933673-13933568, c13933384-13932745, c13932602-13932391, c13932194-13932009, c13931908-13931751, c13931657-13931412, c13931294-13931149, c13931018-13930861, c13930566-13930383, c13930288-13930120, c13929894-13929696, c13929599-13929444, c13928434-13928367, c13928225-13928012, c13927932-13927769)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_046230-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13928012 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c13936715-13936611, c13936215-13936063, c13935963-13935847, c13935758-13935690, c13935563-13935465, c13935358-13935273, c13935167-13935076, c13934996-13934780, c13934700-13934559, c13934444-13934359, c13934052-13933773, c13933673-13933568, c13933384-13932745, c13932602-13932391, c13932194-13932009, c13931908-13931751, c13931657-13931412, c13931294-13931149, c13931018-13930861, c13930566-13930383, c13930288-13930120, c13929894-13929696, c13929599-13929444, c13928434-13928367, c13928225-13928012, c13927932-13927769)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_046230-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14215634 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:14214860-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14216893)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001466-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14215668 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:14214860-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14216893)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001466-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14215634 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:14214860-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14216886, 14216984-14217074)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001466-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14215668 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:14214860-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14216886, 14216984-14217074)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001466-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14259546 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c14260848-14260726, c14260636-14260563, c14260459-14260332, c14260196-14259922, c14259747-14259546, c14259367-14259204, c14258678-14258540, c14258203-14258027, c14257878-14257604, c14256888-14256808, c14256676-14256487, c14256225-14256140, c14255963-14255827, c14255626-14255548, c14255443-14255323, c14255008-14254676, c14254574-14254401, c14254233-14254043)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001474-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14390480 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:14382745-14382948, 14383103-14383246, 14383332-14383488, 14383590-14383617, 14383705-14383819, 14383911-14384003, 14384095-14384158, 14384257-14384355, 14384462-14384565, 14384650-14384788, 14384913-14385031, 14385121-14385270, 14385558-14385728, 14385815-14386121, 14386199-14386272, 14386355-14386442, 14386547-14386664, 14386748-14386871, 14386954-14387090, 14387186-14387441, 14387569-14387811, 14387899-14388075, 14388253-14388398, 14388499-14388589, 14388678-14389067, 14389148-14389274, 14389475-14389593, 14389690-14389886, 14389990-14390173, 14390315-14390480, 14390574-14390698, 14390811-14391119, 14391218-14391421, 14391529-14391654, 14391779-14391949, 14392083-14392187, 14392289-14392384, 14392499-14392630, 14392783-14392803)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001490-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14536956 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c14538847-14538823, c14538726-14538632, c14538483-14538240, c14538007-14537919, c14537630-14537378, c14537246-14537149, c14537057-14536956, c14536798-14536639, c14536488-14536406, c14536287-14536161, c14536074-14535961, c14535802-14535760, c14535648-14535581, c14535475-14535336, c14535235-14535126, c14535003-14534828, c14534659-14534481, c14534393-14534169, c14534034-14533906, c14533748-14533608)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001513-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:15111145-15111202, 15111719-15111750, 15112177-15112314, 15113256-15113325, 15114095-15114102, 15114584-15114837, 15115528-15115681, 15116206-15116227, 15117421-15117512, 15118265-15118457, 15119481-15119783, 15122074-15122241, 15125059-15125152, 15125267-15125354, 15125979-15126122, 15127703-15127841, 15129424-15129512, 15129737-15129838)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001569-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c16340753-16340722, c16339314-16339237, c16337937-16337832, c16337187-16337057, c16336892-16336886, c16336458-16336408, c16335949-16335857, c16334165-16334037, c16333697-16333591, c16332593-16332437, c16331739-16331566)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001684-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16480812 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c16488188-16487956, c16487658-16487559, c16486907-16486786, c16484930-16484801, c16484451-16484372, c16484169-16484006, c16483389-16483331, c16482175-16482143, c16481727-16481669, c16481226-16481160, c16480862-16480812, c16480437-16480261, c16480040-16479909, c16479702-16479610, c16479462-16479401, c16479070-16478994, c16478810-16478747, c16478497-16478344)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001696-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16480812 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c16484054-16484006, c16483389-16483331, c16482175-16482143, c16481727-16481669, c16481226-16481160, c16480862-16480812, c16480437-16480261, c16480040-16479909, c16479702-16479610, c16479462-16479401, c16479070-16478994, c16478810-16478747, c16478497-16478344)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001696-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:16537755-16537779, 16539471-16539927, 16542135-16542214, 16543434-16543532, 16544658-16544671, 16544759-16544875, 16545444-16545504, 16548349-16548386, 16548590-16548653, 16549081-16549299, 16550536-16550655, 16551380-16551456)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001706-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16755146 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c16755274-16755146, c16754843-16754691, c16754475-16754393, c16754190-16753993, c16752189-16752136, c16751920-16751762, c16751649-16751598)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001731-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c17602616-17602590, c17601122-17600965, c17600612-17600541, c17599151-17599139, c17598627-17598494, c17597691-17597436, c17595438-17595070, c17593504-17593412, c17592036-17591821, c17591628-17591512)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001813-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18340782 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:18339975-18340130, 18340252-18340372, 18340652-18340782, 18341356-18341529)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001897-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19381329 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:19377139-19377846, 19377942-19378133, 19378287-19378468, 19378562-19378685, 19378907-19379026, 19379974-19380060, 19380695-19380879, 19381176-19381329, 19381413-19381596, 19381771-19381889, 19382671-19382796, 19385092-19385249, 19385465-19385536, 19385658-19385828, 19385930-19385972, 19386169-19386199, 19386448-19386551, 19386818-19387189)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_001997-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c20135395-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_002056-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20135350 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c20135395-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_002056-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20135266 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c20135395-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_002056-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20134560 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c20135395-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_002056-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:c20511093-20510985, c20510007-20509839, c20508546-20508417, c20507151-20507024, c20503849-20503706, c20500457-20500452, c20499348-20499315, c20498695-20498654, c20498021-20497890, c20497505-20497416, c20497274-20497098, c20496634-20496530)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_002088-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20779805 of lcl|scaffold_1 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1:20775937-20776220, 20777572-20777699, 20777823-20777953, 20778080-20778206, 20778779-20778924, 20779338-20779399, 20779659-20779805, 20780102-20780219, 20780477-20780650, 20780963-20781121, 20781822-20782046, 20782525-20782608, 20783037-20783131, 20783298-20783480, 20785956-20786155, 20786552-20786806, 20788902-20788972, 20789699-20789814, 20790311-20790460, 20791590-20791693, 20792585-20792673, 20793060-20793185)] [lcl|scaffold_1: delta, dna len= 22408856] -> [gnl|ncbi|FUN_002113-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 869336 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c877868-877778, c876534-876374, c876224-876112, c875138-875069, c874981-874904, c874237-874097, c873245-873097, c872349-872178, c870397-870316, c869578-869336, c869184-868749)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1325245 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:1324283-1324438, 1324880-1325017, 1325099-1325245, 1325453-1325597, 1325754-1325885, 1325988-1326180, 1326655-1326801, 1326925-1327134, 1327251-1327407, 1327532-1327699, 1327867-1328350)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1325245 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:1324615-1324661, 1324880-1325017, 1325099-1325245, 1325453-1325597, 1325754-1325885, 1325988-1326180, 1326655-1326801, 1326925-1327134, 1327251-1327407, 1327532-1327699, 1327867-1327982)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1421682 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c1425278-1425103, c1424967-1424856, c1424703-1424602, c1424493-1424443, c1424118-1424059, c1422874-1422791, c1422553-1422443, c1421783-1421682, c1421552-1421452, c1421115-1420967, c1420787-1420698, c1420312-1420168)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1561809 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:1559127-1559284, 1559671-1559931, 1560119-1560236, 1560504-1560766, 1560980-1561036, 1561330-1561809, 1562434-1562526, 1563956-1564299, 1564800-1564927, 1565117-1565205, 1565369-1566865)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1565205 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:1559127-1559284, 1559671-1559931, 1560119-1560236, 1560504-1560766, 1560980-1561036, 1561330-1561809, 1562434-1562526, 1563956-1564299, 1564800-1564927, 1565117-1565205, 1565369-1566865)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1806103 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:1795607-1795722, 1796423-1796568, 1797266-1797500, 1797587-1797752, 1797849-1797950, 1798061-1798150, 1798404-1798541, 1800961-1801086, 1801220-1801311, 1802282-1802429, 1802687-1802806, 1802904-1803031, 1803124-1803274, 1803447-1803517, 1804908-1805013, 1805280-1805367, 1805470-1805563, 1805799-1805898, 1806005-1806103, 1806466-1806631, 1807566-1807671, 1807758-1807957, 1809132-1809519)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1912916 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:1903985-1904117, 1904830-1904920, 1907232-1907382, 1908012-1908104, 1908218-1908297, 1908449-1908529, 1909778-1909883, 1910239-1910397, 1912316-1912429, 1912815-1912916, 1913048-1913170, 1913443-1913526)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4112232 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:4092894-4092902, 4092961-4093158, 4093688-4094686, 4094930-4095200, 4096615-4096821, 4097158-4097281, 4098166-4098259, 4098964-4099050, 4099455-4099571, 4102507-4102605, 4102718-4102866, 4103226-4103364, 4103780-4103902, 4104355-4104552, 4105106-4105959, 4106259-4106508, 4107104-4107193, 4107564-4107788, 4109502-4109672, 4110083-4110260, 4110794-4110910, 4111212-4111478, 4111813-4112063, 4112184-4112232, 4112411-4113378)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4215483 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c4215694-4215483, c4215276-4215155, c4213625-4213417, c4212934-4212874, c4212687-4212592, c4212368-4212204, c4211886-4211761, c4211491-4211271, c4211042-4210999, c4210635-4209704)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4586276 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:4586220-4586276, 4586827-4586958, 4587078-4587105, 4587206-4587292, 4587478-4587682, 4587815-4587874, 4587987-4588194)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5223345 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c5224561-5224289, c5224169-5224103, c5224008-5223969, c5223867-5223345, c5223200-5223123, c5222422-5222372, c5222258-5222120, c5221390-5221354, c5221265-5221154, c5220973-5220884, c5220773-5220705)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5223345 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c5224561-5224289, c5224169-5224103, c5224008-5223969, c5223867-5223345, c5223200-5223123, c5222422-5222372, c5222258-5222053)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5666421 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5664863-5664884, 5665138-5665293, 5665396-5665458, 5665533-5665611, 5666069-5666219, 5666353-5666421, 5666559-5668127, 5668240-5668428, 5668548-5668658, 5668746-5668836, 5668930-5669065, 5669267-5669344, 5669511-5669833, 5669975-5670116, 5670250-5670311, 5670523-5670605, 5670731-5671195)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5666559 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5664863-5664884, 5665138-5665293, 5665396-5665458, 5665533-5665611, 5666069-5666219, 5666353-5666421, 5666559-5668127, 5668240-5668428, 5668548-5668658, 5668746-5668836, 5668930-5669065, 5669267-5669344, 5669511-5669833, 5669975-5670116, 5670250-5670311, 5670523-5670605, 5670731-5671195)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5750405 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5748036-5748455, 5748556-5748647, 5748752-5748920, 5749004-5749112, 5749420-5749556, 5749776-5749873, 5749972-5750008, 5750112-5750205, 5750288-5750405, 5750502-5750644, 5750782-5750994)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5750405 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5748918-5749112, 5749420-5749556, 5749776-5749873, 5749972-5750008, 5750112-5750205, 5750288-5750405, 5750502-5750644, 5750782-5750994)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5771650 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5769364-5769610, 5769883-5770858, 5771561-5771650, 5771870-5773687)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5771650 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5769364-5769610, 5769924-5770858, 5771561-5771650, 5771870-5773687)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5989398 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:5988961-5989141, 5989246-5989398, 5989563-5989687, 5989791-5989930, 5990022-5990516)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6279705 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c6281208-6281036, c6280901-6280766, c6280628-6280540, c6280378-6280184, c6280069-6279929, c6279806-6279705, c6279340-6279155, c6279024-6278950, c6278820-6278720, c6278572-6278443, c6278334-6277810)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6402239 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c6406403-6406313, c6405622-6405532, c6405371-6405229, c6405114-6405013, c6404900-6404755, c6404667-6404577, c6404434-6404327, c6404211-6404119, c6403999-6403832, c6403746-6403617, c6403488-6403423, c6403294-6403092, c6402997-6402913, c6402823-6402762, c6402656-6402520, c6402342-6402239, c6402075-6401978, c6401874-6401724, c6401601-6401393, c6401296-6401199, c6401074-6400989, c6400832-6400751, c6400279-6400133, c6400035-6399804, c6399600-6398772)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7769349 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:7766352-7766503, 7766841-7766923, 7767184-7767392, 7767565-7767748, 7767850-7767942, 7768532-7768685, 7769168-7769349, 7769500-7769581, 7770057-7770157, 7770638-7770643, 7771376-7771531, 7771793-7771905, 7772286-7772373, 7772533-7772684, 7773022-7773077, 7773241-7773290, 7773406-7773510, 7773661-7773761, 7773921-7773989, 7774145-7774987)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8647950 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c8648062-8647950, c8646957-8646818, c8645479-8645415, c8645315-8645236, c8645117-8644991, c8644830-8644755, c8644438-8644314, c8643815-8643730, c8643643-8643563, c8643304-8642630)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8764711 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c8765631-8765555, c8764821-8764711, c8764586-8764482, c8764351-8764259, c8764170-8764084, c8763975-8763889, c8763774-8763703, c8763548-8763441, c8763341-8763235, c8763141-8763066, c8762752-8762558, c8762223-8762138, c8761578-8761195)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8802981 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:8800574-8800680, 8801107-8801381, 8801708-8801844, 8802019-8802132, 8802349-8802429, 8802598-8802720, 8802892-8802981, 8803094-8803294, 8803434-8803560, 8803644-8803758, 8803845-8804014, 8804154-8804284, 8804400-8804525, 8804847-8804903, 8805015-8805134, 8805317-8806792)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8995648 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c8999020-8998903, c8998570-8998416, c8997709-8997488, c8997303-8997190, c8996457-8996365, c8995953-8995876, c8995763-8995648, c8995525-8995029, c8994432-8994304, c8994138-8993956, c8993776-8993246, c8992977-8992447, c8992324-8992128, c8992034-8991954, c8991863-8991785, c8991605-8991366, c8991232-8991063)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9295758 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:9294807-9294831, 9294941-9294984, 9295272-9295376, 9295471-9295587, 9295675-9295758, 9295923-9296058, 9296204-9296307, 9296480-9296624, 9296710-9296797, 9296880-9297057, 9297131-9297273, 9297368-9297504, 9297577-9297743, 9297839-9298013, 9298118-9298897)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10427276 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c10430200-10430159, c10429852-10429703, c10429619-10429532, c10429453-10429324, c10429199-10429124, c10429012-10428941, c10428826-10428700, c10428606-10428523, c10428378-10428310, c10428232-10428078, c10427955-10427868, c10427636-10427528, c10427421-10427276, c10427190-10427142)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c>10639544-10639410, c10638229-10638092, c10637658-10637515, c10637193-10637065, c10636593-10636468, c10635800-10635684, c10635049-10634921, c10634185-10634062, c10633204-10631905)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10651450 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c10652959-10652833, c10651866-10651743, c10651579-10651450, c10650454-10650262, c10648633-10648424, c10647463-10647353, c10645937-10645836, c10644463-<10644323)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11096246 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:11090726-11091193, 11093435-11093980, 11094300-11094599, 11095477-11095752, 11095952-11096246, 11096488-11097513)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11098938 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:11098762-11098938, 11099102-11099166, 11099292-11099391, 11099630-11099891, 11100055-11100145, 11100340-11100405, 11100575-11100906)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11098938 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:11097752-11098049, 11098307-11098381, 11098499-11098608, 11098815-11098938, 11099102-11099166, 11099292-11099391, 11099630-11099891, 11100055-11100145, 11100340-11100405, 11100575-11100907)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11686776 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:11684233-11684247, 11685024-11685075, 11685274-11685374, 11685459-11685540, 11685635-11685693, 11685872-11685917, 11686026-11686080, 11686252-11686378, 11686611-11686776, 11686886-11686923, 11687040-11687186, 11687501-11687600, 11687764-11687774)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11750681 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:11749413-11749638, 11750017-11750681, 11750905-11751225)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12148944 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12149481-12149428, c12149182-12149099, c12149018-12148944, c12148851-12148821, c12148543-12148456, c12148342-12148303, c12148222-12148136, c12148038-12147949, c12147765-12147700, c12147573-12147433)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12335521 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12339921-12339802, c12339066-12338909, c12338793-12338691, c12338548-12338334, c12338030-12337818, c12337657-12337509, c12337403-12337334, c12336857-12336603, c12336115-12335990, c12335616-12335521, c12335369-12335282, c12335189-12335044, c12334368-12333784)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12564358 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:12559831-12559994, 12560366-12560490, 12560643-12560827, 12562392-12562505, 12564257-12564358, 12564466-12564891)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12585456 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:12581658-12581828, 12582170-12582240, 12583100-12583313, 12583446-12583721, 12583814-12585456, 12585497-12585968)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12585497 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:12581658-12581828, 12582170-12582240, 12583100-12583313, 12583446-12583721, 12583814-12585456, 12585497-12585968)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12754529 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:12751445-12751525, 12753542-12753592, 12753939-12754041, 12754198-12754332, 12754473-12754529, 12756068-12756183)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12792149-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12792149-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792317-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792317-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789544, c12788980-12788885, c12788806-12788666, c12788560-12788431, c12788331-12787773)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791985 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789509)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12791515 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12793079-12792909, c12792506-12792394, c12792303-12792194, c12792094-12791985, c12791892-12791785, c12791667-12791515, c12791414-12791284, c12790848-12790683, c12790558-12790424, c12789926-12789787, c12789658-12789509)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12798315 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12801158-12801114, c12800926-12800807, c12800696-12800538, c12800215-12800034, c12799882-12799720, c12799618-12799499, c12799366-12799172, c12798756-12798575, c12798439-12798315, c12798186-12798036, c12797955-12797835, c12797685-12797330, c12796566-12796428, c12796266-12796087, c12795966-12795802, c12795706-12795251, c12795159-12795081, c12794975-12794794, c12794672-12794400, c12794216-12793367)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12798315 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c12801158-12801114, c12800926-12800807, c12800696-12800538, c12800215-12800034, c12799882-12799720, c12799618-12799499, c12799366-12799172, c12798756-12798575, c12798439-12798315, c12798186-12798036, c12797955-12797835, c12797685-12797330, c12796566-12796428, c12796266-12796087, c12795966-12795802, c12795706-12795251, c12795159-12794794, c12794672-12794400, c12794216-12793391)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13925677 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c13927390-13927210, c13926493-13926174, c13926063-13925942, c13925821-13925677, c13925529-13925379, c13925263-13925092, c13924715-13924620, c13924470-13924258, c13924104-13923961, c13923847-13923701, c13923595-13923502, c13923323-13923001, c13922862-13922740, c13922517-13922438, c13922343-13921472)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13930120 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c13936743-13936611, c13936215-13936063, c13935963-13935847, c13935758-13935690, c13935563-13935465, c13935358-13935273, c13935167-13935076, c13934996-13934780, c13934700-13934559, c13934444-13934359, c13934052-13933773, c13933673-13933568, c13933384-13932745, c13932602-13932391, c13932194-13932009, c13931908-13931751, c13931657-13931412, c13931294-13931149, c13931018-13930861, c13930566-13930383, c13930288-13930120, c13929894-13929696, c13929599-13929444, c13928434-13928367, c13928225-13928012, c13927932-13927684)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13928012 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c13936743-13936611, c13936215-13936063, c13935963-13935847, c13935758-13935690, c13935563-13935465, c13935358-13935273, c13935167-13935076, c13934996-13934780, c13934700-13934559, c13934444-13934359, c13934052-13933773, c13933673-13933568, c13933384-13932745, c13932602-13932391, c13932194-13932009, c13931908-13931751, c13931657-13931412, c13931294-13931149, c13931018-13930861, c13930566-13930383, c13930288-13930120, c13929894-13929696, c13929599-13929444, c13928434-13928367, c13928225-13928012, c13927932-13927684)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14215634 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:14214835-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14217193)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14215668 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:14214835-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14217193)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14215634 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:14214835-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14216886, 14216984-14217088)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14215668 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:14214835-14215153, 14215386-14215477, 14215602-14215634, 14215668-14215735, 14215892-14216029, 14216149-14216230, 14216343-14216457, 14216632-14216730, 14216810-14216886, 14216984-14217088)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14259546 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c14261781-14261666, c14260903-14260726, c14260636-14260563, c14260459-14260332, c14260196-14259922, c14259747-14259546, c14259367-14259204, c14258678-14258540, c14258203-14258027, c14257878-14257604, c14256888-14256808, c14256676-14256487, c14256225-14256140, c14255963-14255827, c14255626-14255548, c14255443-14255323, c14255008-14254676, c14254574-14254401, c14254233-14253741)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14390480 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:14381868-14381933, 14382116-14382165, 14382733-14382948, 14383103-14383246, 14383332-14383488, 14383590-14383617, 14383705-14383819, 14383911-14384003, 14384095-14384158, 14384257-14384355, 14384462-14384565, 14384650-14384788, 14384913-14385031, 14385121-14385270, 14385558-14385728, 14385815-14386121, 14386199-14386272, 14386355-14386442, 14386547-14386664, 14386748-14386871, 14386954-14387090, 14387186-14387441, 14387569-14387811, 14387899-14388075, 14388253-14388398, 14388499-14388589, 14388678-14389067, 14389148-14389274, 14389475-14389593, 14389690-14389886, 14389990-14390173, 14390315-14390480, 14390574-14390698, 14390811-14391119, 14391218-14391421, 14391529-14391654, 14391779-14391949, 14392083-14392187, 14392289-14392384, 14392499-14392630, 14392783-14392901)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14536956 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c14541647-14541573, c14538877-14538823, c14538726-14538632, c14538483-14538240, c14538007-14537919, c14537630-14537378, c14537246-14537149, c14537057-14536956, c14536798-14536639, c14536488-14536406, c14536287-14536161, c14536074-14535961, c14535802-14535760, c14535648-14535581, c14535475-14535336, c14535235-14535126, c14535003-14534828, c14534659-14534481, c14534393-14534169, c14534034-14533906, c14533748-14532638)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15888366 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:15888175-15888366, 15889038-15889156, 15889444-15890146)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16480812 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c16488419-16487956, c16487658-16487559, c16486907-16486786, c16484930-16484801, c16484451-16484372, c16484169-16484006, c16483389-16483331, c16482175-16482143, c16481727-16481669, c16481226-16481160, c16480862-16480812, c16480437-16480261, c16480040-16479909, c16479702-16479610, c16479462-16479401, c16479070-16478994, c16478810-16478747, c16478497-16477935)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16480812 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c16485221-16484801, c16484451-16484372, c16484169-16484006, c16483389-16483331, c16482175-16482143, c16481727-16481669, c16481226-16481160, c16480862-16480812, c16480437-16480261, c16480040-16479909, c16479702-16479610, c16479462-16479401, c16479070-16478994, c16478810-16478747, c16478497-16477935)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16755146 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c16755367-16755146, c16754843-16754691, c16754475-16754393, c16754190-16753993, c16752189-16752136, c16751920-16751762, c16751649-16751149)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18340782 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:18339632-18339786, 18339973-18340130, 18340252-18340372, 18340652-18340782, 18341356-18342042)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18749978 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c18756938-18756900, c18755554-18755491, c18754933-18754721, c18754638-18754544, c18753765-18753559, c18752966-18752887, c18752599-18752521, c18751988-18751917, c18751807-18751745, c18751219-18749978, c18749947-18749380)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19381329 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:19377139-19377846, 19377942-19378133, 19378287-19378468, 19378562-19378685, 19378907-19379026, 19379974-19380060, 19380695-19380879, 19381176-19381329, 19381413-19381596, 19381771-19381889, 19382671-19382796, 19385092-19385249, 19385465-19385536, 19385658-19385828, 19385930-19385972, 19386169-19386199, 19386448-19386551, 19386818-19387189)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20135350 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c20137482-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20135266 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c20137482-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20134560 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:c20137482-20135350, c20135277-20135266, c20134693-20134560, c20134535-20134515)] [lcl|scaffold_1: delta, dna len= 22408856]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20779805 of lcl|scaffold_1 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1:20775935-20776220, 20777572-20777699, 20777823-20777953, 20778080-20778206, 20778779-20778924, 20779338-20779399, 20779659-20779805, 20780102-20780219, 20780477-20780650, 20780963-20781121, 20781822-20782046, 20782525-20782608, 20783037-20783131, 20783298-20783480, 20785956-20786155, 20786552-20786806, 20788902-20788972, 20789699-20789814, 20790311-20790460, 20791590-20791693, 20792585-20792673, 20793060-20793253)] [lcl|scaffold_1: delta, dna len= 22408856]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:638743-638745, 639772-639780, 639893-639909, 640620-640681, 640789-640813, 641205-641292, 641449-641565, 641995-642087, 642232-642265, 642558-642798, 643208-643308, 644946-645019, 645137-645185, 645381-645508, 645737-645819, 646044-646083, 646333-646449, 647171-647293, 648071-648084, 648321-648489, 648901-649032, 649399-649554)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010360-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c722687-722383, c721902-721895, c721794-721760, c720707-720624, c720236-720021, c719082-718930, c718536-718389, c718199-718135, c718004-717876, c717759-717644, c717278-717181, c716983-716961)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010364-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c909852-909230, c908415-908406, c908173-908012, c907872-907792, c907380-907216)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010386-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1176001 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:1173230-1173339, 1174147-1174333, 1175276-1175413, 1175883-1176001, 1177093-1177182, 1177433-1177561, 1179583-1179674, 1181041-1181265, 1182051-1182114, 1182465-1182606, 1183470-1183673, 1183973-1184051, 1184816-1185054, 1185416-1185589, 1185738-1186103)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010402-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1177093 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:1173230-1173339, 1174147-1174333, 1175276-1175413, 1175883-1176001, 1177093-1177182, 1177433-1177561, 1179583-1179674, 1181041-1181265, 1182051-1182114, 1182465-1182606, 1183470-1183673, 1183973-1184051, 1184816-1185054, 1185416-1185589, 1185738-1186103)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010402-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1196196 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:1190445-1190503, 1192106-1192224, 1192674-1192828, 1193247-1193420, 1193871-1193993, 1194633-1194917, 1195635-1195688, 1196059-1196196, 1196448-1196552, 1196679-1196949, 1197122-1197891, 1198160-1198645)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010403-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1196448 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:1190445-1190503, 1192106-1192224, 1192674-1192828, 1193247-1193420, 1193871-1193993, 1194633-1194917, 1195635-1195688, 1196059-1196196, 1196448-1196552, 1196679-1196949, 1197122-1197891, 1198160-1198645)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010403-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:1570419-1570566, 1571887-1571989, 1572678-1572713, 1573417-1573429, 1575183-1575735, 1576359-1576537, 1576805-1577007, 1578808-1578888, 1579137-1579353, 1581070-1581326, 1581493-1581688, 1582273-1582606, 1582906-1583231)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010441-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2881839 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c2882616-2882549, c2882339-2882138, c2881930-2881839, c2881686-2881587, c2881414-2881382, c2880568-2880462, c2880358-2880193, c2880078-2880006, c2879776-2879700)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_046302-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2885392 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c2886938-2886936, c2886736-2886659, c2886426-2886312, c2886214-2886169, c2886071-2886039, c2885948-2885843, c2885493-2885392, c2885214-2885144, c2884970-2884786, c2884639-2884582, c2884327-2884263, c2884177-2884025, c2883885-2883820, c2883566-2883481)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010555-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2898992 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c2900417-2900343, c2900106-2899974, c2899838-2899681, c2899565-2898992, c2898902-2898817, c2898659-2898549)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010558-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2929494 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c2929650-2929494, c2927678-2927523, c2926388-2926280, c2925433-2925334, c2925001-2924839, c2924639-2924227)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010562-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2935254 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c2943760-2943623, c2943526-2943428, c2943299-2943029, c2942841-2942720, c2942622-2942372, c2942161-2940442, c2940192-2939212, c2939072-2938899, c2938786-2938699, c2938580-2938438, c2937755-2937728, c2937602-2937389, c2937303-2937230, c2937134-2935822, c2935602-2935254, c2934856-2934672, c2933662-2933552, c2933343-2933224, c2933093-2932956, c2932762-2932589)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010563-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2934856 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c2943760-2943623, c2943526-2943428, c2943299-2943029, c2942841-2942720, c2942622-2942372, c2942161-2940442, c2940192-2939212, c2939072-2938899, c2938786-2938699, c2938580-2938438, c2937755-2937728, c2937602-2937389, c2937303-2937230, c2937134-2935822, c2935602-2935254, c2934856-2934672, c2933662-2933552, c2933343-2933224, c2933093-2932956, c2932762-2932589)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010563-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3286136 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c3287456-3287343, c3287088-3286884, c3286702-3286478, c3286265-3286136, c3286093-3286068, c3285762-3285666, c3285572-3285461, c3284803-3284726)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010609-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3343608 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:3341936-3341988, 3342856-3343007, 3343460-3343608, 3343891-3343939, 3344733-3344971)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010619-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3348626 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:3347987-3348056, 3348306-3348411, 3348545-3348626, 3348771-3348906, 3349046-3349257, 3349837-3349953, 3350116-3350186, 3350636-3350744, 3350898-3350969)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010620-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4157986 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c4160117-4160037, c4159485-4159260, c4159111-4158910, c4158776-4158479, c4158370-4158230, c4158124-4157986, c4157848-4157732, c4157490-4157312, c4157154-4157019, c4156748-4156599, c4156510-4156368)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010710-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4584622 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c4588999-4588983, c4588924-4588274, c4587968-4587789, c4587676-4587537, c4587401-4587231, c4587106-4586917, c4586797-4586741, c4586598-4586497, c4586373-4586296, c4586008-4585892, c4585650-4585519, c4585421-4585198, c4585059-4584622, c4582762-4582266)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010768-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4826240 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c4829515-4829339, c4829147-4828943, c4828701-4828511, c4828288-4828175, c4828068-4827936, c4827767-4827582, c4827424-4827174, c4827036-4826725, c4826645-4826455, c4826333-4826240, c4826129-4825941)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010798-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:5097489-5097527, 5097708-5097720, 5097995-5098212)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010836-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5195116 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:5188934-5189275, 5189376-5189501, 5189787-5189909, 5190126-5190243, 5190482-5190712, 5191301-5191403, 5191797-5191960, 5192131-5192222, 5192327-5192489, 5193737-5193921, 5195025-5195116, 5195351-5195379, 5195505-5195630, 5197037-5197215, 5197375-5197470, 5197588-5197669, 5197776-5198064, 5198349-5198409)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010850-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5262515 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c5263726-5263678, c5263528-5263416, c5262944-5262777, c5262583-5262515, c5261898-5261819, c5261462-5261336, c5260382-5260296, c5259999-5259850, c5259755-5259603, c5259451-5259290, c5259027-5258821)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010854-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:5880815-5880949, 5882800-5882952, 5883671-5883796, 5885233-5885239, 5885999-5886181, 5886442-5886587)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_010910-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7166143 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:7165539-7165619, 7166086-7166143, 7166608-7166796, 7166927-7166988, 7167104-7167185, 7167377-7167473, 7167720-7167752, 7167871-7167949, 7168109-7168252, 7168371-7168415)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011066-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:7171245-7171270, 7171398-7171411, 7171863-7171934, 7172550-7172570, 7173016-7173034, 7173155-7173215, 7173359-7173475, 7173601-7173678, 7173783-7173896, 7174060-7174169, 7174369-7174459, 7174542-7174582, 7174745-7174790)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011067-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7265908 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c7270875-7270861, c7269641-7269494, c7268794-7268612, c7268483-7268244, c7268148-7268066, c7267941-7267864, c7267685-7267587, c7267447-7267337, c7266735-7266544, c7266411-7266322, c7266048-7265908, c7265803-7265710, c7265488-7265342, c7263617-7263511, c7263400-7263302)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011078-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:7821559-7821687, 7822047-7822161, 7823995-7824129, 7825701-7825714, 7826037-7826103, 7827615-7827712)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011142-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c7844423-7844239, c7842350-7842203, c7842167-7841910, c7841739-7841711, c7839991-7839907, c7838924-7838889, c7837728-7837716, c7837405-7837259, c7836600-7836524, c7835533-7835512, c7834238-7834132)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011145-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8011531 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:8011471-8011531, 8011716-8011774, 8011897-8012013, 8012193-8012308, 8012435-8012600)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011170-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8011716 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:8011471-8011531, 8011716-8011774, 8011897-8012013, 8012193-8012308, 8012435-8012600)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011170-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8053639 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:8046858-8046894, 8048012-8048096, 8048425-8048500, 8048635-8048727, 8049799-8049916, 8050256-8050308, 8050442-8050510, 8050636-8050760, 8051024-8051138, 8051863-8051961, 8052136-8052231, 8052435-8052473, 8052686-8052850, 8053094-8053307, 8053467-8053639, 8053749-8053889, 8054203-8054380, 8054616-8054743, 8054840-8055025, 8055160-8055258)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011177-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:8150104-8150149, 8151078-8151091, 8151975-8152278, 8152391-8152503)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011190-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8238408 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:8234984-8235021, 8236182-8236255, 8236575-8236724, 8236905-8237108, 8237248-8237346, 8237431-8237591, 8237722-8237864, 8238114-8238249, 8238341-8238408, 8239587-8239725, 8242091-8242177, 8242544-8242614, 8244080-8244136, 8244452-8244503, 8246016-8246147)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011209-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:8402421-8402448, 8402695-8402755, 8403440-8403448, 8403893-8404049, 8404698-8404727)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011227-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9059376-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9063154)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011330-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9059516 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9059376-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9063154)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011330-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9061272 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9059376-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9063154)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011330-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9058412-9058588, 9058738-9058872, 9059063-9059215, 9059358-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9063154)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011330-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9059516 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9058412-9058588, 9058738-9058872, 9059063-9059215, 9059358-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9063154)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011330-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9061272 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9058412-9058588, 9058738-9058872, 9059063-9059215, 9059358-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9063154)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011330-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9920896 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:9918127-9918201, 9918808-9918879, 9919258-9919340, 9919478-9919532, 9919659-9919739, 9919968-9920063, 9920419-9920517, 9920783-9920896, 9921010-9921059, 9921336-9921462, 9922046-9922087)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011418-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10392527 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:10392484-10392527, 10393066-10393257, 10393346-10393409, 10393502-10393669, 10393767-10393988)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011473-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10531206 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:10526213-10526241, 10527062-10527211, 10527471-10530582, 10530727-10530859, 10530952-10531206, 10531379-10531407)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011489-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10547211 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:10547046-10547211, 10548054-10548168, 10549844-10549976)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011491-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c10795737-10795735, c10795418-10795382, c10795167-10795160, c10794846-10794639, c10792398-10791496, c10788817-10788728, c10788250-10788159)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011506-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10897964 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:10894190-10894192, 10895418-10895610, 10895955-10896123, 10896234-10896369, 10897340-10897526, 10897804-10897964, 10898175-10898276, 10898436-10898531, 10898744-10898863, 10899076-10899132)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011518-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10960308 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c10960373-10960308, c10959843-10959748, c10959654-10959511, c10959435-10959306, c10959202-10959068, c10958823-10958705, c10958516-10958387, c10958224-10958152, c10958022-10957885, c10957626-10957469, c10957338-10957097)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011526-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10958387 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c10960373-10960308, c10959843-10959748, c10959654-10959511, c10959435-10959306, c10959202-10959068, c10958823-10958705, c10958516-10958387, c10958224-10958152, c10958022-10957885, c10957626-10957469, c10957338-10957097)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011526-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11464698 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c11465022-11464929, c11464843-11464698, c11464545-11464310, c11464104-11464007, c11463823-11463676, c11463537-11463492)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011573-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11464698 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c11464733-11464698, c11464545-11464310, c11464104-11464007, c11463823-11463672)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011573-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11730511 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c11731320-11731187, c11730659-11730511, c11730414-11729794, c11729642-11729461, c11728691-11728548)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011600-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:11740069-11740096, 11740182-11740379, 11740422-11740432, 11742112-11742246)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011602-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c11821816-11821659, c11821125-11821112, c11820522-11820488)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011607-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12381547 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:12379710-12379823, 12380146-12380382, 12380494-12380619, 12381329-12381547, 12381739-12381974, 12384336-12384533, 12387338-12387482, 12389492-12389703, 12391730-12391846, 12392061-12392187, 12392315-12392503, 12395375-12395494)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011645-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:12982215-12982223, 12982653-12982731, 12982848-12982859, 12983163-12983317, 12983660-12983776, 12984460-12984564)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011697-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c13614079-13614060, c13613711-13613703, c13613422-13613408, c13613249-13613193, c13612984-13609572, c13609483-13609401, c13608392-13608102, c13607573-13607445, c13606104-13605946)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011744-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13672899 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c13687054-13686988, c13685075-13684864, c13681334-13681141, c13680684-13680555, c13680244-13680143, c13680017-13679758, c13679011-13678843, c13678686-13678549, c13678440-13678258, c13677343-13677246, c13677102-13676871, c13676583-13676401, c13675724-13675570, c13673845-13673763, c13672988-13672899, c13672182-13672059, c13671781-13671665, c13671533-13671464, c13671058-13670924, c13667785-13667708)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011753-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13672182 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c13687054-13686988, c13685075-13684864, c13681334-13681141, c13680684-13680555, c13680244-13680143, c13680017-13679758, c13679011-13678843, c13678686-13678549, c13678440-13678258, c13677343-13677246, c13677102-13676871, c13676583-13676401, c13675724-13675570, c13673845-13673763, c13672988-13672899, c13672182-13672059, c13671781-13671665, c13671533-13671464, c13671058-13670924, c13667785-13667708)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011753-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13726742 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c13727876-13727797, c13727592-13727505, c13727337-13727233, c13727085-13726937, c13726833-13726742, c13726645-13726590, c13726448-13726050)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011761-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14009676 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c14010964-14010744, c14010673-14010590, c14010455-14010314, c14010216-14010076, c14009820-14009676, c14009530-14009330, c14009124-14008984, c14008744-14008559, c14008443-14008337, c14008228-14008052)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011801-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14179083 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c14179627-14179525, c14179426-14179391, c14179223-14179083, c14178819-14178757, c14178563-14178393, c14178159-14178030, c14176991-14176775, c14176638-14176535, c14176300-14176175, c14175900-14175740, c14175288-14175215)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011827-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14653224 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c14653235-14653224, c14650878-14650786, c14649997-14649934, c14648403-14648305, c14648048-14647905, c14647664-14647569, c14647414-14647296, c14647000-14646848, c14646639-14646466, c14646042-14645869, c14644699-14644585, c14644425-14644379)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011884-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:14963721-14963905, 14965200-14965321, 14965596-14965609, 14966648-14966755)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011929-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15096629 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c15097483-15097423, c15097110-15096968, c15096754-15096629, c15096440-15096317, c15096206-15096109, c15096026-15095819, c15095688-15095603)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_011941-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:15859487-15859568, 15860894-15861085, 15861694-15861719, 15861925-15861960, 15862873-15862965, 15863904-15863972, 15864352-15864396, 15865098-15865151, 15866384-15866397, 15866650-15866703, 15866995-15867048, 15867217-15867270, 15867377-15867421, 15867625-15867678, 15868446-15868490, 15868869-15868922, 15869041-15869139, 15869264-15869308, 15869657-15869755, 15870164-15870217, 15870326-15870433, 15871118-15871160, 15871268-15871366, 15871603-15871656, 15871799-15871897, 15872008-15872061, 15872190-15872243, 15872559-15872612, 15872720-15872773, 15872969-15873013, 15873188-15873286, 15873396-15873503, 15873625-15873871, 15874249-15874304, 15874534-15874641, 15874797-15874850, 15875145-15875198, 15875367-15875528, 15876066-15876173, 15876308-15876415, 15876529-15876582, 15...] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012019-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 16605443 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:16604532-16604801, 16605135-16605443, 16606100-16606180)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012102-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16606100 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:16604532-16604801, 16605135-16605443, 16606100-16606180)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012102-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:17039462-17039647, 17040410-17040434, 17040895-17040950, 17041345-17041569, 17041696-17041844, 17041970-17042143, 17043001-17043938, 17044191-17044361, 17044735-17044851, 17044985-17045181, 17045447-17045452, 17045538-17045614, 17047158-17047284)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012139-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17162881 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:17162546-17162669, 17162765-17162881, 17163335-17163985, 17164398-17164601, 17165362-17165463, 17165811-17165851)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012147-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:17208520-17208559, 17209712-17209770, 17211784-17211966, 17212537-17212759, 17213430-17213566, 17214596-17214655, 17214782-17214871, 17215184-17215294, 17215731-17215764, 17216101-17216246, 17216709-17216933, 17217259-17217450, 17218382-17218510, 17218744-17218760, 17218991-17219138, 17219387-17219458, 17220943-17221087, 17221466-17221548, 17221817-17221924, 17222692-17222835, 17223717-17223822, 17225145-17225259, 17225696-17225857, 17226305-17226315, 17226446-17226567)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012154-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:17257751-17257765, 17258001-17258013, 17258907-17259064, 17259752-17260067, 17260795-17260891, 17262237-17262305, 17262414-17262436, 17262691-17262848, 17263528-17263846, 17264550-17264646, 17265886-17265954, 17266529-17266739)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012157-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:17846861-17847253, 17847751-17847759, 17848257-17848415, 17849047-17849245, 17849921-17850001, 17850446-17851308)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012239-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17881818 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c17884496-17884406, c17884313-17884275, c17884060-17883963, c17883383-17883317, c17883200-17883109, c17882360-17882256, c17882156-17882089, c17881914-17881818, c17881665-17881522)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012242-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17881818 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c17883380-17883317, c17883200-17883109, c17882360-17882256, c17882156-17882089, c17881914-17881818, c17881665-17881522)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012242-T2]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c>18053219-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18047903-18047799)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012260-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18053219 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c>18053219-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18047903-18047799)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012260-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c>18053219-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18048443-18048357)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012260-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18053219 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c>18053219-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18048443-18048357)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012260-T2]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c>18185265-18185110, c18183759-18183611, c18183521-18183476, c18183158-18183034, c18182909-18182811, c18181215-18181095, c18180836-18180677, c18180569-18180448, c18180080-18180005, c18179751-18179480, c18179245-18179153, c18178112-18178027, c18177715-18177658, c18177466-18177359, c18175750-18175577, c18174938-18174831, c18172534-18172364, c18171105-18170985, c18169234-18169131)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012268-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18185265 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c>18185265-18185110, c18183759-18183611, c18183521-18183476, c18183158-18183034, c18182909-18182811, c18181215-18181095, c18180836-18180677, c18180569-18180448, c18180080-18180005, c18179751-18179480, c18179245-18179153, c18178112-18178027, c18177715-18177658, c18177466-18177359, c18175750-18175577, c18174938-18174831, c18172534-18172364, c18171105-18170985, c18169234-18169131)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012268-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:c18218961-18218961, c18218550-18218444, c18218190-18218098, c18217099-18216962, c18214506-18214496, c18214397-18214273, c18212592-18212450, c18212257-18212156, c18211865-18211758, c18210333-18210213, c18209815-18209709, c18209053-18208874)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012270-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:18612430-18612449, 18612698-18612711, 18612824-18613839, 18614888-18615138, 18617055-18617432, 18617602-18618733)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012321-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18747459 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:18746632-18747459, 18747541-18747759)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012337-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18747541 of lcl|scaffold_6 FEATURE: CDS: hypothetical protein [(lcl|scaffold_6:18746632-18747459, 18747541-18747759)] [lcl|scaffold_6: delta, dna len= 19162884] -> [gnl|ncbi|FUN_012337-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 238951 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:238888-238951, 240294-240421, 240758-240903, 241283-242836, 243163-243239, 243349-243448, 243615-243776, 244206-244317, 245386-245603)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1176001 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1172974-1173339, 1174147-1174333, 1175276-1175413, 1175883-1176001, 1177093-1177182, 1177433-1177561, 1179583-1179674, 1181041-1181265, 1182051-1182114, 1182465-1182606, 1183470-1183673, 1183973-1184051, 1184816-1185054, 1185416-1185589, 1185738-1186103)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1177093 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1172974-1173339, 1174147-1174333, 1175276-1175413, 1175883-1176001, 1177093-1177182, 1177433-1177561, 1179583-1179674, 1181041-1181265, 1182051-1182114, 1182465-1182606, 1183470-1183673, 1183973-1184051, 1184816-1185054, 1185416-1185589, 1185738-1186103)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1196196 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1190345-1190503, 1192106-1192224, 1192674-1192828, 1193247-1193420, 1193871-1193993, 1194633-1194917, 1195635-1195688, 1196059-1196196, 1196448-1196552, 1196679-1196949, 1197122-1197891, 1198160-1200062)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1196448 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1190345-1190503, 1192106-1192224, 1192674-1192828, 1193247-1193420, 1193871-1193993, 1194633-1194917, 1195635-1195688, 1196059-1196196, 1196448-1196552, 1196679-1196949, 1197122-1197891, 1198160-1200062)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1295082 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1294188-1294280, 1294830-1295082, 1295148-1295207)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1489351 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1486289-1486802, 1488018-1488168, 1488674-1488860, 1489063-1489351, 1489512-1490278)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1764914 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:1764890-1764914, 1765020-1765611, 1765822-1765877, 1766029-1766049)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2863161 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:2863074-2863161, 2864313-2864528, 2865055-2865132, 2865239-2865381, 2865563-2865756)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2881839 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c2882853-2882549, c2882339-2882138, c2881930-2881839, c2881686-2881587, c2881414-2881382, c2880568-2880462, c2880358-2880193, c2880078-2880006, c2879776-2879363)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2885392 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c2886938-2886936, c2886736-2886659, c2886426-2886312, c2886214-2886169, c2886071-2886039, c2885948-2885843, c2885493-2885392, c2885214-2885144, c2884970-2884786, c2884639-2884582, c2884327-2884263, c2884177-2884025, c2883885-2883820, c2883566-2883410)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2898992 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c2902820-2902563, c2902177-2902130, c2900418-2900343, c2900106-2899974, c2899838-2899681, c2899565-2898992, c2898902-2898817, c2898659-2898447)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2929494 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c2929937-2929494, c2927678-2927523, c2926388-2926280, c2925433-2925334, c2925001-2924839, c2924639-2923962)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2935254 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c2943760-2943623, c2943526-2943428, c2943299-2943029, c2942841-2942720, c2942622-2942372, c2942161-2940442, c2940192-2939212, c2939072-2938899, c2938786-2938699, c2938580-2938438, c2937755-2937728, c2937602-2937389, c2937303-2937230, c2937134-2935822, c2935602-2935254, c2934856-2934672, c2933662-2933552, c2933343-2933224, c2933093-2932956, c2932762-2932019)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2934856 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c2943760-2943623, c2943526-2943428, c2943299-2943029, c2942841-2942720, c2942622-2942372, c2942161-2940442, c2940192-2939212, c2939072-2938899, c2938786-2938699, c2938580-2938438, c2937755-2937728, c2937602-2937389, c2937303-2937230, c2937134-2935822, c2935602-2935254, c2934856-2934672, c2933662-2933552, c2933343-2933224, c2933093-2932956, c2932762-2932019)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3286136 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c3288216-3287978, c3287506-3287343, c3287088-3286884, c3286702-3286478, c3286265-3286136, c3286093-3286068, c3285762-3285666, c3285572-3285461, c3284803-3284112)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3326079 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:3325993-3326079, 3326375-3326590, 3326763-3326881, 3327014-3327224, 3327450-3327542, 3327644-3327796, 3327921-3328649)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3343608 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:3341936-3341988, 3342856-3343007, 3343460-3343608, 3343891-3343939, 3344733-3344971)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3348626 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:3347725-3348056, 3348306-3348411, 3348545-3348626, 3348771-3348906, 3349046-3349257, 3349837-3349953, 3350116-3350186, 3350636-3350744, 3350898-3351269)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3520943 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:3519279-3519366, 3519570-3519638, 3519763-3519874, 3519957-3520053, 3520166-3520228, 3520513-3520580, 3520734-3520943, 3521004-3521073)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3521004 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:3519279-3519366, 3519570-3519638, 3519763-3519874, 3519957-3520053, 3520166-3520228, 3520513-3520580, 3520734-3520943, 3521004-3521073)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4161023 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c4161246-4161023, c4160166-4160037, c4159485-4159260, c4159111-4158910, c4158776-4158479, c4158370-4158230, c4158124-4157986, c4157848-4157732, c4157490-4157312, c4157154-4157019, c4156748-4156599, c4156510-4155212)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4160166 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c4161246-4161023, c4160166-4160037, c4159485-4159260, c4159111-4158910, c4158776-4158479, c4158370-4158230, c4158124-4157986, c4157848-4157732, c4157490-4157312, c4157154-4157019, c4156748-4156599, c4156510-4155212)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4157986 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c4161246-4161023, c4160166-4160037, c4159485-4159260, c4159111-4158910, c4158776-4158479, c4158370-4158230, c4158124-4157986, c4157848-4157732, c4157490-4157312, c4157154-4157019, c4156748-4156599, c4156510-4155212)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4584622 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c4588999-4588983, c4588924-4588274, c4587968-4587789, c4587676-4587537, c4587401-4587231, c4587106-4586917, c4586797-4586741, c4586598-4586497, c4586373-4586296, c4586008-4585892, c4585650-4585519, c4585421-4585198, c4585059-4584622, c4582762-4581960)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4826240 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c4829723-4829339, c4829147-4828943, c4828701-4828511, c4828288-4828175, c4828068-4827936, c4827767-4827582, c4827424-4827174, c4827036-4826725, c4826645-4826455, c4826333-4826240, c4826129-4825356)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4826240 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c4829723-4829339, c4829147-4828943, c4828701-4828511, c4828288-4828175, c4828068-4827936, c4827767-4827582, c4827424-4827174, c4827036-4826455, c4826333-4826240, c4826129-4825356)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5195116 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:5187640-5187904, 5188930-5189275, 5189376-5189501, 5189787-5189909, 5190126-5190243, 5190482-5190712, 5191301-5191403, 5191797-5191960, 5192131-5192222, 5192327-5192489, 5193737-5193921, 5195025-5195116, 5195351-5195379, 5195505-5195630, 5197037-5197215, 5197375-5197470, 5197588-5197669, 5197776-5198064, 5198349-5199800)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5262515 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c5263822-5263678, c5263528-5263416, c5262944-5262777, c5262583-5262515, c5261898-5261819, c5261462-5261336, c5260382-5260296, c5259999-5259850, c5259755-5259603, c5259451-5259290, c5259027-5257982)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7166143 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:7164894-7164944, 7165537-7165619, 7166086-7166143, 7166608-7166796, 7166927-7166988, 7167104-7167185, 7167377-7167473, 7167720-7167752, 7167871-7167949, 7168109-7168252, 7168371-7168443)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7265908 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c7270983-7270861, c7269641-7269494, c7268794-7268612, c7268483-7268244, c7268148-7268066, c7267941-7267864, c7267685-7267587, c7267447-7267337, c7266735-7266544, c7266411-7266322, c7266048-7265908, c7265803-7265710, c7265488-7265342, c7263617-7263511, c7263400-7261657)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8011531 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:8011370-8011531, 8011716-8011774, 8011897-8012013, 8012193-8012308, 8012435-8012977)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8011716 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:8011370-8011531, 8011716-8011774, 8011897-8012013, 8012193-8012308, 8012435-8012977)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8053639 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:8046747-8046894, 8048012-8048096, 8048425-8048500, 8048635-8048727, 8049799-8049916, 8050256-8050308, 8050442-8050510, 8050636-8050760, 8051024-8051138, 8051863-8051961, 8052136-8052231, 8052435-8052473, 8052686-8052850, 8053094-8053307, 8053467-8053639, 8053749-8053889, 8054203-8054380, 8054616-8054743, 8054840-8055025, 8055160-8056724)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8238408 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:8234984-8235021, 8236182-8236255, 8236575-8236724, 8236905-8237108, 8237248-8237346, 8237431-8237591, 8237722-8237864, 8238114-8238249, 8238341-8238408, 8239587-8239725, 8242091-8242177, 8242544-8242614, 8244080-8244136, 8244452-8244503, 8246016-8246147)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9059516 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:9059266-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9064481)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9061272 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:9059266-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9064481)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9059516 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:9058412-9058588, 9058738-9058872, 9059063-9059215, 9059358-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9064481)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9061272 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:9058412-9058588, 9058738-9058872, 9059063-9059215, 9059358-9059516, 9059655-9059948, 9060050-9060193, 9060314-9060445, 9060670-9060684, 9061147-9061272, 9061366-9061455, 9061546-9061782, 9061915-9062058, 9062193-9062299, 9062401-9062574, 9063112-9064481)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9920896 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:9918127-9918201, 9918808-9918879, 9919258-9919340, 9919478-9919532, 9919659-9919739, 9919968-9920063, 9920419-9920517, 9920783-9920896, 9921010-9921059, 9921336-9921462, 9922046-9922087)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10392527 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:10392429-10392527, 10393066-10393257, 10393346-10393409, 10393502-10393669, 10393767-10394243)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10531206 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:10522948-10522990, 10525496-10525580, 10526120-10526241, 10527062-10527211, 10527471-10530582, 10530727-10530859, 10530952-10531206, 10531379-10533623)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10547211 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:10547046-10547211, 10548054-10548168, 10549844-10549976)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10897964 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:10894154-10894192, 10895418-10895610, 10895955-10896123, 10896234-10896369, 10897340-10897526, 10897804-10897964, 10898175-10898276, 10898436-10898531, 10898744-10898863, 10899076-10899279)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10960308 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c10960375-10960308, c10959843-10959748, c10959654-10959511, c10959435-10959306, c10959202-10959068, c10958823-10958705, c10958516-10958387, c10958224-10958152, c10958022-10957885, c10957626-10957469, c10957338-10956428)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10958387 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c10960375-10960308, c10959843-10959748, c10959654-10959511, c10959435-10959306, c10959202-10959068, c10958823-10958705, c10958516-10958387, c10958224-10958152, c10958022-10957885, c10957626-10957469, c10957338-10956428)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11464698 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c11465241-11464929, c11464843-11464698, c11464545-11464310, c11464104-11464007, c11463823-11463676, c11463537-11463291)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11464698 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c11464784-11464698, c11464545-11464310, c11464104-11464007, c11463823-11463446)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11730511 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c11731320-11731187, c11730659-11730511, c11730414-11729794, c11729642-11729461, c11728691-11725916)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12381547 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:12379710-12379823, 12380146-12380382, 12380494-12380619, 12381329-12381547, 12381739-12381974, 12384336-12384533, 12387338-12387482, 12389492-12389703, 12391730-12391846, 12392061-12392187, 12392315-12392503, 12395375-12396928)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13672899 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c13687445-13686988, c13685075-13684864, c13681334-13681141, c13680684-13680555, c13680244-13680143, c13680017-13679758, c13679011-13678843, c13678686-13678549, c13678440-13678258, c13677343-13677246, c13677102-13676871, c13676583-13676401, c13675724-13675570, c13673845-13673763, c13672988-13672899, c13672182-13672059, c13671781-13671665, c13671533-13671464, c13671058-13670924, c13667785-13667708)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13672182 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c13687445-13686988, c13685075-13684864, c13681334-13681141, c13680684-13680555, c13680244-13680143, c13680017-13679758, c13679011-13678843, c13678686-13678549, c13678440-13678258, c13677343-13677246, c13677102-13676871, c13676583-13676401, c13675724-13675570, c13673845-13673763, c13672988-13672899, c13672182-13672059, c13671781-13671665, c13671533-13671464, c13671058-13670924, c13667785-13667708)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13726742 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c13727885-13727797, c13727592-13727505, c13727337-13727233, c13727085-13726937, c13726833-13726742, c13726645-13726590, c13726448-13725809)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14009676 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c14010964-14010744, c14010673-14010590, c14010455-14010314, c14010216-14010076, c14009820-14009676, c14009530-14009330, c14009124-14008984, c14008744-14008559, c14008443-14008337, c14008228-14007540)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14179083 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c14180729-14180620, c14180483-14180414, c14179638-14179525, c14179426-14179391, c14179223-14179083, c14178819-14178757, c14178563-14178393, c14178159-14178030, c14176991-14176775, c14176638-14176535, c14176300-14176175, c14175900-14175740, c14175288-14174529)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14653224 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c14653235-14653224, c14650878-14650786, c14649997-14649934, c14648403-14648305, c14648048-14647905, c14647664-14647569, c14647414-14647296, c14647000-14646848, c14646639-14646466, c14646042-14645869, c14644699-14644585, c14644425-14644379)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15096629 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c15097486-15097423, c15097110-15096968, c15096754-15096629, c15096440-15096317, c15096206-15096109, c15096026-15095819, c15095688-15095515)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 16605443 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:16603492-16603676, 16604331-16604801, 16605135-16605443, 16606100-16606264)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16606100 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:16603492-16603676, 16604331-16604801, 16605135-16605443, 16606100-16606264)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17162881 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:17162546-17162669, 17162765-17162881, 17163335-17163985, 17164398-17164601, 17165362-17165463, 17165811-17166863)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17881818 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c17884715-17884406, c17884313-17884275, c17884060-17883963, c17883383-17883317, c17883200-17883109, c17882360-17882256, c17882156-17882089, c17881914-17881818, c17881665-17881433)] [lcl|scaffold_6: delta, dna len= 19162884]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17881818 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c17883544-17883317, c17883200-17883109, c17882360-17882256, c17882156-17882089, c17881914-17881818, c17881665-17881433)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c>18053220-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18047903-18047598)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18053220 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c>18053220-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18047903-18047598)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c>18053220-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18048443-18048042)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18053220 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c>18053220-18053115, c18052701-18052635, c18052548-18052436, c18052358-18052245, c18051319-18051135, c18050590-18050497, c18048443-18048042)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c>18185266-18185110, c18183759-18183611, c18183521-18183476, c18183158-18183034, c18182909-18182811, c18181215-18181095, c18180836-18180677, c18180569-18180448, c18180080-18180005, c18179751-18179480, c18179245-18179153, c18178112-18178027, c18177715-18177658, c18177466-18177359, c18175750-18175577, c18174938-18174831, c18172534-18172364, c18171105-18170985, c18169234-18168869)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18185266 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:c>18185266-18185110, c18183759-18183611, c18183521-18183476, c18183158-18183034, c18182909-18182811, c18181215-18181095, c18180836-18180677, c18180569-18180448, c18180080-18180005, c18179751-18179480, c18179245-18179153, c18178112-18178027, c18177715-18177658, c18177466-18177359, c18175750-18175577, c18174938-18174831, c18172534-18172364, c18171105-18170985, c18169234-18168869)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18747459 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:18746632-18747459, 18747541-18747860)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18747541 of lcl|scaffold_6 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_6:18746632-18747459, 18747541-18747860)] [lcl|scaffold_6: delta, dna len= 19162884]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c531312-531218, c530957-530904, c530280-530266, c530005-529861)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019566-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c967367-967212, c967098-967052, c966583-966433, c965688-965557, c964499-964317, c963722-963630, c963068-962982, c962873-962840, c962419-962318, c961833-961801, c960651-960641, c960234-959812, c958308-958126, c956542-955150, c955038-954260)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019613-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c1114247-1114104, c1112245-1112141, c1111808-1111704, c1111345-1111217, c1110842-1110663, c1110093-1110083, c1109301-1109172, c1105887-1105816, c1103780-1103626, c1103417-1103399)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019631-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2078412 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:2069167-2069328, 2069428-2069590, 2069723-2069875, 2070046-2070073, 2070155-2070317, 2070418-2070597, 2070676-2070772, 2070866-2071030, 2071759-2071910, 2072300-2072393, 2072921-2073164, 2073392-2073554, 2073656-2073748, 2074028-2074216, 2074388-2074661, 2074781-2074892, 2075556-2075760, 2075920-2076062, 2076159-2076316, 2077010-2077185, 2077749-2077899, 2078023-2078222, 2078332-2078412, 2078617-2078723, 2078881-2078973, 2079054-2079124, 2079241-2079317, 2079414-2079584, 2079967-2080099, 2080356-2080555, 2081198-2081427, 2081808-2081925, 2082071-2082265, 2082391-2082492, 2082574-2082652, 2083321-2083531, 2083775-2083844, 2084024-2084106, 2084258-2084379, 2085327-2085481, 2085595-2085744, 2085981-2086211)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019744-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2451134 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c2464577-2463926, c2463511-2463350, c2463069-2462953, c2462753-2462629, c2462522-2462418, c2461811-2461680, c2461572-2461466, c2461300-2461168, c2460482-2460386, c2459973-2459789, c2459671-2459603, c2459488-2459451, c2459377-2459287, c2458711-2458643, c2458497-2458460, c2457695-2457605, c2457418-2457350, c2457260-2457223, c2456163-2456073, c2455859-2455750, c2455646-2455448, c2455357-2455317, c2455203-2455113, c2453750-2453664, c2451223-2451134, c2451014-2450886, c2450785-2450696, c2450489-2450397, c2450310-2450242, c2450134-2450051, c2448055-2447972, c2447789-2447697, c2447330-2447220, c2447072-2447043)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019793-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2825784 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c2831464-2831420, c2830828-2830575, c2830070-2829992, c2829547-2829437, c2828129-2828005, c2827464-2827326, c2826947-2826885, c2826329-2826206, c2825891-2825784, c2825645-2825557, c2825196-2825098, c2824824-2824667, c2824543-2824444, c2824340-2824212, c2823741-2823561, c2823423-2823362, c2822954-2822844, c2821783-2821718, c2821638-2821537, c2821456-2821393, c2821291-2821167, c2820833-2820781, c2820629-2820527, c2820423-2820375, c2820092-2819938, c2819328-2819229, c2818969-2818866, c2818762-2818682, c2818447-2818266, c2817915-2817710, c2817468-2817378, c2817204-2817052, c2816898-2816798, c2816244-2816148, c2815703-2815555, c2815210-2815155, c2815056-2814960, c2814491-2814424, c2814263-2814116, c2813642-2813588, c2812447-2812311, c2811863-2811751)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019824-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2842969 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:2839540-2840509, 2840660-2841193, 2841451-2841604, 2842180-2842692, 2842894-2842969, 2843154-2843342, 2843551-2843680, 2844308-2844552)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019828-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3508187 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:3477296-3477376, 3477900-3477977, 3478259-3478351, 3478464-3478675, 3478922-3479075, 3479098-3479154, 3479383-3479502, 3480966-3481079, 3481319-3481456, 3481743-3481907, 3482058-3482170, 3482466-3482634, 3482875-3482971, 3483083-3483276, 3483481-3483645, 3483876-3484016, 3484129-3484230, 3484374-3484550, 3484767-3484925, 3485051-3486604, 3486646-3486803, 3486941-3487860, 3487872-3488071, 3488163-3488297, 3489234-3489427, 3489628-3489703, 3489783-3489889, 3489974-3490097, 3490189-3490479, 3490664-3491259, 3491381-3491536, 3491790-3491940, 3492090-3492248, 3493649-3493816, 3493907-3494008, 3494130-3494330, 3494630-3494837, 3495173-3495285, 3495408-3495610, 3495703-3495810, 3495903-3496182, 3496299-3496619, 3496723-3497052, 3497229-3497549, 3497673-3498002, 3498112-3498441...] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019909-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3508187 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:3477296-3477376, 3477900-3477977, 3478259-3478351, 3478464-3478675, 3478922-3479075, 3479098-3479154, 3479383-3479502, 3480966-3481079, 3481319-3481456, 3481743-3481907, 3482058-3482170, 3482466-3482634, 3482875-3482971, 3483083-3483276, 3483481-3483645, 3483876-3484016, 3484129-3484230, 3484374-3484550, 3484767-3484925, 3485051-3486604, 3486646-3486803, 3486941-3487860, 3487872-3488071, 3488163-3488297, 3489234-3489427, 3489628-3489703, 3489783-3489889, 3489974-3490097, 3490189-3490479, 3490664-3491259, 3491381-3491536, 3491790-3491940, 3492090-3492248, 3493649-3493816, 3493907-3494008, 3494130-3494330, 3494630-3494837, 3495173-3495285, 3495408-3495610, 3495703-3495810, 3495903-3496182, 3496299-3496619, 3496723-3497052, 3497229-3497549, 3498551-3498895, 3499039-3499217...] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019908-T1]
WARNING: valid [SEQ_FEAT.CDSmRNArange] mRNA overlaps or contains CDS but does not completely contain intervals FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c4349341-4349162, c4346211-4346064, c4344695-4344576, c4342298-4342237, c4340585-4340528, c4339722-4339653, c4339612-4339522)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_019999-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4656646 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c4661705-4661578, c4658917-4658741, c4658485-4658344, c4658119-4657978, c4657079-4656946, c4656821-4656646, c4656434-4656387, c4656195-4656074, c4655826-4655758, c4655608-4655468, c4655310-4655203, c4654957-4654871, c4654645-4654476)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020032-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:4666256-4666393, 4666578-4666664, 4666764-4666832, 4666929-4666940, 4667076-4667204)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020034-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4702480 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c4707421-4707296, c4706934-4706723, c4706436-4706328, c4706209-4706060, c4705778-4705607, c4705404-4705304, c4704950-4704701, c4704450-4704295, c4703788-4703538, c4703427-4703316, c4703241-4703089, c4702954-4702855, c4702589-4702480, c4702296-4702133, c4701932-4701769, c4701409-4701304, c4701198-4701008, c4700355-4700196, c4699999-4699810, c4699627-4699458, c4698531-4698387, c4698288-4698109, c4697862-4697632, c4697491-4697244, c4696979-4696800, c4696699-4696465, c4696338-4696099, c4695943-4695816, c4695703-4695556, c4695475-4695200, c4695006-4694719, c4694485-4694334, c4693754-4693544, c4693379-4693075)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020036-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4756928 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:4755100-4755175, 4755714-4755808, 4755905-4755986, 4756088-4756243, 4756447-4756625, 4756834-4756928, 4757260-4757317)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020046-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4820464 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:4819148-4819286, 4819405-4819495, 4819590-4819717, 4819847-4819926, 4820278-4820464, 4820576-4820640, 4820809-4820845, 4821045-4821174, 4821399-4821516)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020052-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4820576 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:4819148-4819286, 4819405-4819495, 4819590-4819717, 4819847-4819926, 4820278-4820464, 4820576-4820640, 4820809-4820845, 4821045-4821174, 4821399-4821516)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020052-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5513154 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c5518267-5518155, c5517230-5516952, c5515482-5515324, c5514959-5514858, c5514758-5514671, c5514530-5514396, c5514202-5514130, c5513992-5513826, c5513724-5513629, c5513530-5513392, c5513300-5513154, c5513051-5512956, c5512851-5512627, c5512440-5512275, c5512185-5512081, c5511071-5510983, c5510762-5510662, c5510566-5510119, c5509816-5509647, c5509403-5509249, c5509034-5508874, c5508616-5508536, c5508395-5508148, c5507893-5507679, c5507542-5507226, c5507021-5506846, c5505803-5505716, c5505460-5505288)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020115-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:5710261-5710334, 5711468-5711480, 5711539-5711649, 5713136-5713217, 5713395-5713570, 5713889-5714057, 5714252-5714438, 5714727-5714998, 5715116-5715189, 5715322-5715456, 5716087-5716354, 5718282-5718442, 5719421-5719499, 5719687-5719712)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020138-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5989065 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:5986762-5986893, 5987694-5987783, 5987941-5987992, 5988147-5988316, 5988533-5988626, 5988935-5989065, 5989160-5989256, 5989342-5989435, 5989583-5989664, 5989765-5989869, 5990056-5990128, 5990337-5990470)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020172-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6316145 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:6315452-6316145, 6316248-6316415, 6316684-6316767, 6316878-6316961, 6317084-6317165, 6317318-6318206)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020203-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6596260 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c6600536-6600468, c6598028-6597690, c6597434-6597276, c6597047-6596940, c6596416-6596260, c6595747-6595601, c6595246-6595202, c6594946-6594867, c6594478-6594366, c6593610-6593427, c6593179-6593095, c6592568-6592423, c6591394-6591304, c6591192-6591044, c6590808-6590708, c6590528-6590459, c6590215-6590097, c6589871-6589730)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020224-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c6969831-6969684, c6967918-6967851, c6966720-6966627, c6966526-6966409, c6963463-6963169, c6963046-6962933, c6961828-6961819, c6961438-6961312, c6960900-6960837, c6959598-6959481, c6959158-6959056, c6958861-6958762, c6958144-6957956, c6956721-6956647, c6956207-6956149, c6955253-6955057, c6954444-6954293, c6953967-6953778, c6953681-6953592, c6953369-6953217, c6952426-6952314)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020253-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7085821 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:7080151-7080228, 7080733-7080925, 7081008-7081500, 7081788-7081982, 7082517-7082758, 7082901-7083023, 7083158-7083236, 7083343-7083463, 7083943-7084052, 7084374-7084463, 7084822-7084897, 7085034-7085239, 7085471-7085600, 7085678-7085821, 7086120-7086286, 7086591-7086672, 7086783-7086872, 7087008-7087062, 7087204-7087340, 7087623-7087726, 7087854-7088003, 7088691-7088754, 7088960-7089038, 7089680-7089891, 7090155-7090262, 7090395-7090458, 7090854-7091035, 7091126-7091233, 7091554-7091649)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020268-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7140037 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:7132532-7133090, 7135269-7135436, 7137853-7138004, 7138188-7138361, 7139230-7139327, 7139675-7139755, 7139922-7140037, 7140163-7140275, 7140414-7140601, 7140725-7140842, 7141213-7141371, 7141816-7142118, 7142398-7142548, 7142837-7143707, 7143828-7143965, 7144086-7144845, 7144987-7145189, 7145702-7145792, 7145880-7146026, 7146256-7146519, 7146676-7146900, 7147087-7147176, 7147414-7147704, 7148333-7148463, 7148869-7149073, 7149327-7149550, 7150043-7150193, 7150519-7150763, 7151013-7151151, 7151526-7151610, 7152054-7152250, 7152394-7152479, 7152779-7152842, 7152983-7153236, 7153501-7153674, 7153863-7153905, 7154131-7154313)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020274-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8050350 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8050315-8050350, 8050450-8050590, 8050794-8051061, 8051175-8051387, 8051530-8051726, 8051991-8052062)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020362-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c8294065-8294029, c8291941-8291694, c8291476-8291342, c8291014-8290910, c8290822-8290772, c8290649-8290634, c8290429-8290290, c8290198-8290060, c8289914-8289787, c8289571-8289515, c8289382-8289311, c8288906-8288475, c8287833-8287819, c8286602-8286489)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020396-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8377825 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c8378979-8378977, c8378098-8378002, c8377874-8377825, c8377444-8377361)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020406-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8426295 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8421691-8421699, 8423076-8423235, 8423619-8423692, 8424153-8424233, 8424829-8424888, 8425345-8425490, 8425652-8425742, 8425988-8426059, 8426171-8426295, 8426464-8426596, 8427019-8427123, 8427521-8427627, 8427849-8428003, 8428296-8428406, 8428776-8428884, 8429328-8429397)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020413-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8426295 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8421691-8421699, 8423076-8423235, 8423619-8423692, 8424153-8424233, 8424829-8424888, 8425345-8425490, 8425652-8425742, 8425988-8426059, 8426171-8426295, 8426464-8426596, 8427019-8427123, 8427521-8427627, 8427849-8428003, 8428296-8428420)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020413-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8598354 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8596341-8596481, 8596862-8596959, 8597906-8597987, 8598272-8598354, 8598489-8598564, 8598967-8599029, 8599138-8599204, 8599825-8599943, 8600093-8600182, 8600352-8600561, 8601136-8601306, 8601791-8601858, 8601986-8602028)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020431-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8635071 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8633352-8634018, 8634282-8634476, 8634636-8634855, 8634948-8635071, 8635192-8635395, 8635765-8635935, 8636097-8636225, 8636348-8636446, 8636777-8636999, 8637310-8637409, 8637861-8637924, 8638094-8638174)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020436-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8649218 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8639195-8639333, 8640258-8640334, 8640464-8640574, 8640664-8640954, 8641317-8641385, 8641764-8641929, 8642315-8642638, 8643286-8643326, 8643473-8643568, 8643752-8643940, 8644215-8647241, 8647574-8647714, 8648593-8648786, 8649055-8649218, 8649717-8649820, 8650119-8650218, 8651569-8651650, 8651951-8652065, 8653853-8653975, 8654117-8654255, 8654378-8654595)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020437-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:8825396-8825551, 8825879-8825991, 8826392-8826566, 8826669-8826764, 8826853-8826859, 8826903-8826981, 8827301-8827401, 8827931-8828030, 8828170-8828593, 8829721-8829825)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020460-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:9008230-9008433, 9008643-9008726, 9008810-9008904, 9009239-9009316, 9009638-9009798, 9010596-9010765, 9011035-9011046, 9011714-9011926)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020488-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:9084602-9084625, 9086110-9086173, 9086288-9086319, 9086639-9086649, 9086968-9087002, 9087174-9087267, 9087558-9087606)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020502-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:9124137-9124305, 9124472-9124550, 9124815-9124974, 9125386-9125490, 9125651-9125842, 9126006-9126122, 9126308-9126460, 9127122-9127282, 9127483-9127651, 9128311-9128379, 9128621-9128833, 9129096-9129257, 9129381-9129512, 9129791-9129919, 9130074-9130216, 9130642-9130808, 9131081-9131092, 9131506-9131630, 9131930-9132116, 9132209-9132282, 9132593-9132682, 9132860-9132997)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020509-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9950861 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c9951928-9951851, c9951465-9951306, c9951159-9951061, c9950957-9950861, c9950771-9950610, c9950325-9950150, c9949759-9949647, c9949271-9949079, c9948927-9948810, c9948537-9948332, c9947231-9947014)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020605-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10145117 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c10145193-10145117, c10145072-10144709)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020619-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11834803 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c11835160-11835058, c11834846-11834803, c11834565-11834501, c11834348-11834199, c11834005-11833864, c11833738-11833598, c11833477-11833357, c11833244-11833069, c11832887-11832765, c11832530-11832343, c11832132-11831979, c11831708-11831529, c11831297-11831085, c11830988-11830756, c11830621-11830504, c11830310-11830040, c11829870-11829725, c11829550-11829542)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020767-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11834565 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c11835160-11835058, c11834846-11834803, c11834565-11834501, c11834348-11834199, c11834005-11833864, c11833738-11833598, c11833477-11833357, c11833244-11833069, c11832887-11832765, c11832530-11832343, c11832132-11831979, c11831708-11831529, c11831297-11831085, c11830988-11830756, c11830621-11830504, c11830310-11830040, c11829870-11829725, c11829550-11829542)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020767-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:11859445-11859489, 11861749-11861907, 11863533-11863720, 11864209-11864343, 11864472-11864596, 11864812-11864825, 11864974-11865058, 11865245-11865351, 11865489-11865618, 11865756-11865874, 11866035-11866181, 11866378-11866478, 11866872-11866938, 11867057-11867149, 11867264-11867332, 11867870-11867952, 11868045-11868153, 11868529-11868609, 11868824-11868948, 11869086-11869206, 11869360-11869466, 11869609-11869909, 11870151-11870420, 11870543-11871121, 11871205-11871328, 11871492-11871630, 11871757-11871861, 11872636-11872740, 11872912-11873007, 11873638-11873731, 11873846-11873901, 11874302-11874444, 11874645-11874839, 11875108-11875265, 11875390-11875510, 11875680-11875828, 11876008-11876156, 11876302-11876509, 11876769-11876905, 11877050-11877173, 11877331-11877687, 1...] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020770-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11929264 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c11941659-11940372, c11939361-11939305, c11939198-11939022, c11938773-11938678, c11938401-11938202, c11937722-11937510, c11937350-11936928, c11936609-11936027, c11935484-11935443, c11935253-11935206, c11935099-11935052, c11934935-11934888, c11934754-11934686, c11934220-11934179, c11933961-11933914, c11933710-11933663, c11933574-11933527, c11933422-11933375, c11933048-11932992, c11932894-11932844, c11932589-11932521, c11932417-11932370, c11932050-11931994, c11931440-11931396, c11931261-11931220, c11931047-11931003, c11930762-11930715, c11930567-11930523, c11930224-11930183, c11929308-11929264, c11928997-11928950, c11928811-11928776, c11928597-11928512)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020780-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11936634 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c11947374-11947353, c11945877-11945668, c11945490-11945407, c11945322-11945221, c11945096-11944953, c11944315-11944172, c11943938-11943840, c11943633-11943517, c11943330-11943211, c11943017-11942976, c11942857-11942831, c11941875-11941759, c11941631-11941527, c11941481-11940372, c11939361-11939305, c11939198-11939022, c11938773-11938678, c11938401-11937830, c11937191-11936634, c11936489-11936027, c11935481-11935443, c11935253-11935206, c11935096-11935052, c11934935-11934888, c11934754-11934686, c11934220-11934179, c11933961-11933914, c11933710-11933663, c11933574-11933527, c11933422-11933375, c11933048-11932992, c11932894-11932844, c11932589-11932521, c11932417-11932370, c11932050-11931994, c11931440-11931396, c11931261-11931220, c11931044-11931003, c11930762-11930715, ...] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020780-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11929264 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c11947374-11947353, c11945877-11945668, c11945490-11945407, c11945322-11945221, c11945096-11944953, c11944315-11944172, c11943938-11943840, c11943633-11943517, c11943330-11943211, c11943017-11942976, c11942857-11942831, c11941875-11941759, c11941631-11941527, c11941481-11940372, c11939361-11939305, c11939198-11939022, c11938773-11938678, c11938401-11937830, c11937191-11936634, c11936489-11936027, c11935481-11935443, c11935253-11935206, c11935096-11935052, c11934935-11934888, c11934754-11934686, c11934220-11934179, c11933961-11933914, c11933710-11933663, c11933574-11933527, c11933422-11933375, c11933048-11932992, c11932894-11932844, c11932589-11932521, c11932417-11932370, c11932050-11931994, c11931440-11931396, c11931261-11931220, c11931044-11931003, c11930762-11930715, ...] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020780-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12893531 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:12891816-12891853, 12892086-12892234, 12892319-12892447, 12892540-12892733, 12892988-12893068, 12893415-12893531, 12893860-12894027, 12894355-12894606)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020859-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12893531 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:12891835-12891853, 12892086-12892154, 12892319-12892447, 12892540-12892733, 12892988-12893068, 12893415-12893531, 12893860-12894027, 12894355-12894606)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020859-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:13503117-13503128, 13503349-13503456, 13505553-13505650, 13506185-13506191, 13506483-13506860)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020917-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13554166 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c13554984-13554884, c13554534-13554495, c13554346-13554166, c13554011-13553742, c13553534-13553446, c13553339-13552929, c13552779-13552563, c13552383-13552181, c13551951-13551769, c13551617-13551508, c13551190-13550945, c13550832-13550577)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020924-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13639863 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:13634150-13634266, 13635048-13635185, 13635491-13635751, 13635941-13636085, 13636365-13636503, 13636607-13636698, 13636890-13637049, 13637281-13637344, 13638012-13638100, 13638475-13638523, 13639728-13639863, 13640176-13640267, 13640484-13640730, 13640903-13641009, 13641169-13641328, 13641563-13641723, 13641903-13642087, 13642207-13642276, 13642363-13642466, 13642557-13642743, 13643084-13643177, 13643342-13643436, 13643704-13643895, 13644259-13644427, 13644566-13644636, 13644743-13644831, 13645060-13645138, 13645262-13645529, 13645656-13645869, 13646997-13647000)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_020936-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14823800 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:14821464-14821539, 14822945-14823060, 14823662-14823800, 14824952-14825041, 14825954-14826075, 14826265-14826351, 14827119-14827348, 14827512-14827691, 14828103-14828429, 14828696-14828798, 14830095-14830239, 14831522-14831664, 14833692-14833866, 14835428-14835489)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021026-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:15548055-15548263, 15548399-15548686, 15549092-15549104, 15549978-15550035, 15551662-15551705, 15552036-15552216, 15552340-15552455, 15552891-15553029, 15553807-15554009, 15554276-15554542, 15554820-15555005, 15555225-15555365, 15555948-15556046)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021078-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15700026 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:15699517-15699579, 15699677-15699729, 15699875-15700026, 15700121-15700404, 15700622-15700798)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021101-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c16301106-16300928, c16300841-16300832, c16300389-16300243, c16299898-16299851)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021147-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16473754 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:c16476748-16476612, c16476356-16476236, c16476079-16476006, c16475721-16475643, c16475556-16475513, c16475403-16475316, c16475229-16475145, c16475012-16474856, c16474587-16474512, c16474353-16474309, c16474055-16473975, c16473868-16473754, c16473636-16473481, c16473257-16473133, c16472478-16472420, c16471165-16471016, c16470372-16470240, c16469208-16469022, c16468774-16468691, c16468473-16468373, c16468108-16467997, c16467654-16467614, c16467509-16467390, c16467210-16467087, c16466956-16466792, c16466534-16466439, c16466105-16466014, c16465709-16465653, c16465386-16465345)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021162-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16655334 of lcl|scaffold_11 FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:16654369-16654522, 16654641-16654759, 16654985-16655092, 16655221-16655334, 16655546-16655722, 16656323-16656458, 16656793-16656998, 16657427-16657576, 16657737-16657858, 16657977-16658601)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021187-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_11:17372761-17372868, 17373036-17373106, 17373531-17373648, 17373835-17373947, 17374183-17374270, 17374441-17374452, 17374613-17374696, 17374849-17374929, 17375042-17375100, 17375257-17375366, 17375472-17375544, 17375748-17375832, 17376039-17376091, 17376188-17376329)] [lcl|scaffold_11: delta, dna len= 17524823] -> [gnl|ncbi|FUN_021258-T1]
ERROR: valid [SEQ_FEAT.CDSmRNAXrefLocationProblem] CDS not contained within cross-referenced mRNA DESCRIPTOR: Pub: Palmer,J.M. (5-7-2024)  BIOSEQ: lcl|scaffold_11
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 4349429 FEATURE: Gene: FUN_019999 [lcl|scaffold_11:c4349453-4339522] [lcl|scaffold_11: delta, dna len= 17524823]
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 4349429 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c4349453-4349162, c4346211-4346064, c4344695-4344576, c4342298-4342237, c4340585-4340528, c4339722-4339653, c4339587-4339522)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 257276 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:255919-255924, 256597-257276, 257297-257529)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 257297 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:255919-255924, 256597-257276, 257297-257529)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2078412 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:2068158-2068203, 2068939-2069328, 2069428-2069590, 2069723-2069875, 2070046-2070073, 2070155-2070317, 2070418-2070597, 2070676-2070772, 2070866-2071030, 2071759-2071910, 2072300-2072393, 2072921-2073164, 2073392-2073554, 2073656-2073748, 2074028-2074216, 2074388-2074661, 2074781-2074892, 2075556-2075760, 2075920-2076062, 2076159-2076316, 2077010-2077185, 2077749-2077899, 2078023-2078222, 2078332-2078412, 2078617-2078723, 2078881-2078973, 2079054-2079124, 2079241-2079317, 2079414-2079584, 2079967-2080099, 2080356-2080555, 2081198-2081427, 2081808-2081925, 2082071-2082265, 2082391-2082492, 2082574-2082652, 2083321-2083531, 2083775-2083844, 2084024-2084106, 2084258-2084379, 2085327-2085481, 2085595-2085744, 2085981-2087451)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2451134 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c2464581-2463926, c2463511-2463350, c2463069-2462953, c2462753-2462629, c2462522-2462418, c2461811-2461680, c2461572-2461466, c2461300-2461168, c2460482-2460386, c2459973-2459789, c2459671-2459603, c2459488-2459451, c2459377-2459287, c2458711-2458643, c2458497-2458460, c2457695-2457605, c2457418-2457350, c2457260-2457223, c2456163-2456073, c2455859-2455750, c2455646-2455448, c2455357-2455317, c2455203-2455113, c2453750-2453664, c2451223-2451134, c2451014-2450886, c2450785-2450696, c2450489-2450397, c2450310-2450242, c2450134-2450051, c2448055-2447972, c2447789-2447697, c2447330-2447220, c2447072-2445790)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2825784 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c2831473-2831420, c2830828-2830575, c2830070-2829992, c2829547-2829437, c2828129-2828005, c2827464-2827326, c2826947-2826885, c2826329-2826206, c2825891-2825784, c2825645-2825557, c2825196-2825098, c2824824-2824667, c2824543-2824444, c2824340-2824212, c2823741-2823561, c2823423-2823362, c2822954-2822844, c2821783-2821718, c2821638-2821537, c2821456-2821393, c2821291-2821167, c2820833-2820781, c2820629-2820527, c2820423-2820375, c2820092-2819938, c2819328-2819229, c2818969-2818866, c2818762-2818682, c2818447-2818266, c2817915-2817710, c2817468-2817378, c2817204-2817052, c2816898-2816798, c2816244-2816148, c2815703-2815555, c2815210-2815155, c2815056-2814960, c2814491-2814424, c2814263-2814116, c2813642-2813588, c2812447-2812311, c2811863-2811751)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2842969 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:2839224-2839309, 2839536-2840509, 2840660-2841193, 2841451-2841604, 2842180-2842692, 2842894-2842969, 2843154-2843342, 2843551-2843680, 2844308-2844701)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3508187 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:3477296-3477376, 3477900-3477977, 3478259-3478351, 3478464-3478675, 3478922-3479075, 3479098-3479154, 3479383-3479502, 3480966-3481079, 3481319-3481456, 3481743-3481907, 3482058-3482170, 3482466-3482634, 3482875-3482971, 3483083-3483276, 3483481-3483645, 3483876-3484016, 3484129-3484230, 3484374-3484550, 3484767-3484925, 3485051-3486604, 3486646-3486803, 3486941-3487860, 3487872-3488071, 3488163-3488297, 3489234-3489427, 3489628-3489703, 3489783-3489889, 3489974-3490097, 3490189-3490479, 3490664-3491259, 3491381-3491536, 3491790-3491940, 3492090-3492248, 3493649-3493816, 3493907-3494008, 3494130-3494330, 3494630-3494837, 3495173-3495285, 3495408-3495610, 3495703-3495810, 3495903-3496182, 3496299-3496619, 3496723-3497052, 3497229-3497549, 3497673-3498002, 3498112-3498441...] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3508187 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:3477296-3477376, 3477900-3477977, 3478259-3478351, 3478464-3478675, 3478922-3479075, 3479098-3479154, 3479383-3479502, 3480966-3481079, 3481319-3481456, 3481743-3481907, 3482058-3482170, 3482466-3482634, 3482875-3482971, 3483083-3483276, 3483481-3483645, 3483876-3484016, 3484129-3484230, 3484374-3484550, 3484767-3484925, 3485051-3486604, 3486646-3486803, 3486941-3487860, 3487872-3488071, 3488163-3488297, 3489234-3489427, 3489628-3489703, 3489783-3489889, 3489974-3490097, 3490189-3490479, 3490664-3491259, 3491381-3491536, 3491790-3491940, 3492090-3492248, 3493649-3493816, 3493907-3494008, 3494130-3494330, 3494630-3494837, 3495173-3495285, 3495408-3495610, 3495703-3495810, 3495903-3496182, 3496299-3496619, 3496723-3497052, 3497229-3497549, 3498551-3498895, 3499039-3499217...] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4339587 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c4349453-4349162, c4346211-4346064, c4344695-4344576, c4342298-4342237, c4340585-4340528, c4339722-4339653, c4339587-4339522)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4656646 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c4661705-4661578, c4658917-4658741, c4658485-4658344, c4658119-4657978, c4657079-4656946, c4656821-4656646, c4656434-4656387, c4656195-4656074, c4655826-4655758, c4655608-4655468, c4655310-4655203, c4654957-4654871, c4654645-4654476)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4702480 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c4707421-4707296, c4706934-4706723, c4706436-4706328, c4706209-4706060, c4705778-4705607, c4705404-4705304, c4704950-4704701, c4704450-4704295, c4703788-4703538, c4703427-4703316, c4703241-4703089, c4702954-4702855, c4702589-4702480, c4702296-4702133, c4701932-4701769, c4701409-4701304, c4701198-4701008, c4700355-4700196, c4699999-4699810, c4699627-4699458, c4698531-4698387, c4698288-4698109, c4697862-4697632, c4697491-4697244, c4696979-4696800, c4696699-4696465, c4696338-4696099, c4695943-4695816, c4695703-4695556, c4695475-4695200, c4695006-4694719, c4694485-4694334, c4693754-4693544, c4693379-4691326)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4756928 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:4754999-4755175, 4755714-4755808, 4755905-4755986, 4756088-4756243, 4756447-4756625, 4756834-4756928, 4757260-4758256)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4820464 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:4818828-4819286, 4819405-4819495, 4819590-4819717, 4819847-4819926, 4820278-4820464, 4820576-4820640, 4820809-4820845, 4821045-4821174, 4821399-4822600)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4820576 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:4818828-4819286, 4819405-4819495, 4819590-4819717, 4819847-4819926, 4820278-4820464, 4820576-4820640, 4820809-4820845, 4821045-4821174, 4821399-4822600)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5513154 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c5518714-5518659, c5518310-5518155, c5517230-5516952, c5515482-5515324, c5514959-5514858, c5514758-5514671, c5514530-5514396, c5514202-5514130, c5513992-5513826, c5513724-5513629, c5513530-5513392, c5513300-5513154, c5513051-5512956, c5512851-5512627, c5512440-5512275, c5512185-5512081, c5511071-5510983, c5510762-5510662, c5510566-5510119, c5509816-5509647, c5509403-5509249, c5509034-5508874, c5508616-5508536, c5508395-5508148, c5507893-5507679, c5507542-5507226, c5507021-5506846, c5505803-5505716, c5505460-5505210)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5989065 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:5986762-5986893, 5987694-5987783, 5987941-5987992, 5988147-5988316, 5988533-5988626, 5988935-5989065, 5989160-5989256, 5989342-5989435, 5989583-5989664, 5989765-5989869, 5990056-5990128, 5990337-5990470)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6316145 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:6315436-6316145, 6316248-6316415, 6316684-6316767, 6316878-6316961, 6317084-6317165, 6317318-6319633)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6596260 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c6600536-6600468, c6598028-6597690, c6597434-6597276, c6597047-6596940, c6596416-6596260, c6595747-6595601, c6595246-6595202, c6594946-6594867, c6594478-6594366, c6593610-6593427, c6593179-6593095, c6592568-6592423, c6591394-6591304, c6591192-6591044, c6590808-6590708, c6590528-6590459, c6590215-6590097, c6589871-6586650)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7085821 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:7080115-7080228, 7080733-7080925, 7081008-7081500, 7081788-7081982, 7082517-7082758, 7082901-7083023, 7083158-7083236, 7083343-7083463, 7083943-7084052, 7084374-7084463, 7084822-7084897, 7085034-7085239, 7085471-7085600, 7085678-7085821, 7086120-7086286, 7086591-7086672, 7086783-7086872, 7087008-7087062, 7087204-7087340, 7087623-7087726, 7087854-7088003, 7088691-7088754, 7088960-7089038, 7089680-7089891, 7090155-7090262, 7090395-7090458, 7090854-7091035, 7091126-7091233, 7091554-7092671)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7140037 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:7132532-7133090, 7135269-7135436, 7137853-7138004, 7138188-7138361, 7139230-7139327, 7139675-7139755, 7139922-7140037, 7140163-7140275, 7140414-7140601, 7140725-7140842, 7141213-7141371, 7141816-7142118, 7142398-7142548, 7142837-7143707, 7143828-7143965, 7144086-7144845, 7144987-7145189, 7145702-7145792, 7145880-7146026, 7146256-7146519, 7146676-7146900, 7147087-7147176, 7147414-7147704, 7148333-7148463, 7148869-7149073, 7149327-7149550, 7150043-7150193, 7150519-7150763, 7151013-7151151, 7151526-7151610, 7152054-7152250, 7152394-7152479, 7152779-7152842, 7152983-7153236, 7153501-7153674, 7153863-7153905, 7154131-7156160)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8050350 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:8050258-8050350, 8050450-8050590, 8050794-8051061, 8051175-8051387, 8051530-8051726, 8051991-8052585)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8377825 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c8378979-8378977, c8378098-8378002, c8377874-8377825, c8377444-8377361)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8426295 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:8420486-8420532, 8420993-8421082, 8421574-8421699, 8423076-8423235, 8423619-8423692, 8424153-8424233, 8424829-8424888, 8425345-8425490, 8425652-8425742, 8425988-8426059, 8426171-8426295, 8426464-8426596, 8427019-8427123, 8427521-8427627, 8427849-8428003, 8428296-8428406, 8428776-8428884, 8429328-8430883)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8426295 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:8420486-8420532, 8420993-8421082, 8421574-8421699, 8423076-8423235, 8423619-8423692, 8424153-8424233, 8424829-8424888, 8425345-8425490, 8425652-8425742, 8425988-8426059, 8426171-8426295, 8426464-8426596, 8427019-8427123, 8427521-8427627, 8427849-8428003, 8428296-8428465)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8598354 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:8595856-8595943, 8596333-8596481, 8596862-8596959, 8597906-8597987, 8598272-8598354, 8598489-8598564, 8598967-8599029, 8599138-8599204, 8599825-8599943, 8600093-8600182, 8600352-8600561, 8601136-8601306, 8601791-8601858, 8601986-8602482)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8635071 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:8632804-8632968, 8633344-8634018, 8634282-8634476, 8634636-8634855, 8634948-8635071, 8635192-8635395, 8635765-8635935, 8636097-8636225, 8636348-8636446, 8636777-8636999, 8637310-8637409, 8637861-8637924, 8638094-8638560)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8649218 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:8638745-8639333, 8640258-8640334, 8640464-8640574, 8640664-8640954, 8641317-8641385, 8641764-8641929, 8642315-8642638, 8643286-8643326, 8643473-8643568, 8643752-8643940, 8644215-8647241, 8647574-8647714, 8648593-8648786, 8649055-8649218, 8649717-8649820, 8650119-8650218, 8651569-8651650, 8651951-8652065, 8653853-8653975, 8654117-8654255, 8654378-8655663)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9950861 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c9951960-9951851, c9951465-9951306, c9951159-9951061, c9950957-9950861, c9950771-9950610, c9950325-9950150, c9949759-9949647, c9949271-9949079, c9948927-9948810, c9948537-9948332, c9947231-9946912)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10145117 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c10145462-10145117, c10145072-10143805)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11834803 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c11836237-11836120, c11835831-11835759, c11835209-11835058, c11834846-11834803, c11834565-11834501, c11834348-11834199, c11834005-11833864, c11833738-11833598, c11833477-11833357, c11833244-11833069, c11832887-11832765, c11832530-11832343, c11832132-11831979, c11831708-11831529, c11831297-11831085, c11830988-11830756, c11830621-11830504, c11830310-11830040, c11829870-11829725, c11829550-11828359)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11834565 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c11836237-11836120, c11835831-11835759, c11835209-11835058, c11834846-11834803, c11834565-11834501, c11834348-11834199, c11834005-11833864, c11833738-11833598, c11833477-11833357, c11833244-11833069, c11832887-11832765, c11832530-11832343, c11832132-11831979, c11831708-11831529, c11831297-11831085, c11830988-11830756, c11830621-11830504, c11830310-11830040, c11829870-11829725, c11829550-11828359)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11929264 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c11941970-11940372, c11939361-11939305, c11939198-11939022, c11938773-11938678, c11938401-11938202, c11937722-11937510, c11937350-11936928, c11936609-11936027, c11935484-11935443, c11935253-11935206, c11935099-11935052, c11934935-11934888, c11934754-11934686, c11934220-11934179, c11933961-11933914, c11933710-11933663, c11933574-11933527, c11933422-11933375, c11933048-11932992, c11932894-11932844, c11932589-11932521, c11932417-11932370, c11932050-11931994, c11931440-11931396, c11931261-11931220, c11931047-11931003, c11930762-11930715, c11930567-11930523, c11930224-11930183, c11929308-11929264, c11928997-11928950, c11928811-11928776, c11928597-11924842)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11936634 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c11947781-11947353, c11945877-11945668, c11945490-11945407, c11945322-11945221, c11945096-11944953, c11944315-11944172, c11943938-11943840, c11943633-11943517, c11943330-11943211, c11943017-11942976, c11942857-11942831, c11941875-11941759, c11941631-11941527, c11941481-11940372, c11939361-11939305, c11939198-11939022, c11938773-11938678, c11938401-11937830, c11937191-11936634, c11936489-11936027, c11935481-11935443, c11935253-11935206, c11935096-11935052, c11934935-11934888, c11934754-11934686, c11934220-11934179, c11933961-11933914, c11933710-11933663, c11933574-11933527, c11933422-11933375, c11933048-11932992, c11932894-11932844, c11932589-11932521, c11932417-11932370, c11932050-11931994, c11931440-11931396, c11931261-11931220, c11931044-11931003, c11930762-11930715, ...] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11929264 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c11947781-11947353, c11945877-11945668, c11945490-11945407, c11945322-11945221, c11945096-11944953, c11944315-11944172, c11943938-11943840, c11943633-11943517, c11943330-11943211, c11943017-11942976, c11942857-11942831, c11941875-11941759, c11941631-11941527, c11941481-11940372, c11939361-11939305, c11939198-11939022, c11938773-11938678, c11938401-11937830, c11937191-11936634, c11936489-11936027, c11935481-11935443, c11935253-11935206, c11935096-11935052, c11934935-11934888, c11934754-11934686, c11934220-11934179, c11933961-11933914, c11933710-11933663, c11933574-11933527, c11933422-11933375, c11933048-11932992, c11932894-11932844, c11932589-11932521, c11932417-11932370, c11932050-11931994, c11931440-11931396, c11931261-11931220, c11931044-11931003, c11930762-11930715, ...] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12893531 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:12891646-12891853, 12892086-12892234, 12892319-12892447, 12892540-12892733, 12892988-12893068, 12893415-12893531, 12893860-12894027, 12894355-12894606)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12893531 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:12891646-12891853, 12892086-12892154, 12892319-12892447, 12892540-12892733, 12892988-12893068, 12893415-12893531, 12893860-12894027, 12894355-12894606)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13554166 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c13555009-13554884, c13554534-13554495, c13554346-13554166, c13554011-13553742, c13553534-13553446, c13553339-13552929, c13552779-13552563, c13552383-13552181, c13551951-13551769, c13551617-13551508, c13551190-13550945, c13550832-13550396)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13639863 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:13634150-13634266, 13635048-13635185, 13635491-13635751, 13635941-13636085, 13636365-13636503, 13636607-13636698, 13636890-13637049, 13637281-13637344, 13638012-13638100, 13638475-13638523, 13639728-13639863, 13640176-13640267, 13640484-13640730, 13640903-13641009, 13641169-13641328, 13641563-13641723, 13641903-13642087, 13642207-13642276, 13642363-13642466, 13642557-13642743, 13643084-13643177, 13643342-13643436, 13643704-13643895, 13644259-13644427, 13644566-13644636, 13644743-13644831, 13645060-13645138, 13645262-13645529, 13645656-13645869, 13646997-13648377)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14794935 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:14791725-14791819, 14792347-14792977, 14793311-14794935, 14794957-14795004)] [lcl|scaffold_11: delta, dna len= 17524823]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14794957 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:14791725-14791819, 14792347-14792977, 14793311-14794935, 14794957-14795004)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14823800 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:14821464-14821539, 14822945-14823060, 14823662-14823800, 14824952-14825041, 14825954-14826075, 14826265-14826351, 14827119-14827348, 14827512-14827691, 14828103-14828429, 14828696-14828798, 14830095-14830239, 14831522-14831664, 14833692-14833866, 14835428-14835489)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15700026 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:15699428-15699579, 15699677-15699729, 15699875-15700026, 15700121-15700404, 15700622-15700935)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16473754 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:c16476748-16476612, c16476356-16476236, c16476079-16476006, c16475721-16475643, c16475556-16475513, c16475403-16475316, c16475229-16475145, c16475012-16474856, c16474587-16474512, c16474353-16474309, c16474055-16473975, c16473868-16473754, c16473636-16473481, c16473257-16473133, c16472478-16472420, c16471165-16471016, c16470372-16470240, c16469208-16469022, c16468774-16468691, c16468473-16468373, c16468108-16467997, c16467654-16467614, c16467509-16467390, c16467210-16467087, c16466956-16466792, c16466534-16466439, c16466105-16466014, c16465709-16465653, c16465386-16465345)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16655334 of lcl|scaffold_11 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_11:16653366-16653501, 16654365-16654522, 16654641-16654759, 16654985-16655092, 16655221-16655334, 16655546-16655722, 16656323-16656458, 16656793-16656998, 16657427-16657576, 16657737-16657858, 16657977-16659384)] [lcl|scaffold_11: delta, dna len= 17524823]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 116243 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:116135-116243, 116323-116382, 116578-116735, 117004-117123, 117415-117591, 117818-117925)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028206-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 442565 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c444950-444902, c443986-443819, c442633-442565, c441991-441815, c440745-440701, c439723-439679, c439196-437388, c436164-436108, c435520-435458, c435370-435335, c434563-434519, c434056-434015, c433621-433589, c433487-433452, c433380-433327, c433216-433109, c432536-432451, c432335-432249, c432164-432014, c431611-431475, c430312-430214, c430141-430052, c429983-429846, c429739-429604, c429512-429421, c428795-428662, c428561-428411)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028240-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:548771-548833, 549116-549124, 549228-549350, 549514-549531)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028252-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 810035 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c816076-815933, c815043-814947, c814750-814663, c812433-812314, c811081-810922, c810793-810704, c810631-810576, c810466-810379, c810290-810260, c810168-810035, c809773-809729)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028269-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1782167 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:1775474-1775518, 1776388-1776486, 1776643-1776754, 1776893-1777011, 1777144-1777214, 1777368-1777456, 1777656-1777691, 1777811-1777893, 1778127-1778292, 1778892-1779103, 1779585-1779628, 1781017-1781121, 1781218-1781284, 1781471-1781634, 1782005-1782167, 1782266-1782345, 1782432-1782519, 1782660-1782812, 1783081-1783324, 1783655-1783741, 1783858-1783906, 1784275-1784422, 1784680-1784790, 1784915-1785039, 1785139-1785351, 1785576-1785714)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028328-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1800526 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c1803586-1803321, c1803239-1803140, c1802118-1801993, c1801782-1801621, c1801252-1801088, c1800985-1800844, c1800647-1800526, c1800228-1800122, c1799934-1799820, c1799639-1799562, c1798790-1798652, c1798367-1798260, c1797270-1797172, c1796874-1796837)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028331-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1876861 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:1873122-1873129, 1874427-1874448, 1875942-1876011, 1876689-1876861, 1877111-1877251, 1877458-1877622, 1878098-1878184, 1878451-1878640, 1879159-1879274, 1881063-1881096, 1881631-1881723, 1882018-1882234, 1882400-1882477, 1882749-1882878)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028336-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2204775 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:2189420-2189459, 2189736-2189820, 2190363-2190517, 2191189-2191399, 2191722-2191891, 2192720-2192923, 2195136-2195317, 2195595-2195706, 2196001-2196127, 2196298-2196400, 2196485-2196582, 2196677-2196816, 2197237-2197424, 2197678-2197801, 2200076-2200239, 2200356-2200457, 2200666-2200821, 2200931-2201081, 2201278-2201402, 2201927-2202039, 2202158-2202292, 2202450-2202580, 2202736-2202872, 2203118-2203251, 2203432-2203607, 2203754-2203856, 2204214-2204439, 2204664-2204775, 2205106-2205241, 2205408-2205520, 2205754-2205965, 2206301-2206398, 2206626-2206713, 2206821-2206954, 2207138-2207255)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028368-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:3621002-3621052, 3622213-3622266, 3622388-3622441, 3622987-3623040, 3623194-3623247, 3624347-3624400, 3624483-3624577, 3625163-3625216, 3625320-3625364, 3626078-3626131, 3626576-3626620, 3626807-3626820, 3627323-3627422, 3627625-3627669, 3627848-3627901, 3628246-3628270)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028507-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3711064 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c3714932-3714777, c3714583-3714468, c3714317-3714170, c3713955-3713886, c3713228-3713099, c3712904-3712784, c3712610-3712548, c3712177-3712071, c3711811-3711670, c3711405-3711271, c3711167-3711064, c3710572-3710323, c3710122-3710003)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028512-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3785161 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:3784191-3784193, 3784649-3784754, 3784971-3785161, 3785643-3785770, 3785999-3786190, 3787102-3787117)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028524-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3979128 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c3983841-3983124, c3982865-3980551, c3980155-3980014, c3979814-3979716, c3979610-3979562, c3979483-3979347, c3979231-3979128, c3978943-3978833, c3978687-3978634, c3978421-3978218, c3978131-3978058, c3977962-3977756, c3977614-3977569, c3977462-3977334, c3977162-3977059, c3976770-3976683, c3976472-3976326)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028548-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4645893 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c4648587-4648500, c4648238-4648072, c4647872-4646721, c4646506-4646365, c4646193-4646080, c4645994-4645893, c4645743-4645586)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028634-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4653682 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:4650702-4650734, 4651374-4651505, 4652296-4652461, 4652752-4652853, 4652963-4653072, 4653532-4653682, 4653992-4654099, 4654504-4654677, 4654860-4655012, 4655203-4655335, 4655552-4655614, 4656083-4656195, 4656442-4656597, 4657177-4657328, 4657428-4657554, 4657785-4657858, 4658486-4658572, 4658702-4658845)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028635-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:7527740-7527820, 7527887-7527896, 7528571-7528722, 7528850-7528923, 7529148-7529306, 7529881-7529992, 7530070-7530216, 7530329-7530434, 7530797-7530954)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028876-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8589715 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:8585385-8585465, 8585567-8585656, 8586286-8586336, 8587432-8587593, 8587793-8587885, 8589188-8589401, 8589525-8589715, 8590449-8590563, 8591309-8591559, 8591818-8592117)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_028995-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8638789 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:8638421-8638789, 8639737-8639808, 8640050-8640106, 8640659-8640709, 8640953-8641078, 8642378-8642428, 8643425-8643584, 8643659-8643875, 8644028-8644117, 8644234-8644416, 8645174-8645323, 8645905-8646044, 8646176-8646213, 8646705-8646779, 8648673-8648727, 8649090-8649106)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029002-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9330166 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:9329014-9329251, 9329477-9329600, 9330000-9330166, 9330304-9330432, 9330529-9330778, 9330904-9331021, 9331755-9331907, 9332371-9332589, 9332763-9332867, 9332972-9333109, 9333258-9333389)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029055-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9330778 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:9329014-9329251, 9329477-9329600, 9330000-9330166, 9330304-9330432, 9330529-9330778, 9330904-9331021, 9331755-9331907, 9332371-9332589, 9332763-9332867, 9332972-9333109, 9333258-9333389)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029055-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9425471 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:9425415-9425471, 9425845-9425953, 9426111-9426221, 9426802-9427046, 9427199-9428013, 9429012-9429081)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029064-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c9628853-9628784, c9627859-9627726, c9627594-9627498, c9627310-9627165, c9627065-9626946, c9626766-9626690, c9626574-9626496, c9625916-9625823, c9625484-9625470, c9625300-9625233)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029086-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9632687 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c9654463-9654113, c9653726-9653661, c9652489-9652388, c9652036-9651926, c9651774-9651664, c9651499-9651389, c9651267-9651157, c9650941-9650834, c9650713-9650603, c9650502-9650395, c9649955-9649845, c9649439-9649329, c9649112-9649002, c9648894-9648784, c9648662-9648552, c9648447-9648337, c9648162-9648055, c9647633-9647523, c9647433-9647323, c9647193-9647083, c9646466-9646356, c9646124-9646017, c9645679-9645569, c9645471-9645361, c9645058-9644951, c9643991-9643881, c9643701-9643591, c9643460-9643350, c9643237-9643127, c9642985-9642875, c9642608-9642498, c9640854-9640744, c9640594-9640484, c9640385-9640275, c9640036-9639926, c9639601-9639494, c9639318-9639190, c9638852-9638742, c9638217-9638107, c9637583-9637482, c9637165-9637061, c9636791-9636678, c9635914-9635810, c96357...] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029087-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10155726 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c10158262-10158007, c10157640-10157524, c10157369-10157266, c10157182-10157081, c10156836-10156795, c10156682-10156611, c10156439-10156386, c10155836-10155726, c10155537-10155469)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029133-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10485579 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:10482939-10483043, 10485045-10485257, 10485448-10485579, 10486644-10486787, 10488276-10488327, 10488447-10488499)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029164-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10486644 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:10482939-10483043, 10485045-10485257, 10485448-10485579, 10486644-10486787, 10488276-10488327, 10488447-10488499)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029164-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c11189399-11189318, c11188265-11188162, c11187791-11187742, c11184929-<11184853)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029242-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11184853 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c11189399-11189318, c11188265-11188162, c11187791-11187742, c11184929-<11184853)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029242-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11820108 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:11817855-11817866, 11819085-11819141, 11820001-11820108, 11822598-11822686, 11822790-11822894, 11823182-11823209)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029311-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:11825939-11826033, 11826119-11826210, 11826594-11826646, 11827861-11827893, 11827981-11828081, 11828287-11828296, 11829044-11829163, 11829416-11829508)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029313-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12120086 of lcl|scaffold_16 FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c12120786-12120605, c12120249-12120086, c12119881-12119702, c12119376-12119258, c12119093-12119028, c12118825-12118625)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029349-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:13170837-13170899, 13172066-13172221, 13173261-13173273, 13173772-13173951, 13174086-13174273, 13174310-13174454, 13175133-13175299)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029416-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:13337295-13337521, 13339161-13339282, 13339679-13339777, 13339886-13339992, 13340330-13340454, 13340716-13340846, 13341003-13341122, 13341762-13341802, 13342187-13342246, 13342533-13342625, 13343416-13343471, 13346580-13346658, 13347114-13347296, 13347659-13347798, 13348257-13348356, 13348610-13348702, 13348779-13348788, 13348864-13349012, 13349071-13349122, 13349155-13349375)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029433-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c13714155-13713975, c13712504-13712350, c13710418-13710408, c13710128-13709867)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029460-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_16:c14701172-14701122, c14700838-14700825, c14700731-14700663, c14700037-14699911)] [lcl|scaffold_16: delta, dna len= 15312822] -> [gnl|ncbi|FUN_029543-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 116243 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:116135-116243, 116323-116382, 116578-116735, 117004-117123, 117415-117591, 117818-117925)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 442565 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c444950-444902, c443986-443819, c442633-442565, c441991-441815, c440745-440701, c439723-439679, c439196-437388, c436164-436108, c435520-435458, c435370-435335, c434563-434519, c434056-434015, c433621-433589, c433487-433452, c433380-433327, c433216-433109, c432536-432451, c432335-432249, c432164-432014, c431611-431475, c430312-430214, c430141-430052, c429983-429846, c429739-429604, c429512-429421, c428795-428662, c428561-427576)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 810035 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c816076-815933, c815043-814947, c814750-814663, c812433-812314, c811081-810922, c810793-810704, c810631-810576, c810466-810379, c810290-810260, c810168-810035, c809773-809729)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1782167 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:1775463-1775518, 1776388-1776486, 1776643-1776754, 1776893-1777011, 1777144-1777214, 1777368-1777456, 1777656-1777691, 1777811-1777893, 1778127-1778292, 1778892-1779103, 1779585-1779628, 1781017-1781121, 1781218-1781284, 1781471-1781634, 1782005-1782167, 1782266-1782345, 1782432-1782519, 1782660-1782812, 1783081-1783324, 1783655-1783741, 1783858-1783906, 1784275-1784422, 1784680-1784790, 1784915-1785039, 1785139-1785351, 1785576-1786061)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1800526 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c1803672-1803321, c1803239-1803140, c1802118-1801993, c1801782-1801621, c1801252-1801088, c1800985-1800844, c1800647-1800526, c1800228-1800122, c1799934-1799820, c1799639-1799562, c1798790-1798652, c1798367-1798260, c1797270-1797172, c1796874-1796837)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1876861 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:1873032-1873129, 1874427-1874448, 1875942-1876011, 1876689-1876861, 1877111-1877251, 1877458-1877622, 1878098-1878184, 1878451-1878640, 1879159-1879274, 1881063-1881096, 1881631-1881723, 1882018-1882234, 1882400-1882477, 1882749-1884654)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2204775 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:2189420-2189459, 2189736-2189820, 2190363-2190517, 2191189-2191399, 2191722-2191891, 2192720-2192923, 2195136-2195317, 2195595-2195706, 2196001-2196127, 2196298-2196400, 2196485-2196582, 2196677-2196816, 2197237-2197424, 2197678-2197801, 2200076-2200239, 2200356-2200457, 2200666-2200821, 2200931-2201081, 2201278-2201402, 2201927-2202039, 2202158-2202292, 2202450-2202580, 2202736-2202872, 2203118-2203251, 2203432-2203607, 2203754-2203856, 2204214-2204439, 2204664-2204775, 2205106-2205241, 2205408-2205520, 2205754-2205965, 2206301-2206398, 2206626-2206713, 2206821-2206954, 2207138-2208336)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3711064 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c3714932-3714777, c3714583-3714468, c3714317-3714170, c3713955-3713886, c3713228-3713099, c3712904-3712784, c3712610-3712548, c3712177-3712071, c3711811-3711670, c3711405-3711271, c3711167-3711064, c3710572-3710323, c3710122-3709871)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3785161 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:3784191-3784193, 3784649-3784754, 3784971-3785161, 3785643-3785770, 3785999-3786190, 3787102-3787117)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3979128 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c3984914-3984783, c3983947-3983124, c3982865-3980551, c3980155-3980014, c3979814-3979716, c3979610-3979562, c3979483-3979347, c3979231-3979128, c3978943-3978833, c3978687-3978634, c3978421-3978218, c3978131-3978058, c3977962-3977756, c3977614-3977569, c3977462-3977334, c3977162-3977059, c3976770-3976683, c3976472-3974917)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4161824 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:4152811-4153304, 4154917-4154976, 4155182-4155343, 4155432-4155515, 4156034-4156260, 4156646-4156711, 4156860-4156976, 4157163-4157246, 4157510-4157622, 4157800-4157893, 4158108-4158236, 4158508-4158609, 4158934-4159011, 4159149-4159252, 4159348-4159406, 4159532-4159586, 4159825-4159892, 4160018-4160148, 4160302-4160367, 4160755-4160859, 4161021-4161824, 4161894-4161898)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4161894 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:4152811-4153304, 4154917-4154976, 4155182-4155343, 4155432-4155515, 4156034-4156260, 4156646-4156711, 4156860-4156976, 4157163-4157246, 4157510-4157622, 4157800-4157893, 4158108-4158236, 4158508-4158609, 4158934-4159011, 4159149-4159252, 4159348-4159406, 4159532-4159586, 4159825-4159892, 4160018-4160148, 4160302-4160367, 4160755-4160859, 4161021-4161824, 4161894-4161898)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4645893 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c4648587-4648500, c4648238-4648072, c4647872-4646721, c4646506-4646365, c4646193-4646080, c4645994-4645893, c4645743-4645369)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4653682 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:4650561-4650734, 4651374-4651505, 4652296-4652461, 4652752-4652853, 4652963-4653072, 4653532-4653682, 4653992-4654099, 4654504-4654677, 4654860-4655012, 4655203-4655335, 4655552-4655614, 4656083-4656195, 4656442-4656597, 4657177-4657328, 4657428-4657554, 4657785-4657858, 4658486-4658572, 4658702-4659599)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5927171 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:5927114-5927171, 5928026-5928170, 5928393-5928446, 5928576-5928650, 5928769-5928915, 5929023-5929138, 5929239-5929396, 5929539-5929692, 5930786-5931006, 5931222-5931373, 5931573-5931926)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6142468 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:6142461-6142468, 6142620-6143200, 6143494-6143668, 6143792-6143875, 6144210-6144351, 6144918-6145008, 6145174-6145513, 6145695-6145810, 6146104-6146274, 6147056-6147791)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6142620 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:6142461-6142468, 6142620-6143200, 6143494-6143668, 6143792-6143875, 6144210-6144351, 6144918-6145008, 6145174-6145513, 6145695-6145810, 6146104-6146274, 6147056-6147791)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8589715 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:8584341-8584386, 8584929-8585014, 8585370-8585465, 8585567-8585656, 8586286-8586336, 8587432-8587593, 8587793-8587885, 8589188-8589401, 8589525-8589715, 8590449-8590563, 8591309-8591559, 8591818-8592471)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8638789 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:8638421-8638789, 8639737-8639808, 8640050-8640106, 8640659-8640709, 8640953-8641078, 8642378-8642428, 8643425-8643584, 8643659-8643875, 8644028-8644117, 8644234-8644416, 8645174-8645323, 8645905-8646044, 8646176-8646213, 8646705-8646779, 8648673-8648727, 8649090-8649106)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8910420 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:8901715-8901721, 8901951-8902049, 8902651-8902708, 8902959-8903012, 8905222-8905278, 8908134-8908263, 8909110-8909178, 8910103-8910420, 8910442-8912420)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8910442 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:8901715-8901721, 8901951-8902049, 8902651-8902708, 8902959-8903012, 8905222-8905278, 8908134-8908263, 8909110-8909178, 8910103-8910420, 8910442-8912420)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9330166 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:9329014-9329251, 9329477-9329600, 9330000-9330166, 9330304-9330432, 9330529-9330778, 9330904-9331021, 9331755-9331907, 9332371-9332589, 9332763-9332867, 9332972-9333109, 9333258-9334438)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9330778 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:9329014-9329251, 9329477-9329600, 9330000-9330166, 9330304-9330432, 9330529-9330778, 9330904-9331021, 9331755-9331907, 9332371-9332589, 9332763-9332867, 9332972-9333109, 9333258-9334438)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9425471 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:9425415-9425471, 9425845-9425953, 9426111-9426221, 9426802-9427046, 9427199-9428013, 9429012-9429207)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9632687 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c9654463-9654113, c9653726-9653661, c9652489-9652388, c9652036-9651926, c9651774-9651664, c9651499-9651389, c9651267-9651157, c9650941-9650834, c9650713-9650603, c9650502-9650395, c9649955-9649845, c9649439-9649329, c9649112-9649002, c9648894-9648784, c9648662-9648552, c9648447-9648337, c9648162-9648055, c9647633-9647523, c9647433-9647323, c9647193-9647083, c9646466-9646356, c9646124-9646017, c9645679-9645569, c9645471-9645361, c9645058-9644951, c9643991-9643881, c9643701-9643591, c9643460-9643350, c9643237-9643127, c9642985-9642875, c9642608-9642498, c9640854-9640744, c9640594-9640484, c9640385-9640275, c9640036-9639926, c9639601-9639494, c9639318-9639190, c9638852-9638742, c9638217-9638107, c9637583-9637482, c9637165-9637061, c9636791-9636678, c9635914-9635810, c96357...] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10155726 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c10158358-10158007, c10157640-10157524, c10157369-10157266, c10157182-10157081, c10156836-10156795, c10156682-10156611, c10156439-10156386, c10155836-10155726, c10155537-10155068)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10485579 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:10482939-10483043, 10485045-10485257, 10485448-10485579, 10486644-10486787, 10488276-10488327, 10488447-10488499)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10486644 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:10482939-10483043, 10485045-10485257, 10485448-10485579, 10486644-10486787, 10488276-10488327, 10488447-10488499)] [lcl|scaffold_16: delta, dna len= 15312822]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11184853 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c11189420-11189318, c11188265-11188162, c11187791-11187742, c11184929-<11184853)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11820108 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:11817855-11817866, 11819085-11819141, 11820001-11820108, 11822598-11822686, 11822790-11822894, 11823182-11823209)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12120086 of lcl|scaffold_16 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_16:c12121761-12121580, c12120816-12120605, c12120249-12120086, c12119881-12119702, c12119376-12119258, c12119093-12119028, c12118825-12116740)] [lcl|scaffold_16: delta, dna len= 15312822]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 266123 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:264087-264155, 264254-264334, 264494-264569, 265244-265409, 265504-265556, 265672-265794, 266016-266123, 266212-266329, 266526-266636, 266746-266912, 267289-267449)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035129-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 266123 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:264087-264155, 264254-264334, 264494-264569, 265244-265409, 265504-265556, 265672-265794, 266016-266123, 266212-266329, 266526-266636, 266840-266912, 267289-267411)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035129-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 330155 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c336172-336159, c335562-335542, c334696-334605, c331969-331871, c331767-331718, c331179-331122, c330998-330799, c330232-330155, c329325-329206, c329108-328989, c328611-328492, c328290-328207, c328035-327925, c327660-327562, c326818-326776, c326646-326541, c326344-326207, c325530-325498, c324475-324361, c324072-323967, c322927-322709, c322115-321965, c321278-321243, c321064-320898, c320809-320663, c320505-320420, c320332-320207, c319825-319711, c319524-319424, c319086-319009, c318791-318716, c317510-317343, c316384-316297, c316208-316131, c316030-315936, c315776-315498, c315310-315005, c314811-314582, c314194-314122, c313668-313658)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035135-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 455294 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c457757-457734, c457510-457414, c457264-457191, c457058-456931, c456286-456212, c456025-455932, c455721-455593, c455412-455294, c455194-455128, c455018-454958, c454808-454723, c454311-454222)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035148-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 464054 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c464200-464054, c463914-463779, c463677-463514, c463404-463157, c462953-462752, c462669-462518, c461879-461693, c461597-461454, c461203-461006, c460652-460491, c460328-460195, c460046-459844, c459674-459503, c459079-458857, c458556-458389)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035149-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 461693 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c464200-464054, c463914-463779, c463677-463514, c463404-463157, c462953-462752, c462669-462518, c461879-461693, c461597-461454, c461203-461006, c460652-460491, c460328-460195, c460046-459844, c459674-459503, c459079-458857, c458556-458389)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035149-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 708722 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c716792-716791, c716708-716618, c716304-716152, c715339-715259, c715159-715050, c713908-713860, c713741-713649, c713561-713497, c713407-713268, c713104-712778, c712077-711802, c711707-711661, c711572-711516, c711422-711349, c711258-711103, c710971-710323, c710187-710119, c709973-709824, c709723-709584, c708790-708722, c708055-707959, c707734-707631, c707262-707178, c707088-706987, c704068-703740, c703597-703471, c702566-702396)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035167-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 843768 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c845778-845654, c845523-845344, c845222-845123, c844434-844303, c843863-843768, c843645-843583, c843458-843330)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035181-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c1307702-1307624, c1306135-1306126, c1305578-1305484, c1304763-1304723)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035227-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c1325546-1325460, c1324831-1324821, c1324542-1324482, c1321106-1320996, c1320597-1320487, c1320191-1320020, c1317821-1317637, c1317314-1317162)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035229-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1694183 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:1687597-1687642, 1689401-1689529, 1689858-1690061, 1690462-1690622, 1690828-1690947, 1691128-1691263, 1691686-1691864, 1692164-1692271, 1692725-1693195, 1693581-1693685, 1694067-1694183, 1694381-1694479, 1695432-1695572, 1696010-1696199, 1697324-1697379, 1697678-1697776, 1697955-1698071, 1698671-1698772)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035254-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1694183 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:1689947-1690061, 1690462-1690622, 1690828-1690947, 1691128-1691263, 1691686-1691864, 1692164-1692271, 1692725-1693195, 1693581-1693685, 1694067-1694183, 1694381-1694479, 1695432-1695572, 1696010-1696199, 1697324-1697379, 1697678-1697776, 1697955-1698071, 1698671-1698772)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035254-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2277902 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:2273286-2273504, 2275277-2275495, 2277336-2277902, 2277958-2277996)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035294-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2277958 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:2273286-2273504, 2275277-2275495, 2277336-2277902, 2277958-2277996)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035294-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c2392580-2392564, c2392429-2392185, c2390599-2390387, c2390199-2389990, c2389700-2389446, c2388530-2388356, c2388266-2388241, c2388087-2387944, c2387789-2387658, c2387532-2387327, c2387217-2387073, c2386821-2386609, c2385904-2385682, c2385427-2385288, c2385175-2385050, c2384763-2384657, c2384504-2384258, c2384091-2383952, c2383343-2383190, c2383076-2383062, c2382895-2382825)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035307-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2997490 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c2998108-2998072, c2997897-2997792, c2997625-2997490, c2997220-2996975, c2996339-2996149, c2996019-2995798, c2995230-2995110, c2994435-2994340, c2993984-2993869, c2993616-2993451, c2993097-2992999, c2992829-2992570, c2992310-2992100)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035400-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3327923 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:3323696-3323704, 3323852-3324556, 3327793-3327923, 3328518-3328641, 3329091-3329270, 3329472-3329564, 3329707-3329883, 3330190-3330315, 3330812-3330925, 3331194-3331334)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035447-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4098006 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:4082449-4082478, 4082595-4082802, 4085657-4085925, 4086088-4086249, 4086335-4086448, 4086840-4087013, 4089889-4090086, 4090375-4090575, 4090981-4091133, 4091347-4091469, 4091643-4091780, 4092038-4092202, 4092343-4092523, 4093209-4093372, 4095041-4095166, 4095303-4095445, 4095597-4095831, 4095941-4096063, 4096252-4096397, 4096554-4096737, 4096977-4097169, 4097466-4097623, 4097734-4098006, 4098243-4098410, 4098530-4098679, 4098800-4098931, 4099063-4099173, 4099296-4099466, 4099634-4099855, 4102412-4102487, 4102648-4102787)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035525-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c4341966-4341873, c4341455-4341445, c4340661-4340548)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035556-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5153602 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c5153660-5153602, c5153423-5153186, c5153079-5152813)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035662-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5546610 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:5545683-5545768, 5546517-5546610, 5546835-5546927, 5547053-5547110, 5547206-5547257, 5547864-5548018, 5548183-5548273, 5548398-5548463, 5548555-5548681, 5548772-5548898, 5549069-5549113, 5549233-5549297, 5549412-5549479, 5549621-5549621)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035717-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5546835 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:5545683-5545768, 5546517-5546610, 5546835-5546927, 5547053-5547110, 5547206-5547257, 5547864-5548018, 5548183-5548273, 5548398-5548463, 5548555-5548681, 5548772-5548898, 5549069-5549113, 5549233-5549297, 5549412-5549479, 5549621-5549621)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035717-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5808973 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:5805282-5805308, 5806170-5806223, 5806664-5806736, 5807035-5807084, 5807189-5807244, 5807561-5807638, 5807854-5807931, 5808087-5808162, 5808280-5808393, 5808487-5808525, 5808854-5808973, 5809162-5809215, 5809319-5809405, 5809490-5809657)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035758-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c6469661-6469584, c6469398-6469336, c6469137-6469091, c6468405-6468347, c6468247-6468219, c6467805-6467598, c6467385-6467297, c6467129-6467063, c6466974-6466835, c6466562-6466537, c6466230-6466117, c6465675-6465577, c6465254-6465230, c6465088-6465076, c6464971-6464881, c6464748-6464696, c6464470-6464358, c6464029-6463955, c6463829-6463680, c6463435-6463310)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035837-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6805206 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:6799888-6799993, 6800087-6800248, 6800403-6800476, 6800633-6800822, 6800939-6801020, 6801144-6801399, 6801526-6801627, 6801725-6801838, 6801947-6802036, 6802161-6802303, 6802501-6802649, 6802778-6802888, 6803000-6803129, 6803682-6803832, 6804130-6804284, 6804490-6804682, 6804823-6804962, 6805089-6805206, 6805333-6805409, 6805495-6805630, 6805730-6805867, 6805958-6806125, 6806231-6806358, 6806528-6806735, 6806851-6806998, 6807108-6807250, 6807443-6807583, 6807708-6807903, 6808368-6808513, 6808611-6808703, 6808837-6808950, 6809109-6809233, 6809391-6809503, 6809663-6809740, 6809971-6810155, 6810333-6810568, 6810759-6810948)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035912-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6926802 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c6934133-6934082, c6933919-6933653, c6933217-6933054, c6932841-6932736, c6931226-6931134, c6930981-6930865, c6930291-6930136, c6929919-6929806, c6929679-6929611, c6929403-6929317, c6929159-6929031, c6928826-6928695, c6928586-6928458, c6928352-6928233, c6927379-6927257, c6926924-6926802, c6926642-6926523, c6926333-6926205, c6926047-6925877, c6925637-6925554, c6925179-6925051, c6924958-6924821, c6924624-6924484, c6924011-6923883, c6922927-6922760, c6922200-6922111, c6921893-6921762, c6921518-6921367)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035944-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6997409 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:6992122-6992163, 6992449-6992526, 6992773-6993391, 6993643-6993785, 6993924-6994019, 6994163-6994299, 6995006-6995089, 6995216-6995322, 6995417-6995568, 6995713-6995851, 6995979-6996052, 6996219-6996335, 6996426-6996548, 6996778-6996969, 6997087-6997188, 6997294-6997409, 6997526-6997653, 6997807-6997941, 6998037-6998125)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035952-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7001391 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c7007246-7007169, c7007082-7006971, c7006877-7006777, c7006670-7006603, c7006330-7006236, c7006129-7006065, c7005981-7005816, c7005693-7005488, c7004855-7004812, c7003793-7003689, c7003586-7003520, c7003398-7003226, c7003132-7002970, c7002868-7002789, c7002682-7002595, c7002490-7002362, c7002209-7002014, c7001924-7001841, c7001745-7001682, c7001541-7001391, c7001163-7001056, c7000679-7000465, c7000372-7000246)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_035955-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:7612032-7612152, 7613579-7613635, 7613807-7613920, 7614334-7614474, 7614622-7614824, 7615038-7615140, 7615549-7615656, 7615798-7615810, 7616049-7616106, 7616454-7616498)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036057-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8319589 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:8318966-8319070, 8319470-8319589, 8319777-8319864, 8319974-8320062, 8320180-8320235, 8320341-8320472, 8320707-8320750, 8321017-8321165)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036155-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8319777 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:8318966-8319070, 8319470-8319589, 8319777-8319864, 8319974-8320062, 8320180-8320235, 8320341-8320472, 8320707-8320750, 8321017-8321165)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036155-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c9018746-9018314, c9017686-9017616, c9017277-9017266, c9016281-9015907)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036255-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9191855 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c9196342-9196304, c9194545-9194483, c9193984-9193765, c9193562-9193376, c9193122-9193032, c9192724-9192587, c9192488-9192370, c9192104-9191855, c9190966-9190866, c9190712-9190602, c9188733-9188655, c9188522-9188361)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036292-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c9532258-9532210, c9531881-9531865, c9531239-9531084, c9530326-9530195, c9529662-9529491, c9526749-9526741, c9525834-9525710, c9525189-9525010)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036326-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:9764565-9764643, 9764787-9764882, 9765475-9765522, 9765970-9766155, 9766501-9766640, 9766742-9766849, 9767039-9767225, 9767378-9767547, 9768127-9768267, 9768514-9768640, 9768910-9769002, 9769086-9769229, 9769332-9769465, 9769852-9770039, 9770172-9770288, 9770604-9770790, 9770931-9771021, 9771156-9771269, 9771395-9771533, 9771675-9771852, 9772096-9772248, 9773415-9773663, 9773920-9774043, 9774441-9774688, 9775086-9775261, 9775560-9775789, 9775900-9776187, 9776432-9776589, 9776742-9776882, 9777129-9777142, 9777413-9777634, 9777829-9778070, 9778232-9778386, 9779308-9779321, 9779444-9779457, 9780091-9780251)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036341-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c10100725-10100607, c10100393-10100265, c10099975-10099829, c10099601-10099413, c10099029-10099017, c10097642-10097364, c10097175-10097077)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036386-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:10118896-10118911, 10119142->10120323)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036389-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10120323 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:10118896-10118911, 10119142->10120323)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036389-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10388741 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c10390722-10390508, c10390221-10390027, c10389844-10389726, c10388895-10388741, c10387901-10387761, c10387639-10387472, c10387291-10387151, c10386977-10386826, c10386650-10386310, c10386072-10386014)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036418-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11245413 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c11247924-11247859, c11247057-11246952, c11246393-11246153, c11245620-11245413, c11245309-11245142, c11244432-11244271, c11243843-11243693, c11243426-11243212, c11243127-11243010, c11242426-11242141, c11242027-11241898, c11241796-11241698, c11241606-11241538, c11241079-11240839, c11240680-11240615, c11239888-11239791, c11239615-11239148)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036504-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11261993 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:c11264839-11264686, c11264599-11264457, c11264347-11264155, c11264063-11263955, c11263547-11263447, c11263262-11263140, c11262975-11262880, c11262765-11262598, c11262384-11262236, c11262150-11261993, c11261905-11261858, c11261715-11261597, c11261520-11261269, c11261059-11260877, c11260445-11260309)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036507-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11303048 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:11302958-11303048, 11303183-11303260, 11303361-11303510, 11303656-11303754, 11303841-11303911, 11304110-11304240, 11304871-11305105)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036509-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11311250 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:11311163-11311250, 11312058-11312188, 11312566-11312683, 11312835-11312861, 11315508-11315579, 11315664-11315783, 11316030-11316089, 11316158-11316241, 11316644-11316801, 11316930-11317060, 11317144-11317234, 11318105-11318189, 11318302-11318378, 11318572-11318680, 11318875-11318982, 11319464-11319552, 11319940-11320080, 11320240-11320382, 11320776-11320900, 11321039-11321229, 11321435-11321506)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036511-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11388775 of lcl|scaffold_21 FEATURE: CDS: hypothetical protein [(lcl|scaffold_21:11384142-11384182, 11385751-11388775, 11390420-11390481, 11390640-11391398, 11391636-11392253, 11393085-11393151)] [lcl|scaffold_21: delta, dna len= 12129199] -> [gnl|ncbi|FUN_036517-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 266123 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:264079-264155, 264254-264334, 264494-264569, 265244-265409, 265504-265556, 265672-265794, 266016-266123, 266212-266329, 266526-266636, 266746-266912, 267289-267592)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 266123 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:264079-264155, 264254-264334, 264494-264569, 265244-265409, 265504-265556, 265672-265794, 266016-266123, 266212-266329, 266526-266636, 266840-266912, 267289-267592)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 330155 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c336172-336159, c335562-335542, c334696-334605, c331969-331871, c331767-331718, c331179-331122, c330998-330799, c330232-330155, c329325-329206, c329108-328989, c328611-328492, c328290-328207, c328035-327925, c327660-327562, c326818-326776, c326646-326541, c326344-326207, c325530-325498, c324475-324361, c324072-323967, c322927-322709, c322115-321965, c321278-321243, c321064-320898, c320809-320663, c320505-320420, c320332-320207, c319825-319711, c319524-319424, c319086-319009, c318791-318716, c317510-317343, c316384-316297, c316208-316131, c316030-315936, c315776-315498, c315310-315005, c314811-314582, c314194-314122, c313668-311597)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 455294 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c457785-457734, c457510-457414, c457264-457191, c457058-456931, c456286-456212, c456025-455932, c455721-455593, c455412-455294, c455194-455128, c455018-454958, c454808-454723, c454311-454219)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 464054 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c464200-464054, c463914-463779, c463677-463514, c463404-463157, c462953-462752, c462669-462518, c461879-461693, c461597-461454, c461203-461006, c460652-460491, c460328-460195, c460046-459844, c459674-459503, c459079-458857, c458556-458389)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 461693 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c464200-464054, c463914-463779, c463677-463514, c463404-463157, c462953-462752, c462669-462518, c461879-461693, c461597-461454, c461203-461006, c460652-460491, c460328-460195, c460046-459844, c459674-459503, c459079-458857, c458556-458389)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 708722 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c716836-716791, c716708-716618, c716304-716152, c715339-715259, c715159-715050, c713908-713860, c713741-713649, c713561-713497, c713407-713268, c713104-712778, c712077-711802, c711707-711661, c711572-711516, c711422-711349, c711258-711103, c710971-710323, c710187-710119, c709973-709824, c709723-709584, c708790-708722, c708055-707959, c707734-707631, c707262-707178, c707088-706987, c704068-703740, c703597-703471, c702566-702369)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 843768 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c846356-846287, c845793-845654, c845523-845344, c845222-845123, c844434-844303, c843863-843768, c843645-843583, c843458-842663)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1694183 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:1687549-1687642, 1689401-1689529, 1689858-1690061, 1690462-1690622, 1690828-1690947, 1691128-1691263, 1691686-1691864, 1692164-1692271, 1692725-1693195, 1693581-1693685, 1694067-1694183, 1694381-1694479, 1695432-1695572, 1696010-1696199, 1697324-1697379, 1697678-1697776, 1697955-1698071, 1698671-1701433)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1694183 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:1689745-1690061, 1690462-1690622, 1690828-1690947, 1691128-1691263, 1691686-1691864, 1692164-1692271, 1692725-1693195, 1693581-1693685, 1694067-1694183, 1694381-1694479, 1695432-1695572, 1696010-1696199, 1697324-1697379, 1697678-1697776, 1697955-1698071, 1698671-1701433)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2277902 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:2273285-2273504, 2275277-2275495, 2277336-2277902, 2277958-2278598)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2277958 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:2273285-2273504, 2275277-2275495, 2277336-2277902, 2277958-2278598)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2486907 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:2485796-2486005, 2486821-2486907, 2487104-2487207, 2487317-2487410, 2487650-2487753, 2488085-2488205, 2488341-2488526, 2488687-2489081)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2997490 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c2998818-2998679, c2998127-2998072, c2997897-2997792, c2997625-2997490, c2997220-2996975, c2996339-2996149, c2996019-2995798, c2995230-2995110, c2994435-2994340, c2993984-2993869, c2993616-2993451, c2993097-2992999, c2992829-2992570, c2992310-2992100)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3327923 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:3323696-3323704, 3323852-3324556, 3327793-3327923, 3328518-3328641, 3329091-3329270, 3329472-3329564, 3329707-3329883, 3330190-3330315, 3330812-3330925, 3331194-3332827)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4098006 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:4082449-4082478, 4082595-4082802, 4085657-4085925, 4086088-4086249, 4086335-4086448, 4086840-4087013, 4089889-4090086, 4090375-4090575, 4090981-4091133, 4091347-4091469, 4091643-4091780, 4092038-4092202, 4092343-4092523, 4093209-4093372, 4095041-4095166, 4095303-4095445, 4095597-4095831, 4095941-4096063, 4096252-4096397, 4096554-4096737, 4096977-4097169, 4097466-4097623, 4097734-4098006, 4098243-4098410, 4098530-4098679, 4098800-4098931, 4099063-4099173, 4099296-4099466, 4099634-4099855, 4102412-4102487, 4102648-4104056)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4271526 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:4256028-4256320, 4256478-4256616, 4256729-4256831, 4256970-4257083, 4258265-4258395, 4258483-4258653, 4258865-4259085, 4259543-4259614, 4260605-4260719, 4262341-4262409, 4262516-4262650, 4262848-4263024, 4263871-4263979, 4265334-4265438, 4265690-4265854, 4267832-4268033, 4268766-4268891, 4269058-4269259, 4269513-4269761, 4270397-4270504, 4270767-4270872, 4271037-4271213, 4271317-4271526, 4271595-4271695)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4271595 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:4256028-4256320, 4256478-4256616, 4256729-4256831, 4256970-4257083, 4258265-4258395, 4258483-4258653, 4258865-4259085, 4259543-4259614, 4260605-4260719, 4262341-4262409, 4262516-4262650, 4262848-4263024, 4263871-4263979, 4265334-4265438, 4265690-4265854, 4267832-4268033, 4268766-4268891, 4269058-4269259, 4269513-4269761, 4270397-4270504, 4270767-4270872, 4271037-4271213, 4271317-4271526, 4271595-4271695)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5153602 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c5153814-5153602, c5153423-5153186, c5153079-5152244)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5546610 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:5545510-5545768, 5546517-5546610, 5546835-5546927, 5547053-5547110, 5547206-5547257, 5547864-5548018, 5548183-5548273, 5548398-5548463, 5548555-5548681, 5548772-5548898, 5549069-5549113, 5549233-5549297, 5549412-5549479, 5549621-5550016)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5546835 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:5545510-5545768, 5546517-5546610, 5546835-5546927, 5547053-5547110, 5547206-5547257, 5547864-5548018, 5548183-5548273, 5548398-5548463, 5548555-5548681, 5548772-5548898, 5549069-5549113, 5549233-5549297, 5549412-5549479, 5549621-5550016)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5808973 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:5805131-5805308, 5806170-5806223, 5806664-5806736, 5807035-5807084, 5807189-5807244, 5807561-5807638, 5807854-5807931, 5808087-5808162, 5808280-5808393, 5808487-5808525, 5808854-5808973, 5809162-5809215, 5809319-5809405, 5809490-5809997)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5979220 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c5980692-5980364, c5980258-5980118, c5979998-5979812, c5979441-5979220, c5979197-5979053)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6805206 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:6799011-6799107, 6799878-6799993, 6800087-6800248, 6800403-6800476, 6800633-6800822, 6800939-6801020, 6801144-6801399, 6801526-6801627, 6801725-6801838, 6801947-6802036, 6802161-6802303, 6802501-6802649, 6802778-6802888, 6803000-6803129, 6803682-6803832, 6804130-6804284, 6804490-6804682, 6804823-6804962, 6805089-6805206, 6805333-6805409, 6805495-6805630, 6805730-6805867, 6805958-6806125, 6806231-6806358, 6806528-6806735, 6806851-6806998, 6807108-6807250, 6807443-6807583, 6807708-6807903, 6808368-6808513, 6808611-6808703, 6808837-6808950, 6809109-6809233, 6809391-6809503, 6809663-6809740, 6809971-6810155, 6810333-6810568, 6810759-6812699)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6926802 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c6934133-6934082, c6933919-6933653, c6933217-6933054, c6932841-6932736, c6931226-6931134, c6930981-6930865, c6930291-6930136, c6929919-6929806, c6929679-6929611, c6929403-6929317, c6929159-6929031, c6928826-6928695, c6928586-6928458, c6928352-6928233, c6927379-6927257, c6926924-6926802, c6926642-6926523, c6926333-6926205, c6926047-6925877, c6925637-6925554, c6925179-6925051, c6924958-6924821, c6924624-6924484, c6924011-6923883, c6922927-6922760, c6922200-6922111, c6921893-6921762, c6921518-6920250)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6997409 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:6992122-6992163, 6992449-6992526, 6992773-6993391, 6993643-6993785, 6993924-6994019, 6994163-6994299, 6995006-6995089, 6995216-6995322, 6995417-6995568, 6995713-6995851, 6995979-6996052, 6996219-6996335, 6996426-6996548, 6996778-6996969, 6997087-6997188, 6997294-6997409, 6997526-6997653, 6997807-6997941, 6998037-6998469)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7001391 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c7007839-7007779, c7007253-7007169, c7007082-7006971, c7006877-7006777, c7006670-7006603, c7006330-7006236, c7006129-7006065, c7005981-7005816, c7005693-7005488, c7004855-7004812, c7003793-7003689, c7003586-7003520, c7003398-7003226, c7003132-7002970, c7002868-7002789, c7002682-7002595, c7002490-7002362, c7002209-7002014, c7001924-7001841, c7001745-7001682, c7001541-7001391, c7001163-7001056, c7000679-7000465, c7000372-6999821)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8319589 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:8318875-8319070, 8319470-8319589, 8319777-8319864, 8319974-8320062, 8320180-8320235, 8320341-8320472, 8320707-8320750, 8321017-8321998)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8319777 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:8318875-8319070, 8319470-8319589, 8319777-8319864, 8319974-8320062, 8320180-8320235, 8320341-8320472, 8320707-8320750, 8321017-8321998)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9191855 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c9196399-9196304, c9194545-9194483, c9193984-9193765, c9193562-9193376, c9193122-9193032, c9192724-9192587, c9192488-9192370, c9192104-9191855, c9190966-9190866, c9190712-9190602, c9188733-9188655, c9188522-9188358, c9188222-9188195)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10120323 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:10118780-10118911, 10119142->10120323)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10388741 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c10390722-10390508, c10390221-10390027, c10389844-10389726, c10388895-10388741, c10387901-10387761, c10387639-10387472, c10387291-10387151, c10386977-10386826, c10386650-10386310, c10386072-10386014)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10987236 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:10975573-10975588, 10976030-10976101, 10976900-10976981, 10979225-10979288, 10979420-10980699, 10981449-10981622, 10982449-10982608, 10982909-10983107, 10983636-10983846, 10984100-10984214, 10984521-10984742, 10985418-10985635, 10985925-10986101, 10986280-10987236, 10987280-10988018)] [lcl|scaffold_21: delta, dna len= 12129199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10987280 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:10975573-10975588, 10976030-10976101, 10976900-10976981, 10979225-10979288, 10979420-10980699, 10981449-10981622, 10982449-10982608, 10982909-10983107, 10983636-10983846, 10984100-10984214, 10984521-10984742, 10985418-10985635, 10985925-10986101, 10986280-10987236, 10987280-10988018)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11248116 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c11249678-11249594, c11248226-11248116, c11247977-11247859, c11247057-11246952, c11246393-11246153, c11245620-11245413, c11245309-11245142, c11244432-11244271, c11243843-11243693, c11243426-11243212, c11243127-11243010, c11242426-11242141, c11242027-11241898, c11241796-11241698, c11241606-11241538, c11241079-11240839, c11240680-11240615, c11239888-11239791, c11239615-11236742)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11245413 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c11249678-11249594, c11248226-11248116, c11247977-11247859, c11247057-11246952, c11246393-11246153, c11245620-11245413, c11245309-11245142, c11244432-11244271, c11243843-11243693, c11243426-11243212, c11243127-11243010, c11242426-11242141, c11242027-11241898, c11241796-11241698, c11241606-11241538, c11241079-11240839, c11240680-11240615, c11239888-11239791, c11239615-11236742)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11261993 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:c11264839-11264686, c11264599-11264457, c11264347-11264155, c11264063-11263955, c11263547-11263447, c11263262-11263140, c11262975-11262880, c11262765-11262598, c11262384-11262236, c11262150-11261993, c11261905-11261858, c11261715-11261597, c11261520-11261269, c11261059-11260877, c11260445-11260233)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11303048 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:11302875-11303048, 11303183-11303260, 11303361-11303510, 11303656-11303754, 11303841-11303911, 11304110-11304240, 11304871-11305205)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11311250 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:11311028-11311250, 11312058-11312188, 11312566-11312683, 11312835-11312861, 11315508-11315579, 11315664-11315783, 11316030-11316089, 11316158-11316241, 11316644-11316801, 11316930-11317060, 11317144-11317234, 11318105-11318189, 11318302-11318378, 11318572-11318680, 11318875-11318982, 11319464-11319552, 11319940-11320080, 11320240-11320382, 11320776-11320900, 11321039-11321229, 11321435-11321935)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11388775 of lcl|scaffold_21 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_21:11384142-11384182, 11385751-11388775, 11390420-11390481, 11390640-11391398, 11391636-11392253, 11393085-11393151)] [lcl|scaffold_21: delta, dna len= 12129199]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 44542 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c46757-46702, c45579-45502, c45246-45210, c45062-44976, c44592-44542, c44454-44400, c41964-41859, c41779-41689, c41222-41135, c40865-40758, c38038-37975, c37553-37450, c37365-37266, c35464-35425, c35101-34976)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041045-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 44542 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c46757-46702, c45579-45502, c45246-45210, c45062-44976, c44592-44542, c44454-44400, c41964-41859, c41779-41689, c41222-41135, c40865-40758, c38038-37975, c37553-37415)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041045-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c302420-302418, c301924-301841, c301689-301679, c301657-301549, c301442-301429, c301293-301067, c300527-300295, c300003-299809, c299490-299332, c298846-298689, c298599-298494, c298109-297939, c296602-296510, c295148-294921)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041072-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:811894-811995, 813726-813810, 814613-814643, 815384-815430, 815504-815575, 815790-815847, 815955-816117, 817742-817817, 818096-818196, 818548-818689, 820902-821062, 821749-821761, 822045-822190)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041115-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1327003 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c1331657-1331626, c1330869-1330635, c1330265-1330156, c1329958-1329856, c1329639-1329473, c1329128-1328918, c1328563-1328489, c1328388-1328278, c1328028-1327845, c1327184-1327003, c1326525-1326395, c1326001-1325896, c1325807-1325710, c1325563-1325457, c1325298-1325252, c1324625-1324526, c1324421-1324325, c1323350-1323293)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041140-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:<1387389-1387554, 1388205-1388356, 1388682-1388762, 1390926-1391026, 1391322-1391454, 1392112-1392194, 1392356-1392488, 1392941-1393084, 1393237-1393323, 1393692-1393912, 1394644-1394746, 1395167-1395265, 1395425-1395571, 1396504-1396638, 1397200-1397253, 1397582-1397690, 1397920-1398050, 1398400-1398540, 1398691-1398784, 1398955-1399109, 1399374-1399470, 1399788-1399969)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041146-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1387389 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:<1387389-1387554, 1388205-1388356, 1388682-1388762, 1390926-1391026, 1391322-1391454, 1392112-1392194, 1392356-1392488, 1392941-1393084, 1393237-1393323, 1393692-1393912, 1394644-1394746, 1395167-1395265, 1395425-1395571, 1396504-1396638, 1397200-1397253, 1397582-1397690, 1397920-1398050, 1398400-1398540, 1398691-1398784, 1398955-1399109, 1399374-1399470, 1399788-1399969)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041146-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c2936685-2936563, c2936116-2936110, c2934967-2934828, c2934323-2934208, c2932895-2932721, c2932448-2932312, c2931834-2931660, c2931445-2931419)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041246-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2956355 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c2964963-2964906, c2964641-2964544, c2963942-2963886, c2962975-2962932, c2960899-2960827, c2960711-2960598, c2960056-2959928, c2959585-2959257, c2958926-2958870, c2958231-2958189, c2957235-2957220, c2957047-2957015, c2956836-2956769, c2956524-2956355, c2954979-2954949)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041250-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3351597 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c3354343-3354285, c3353978-3353301, c3353207-3353045, c3352726-3352629, c3352409-3352197, c3352063-3351976, c3351718-3351597, c3351236-3351131, c3350464-3350393, c3350132-3350023, c3349917-3347878, c3347405-3347312, c3346773-3346648)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041288-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3351597 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c3354343-3354285, c3353978-3353301, c3353207-3353045, c3352726-3352629, c3352409-3352197, c3352063-3351976, c3351718-3351597, c3351236-3351131, c3350464-3350393, c3350132-3350023, c3349917-3349263, c3348914-3347878, c3347405-3347246)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041288-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3536126 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:3530202-3530229, 3530476-3530618, 3530749-3530927, 3531494-3531650, 3531819-3532234, 3532646-3532700, 3532861-3533047, 3533357-3533879, 3533942-3534006, 3534341-3534375, 3535258-3535349, 3535544-3535625, 3535852-3535927, 3536042-3536126, 3536359-3536451, 3536577-3536762, 3538127-3538211, 3538489-3538583, 3538672-3538750, 3538856-3538957, 3539122-3539225, 3539846-3539891)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041308-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3536359 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:3530202-3530229, 3530476-3530618, 3530749-3530927, 3531494-3531650, 3531819-3532234, 3532646-3532700, 3532861-3533047, 3533357-3533879, 3533942-3534006, 3534341-3534375, 3535258-3535349, 3535544-3535625, 3535852-3535927, 3536042-3536126, 3536359-3536451, 3536577-3536762, 3538127-3538211, 3538489-3538583, 3538672-3538750, 3538856-3538957, 3539122-3539225, 3539846-3539891)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041308-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3562732 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:3558582-3558753, 3558959-3559096, 3559645-3559799, 3560373-3560534, 3560711-3560896, 3561047-3561316, 3561644-3561769, 3561984-3562169, 3562675-3562732, 3562933-3563036, 3563145-3563206, 3563306-3563396)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041314-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:3677319-3677648, 3680173-3680292, 3680879-3681055, 3681921-3682023, 3683403-3683447, 3684381-3684431, 3686726-3686841, 3687102-3687256, 3687586-3687732, 3688011-3688101, 3688392-3688571, 3688903-3689031, 3689300-3689313, 3689577-3689910, 3690368-3690470, 3690912-3691040, 3691469-3691623)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041331-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:3738697-3738723, 3738838-3738877, 3739261-3739377, 3739480-3739647, 3739833-3739937, 3740229-3740359, 3740547-3740654, 3740771-3740878, 3740962-3740968, 3741009-3741146, 3741834-3741913)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041337-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3809250 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:3808669-3808683, 3808994-3809043, 3809141-3809250, 3809387-3809451, 3809552-3809703, 3809808-3809862, 3809945-3810019, 3810118-3810240, 3810349-3810414, 3810515-3810727)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041351-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4123315 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:4117761-4117812, 4120551-4120684, 4121149-4121261, 4121523-4121628, 4121731-4121817, 4121933-4122063, 4122181-4122275, 4122427-4122472, 4122877-4122928, 4123011-4123083, 4123218-4123315, 4123453-4123564, 4123603-4123745, 4124837-4124866)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041394-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4541815 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:4541458-4541815, 4541847-4542052)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041451-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4602387 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c4604799-4604792, c4604491-4603941, c4603761-4603647, c4603539-4603409, c4603325-4603120, c4602949-4602741, c4602528-4602387, c4602204-4602016, c4601804-4601631, c4601419-4601260, c4600938-4600802, c4600443-4600129)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041456-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5363948 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5362600-5362680, 5362772-5362861, 5362975-5363078, 5363162-5363239, 5363786-5363948, 5364055-5364126, 5364222-5364344, 5364483-5364599, 5364735-5364845)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041544-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5562154 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5556534-5556569, 5556677-5556755, 5557732-5557943, 5558038-5558123, 5558714-5558847, 5558963-5559131, 5559228-5559348, 5559506-5560801, 5561322-5561588, 5561756-5562154, 5562325-5562486, 5562610-5562783, 5562895-5562976, 5563096-5563244, 5563357-5563623)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041579-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5746448 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5744767-5744769, 5745760-5745849, 5745956-5746031, 5746344-5746448, 5746584-5746666)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041608-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5746448 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5744767-5744769, 5745956-5746031, 5746344-5746448, 5746584-5746662, 5746966-5747014, 5747252-5747356)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041608-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5773136 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5770984-5771084, 5771401-5771587, 5771667-5771786, 5771916-5772027, 5772127-5772280, 5772441-5772583, 5772666-5772783, 5772940-5773136, 5773244-5773468, 5773553-5773703, 5773811-5774000)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041616-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5932873 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c5935300-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041643-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5931844 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c5935300-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041643-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5932873 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c5936361-5936233, c5936121-5935996, c5935858-5935717, c5935266-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041643-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5931844 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c5936361-5936233, c5936121-5935996, c5935858-5935717, c5935266-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041643-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5977078-5977140, 5977653-5977794, 5978724-5978852, 5980679-5980812, 5981162-5981254, 5982278-5982340, 5982854-5982877, 5982991-5983080, 5983172-5983272, 5983388-5983402, 5983513-5983726, 5983982-5984089)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041654-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:5980657-5980812, 5981162-5981254, 5982278-5982340, 5982854-5982877, 5982991-5983080, 5983172-5983272, 5983388-5983402, 5983513-5983726, 5983982-5984089)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041654-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6571928 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:6568852-6568875, 6570306-6570410, 6570545-6570707, 6571379-6571566, 6571773-6571928, 6572714-6572827, 6572955-6573062, 6573180-6573291, 6573407-6574446)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041749-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7907352 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c7914229-7914093, c7913743-7913591, c7911927-7911792, c7911430-7911360, c7910823-7910706, c7910325-7910294, c7910110-7910058, c7909913-7909763, c7909642-7909564, c7909470-7909347, c7909214-7909058, c7908965-7908878, c7908689-7908609, c7908516-7908359, c7908271-7908195, c7908044-7907872, c7907769-7907610, c7907494-7907352, c7907189-7907063, c7906966-7906959)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041902-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:7942155-7942176, 7943014-7943113, 7944088-7944097, 7944436-7944568, 7944719-7944729)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041906-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8179536 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:8177098-8177440, 8179234-8179536, 8179852-8180141)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041921-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8384680 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c8384801-8384680, c8384493-8384369, c8384156-8383993, c8383512-8383422, c8383258-8383091, c8382918-8382770, c8382626-8382456, c8382294-8382211, c8382058-8381987, c8381859-8381790, c8381590-8381382, c8381190-8381047, c8380879-8380716, c8380441-8380217, c8379995-8379855, c8379288-8379204, c8378726-8378494, c8377892-8377760, c8376947-8376845, c8376657-8376516, c8375662-8375575, c8375531-8375277, c8375137-8374977, c8374714-8374571, c8373658-8373550, c8373305-8373192)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_041942-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9039928 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c9041093-9041049, c9040902-9040818, c9040254-9040205, c9040038-9039928, c9039680-9039612, c9039444-9039363, c9039243-9039172, c9039081-9038881, c9038320-9038189, c9038007-9037918, c9037558-9037417, c9036979-9036899, c9036541-9036283)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042015-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:c9278547-9278527, c9276767-9276651, c9275849-9275708, c9275121-9275108, c9274789-9274676, c9272676-9272561, c9271303-9271227, c9270268-9270222)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042032-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:9314947-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316595, 9316755-9316850)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042036-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:9314112-9314112, 9314737-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316613)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042036-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:9312291-9312441, 9314737-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316595, 9316755-9316850)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042036-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:9312426-9312441, 9314737-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316595, 9316755-9316850)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042036-T4]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9517735 of lcl|scaffold_26 FEATURE: CDS: hypothetical protein [(lcl|scaffold_26:9514517-9514619, 9514926-9515012, 9515129-9515225, 9515550-9515641, 9517387-9517446, 9517698-9517735, 9518844-9518890, 9519808-9519894, 9520072-9520116, 9520766-9520822, 9521377-9521428, 9522965-9523033, 9523277-9523342, 9523488-9523614, 9523908-9523978)] [lcl|scaffold_26: delta, dna len= 10171244] -> [gnl|ncbi|FUN_042053-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 44542 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c47071-47040, c46788-46702, c45579-45502, c45246-45210, c45062-44976, c44592-44542, c44454-44400, c41964-41859, c41779-41689, c41222-41135, c40865-40758, c38038-37975, c37553-37450, c37365-37266, c35464-35425, c35101-34766)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 44542 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c47071-47040, c46788-46702, c45579-45502, c45246-45210, c45062-44976, c44592-44542, c44454-44400, c41964-41859, c41779-41689, c41222-41135, c40865-40758, c38038-37975, c37553-37410)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 435789 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:433272-433338, 434425-434521, 434646-434693, 435029-435136, 435541-435789, 437414-437479)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1327003 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c1331657-1331626, c1330869-1330635, c1330265-1330156, c1329958-1329856, c1329639-1329473, c1329128-1328918, c1328563-1328489, c1328388-1328278, c1328028-1327845, c1327184-1327003, c1326525-1326395, c1326001-1325896, c1325807-1325710, c1325563-1325457, c1325298-1325252, c1324625-1324526, c1324421-1324325, c1323350-1323293)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:<1387387-1387554, 1388205-1388356, 1388682-1388762, 1390926-1391026, 1391322-1391454, 1392112-1392194, 1392356-1392488, 1392941-1393084, 1393237-1393323, 1393692-1393912, 1394644-1394746, 1395167-1395265, 1395425-1395571, 1396504-1396638, 1397200-1397253, 1397582-1397690, 1397920-1398050, 1398400-1398540, 1398691-1398784, 1398955-1399109, 1399374-1399470, 1399788-1400006)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2956355 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c2966294-2966249, c2965228-2965159, c2965056-2964906, c2964641-2964544, c2963942-2963886, c2962975-2962932, c2960899-2960827, c2960711-2960598, c2960056-2959928, c2959585-2959257, c2958926-2958870, c2958231-2958189, c2957235-2957220, c2957047-2957015, c2956836-2956769, c2956524-2956355, c2954979-2954123)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3351597 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c3354626-3354285, c3353978-3353301, c3353207-3353045, c3352726-3352629, c3352409-3352197, c3352063-3351976, c3351718-3351597, c3351236-3351131, c3350464-3350393, c3350132-3350023, c3349917-3347878, c3347405-3347312, c3346773-3346480)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3351597 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c3354343-3354285, c3353978-3353301, c3353207-3353045, c3352726-3352629, c3352409-3352197, c3352063-3351976, c3351718-3351597, c3351236-3351131, c3350464-3350393, c3350132-3350023, c3349917-3349263, c3348914-3347878, c3347405-3347150)] [lcl|scaffold_26: delta, dna len= 10171244]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3536126 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:3530202-3530229, 3530476-3530618, 3530749-3530927, 3531494-3531650, 3531819-3532234, 3532646-3532700, 3532861-3533047, 3533357-3533879, 3533942-3534006, 3534341-3534375, 3535258-3535349, 3535544-3535625, 3535852-3535927, 3536042-3536126, 3536359-3536451, 3536577-3536762, 3538127-3538211, 3538489-3538583, 3538672-3538750, 3538856-3538957, 3539122-3539225, 3539846-3539891)] [lcl|scaffold_26: delta, dna len= 10171244]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3536359 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:3530202-3530229, 3530476-3530618, 3530749-3530927, 3531494-3531650, 3531819-3532234, 3532646-3532700, 3532861-3533047, 3533357-3533879, 3533942-3534006, 3534341-3534375, 3535258-3535349, 3535544-3535625, 3535852-3535927, 3536042-3536126, 3536359-3536451, 3536577-3536762, 3538127-3538211, 3538489-3538583, 3538672-3538750, 3538856-3538957, 3539122-3539225, 3539846-3539891)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3562732 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:3558216-3558281, 3558493-3558753, 3558959-3559096, 3559645-3559799, 3560373-3560534, 3560711-3560896, 3561047-3561316, 3561644-3561769, 3561984-3562169, 3562675-3562732, 3562933-3563036, 3563145-3563206, 3563306-3563493)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3809250 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:3808511-3808683, 3808994-3809043, 3809141-3809250, 3809387-3809451, 3809552-3809703, 3809808-3809862, 3809945-3810019, 3810118-3810240, 3810349-3810414, 3810515-3810938)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4123315 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:4117369-4117812, 4120551-4120684, 4121149-4121261, 4121523-4121628, 4121731-4121817, 4121933-4122063, 4122181-4122275, 4122427-4122472, 4122877-4122928, 4123011-4123083, 4123218-4123315, 4123453-4123564, 4123603-4123745, 4124837-4124866)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4541815 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:4541187-4541815, 4541847-4542779)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4602387 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c4604799-4604792, c4604491-4603941, c4603761-4603647, c4603539-4603409, c4603325-4603120, c4602949-4602741, c4602528-4602387, c4602204-4602016, c4601804-4601631, c4601419-4601260, c4600938-4600802, c4600443-4599568)] [lcl|scaffold_26: delta, dna len= 10171244]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:<5029006-5029094, 5029520-5029673, 5030494-5030560, 5030699-5030765, 5030951-5031042, 5031167-5031293, 5031417-5031458, 5031544-5031636, 5032011-5033473)] [lcl|scaffold_26: delta, dna len= 10171244]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5029006 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:<5029006-5029094, 5029520-5029673, 5030494-5030560, 5030699-5030765, 5030951-5031042, 5031167-5031293, 5031417-5031458, 5031544-5031636, 5032011-5033473)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5363948 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:5362595-5362680, 5362772-5362861, 5362975-5363078, 5363162-5363239, 5363786-5363948, 5364055-5364126, 5364222-5364344, 5364483-5364599, 5364735-5364990)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5562154 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:5556534-5556569, 5556677-5556755, 5557732-5557943, 5558038-5558123, 5558714-5558847, 5558963-5559131, 5559228-5559348, 5559506-5560801, 5561322-5561588, 5561756-5562154, 5562325-5562486, 5562610-5562783, 5562895-5562976, 5563096-5563244, 5563357-5565314)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5746448 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:5744722-5744769, 5745760-5745849, 5745956-5746031, 5746344-5746448, 5746584-5746696)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5746448 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:5744722-5744769, 5745956-5746031, 5746344-5746448, 5746584-5746662, 5746966-5747014, 5747252-5747533)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5773136 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:5770847-5771084, 5771401-5771587, 5771667-5771786, 5771916-5772027, 5772127-5772280, 5772441-5772583, 5772666-5772783, 5772940-5773136, 5773244-5773468, 5773553-5773703, 5773811-5774681)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5932873 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c5935340-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5931844 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c5935340-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5932873 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c5936393-5936233, c5936121-5935996, c5935858-5935717, c5935266-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5931844 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c5936393-5936233, c5936121-5935996, c5935858-5935717, c5935266-5935214, c5934971-5934720, c5934614-5934459, c5934325-5934177, c5934022-5933962, c5933862-5933608, c5933490-5933265, c5933154-5933042, c5932942-5932873, c5932780-5932638, c5932501-5932311, c5932195-5932066, c5931948-5931844, c5931730-5931648, c5931541-5931478, c5931384-5931316)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6571928 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:6566760-6566887, 6568760-6568875, 6570306-6570410, 6570545-6570707, 6571379-6571566, 6571773-6571928, 6572714-6572827, 6572955-6573062, 6573180-6573291, 6573407-6575585)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7907352 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c7914229-7914093, c7913743-7913591, c7911927-7911792, c7911430-7911360, c7910823-7910706, c7910325-7910294, c7910110-7910058, c7909913-7909763, c7909642-7909564, c7909470-7909347, c7909214-7909058, c7908965-7908878, c7908689-7908609, c7908516-7908359, c7908271-7908195, c7908044-7907872, c7907769-7907610, c7907494-7907352, c7907189-7907063, c7906966-7906959)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8179536 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:8177087-8177440, 8179234-8179536, 8179852-8182296)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8384680 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c8384885-8384680, c8384493-8384369, c8384156-8383993, c8383512-8383422, c8383258-8383091, c8382918-8382770, c8382626-8382456, c8382294-8382211, c8382058-8381987, c8381859-8381790, c8381590-8381382, c8381190-8381047, c8380879-8380716, c8380441-8380217, c8379995-8379855, c8379288-8379204, c8378726-8378494, c8377892-8377760, c8376947-8376845, c8376657-8376516, c8375662-8375575, c8375531-8375277, c8375137-8374977, c8374714-8374571, c8373658-8373550, c8373305-8373192)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9039928 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c9041093-9041049, c9040902-9040818, c9040254-9040205, c9040038-9039928, c9039680-9039612, c9039444-9039363, c9039243-9039172, c9039081-9038881, c9038320-9038189, c9038007-9037918, c9037558-9037417, c9036979-9036899, c9036541-9036176)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:9314684-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316595, 9316755-9316966)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:9313971-9314112, 9314737-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316966)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:9312201-9312441, 9314737-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316595, 9316755-9318040)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9316077 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:9311532-9311565, 9312389-9312441, 9314737-9314783, 9314932-9315007, 9315203-9315310, 9315415-9315482, 9315627-9315671, 9315827-9315861, 9315996-9316077, 9316181-9316246, 9316446-9316595, 9316755-9316966)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9517735 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:9514061-9514148, 9514515-9514619, 9514926-9515012, 9515129-9515225, 9515550-9515641, 9517387-9517446, 9517698-9517735, 9518844-9518890, 9519808-9519894, 9520072-9520116, 9520766-9520822, 9521377-9521428, 9522965-9523033, 9523277-9523342, 9523488-9523614, 9523908-9524607)] [lcl|scaffold_26: delta, dna len= 10171244]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10119686 of lcl|scaffold_26 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_26:c10123978-10123445, c10123146-10122926, c10122508-10122332, c10122181-10122047, c10121910-10121765, c10121649-10121517, c10120347-10120171, c10119900-10119686, c10119489-10119414, c10119225-10119133)] [lcl|scaffold_26: delta, dna len= 10171244]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_31:1363-1658, 1868-1878, 1958-2646)] [lcl|scaffold_31: delta, dna len= 50970] -> [gnl|ncbi|FUN_044327-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_41:<2559-2634, 3239-3341, 3783-3876, 4987-5098, 6220-6326, 6425-6466, 6635-6709, 7718-7791, 10107-10119, 10217-10311, 12397-12473, 13203-13346, 15965-16057, 16782-16963)] [lcl|scaffold_41: delta, dna len= 32582] -> [gnl|ncbi|FUN_044390-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_66:5868-5879, 6771-6779, 7132-7359)] [lcl|scaffold_66: raw, dna len= 25000] -> [gnl|ncbi|FUN_044532-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_126:<246-354, 1414-1431, 2188-2214, 2305-2484, 3318-3452, 5590-5741)] [lcl|scaffold_126: delta, dna len= 14179] -> [gnl|ncbi|FUN_044673-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 246 of lcl|scaffold_126 FEATURE: CDS: hypothetical protein [(lcl|scaffold_126:<246-354, 1414-1431, 2188-2214, 2305-2484, 3318-3452, 5590-5741)] [lcl|scaffold_126: delta, dna len= 14179] -> [gnl|ncbi|FUN_044673-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_126:<245-354, 1414-1431, 2188-2214, 2305-2484, 3318-3452, 5590-6498)] [lcl|scaffold_126: delta, dna len= 14179]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 245 of lcl|scaffold_126 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_126:<245-354, 1414-1431, 2188-2214, 2305-2484, 3318-3452, 5590-6498)] [lcl|scaffold_126: delta, dna len= 14179]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_136:c>10851-10689, c10249-10063, c7972-7828, c7145-6982, c4569-4550, c4147-4027, c3547-3352)] [lcl|scaffold_136: raw, dna len= 13200] -> [gnl|ncbi|FUN_044689-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10851 of lcl|scaffold_136 FEATURE: CDS: hypothetical protein [(lcl|scaffold_136:c>10851-10689, c10249-10063, c7972-7828, c7145-6982, c4569-4550, c4147-4027, c3547-3352)] [lcl|scaffold_136: raw, dna len= 13200] -> [gnl|ncbi|FUN_044689-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_136:c>10852-10689, c10249-10063, c7972-7828, c7145-6982, c4569-4550, c4147-4027, c3547-2620)] [lcl|scaffold_136: raw, dna len= 13200]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_161:<2798-2910, 3148-3159, 3852-4019, 9000-9021)] [lcl|scaffold_161: delta, dna len= 11782] -> [gnl|ncbi|FUN_044729-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_161:c>10679-<10439] [lcl|scaffold_161: delta, dna len= 11782] -> [gnl|ncbi|FUN_044730-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_316:c>8079-7844, c7451-7354, c6976-6871, c5620-5578, c5353-5263, c4676-4671, c3780-3695, c3531-3459, c595-<498)] [lcl|scaffold_316: delta, dna len= 8251] -> [gnl|ncbi|FUN_044913-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_316:c>8079-7844, c7451-7354, c6976-6871, c5620-5578, c5353-5263, c4676-4671, c3780-3695, c3531-3459, c595-<498)] [lcl|scaffold_316: delta, dna len= 8251] -> [gnl|ncbi|FUN_044913-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8079 of lcl|scaffold_316 FEATURE: CDS: hypothetical protein [(lcl|scaffold_316:c>8079-7844, c7451-7354, c6976-6871, c5620-5578, c5353-5263, c4676-4671, c3780-3695, c3531-3459, c595-<498)] [lcl|scaffold_316: delta, dna len= 8251] -> [gnl|ncbi|FUN_044913-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_316:c>8081-7844, c7451-7354, c6976-6871, c5620-5578, c5353-5263, c4676-4671, c3780-3695, c3531-3459, c595-<498)] [lcl|scaffold_316: delta, dna len= 8251]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8081 of lcl|scaffold_316 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_316:c>8081-7844, c7451-7354, c6976-6871, c5620-5578, c5353-5263, c4676-4671, c3780-3695, c3531-3459, c595-<498)] [lcl|scaffold_316: delta, dna len= 8251]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3581 of lcl|scaffold_476 FEATURE: CDS: hypothetical protein [(lcl|scaffold_476:c>6186-6137, c4885-4689, c4333-4237, c4148-4033, c3783-3581, c3167-3003, c2773-2640, c2127-1997, c1066-<926)] [lcl|scaffold_476: raw, dna len= 6655] -> [gnl|ncbi|FUN_045058-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 926 of lcl|scaffold_476 FEATURE: CDS: hypothetical protein [(lcl|scaffold_476:c>6186-6137, c4885-4689, c4333-4237, c4148-4033, c3783-3581, c3167-3003, c2773-2640, c2127-1997, c1066-<926)] [lcl|scaffold_476: raw, dna len= 6655] -> [gnl|ncbi|FUN_045058-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3581 of lcl|scaffold_476 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_476:c>6186-6137, c4885-4689, c4333-4237, c4148-4033, c3783-3581, c3167-3003, c2773-2640, c2127-1997, c1066-<926)] [lcl|scaffold_476: raw, dna len= 6655]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 926 of lcl|scaffold_476 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_476:c>6186-6137, c4885-4689, c4333-4237, c4148-4033, c3783-3581, c3167-3003, c2773-2640, c2127-1997, c1066-<926)] [lcl|scaffold_476: raw, dna len= 6655]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_566:<2-68, 226-344, 591-787, 942-1125, 1227-1392, 1561-1685, 1774-2082, 2227-2430, 2523-2648, 3127-3297, 3396-3500, 3582-3677, 3811-3942, 4176-4193)] [lcl|scaffold_566: raw, dna len= 5800] -> [gnl|ncbi|FUN_045131-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 602 of lcl|scaffold_571 FEATURE: CDS: hypothetical protein [(lcl|scaffold_571:<1-21, 481-602, 1924-2087, 2746-2920, 3282-3363, 4657->4781)] [lcl|scaffold_571: raw, dna len= 5743] -> [gnl|ncbi|FUN_045134-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 602 of lcl|scaffold_571 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_571:<1-21, 481-602, 1924-2087, 2746-2920, 3282-3363, 4657->4781)] [lcl|scaffold_571: raw, dna len= 5743]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_586:<539-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615] -> [gnl|ncbi|FUN_045146-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_586:<539-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615] -> [gnl|ncbi|FUN_045146-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 539 of lcl|scaffold_586 FEATURE: CDS: hypothetical protein [(lcl|scaffold_586:<539-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615] -> [gnl|ncbi|FUN_045146-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5470 of lcl|scaffold_586 FEATURE: CDS: hypothetical protein [(lcl|scaffold_586:<539-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615] -> [gnl|ncbi|FUN_045146-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_586:<537-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 537 of lcl|scaffold_586 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_586:<537-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5470 of lcl|scaffold_586 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_586:<537-613, 2085-2183, 2466-2589, 2993-3099, 4482-4547, 4877-5002, 5259->5470)] [lcl|scaffold_586: raw, dna len= 5615]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_596:c>5436-5347, c5159-4973, c2899-2828, c2108-2008)] [lcl|scaffold_596: delta, dna len= 5539] -> [gnl|ncbi|FUN_045160-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5436 of lcl|scaffold_596 FEATURE: CDS: hypothetical protein [(lcl|scaffold_596:c>5436-5347, c5159-4973, c2899-2828, c2108-2008)] [lcl|scaffold_596: delta, dna len= 5539] -> [gnl|ncbi|FUN_045160-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5436 of lcl|scaffold_596 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_596:c>5436-5347, c5159-4973, c2899-2828, c2108-2008)] [lcl|scaffold_596: delta, dna len= 5539]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_641:c>5188-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225] -> [gnl|ncbi|FUN_045191-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_641:c>5188-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225] -> [gnl|ncbi|FUN_045191-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5188 of lcl|scaffold_641 FEATURE: CDS: hypothetical protein [(lcl|scaffold_641:c>5188-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225] -> [gnl|ncbi|FUN_045191-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 227 of lcl|scaffold_641 FEATURE: CDS: hypothetical protein [(lcl|scaffold_641:c>5188-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225] -> [gnl|ncbi|FUN_045191-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_641:c>5189-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5189 of lcl|scaffold_641 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_641:c>5189-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 227 of lcl|scaffold_641 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_641:c>5189-5048, c4802-4584, c4341-4227, c4001-3841, c3392-3191, c3016-2832, c2698-2437, c2114-1948, c941-773, c539-431, c331-<227)] [lcl|scaffold_641: raw, dna len= 5225]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_716:c>4457-4326, c4059-3888, c3485-3376)] [lcl|scaffold_716: raw, dna len= 4866] -> [gnl|ncbi|FUN_045249-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4457 of lcl|scaffold_716 FEATURE: CDS: hypothetical protein [(lcl|scaffold_716:c>4457-4326, c4059-3888, c3485-3376)] [lcl|scaffold_716: raw, dna len= 4866] -> [gnl|ncbi|FUN_045249-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4457 of lcl|scaffold_716 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_716:c>4457-4326, c4059-3888, c3485-3376)] [lcl|scaffold_716: raw, dna len= 4866]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_726:c>4598-4485, c4140-4015, c3066-2964, c2678-2614, c2304-2030, c1019-878, c783-700, c320-<149)] [lcl|scaffold_726: delta, dna len= 4789] -> [gnl|ncbi|FUN_045258-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4598 of lcl|scaffold_726 FEATURE: CDS: hypothetical protein [(lcl|scaffold_726:c>4598-4485, c4140-4015, c3066-2964, c2678-2614, c2304-2030, c1019-878, c783-700, c320-<149)] [lcl|scaffold_726: delta, dna len= 4789] -> [gnl|ncbi|FUN_045258-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_726:c>4600-4485, c4140-4015, c3066-2964, c2678-2614, c2304-2030, c1019-878, c783-700, c320-<149)] [lcl|scaffold_726: delta, dna len= 4789]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1111:c>1929-1760, c1407-1324, c578-<457)] [lcl|scaffold_1111: raw, dna len= 3257]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1929 of lcl|scaffold_1111 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1111:c>1929-1760, c1407-1324, c578-<457)] [lcl|scaffold_1111: raw, dna len= 3257]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1471:<1029-1116, 1288-2346)] [lcl|scaffold_1471: delta, dna len= 2370]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1029 of lcl|scaffold_1471 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1471:<1029-1116, 1288-2346)] [lcl|scaffold_1471: delta, dna len= 2370]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1631:<1408-1671] [lcl|scaffold_1631: raw, dna len= 2117] -> [gnl|ncbi|FUN_045702-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1631:<1406-1988, 2017-2034)] [lcl|scaffold_1631: raw, dna len= 2117]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1646:c>2092-2069, c1925-1809, c1608-1426, c1045-948, c493-373, c152-<34)] [lcl|scaffold_1646: delta, dna len= 2095] -> [gnl|ncbi|FUN_045708-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2092 of lcl|scaffold_1646 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1646:c>2092-2069, c1925-1809, c1608-1426, c1045-948, c493-373, c152-<34)] [lcl|scaffold_1646: delta, dna len= 2095] -> [gnl|ncbi|FUN_045708-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1646:c>2094-2069, c1925-1809, c1608-1426, c1045-948, c493-373, c152-<34)] [lcl|scaffold_1646: delta, dna len= 2095]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1676:c>2025-1924, c1745-1648, c1437-1290)] [lcl|scaffold_1676: raw, dna len= 2063] -> [gnl|ncbi|FUN_045720-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2025 of lcl|scaffold_1676 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1676:c>2025-1924, c1745-1648, c1437-1290)] [lcl|scaffold_1676: raw, dna len= 2063] -> [gnl|ncbi|FUN_045720-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1676:c>2026-1924, c1745-1648, c1437-1290)] [lcl|scaffold_1676: raw, dna len= 2063]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1821:c>1702-1504, c1362-1025, c457-<385)] [lcl|scaffold_1821: delta, dna len= 1911] -> [gnl|ncbi|FUN_045776-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1821:c>1702-1504, c1362-1025, c457-<385)] [lcl|scaffold_1821: delta, dna len= 1911] -> [gnl|ncbi|FUN_045776-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1702 of lcl|scaffold_1821 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1821:c>1702-1504, c1362-1025, c457-<385)] [lcl|scaffold_1821: delta, dna len= 1911] -> [gnl|ncbi|FUN_045776-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 385 of lcl|scaffold_1821 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1821:c>1702-1504, c1362-1025, c457-<385)] [lcl|scaffold_1821: delta, dna len= 1911] -> [gnl|ncbi|FUN_045776-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1821:c>1703-1504, c1362-1025, c457-<385)] [lcl|scaffold_1821: delta, dna len= 1911]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 385 of lcl|scaffold_1821 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1821:c>1703-1504, c1362-1025, c457-<385)] [lcl|scaffold_1821: delta, dna len= 1911]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1901:c>1205-1086, c556-242)] [lcl|scaffold_1901: raw, dna len= 1795] -> [gnl|ncbi|FUN_045803-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1205 of lcl|scaffold_1901 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1901:c>1205-1086, c556-242)] [lcl|scaffold_1901: raw, dna len= 1795] -> [gnl|ncbi|FUN_045803-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1901:c>1206-1086, c556-226)] [lcl|scaffold_1901: raw, dna len= 1795]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2041:c>1462-1409, c1014-857, c498-309)] [lcl|scaffold_2041: delta, dna len= 1639] -> [gnl|ncbi|FUN_045849-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1462 of lcl|scaffold_2041 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2041:c>1462-1409, c1014-857, c498-309)] [lcl|scaffold_2041: delta, dna len= 1639] -> [gnl|ncbi|FUN_045849-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2041:c>1464-1409, c1014-857, c498-309)] [lcl|scaffold_2041: delta, dna len= 1639]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2326:<17-75, 350-545, 800->1051)] [lcl|scaffold_2326: raw, dna len= 1379]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 17 of lcl|scaffold_2326 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2326:<17-75, 350-545, 800->1051)] [lcl|scaffold_2326: raw, dna len= 1379]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2361:c>831-727, c399-<23)] [lcl|scaffold_2361: raw, dna len= 1348] -> [gnl|ncbi|FUN_045959-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 831 of lcl|scaffold_2361 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2361:c>831-727, c399-<23)] [lcl|scaffold_2361: raw, dna len= 1348] -> [gnl|ncbi|FUN_045959-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2361:c>832-727, c399-<23)] [lcl|scaffold_2361: raw, dna len= 1348]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 832 of lcl|scaffold_2361 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2361:c>832-727, c399-<23)] [lcl|scaffold_2361: raw, dna len= 1348]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_2391:<115->337] [lcl|scaffold_2391: raw, dna len= 1324] -> [gnl|ncbi|FUN_045972-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2426:c>603-469, c135-<26)] [lcl|scaffold_2426: raw, dna len= 1299] -> [gnl|ncbi|FUN_045982-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 603 of lcl|scaffold_2426 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2426:c>603-469, c135-<26)] [lcl|scaffold_2426: raw, dna len= 1299] -> [gnl|ncbi|FUN_045982-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2426:c>604-469, c135-<26)] [lcl|scaffold_2426: raw, dna len= 1299]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2466:<39-156, 428-796, 1170-1270)] [lcl|scaffold_2466: raw, dna len= 1270]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 39 of lcl|scaffold_2466 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2466:<39-156, 428-796, 1170-1270)] [lcl|scaffold_2466: raw, dna len= 1270]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2496:<4-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245] -> [gnl|ncbi|FUN_045999-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2496:<4-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245] -> [gnl|ncbi|FUN_045999-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4 of lcl|scaffold_2496 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2496:<4-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245] -> [gnl|ncbi|FUN_045999-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1202 of lcl|scaffold_2496 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2496:<4-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245] -> [gnl|ncbi|FUN_045999-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2496:<3-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3 of lcl|scaffold_2496 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2496:<3-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1202 of lcl|scaffold_2496 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2496:<3-261, 425-523, 1025->1202)] [lcl|scaffold_2496: delta, dna len= 1245]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2581:c>976-835, c204-<1)] [lcl|scaffold_2581: delta, dna len= 1190] -> [gnl|ncbi|FUN_046015-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 976 of lcl|scaffold_2581 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2581:c>976-835, c204-<1)] [lcl|scaffold_2581: delta, dna len= 1190] -> [gnl|ncbi|FUN_046015-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2581:c>978-835, c204-<1)] [lcl|scaffold_2581: delta, dna len= 1190]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 978 of lcl|scaffold_2581 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2581:c>978-835, c204-<1)] [lcl|scaffold_2581: delta, dna len= 1190]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_2621:c>964-<457] [lcl|scaffold_2621: raw, dna len= 1172] -> [gnl|ncbi|FUN_046024-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_2716:c>1113-724] [lcl|scaffold_2716: raw, dna len= 1138] -> [gnl|ncbi|FUN_046049-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2856:<54-193, 477->617)] [lcl|scaffold_2856: raw, dna len= 1110]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 54 of lcl|scaffold_2856 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2856:<54-193, 477->617)] [lcl|scaffold_2856: raw, dna len= 1110]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3026:81-93, 246-357, 615->743)] [lcl|scaffold_3026: raw, dna len= 1080] -> [gnl|ncbi|FUN_046118-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 743 of lcl|scaffold_3026 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3026:81-93, 246-357, 615->743)] [lcl|scaffold_3026: raw, dna len= 1080] -> [gnl|ncbi|FUN_046118-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 743 of lcl|scaffold_3026 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3026:1-93, 246-357, 615->743)] [lcl|scaffold_3026: raw, dna len= 1080]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [lcl|scaffold_3561:c>690-191] [lcl|scaffold_3561: raw, dna len= 1000]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3145 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:1330-1406, 1623-1696, 2891-3145, 4261-4572, 5681-5944, 10727-10915, 11165-11302, 11373-11506)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002245-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:758955-759008, 760124-760156, 760726-760791, 761134-761233, 761400-761505, 761967-761976, 763915-764040, 765060-765305, 765652-765753, 766932-767255, 767475-767651, 767819-767870, 768270-768349, 768488-768548, 769440-769603, 770228-770383, 770807-770882, 773233-773336, 773596-774724, 774860-774999)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002326-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 798904 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:798697-798904, 799312-799409, 800839-800968, 801067-801216, 801351-801490, 802474-802518, 802852-802969, 804253-804403, 806398-806687, 806725-807219, 808993-809294, 809477-809569, 810109-810321)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002330-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:921025-921041, 921367-921532, 921586-921599, 921611-921756, 922135-922278, 922496-922914, 923017-923150, 923244-923514, 923764-923892, 926763-926806, 928972-929053, 930610-930747, 931664-931762, 932579-932662, 933152-933263, 933884-933948)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002348-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 930747 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:921025-921041, 921367-921532, 921586-921599, 921611-921756, 922135-922278, 922496-922914, 923017-923150, 923244-923514, 923764-923892, 926763-926806, 928972-929053, 930610-930747, 931664-931762, 932579-932662, 933152-933263, 933884-933948)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002348-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:943783-943821, 943934-943940, 944574-944613, 944753-944760, 946711-946893, 947804-947821, 948714-948732, 948886-948931, 949064-949180, 949508-949585, 950017-950130, 950379-950495)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002350-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c2022908-2022815, c2021194-2021038, c2020746-2020737, c2020484-2020133, c2019445-2019306)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002473-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2591921 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c2601747-2601656, c2599132-2598688, c2596592-2596503, c2595283-2595138, c2594586-2594430, c2593662-2593524, c2593060-2593002, c2592910-2592764, c2592093-2591921, c2590256-2590226, c2590071-2589991, c2589604-2589479, c2589156-2589004, c2588522-2588382, c2588228-2587974)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002528-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2591921 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c2598933-2598688, c2596592-2596503, c2595283-2595138, c2594586-2594430, c2593662-2593524, c2593060-2593002, c2592910-2592764, c2592093-2591921, c2590256-2590226, c2590071-2589991, c2589604-2589479, c2589156-2589004, c2588522-2588382, c2588228-2587974)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002528-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2792703 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c2795387-2795264, c2794094-2794011, c2793862-2793735, c2793406-2793226, c2793111-2792964, c2792808-2792703, c2792510-2792157, c2792035-2791843, c2791678-2791560, c2791461-2791357, c2791055-2790873)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002548-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2986296 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:2977397-2977738, 2979378-2979533, 2980104-2980229, 2980520-2980582, 2981998-2982153, 2982728-2982844, 2984522-2984860, 2985435-2985584, 2985831-2985950, 2986093-2986296, 2986512-2986712, 2987706-2987819, 2987933-2988088, 2988253-2988392, 2989382-2989712, 2989998-2990099, 2990255-2990449, 2990574-2990756, 2991020-2991205, 2991566-2991697, 2991857-2992042, 2992263-2992501, 2992963-2993083, 2993173-2993271, 2993740-2993862)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002575-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2990449 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:2977397-2977738, 2979378-2979533, 2980104-2980229, 2980520-2980582, 2981998-2982153, 2982728-2982844, 2984522-2984860, 2985435-2985584, 2985831-2985950, 2986093-2986296, 2986512-2986712, 2987706-2987819, 2987933-2988088, 2988253-2988392, 2989382-2989712, 2989998-2990099, 2990255-2990449, 2990574-2990756, 2991020-2991205, 2991566-2991697, 2991857-2992042, 2992263-2992501, 2992963-2993083, 2993173-2993271, 2993740-2993862)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002575-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3004243 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c3008984-3008907, c3007730-3007654, c3007137-3007019, c3006668-3006628, c3006286-3006164, c3005704-3005555, c3004980-3004885, c3004344-3004243, c3003711-3003598, c3002940-3002782, c2997852-2997699, c2997248-2997151, c2996583-2996485)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002576-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3511763 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c3525036-3524089, c3523601-3523517, c3523165-3523014, c3522898-3522803, c3522091-3521940, c3521173-3521144, c3521005-3520885, c3520700-3520426, c3517723-3517544, c3517124-3517005, c3516662-3516576, c3516004-3515753, c3513580-3513458, c3513118-3512898, c3512745-3512477, c3511862-3511763, c3511445-3511271, c3510060-3509814)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002633-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:<3634289-3634372, 3637020-3637555, 3637669-3637768, 3637961-3638034, 3638209-3638279, 3638419-3638626, 3638766-3638806, 3638933-3639008, 3639146-3639223, 3640933-3641013, 3641099-3641193, 3641510-3641559)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002642-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3634289 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:<3634289-3634372, 3637020-3637555, 3637669-3637768, 3637961-3638034, 3638209-3638279, 3638419-3638626, 3638766-3638806, 3638933-3639008, 3639146-3639223, 3640933-3641013, 3641099-3641193, 3641510-3641559)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002642-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3689372 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c3695361-3695284, c3694806-3694763, c3694628-3694556, c3694438-3694337, c3694226-3694108, c3693752-3693667, c3693013-3692896, c3692737-3692569, c3692417-3692322, c3692219-3692136, c3692010-3691844, c3691480-3691280, c3691145-3691026, c3690934-3690754, c3690531-3690463, c3690229-3690120, c3689946-3689850, c3689765-3689699, c3689544-3689372, c3688864-3688762, c3688519-3688316, c3688205-3688069, c3687885-3687774, c3687634-3687467, c3687349-3687261, c3687023-3686836, c3686706-3686664)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002648-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3764094 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c3765518-3765417, c3765133-3765061, c3764273-3764094, c3764033-3763932, c3763825-3763669, c3763184-3763073, c3761891-3761829, c3761011-3760959, c3760211-3760124, c3760017-3759932, c3759823-3759342, c3759166-3759037, c3758515-3758310, c3758001-3757917, c3755569-3755465, c3754426-3754324)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002658-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3807183 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c3808943-3808923, c3808434-3808323, c3808005-3807861, c3807479-3807418, c3807302-3807183, c3806967-3806811, c3806640-3806492, c3806373-3806292, c3806203-3805984, c3805856-3805716, c3805617-3805516)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002666-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4478449 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:4465889-4466077, 4466444-4466662, 4468712-4468811, 4469588-4469703, 4470044-4470216, 4471663-4471915, 4474942-4475090, 4475336-4475456, 4475699-4475810, 4477258-4477361, 4478280-4478449, 4479474-4479700, 4480673-4481533, 4482261-4482393, 4482701-4482803)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002739-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4578059 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:4566018-4566281, 4568587-4568794, 4569099-4569215, 4569760-4569861, 4570604-4570759, 4571115-4571215, 4572299-4572556, 4572858-4572973, 4573273-4573399, 4573643-4573733, 4575134-4575281, 4576377-4576576, 4577086-4577189, 4577601-4577672, 4577925-4578059, 4578718-4578846, 4578984-4579214, 4579829-4579933, 4580563-4580907, 4581031-4581123, 4581337-4581429, 4581988-4582177, 4582429-4582502, 4582671-4582722, 4584517-4584578)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002744-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4578059 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:4571168-4571215, 4572299-4572556, 4572858-4572973, 4573273-4573399, 4573643-4573733, 4575134-4575281, 4576377-4576576, 4577086-4577189, 4577601-4577672, 4577925-4578059, 4578718-4578846, 4578984-4579214, 4579829-4579933, 4580563-4580907, 4581031-4581123, 4581337-4581429, 4581988-4582177, 4582429-4582502, 4582671-4582988)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002744-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4578059 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:4566018-4566281, 4568587-4568794, 4569099-4569215, 4569760-4569861, 4570604-4570759, 4571115-4571215, 4572299-4572556, 4572858-4572973, 4573273-4573399, 4573643-4573733, 4575134-4575281, 4576377-4576576, 4577086-4577189, 4577601-4577672, 4577925-4578059, 4578718-4578846, 4578984-4579253)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002744-T3]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4786233 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:4785213-4785333, 4785557-4785655, 4786112-4786233, 4787032-4787168, 4787341-4787423, 4787954-4788145, 4788492-4788496)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002769-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4787032 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:4785213-4785333, 4785557-4785655, 4786112-4786233, 4787032-4787168, 4787341-4787423, 4787954-4788145, 4788492-4788496)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002769-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c5130335-5130238, c5129772-5129623, c5129453-5129375, c5129188-5129165, c5128994-5128941, c5126237-5126085, c5125683-5125620, c5125448-5125405, c5124933-5124808, c5124687-5124652, c5124584-5124509, c5123035-5122941, c5122363-5122226, c5121048-5120077, c5119412-5119270, c5118808-5118643, c5118386-5118251, c5117578-5117417, c5117251-5117093, c5116805-5116609, c5116470-5116459, c5116310-5116227, c5116078-5115988, c5115767-5115670)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002801-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5198571 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c5199198-5199141, c5198642-5198571, c5198068-5197998, c5196889-5196659, c5196448-5196380)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002812-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:5246752-5246830, 5247213-5247221, 5248437-5248539, 5248651-5248940, 5249365-5249622, 5250430-5250642, 5250826-5250936, 5251044-5251153, 5251310-5251426, 5251661-5251728, 5251821-5251923, 5252145-5252296, 5253178-5253339, 5253557-5253701, 5254011-5254199, 5254411-5254583, 5254678-5254793, 5254967-5255097, 5255193-5255343, 5255488-5255565, 5255913-5256053, 5256191-5256316, 5256396-5256522, 5256664-5256794, 5257059-5257264)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002820-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5255097 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:5246752-5246830, 5247213-5247221, 5248437-5248539, 5248651-5248940, 5249365-5249622, 5250430-5250642, 5250826-5250936, 5251044-5251153, 5251310-5251426, 5251661-5251728, 5251821-5251923, 5252145-5252296, 5253178-5253339, 5253557-5253701, 5254011-5254199, 5254411-5254583, 5254678-5254793, 5254967-5255097, 5255193-5255343, 5255488-5255565, 5255913-5256053, 5256191-5256316, 5256396-5256522, 5256664-5256794, 5257059-5257264)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002820-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5714696 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:5713129-5713193, 5713310-5713444, 5713524-5713620, 5713805-5713902, 5714060-5714164, 5714393-5714461, 5714570-5714696, 5714777-5714842, 5714927-5714986, 5715079-5715168, 5715273-5715379, 5715499-5715566, 5715675-5715927, 5716197-5716287, 5716398-5716483, 5716604-5716660, 5716757-5716838, 5716997-5717197, 5717365-5717524, 5717667-5717683)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002862-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c6209185-6209005, c6208832-6208818, c6207699-6207654, c6207137-6207131)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002913-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6378610 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c6380399-6380334, c6379680-6379401, c6378929-6378765, c6378657-6378610, c6378494-6378450, c6378173-6378058)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002925-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:6581780-6581865, 6583766-6583886, 6585204-6585543, 6586655-6587321, 6588781-6589263, 6590259-6590413, 6591126-6591308, 6592831-6592883, 6593219-6593293, 6594610-6594693, 6594943-6595072, 6595235-6595389, 6596687-6596695, 6596891-6597063, 6597887-6598040, 6598427-6598571, 6598715-6598812, 6599303-6599471, 6599655-6599890, 6600013-6600167, 6600521-6600717, 6600809-6600927, 6601146-6601349, 6601531-6601659)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002946-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:6899089-6899166, 6899410-6899421, 6900292-6900363, 6901551-6901625, 6901831-6902032, 6902109-6902220, 6902392-6902449, 6903024-6903124, 6903214-6903385)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_046270-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7042420 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7042401-7042420, 7042599-7042724, 7042837-7042920, 7043193-7043274, 7043644-7043726, 7046674-7046741, 7046945-7047117)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002981-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7042420 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7041959-7042049, 7042360-7042420, 7042837-7042920, 7043193-7043274, 7043644-7043726, 7046674-7046741, 7046945-7047117)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_002981-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7781032 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7778758-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7782119-7782194, 7782468-7782530, 7782620-7782689, 7785426-7785508)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003036-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7782530 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7778758-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7782119-7782194, 7782468-7782530, 7782620-7782689, 7785426-7785508)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003036-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7781032 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7778758-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7781545-7781620, 7782468-7782530, 7782620-7782689, 7783101-7783179, 7784365-7784368)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003036-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7782530 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7778758-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7781545-7781620, 7782468-7782530, 7782620-7782689, 7783101-7783179, 7784365-7784368)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003036-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:7874217-7874253, 7874761-7874774, 7875331-7875372, 7875458-7875560, 7875648-7875844, 7875941-7876054, 7876265-7876358, 7876446-7876588, 7876881-7877024)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003046-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7922592 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c7932854-7932712, c7932034-7931913, c7931515-7931398, c7931312-7929977, c7927812-7925322, c7925079-7924932, c7924498-7924371, c7924288-7924253, c7924142-7923871, c7923086-7922998, c7922809-7922592, c7922488-7922440, c7922294-7921934)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003052-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8319924 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:8307925-8307929, 8309409-8309643, 8309906-8309992, 8311341-8311402, 8311991-8312101, 8312474-8312656, 8312887-8313026, 8313236-8313461, 8313550-8313650, 8313813-8313854, 8313970-8314151, 8314284-8314408, 8314584-8314800, 8314898-8314987, 8315102-8315292, 8315401-8315589, 8315724-8315886, 8316093-8316245, 8316746-8316817, 8317225-8317374, 8317477-8317625, 8317723-8317819, 8317914-8318006, 8318114-8318287, 8318801-8319012, 8319113-8319252, 8319326-8319464, 8319548-8319698, 8319802-8319924, 8320057-8320179, 8320310-8320450, 8320701-8320814, 8321027-8321205, 8321302-8321401, 8321523-8321724, 8321829-8322078, 8322427-8322718)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003080-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8322078 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:8307925-8307929, 8309409-8309643, 8309906-8309992, 8311341-8311402, 8311991-8312101, 8312474-8312656, 8312887-8313026, 8313236-8313461, 8313550-8313650, 8313813-8313854, 8313970-8314151, 8314284-8314408, 8314584-8314800, 8314898-8314987, 8315102-8315292, 8315401-8315589, 8315724-8315886, 8316093-8316245, 8316746-8316817, 8317225-8317374, 8317477-8317625, 8317723-8317819, 8317914-8318006, 8318114-8318287, 8318801-8319012, 8319113-8319252, 8319326-8319464, 8319548-8319698, 8319802-8319924, 8320057-8320179, 8320310-8320450, 8320701-8320814, 8321027-8321205, 8321302-8321401, 8321523-8321724, 8321829-8322078, 8322427-8322718)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003080-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8856848 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:8856154-8856315, 8856452-8856575, 8856692-8856848, 8857187-8857316)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003114-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8857187 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:8856154-8856315, 8856452-8856575, 8856692-8856848, 8857187-8857316)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003114-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8954848 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:8953677-8953740, 8954642-8954667, 8954755-8954848, 8954976-8956459, 8956576-8956612, 8956708-8956793)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003127-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c9140304-9140294, c9140186-9140183, c9140004-9139966, c9139524-9139483, c9139363-9139232, c9138941-9138852, c9138641-9138459, c9138249-9138148)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003151-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9297051 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:9294818-9295045, 9295177-9295732, 9295828-9296127, 9296302-9296474, 9296600-9296684, 9296819-9297051, 9297237-9297431, 9297515-9297740, 9297886-9298424)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003174-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c9655490-9655439, c9654865-9654751, c9654494-9654481, c9653565-9653470, c9652858-9652748, c9651870-9651785)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003208-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c>10168721-10168540, c10168389-10168261, c10168085-10167935, c10167002-10166891, c10166723-10166635, c10166362-10166240, c10166077-10165952, c10165599-10165411, c10164757-10164569)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003252-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10168721 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c>10168721-10168540, c10168389-10168261, c10168085-10167935, c10167002-10166891, c10166723-10166635, c10166362-10166240, c10166077-10165952, c10165599-10165411, c10164757-10164569)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003252-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c10262906-10262842, c10262746-10262737, c10262258-10262194, c10261114-10260913, c10259478-10259338, c10259043-10258968, c10258185-10257853, c10255872-10255702, c10255411-10255244, c10254733-10254575, c10254349-10254002, c10253783-10253620)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003259-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10724602 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:10723484-10723538, 10723687-10723822, 10723929-10723985, 10724133-10724231, 10724524-10724602, 10724700-10724871, 10725079-10725217, 10725645-10725774)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003314-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10724602 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:10722568-10722635, 10722768-10722885, 10722999-10723067, 10723415-10723538, 10723687-10723822, 10723929-10723985, 10724133-10724231, 10724524-10724602, 10724700-10724871, 10725079-10725217, 10725645-10725774)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003314-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c11217189-11217147, c11216740-11216689, c11216306-11216295, c11214856-11214760)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003347-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11704358 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c11714865-11714823, c11713660-11713503, c11712136-11712001, c11711727-11711654, c11711347-11711159, c11710895-11710832, c11710689-11710420, c11709714-11709526, c11709365-11709210, c11708626-11708551, c11708399-11708243, c11708118-11707987, c11707528-11707343, c11706605-11706383, c11706027-11705884, c11705658-11705427, c11705279-11705158, c11704997-11704773, c11704575-11704358, c11704264-11704168, c11704066-11703703, c11703424-11703264, c11702984-11702782, c11702456-11702253, c11702015-11701871, c11701626-11701419, c11701219-11701084, c11700948-11700778, c11700636-11700483, c11700386-11700250)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003399-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11702253 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c11714865-11714823, c11713660-11713503, c11712136-11712001, c11711727-11711654, c11711347-11711159, c11710895-11710832, c11710689-11710420, c11709714-11709526, c11709365-11709210, c11708626-11708551, c11708399-11708243, c11708118-11707987, c11707528-11707343, c11706605-11706383, c11706027-11705884, c11705658-11705427, c11705279-11705158, c11704997-11704773, c11704575-11704358, c11704264-11704168, c11704066-11703703, c11703424-11703264, c11702984-11702782, c11702456-11702253, c11702015-11701871, c11701626-11701419, c11701219-11701084, c11700948-11700778, c11700636-11700483, c11700386-11700250)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003399-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13079168 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c13082582-13082493, c13082372-13082250, c13082153-13082002, c13081884-13081713, c13081585-13081384, c13081203-13081084, c13080666-13080542, c13080389-13080103, c13079988-13079910, c13079733-13079479, c13079308-13079168, c13079062-13078883, c13078750-13078634, c13078496-13078386, c13078259-13078182, c13077966-13077789, c13077481-13077351, c13077217-13076921, c13076599-13076459, c13076345-13076241, c13076119-13076000, c13075809-13075615, c13075454-13075203, c13075042-13074873, c13074698-13074467, c13074349-13074101, c13074025-13073862, c13073636-13073519, c13073399-13073298, c13073135-13072962, c13072699-13072550, c13072274-13072094, c13071804-13071672, c13071486-13071352, c13071027-13070949)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003510-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13073519 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c13082582-13082493, c13082372-13082250, c13082153-13082002, c13081884-13081713, c13081585-13081384, c13081203-13081084, c13080666-13080542, c13080389-13080103, c13079988-13079910, c13079733-13079479, c13079308-13079168, c13079062-13078883, c13078750-13078634, c13078496-13078386, c13078259-13078182, c13077966-13077789, c13077481-13077351, c13077217-13076921, c13076599-13076459, c13076345-13076241, c13076119-13076000, c13075809-13075615, c13075454-13075203, c13075042-13074873, c13074698-13074467, c13074349-13074101, c13074025-13073862, c13073636-13073519, c13073399-13073298, c13073135-13072962, c13072699-13072550, c13072274-13072094, c13071804-13071672, c13071486-13071352, c13071027-13070949)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003510-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13754397 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c13756721-13756719, c13755870-13755826, c13755735-13755634, c13755330-13755227, c13755132-13755044, c13754934-13754864, c13754725-13754596, c13754476-13754397, c13754319-13754215, c13754061-13754002)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003572-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13966616 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c13985480-13985355, c13982960-13982860, c13982040-13981880, c13978475-13978355, c13978191-13978080, c13977550-13977471, c13977357-13977294, c13977027-13976881, c13976760-13976733, c13976584-13976344, c13975264-13975142, c13975009-13974842, c13974604-13974496, c13974189-13974047, c13973308-13973120, c13971945-13971852, c13971694-13971600, c13971517-13971337, c13971241-13971137, c13969859-13969730, c13969633-13969497, c13969393-13969224, c13969024-13968868, c13968254-13968145, c13967851-13967644, c13967289-13967165, c13966905-13966788, c13966697-13966616, c13966418-13966309, c13966204-13966079, c13965979-13965797)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003590-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c14193844-14193810, c14193693-14193683, c14193587-14193570, c14193480-14193459, c14193352-14193295, c14193069-14192953, c14192829-14192752, c14192625-14192512, c14192427-14192315, c14192136-14192046, c14191447-14191410, c14190515-14190470)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003618-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c14221161-14221151, c14221017-14221011, c14220831-14220787, c14220661-14220530, c14220322-14220233, c14220118-14219945, c14219857-14219777)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003621-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c14228613-14228603, c14228452-14228449, c14228243-14228202, c14228090-14227959, c14227681-14227592, c14227478-14227305, c14227152-14227066)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003623-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c14232109-14232099, c14231969-14231966, c14231851-14231810, c14231614-14231483, c14231331-14231242, c14231143-14230973, c14230541-14230455)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003624-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14456743 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:14452449-14452695, 14453138-14453199, 14453280-14453352, 14453508-14453574, 14453665-14453702, 14453829-14453954, 14454139-14454278, 14454444-14454491, 14454681-14454828, 14454923-14455018, 14455142-14455200, 14455302-14455382, 14455553-14455618, 14455718-14455883, 14456001-14456135, 14456460-14456568, 14456674-14456743, 14456886-14457017)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003652-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14623014 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:14618388-14618436, 14618881-14618983, 14619392-14619533, 14619625-14619741, 14619822-14620153, 14620284-14620395, 14620497-14620616, 14620705-14620821, 14620917-14621054, 14621159-14621236, 14621349-14621414, 14621554-14621823, 14621995-14622240, 14622401-14622537, 14622652-14622730, 14622859-14623014, 14623110-14623202, 14623312-14623335)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003671-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:14667228-14667245, 14667334-14667511, 14668188-14668372, 14669594-14669755, 14670035-14670217, 14670871-14671139, 14672333-14672469, 14673627-14673641, 14674438-14674646, 14674770-14674993, 14675095-14675239, 14675449-14675772, 14677478-14677530, 14677885-14678021, 14678380-14678531, 14678670-14678900)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003678-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14754648 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:14751215-14751244, 14751910-14751987, 14752083-14752164, 14752837-14753008, 14753348-14753521, 14754004-14754079, 14754270-14754389, 14754589-14754648, 14754877-14754915, 14755511-14755592, 14755717-14755882, 14756973-14757132, 14757560-14757633, 14757946-14758033)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003686-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c15472119-15472084, c15471663-15471650, c15471084-15470964, c15469242-15469147, c15469057-15468994, c15468748-15468591, c15468390-15468264, c15467553-15466874)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003775-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:15989387-15989512, 15992095-15992130, 15994554-15994758, 15995168-15995175, 15995949-15996116, 15996854-15997060)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003840-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16061447 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c16061549-16061447, c16061257-16061178, c16061001-16060666)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003848-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16292358 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:16290208-16290366, 16291362-16291466, 16291627-16291749, 16291834-16291890, 16291998-16292141, 16292274-16292358, 16292472-16292532, 16292628-16292718, 16292805-16292863, 16293262-16293310, 16293644-16293739, 16293934-16294000, 16294091-16294122)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003878-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16403503 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:16402844-16402888, 16402968-16403098, 16403247-16403307, 16403416-16403503, 16403586-16403667, 16403751-16403877, 16404014-16404094, 16404377-16404515, 16404597-16404697, 16404783-16404974)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_003897-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c17600191-17600171, c17599144-17599070, c17598942-17598820, c17598709-17598570, c17598049-17598000, c17597907-17597849, c17597447-17597278, c17596906-17596772, c17596319-17596226, c17596040-17595980, c17595891-17595809, c17595684-17595580, c17595356-17595192, c17595075-17595039, c17594915-17594804, c17594680-17594623, c17594513-17594416, c17594311-17594127, c17594002-17593850, c17593749-17593602, c17593497-17593378, c17593257-17593164, c17593053-17592941, c17592859-17592850, c17590901-17590793, c17590563-17590359, c17589710-17589583, c17589135-17588992, c17588898-17588796, c17588409-17588259, c17587415-17587238, c17587143-17586971)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004010-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17838462 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c17841381-17840640, c17840510-17840370, c17840279-17840078, c17839967-17839734, c17839538-17839407, c17839304-17839196, c17839091-17838972, c17838867-17838703, c17838615-17838462, c17838352-17838249, c17838162-17837968, c17837709-17837581, c17837361-17837224)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004048-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c>18296003-18295782, c18295658-18295487, c18293977-18293913, c18293326-18293210, c18290415-18290202, c18289928-18289640, c18289393-18289348, c18287826-18287701)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004090-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18296003 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c>18296003-18295782, c18295658-18295487, c18293977-18293913, c18293326-18293210, c18290415-18290202, c18289928-18289640, c18289393-18289348, c18287826-18287701)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004090-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c18307071-18307021, c18304088-18304025, c18303641-18303495, c18302375-18302244, c18301314-18301221, c18299193-<18299155)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004091-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18299155 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c18307071-18307021, c18304088-18304025, c18303641-18303495, c18302375-18302244, c18301314-18301221, c18299193-<18299155)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004091-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:c19033164-19033033, c19032503-19032329, c19032186-19031935, c19031754-19031569, c19031312-19031055, c19030953-19030690, c19030508-19030242, c19029990-19029727, c19029639-19029370, c19029147-19028878, c19028591-19028304, c19028162-19028016, c19027747-19027549, c19027425-19027304, c19026916-19026832, c19026712-19026668, c19026539-19026531, c19026247-19026160, c19026060-19025970, c19025614-19025541, c19025085-19024951, c19024786-19024670, c19023999-19023839, c19023677-19023542, c19023084-19022926)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004149-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20319672 of lcl|scaffold_2 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2:20316314-20316419, 20316553-20316661, 20317054-20317100, 20317212-20317279, 20317468-20317508, 20317945-20318046, 20318186-20318281, 20318499-20318554, 20318638-20318736, 20318838-20318935, 20319016-20319178, 20319593-20319672, 20320532-20320606)] [lcl|scaffold_2: delta, dna len= 20470143] -> [gnl|ncbi|FUN_004265-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3145 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:1330-1406, 1623-1696, 2891-3145, 4261-4572, 5681-5944, 10727-10915, 11165-11302, 11373-11506)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 798904 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:798691-798904, 799312-799409, 800839-800968, 801067-801216, 801351-801490, 802474-802518, 802852-802969, 804253-804403, 806398-806687, 806725-807219, 808993-809294, 809477-809569, 810109-810321)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 930747 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:921025-921041, 921367-921532, 921586-921599, 921611-921756, 922135-922278, 922496-922914, 923017-923150, 923244-923514, 923764-923892, 926763-926806, 928972-929053, 930610-930747, 931664-931762, 932579-932662, 933152-933263, 933884-933948)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1068444 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c1073136-1073077, c1072840-1072700, c1072627-1072417, c1072319-1072194, c1071693-1071583, c1071257-1071142, c1070456-1070256, c1068637-1068444, c1067452-1067012, c1066822-1065540)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2591921 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c2603595-2603521, c2601836-2601656, c2599132-2598688, c2596592-2596503, c2595283-2595138, c2594586-2594430, c2593662-2593524, c2593060-2593002, c2592910-2592764, c2592093-2591921, c2590256-2590226, c2590071-2589991, c2589604-2589479, c2589156-2589004, c2588522-2588382, c2588228-2586545, c2586296-2586053)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2586545 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c2603595-2603521, c2601836-2601656, c2599132-2598688, c2596592-2596503, c2595283-2595138, c2594586-2594430, c2593662-2593524, c2593060-2593002, c2592910-2592764, c2592093-2591921, c2590256-2590226, c2590071-2589991, c2589604-2589479, c2589156-2589004, c2588522-2588382, c2588228-2586545, c2586296-2586053)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2591921 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c2599259-2598688, c2596592-2596503, c2595283-2595138, c2594586-2594430, c2593662-2593524, c2593060-2593002, c2592910-2592764, c2592093-2591921, c2590256-2590226, c2590071-2589991, c2589604-2589479, c2589156-2589004, c2588522-2588382, c2588228-2586623)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2792703 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c2795398-2795264, c2794094-2794011, c2793862-2793735, c2793406-2793226, c2793111-2792964, c2792808-2792703, c2792510-2792157, c2792035-2791843, c2791678-2791560, c2791461-2791357, c2791055-2790470, c2789933-2789788)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2986296 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:2977397-2977738, 2979378-2979533, 2980104-2980229, 2980520-2980582, 2981998-2982153, 2982728-2982844, 2984522-2984860, 2985435-2985584, 2985831-2985950, 2986093-2986296, 2986512-2986712, 2987706-2987819, 2987933-2988088, 2988253-2988392, 2989382-2989712, 2989998-2990099, 2990255-2990449, 2990574-2990756, 2991020-2991205, 2991566-2991697, 2991857-2992042, 2992263-2992501, 2992963-2993083, 2993173-2993271, 2993740-2993907)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2990449 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:2977397-2977738, 2979378-2979533, 2980104-2980229, 2980520-2980582, 2981998-2982153, 2982728-2982844, 2984522-2984860, 2985435-2985584, 2985831-2985950, 2986093-2986296, 2986512-2986712, 2987706-2987819, 2987933-2988088, 2988253-2988392, 2989382-2989712, 2989998-2990099, 2990255-2990449, 2990574-2990756, 2991020-2991205, 2991566-2991697, 2991857-2992042, 2992263-2992501, 2992963-2993083, 2993173-2993271, 2993740-2993907)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3004243 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c3008984-3008907, c3007730-3007654, c3007137-3007019, c3006668-3006628, c3006286-3006164, c3005704-3005555, c3004980-3004885, c3004344-3004243, c3003711-3003598, c3002940-3002782, c2997852-2997699, c2997248-2997151, c2996583-2996355)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3511763 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c3525976-3525816, c3525050-3524089, c3523601-3523517, c3523165-3523014, c3522898-3522803, c3522091-3521940, c3521173-3521144, c3521005-3520885, c3520700-3520426, c3517723-3517544, c3517124-3517005, c3516662-3516576, c3516004-3515753, c3513580-3513458, c3513118-3512898, c3512745-3512477, c3511862-3511763, c3511445-3511271, c3510060-3508744)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:<3634288-3634372, 3637020-3637555, 3637669-3637768, 3637961-3638034, 3638209-3638279, 3638419-3638626, 3638766-3638806, 3638933-3639008, 3639146-3639223, 3640933-3641013, 3641099-3641193, 3641510-3643639)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3689372 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c3695361-3695284, c3694806-3694763, c3694628-3694556, c3694438-3694337, c3694226-3694108, c3693752-3693667, c3693013-3692896, c3692737-3692569, c3692417-3692322, c3692219-3692136, c3692010-3691844, c3691480-3691280, c3691145-3691026, c3690934-3690754, c3690531-3690463, c3690229-3690120, c3689946-3689850, c3689765-3689699, c3689544-3689372, c3688864-3688762, c3688519-3688316, c3688205-3688069, c3687885-3687774, c3687634-3687467, c3687349-3687261, c3687023-3686836, c3686706-3686537)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3764094 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c3765531-3765417, c3765133-3765061, c3764273-3764094, c3764033-3763932, c3763825-3763669, c3763184-3763073, c3761891-3761829, c3761011-3760959, c3760211-3760124, c3760017-3759932, c3759823-3759342, c3759166-3759037, c3758515-3758310, c3758001-3757917, c3755569-3755465, c3754426-3754315, c3753324-3751741)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3807183 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c3809156-3808923, c3808434-3808323, c3808005-3807861, c3807479-3807418, c3807302-3807183, c3806967-3806811, c3806640-3806492, c3806373-3806292, c3806203-3805984, c3805856-3805716, c3805617-3804421)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4478449 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:4464476-4464513, 4465864-4466077, 4466444-4466662, 4468712-4468811, 4469588-4469703, 4470044-4470216, 4471663-4471915, 4474942-4475090, 4475336-4475456, 4475699-4475810, 4477258-4477361, 4478280-4478449, 4479474-4479700, 4480673-4481533, 4482261-4482393, 4482701-4483688)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4578059 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:4565969-4566281, 4568587-4568794, 4569099-4569215, 4569760-4569861, 4570604-4570759, 4571115-4571215, 4572299-4572556, 4572858-4572973, 4573273-4573399, 4573643-4573733, 4575134-4575281, 4576377-4576576, 4577086-4577189, 4577601-4577672, 4577925-4578059, 4578718-4578846, 4578984-4579214, 4579829-4579933, 4580563-4580907, 4581031-4581123, 4581337-4581429, 4581988-4582177, 4582429-4582502, 4582671-4582722, 4584517-4584828)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4578059 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:4570439-4570759, 4571115-4571215, 4572299-4572556, 4572858-4572973, 4573273-4573399, 4573643-4573733, 4575134-4575281, 4576377-4576576, 4577086-4577189, 4577601-4577672, 4577925-4578059, 4578718-4578846, 4578984-4579214, 4579829-4579933, 4580563-4580907, 4581031-4581123, 4581337-4581429, 4581988-4582177, 4582429-4582502, 4582671-4583696)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4578059 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:4565969-4566281, 4568587-4568794, 4569099-4569215, 4569760-4569861, 4570604-4570759, 4571115-4571215, 4572299-4572556, 4572858-4572973, 4573273-4573399, 4573643-4573733, 4575134-4575281, 4576377-4576576, 4577086-4577189, 4577601-4577672, 4577925-4578059, 4578718-4578846, 4578984-4580019)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4786233 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:4784286-4784342, 4785014-4785062, 4785205-4785333, 4785557-4785655, 4786112-4786233, 4787032-4787168, 4787341-4787423, 4787954-4788145, 4788492-4788863)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4787032 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:4784286-4784342, 4785014-4785062, 4785205-4785333, 4785557-4785655, 4786112-4786233, 4787032-4787168, 4787341-4787423, 4787954-4788145, 4788492-4788863)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5200991 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c5201112-5200991, c5199366-5199141, c5198642-5198571, c5198068-5197998, c5196889-5196659, c5196448-5196245, c5196149-5195967)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5198571 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c5201112-5200991, c5199366-5199141, c5198642-5198571, c5198068-5197998, c5196889-5196659, c5196448-5196245, c5196149-5195967)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5255097 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:5246752-5246830, 5247213-5247221, 5248437-5248539, 5248651-5248940, 5249365-5249622, 5250430-5250642, 5250826-5250936, 5251044-5251153, 5251310-5251426, 5251661-5251728, 5251821-5251923, 5252145-5252296, 5253178-5253339, 5253557-5253701, 5254011-5254199, 5254411-5254583, 5254678-5254793, 5254967-5255097, 5255193-5255343, 5255488-5255565, 5255913-5256053, 5256191-5256316, 5256396-5256522, 5256664-5256794, 5257059-5257775)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5714696 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:5712926-5712985, 5713108-5713193, 5713310-5713444, 5713524-5713620, 5713805-5713902, 5714060-5714164, 5714393-5714461, 5714570-5714696, 5714777-5714842, 5714927-5714986, 5715079-5715168, 5715273-5715379, 5715499-5715566, 5715675-5715927, 5716197-5716287, 5716398-5716483, 5716604-5716660, 5716757-5716838, 5716997-5717197, 5717365-5717524, 5717667-5717797)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6378610 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c6380399-6380334, c6379680-6379401, c6378929-6378765, c6378657-6378610, c6378494-6378450, c6378173-6377758)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7042420 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:7041745-7041779, 7042012-7042049, 7042367-7042420, 7042599-7042724, 7042837-7042920, 7043193-7043274, 7043644-7043726, 7046674-7046741, 7046945-7047117)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7042420 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:7041959-7042049, 7042360-7042420, 7042837-7042920, 7043193-7043274, 7043644-7043726, 7046674-7046741, 7046945-7047117)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7781032 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:7778480-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7782119-7782194, 7782468-7782530, 7782620-7782689, 7785426-7786347)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7782530 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:7778480-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7782119-7782194, 7782468-7782530, 7782620-7782689, 7785426-7786347)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7781032 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:7778651-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7781545-7781620, 7782468-7782530, 7782620-7782689, 7783101-7783179, 7784365-7784952)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7782530 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:7778651-7778889, 7780322-7780455, 7780915-7781032, 7781275-7781345, 7781545-7781620, 7782468-7782530, 7782620-7782689, 7783101-7783179, 7784365-7784952)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7922592 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c7933388-7933317, c7933003-7932712, c7932034-7931913, c7931515-7931398, c7931312-7929977, c7927812-7925322, c7925079-7924932, c7924498-7924371, c7924288-7924253, c7924142-7923871, c7923086-7922998, c7922809-7922592, c7922488-7922440, c7922294-7919796)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8319924 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:8307925-8307929, 8309409-8309643, 8309906-8309992, 8311341-8311402, 8311991-8312101, 8312474-8312656, 8312887-8313026, 8313236-8313461, 8313550-8313650, 8313813-8313854, 8313970-8314151, 8314284-8314408, 8314584-8314800, 8314898-8314987, 8315102-8315292, 8315401-8315589, 8315724-8315886, 8316093-8316245, 8316746-8316817, 8317225-8317374, 8317477-8317625, 8317723-8317819, 8317914-8318006, 8318114-8318287, 8318801-8319012, 8319113-8319252, 8319326-8319464, 8319548-8319698, 8319802-8319924, 8320057-8320179, 8320310-8320450, 8320701-8320814, 8321027-8321205, 8321302-8321401, 8321523-8321724, 8321829-8322078, 8322427-8324381)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8322078 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:8307925-8307929, 8309409-8309643, 8309906-8309992, 8311341-8311402, 8311991-8312101, 8312474-8312656, 8312887-8313026, 8313236-8313461, 8313550-8313650, 8313813-8313854, 8313970-8314151, 8314284-8314408, 8314584-8314800, 8314898-8314987, 8315102-8315292, 8315401-8315589, 8315724-8315886, 8316093-8316245, 8316746-8316817, 8317225-8317374, 8317477-8317625, 8317723-8317819, 8317914-8318006, 8318114-8318287, 8318801-8319012, 8319113-8319252, 8319326-8319464, 8319548-8319698, 8319802-8319924, 8320057-8320179, 8320310-8320450, 8320701-8320814, 8321027-8321205, 8321302-8321401, 8321523-8321724, 8321829-8322078, 8322427-8324381)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8856848 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:8855524-8855720, 8856148-8856315, 8856452-8856575, 8856692-8856848, 8857187-8857316)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8857187 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:8855524-8855720, 8856148-8856315, 8856452-8856575, 8856692-8856848, 8857187-8857316)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8954848 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:8953677-8953740, 8954642-8954667, 8954755-8954848, 8954976-8956459, 8956576-8956612, 8956708-8956919)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9297051 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:9294669-9295045, 9295177-9295732, 9295828-9296127, 9296302-9296474, 9296600-9296684, 9296819-9297051, 9297237-9297431, 9297515-9297740, 9297886-9298889)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c>10178871-10178651, c10177501-10177409, c10175016-10174905, c10173980-10173919, c10173731-10173402, c10172571-10172504, c10172207-10172133, c10171227-10171167, c10170411-10170276, c10168675-10168540, c10168389-10168261, c10168085-10167935, c10167002-10166891, c10166723-10166635, c10166362-10166240, c10166077-10165952, c10165599-10165411, c10164757-10163685)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10178871 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c>10178871-10178651, c10177501-10177409, c10175016-10174905, c10173980-10173919, c10173731-10173402, c10172571-10172504, c10172207-10172133, c10171227-10171167, c10170411-10170276, c10168675-10168540, c10168389-10168261, c10168085-10167935, c10167002-10166891, c10166723-10166635, c10166362-10166240, c10166077-10165952, c10165599-10165411, c10164757-10163685)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c>10168722-10168540, c10168389-10168261, c10168085-10167935, c10167002-10166891, c10166723-10166635, c10166362-10166240, c10166077-10165952, c10165599-10165411, c10164757-10163685)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10168722 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c>10168722-10168540, c10168389-10168261, c10168085-10167935, c10167002-10166891, c10166723-10166635, c10166362-10166240, c10166077-10165952, c10165599-10165411, c10164757-10163685)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10724602 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:10723311-10723538, 10723687-10723822, 10723929-10723985, 10724133-10724231, 10724524-10724602, 10724700-10724871, 10725079-10725217, 10725645-10726573)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10724602 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:10722418-10722635, 10722768-10722885, 10722999-10723067, 10723415-10723538, 10723687-10723822, 10723929-10723985, 10724133-10724231, 10724524-10724602, 10724700-10724871, 10725079-10725217, 10725645-10725826, 10726143-10726573)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11704358 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c11714865-11714823, c11713660-11713503, c11712136-11712001, c11711727-11711654, c11711347-11711159, c11710895-11710832, c11710689-11710420, c11709714-11709526, c11709365-11709210, c11708626-11708551, c11708399-11708243, c11708118-11707987, c11707528-11707343, c11706605-11706383, c11706027-11705884, c11705658-11705427, c11705279-11705158, c11704997-11704773, c11704575-11704358, c11704264-11704168, c11704066-11703703, c11703424-11703264, c11702984-11702782, c11702456-11702253, c11702015-11701871, c11701626-11701419, c11701219-11701084, c11700948-11700778, c11700636-11700483, c11700386-11699599)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11702253 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c11714865-11714823, c11713660-11713503, c11712136-11712001, c11711727-11711654, c11711347-11711159, c11710895-11710832, c11710689-11710420, c11709714-11709526, c11709365-11709210, c11708626-11708551, c11708399-11708243, c11708118-11707987, c11707528-11707343, c11706605-11706383, c11706027-11705884, c11705658-11705427, c11705279-11705158, c11704997-11704773, c11704575-11704358, c11704264-11704168, c11704066-11703703, c11703424-11703264, c11702984-11702782, c11702456-11702253, c11702015-11701871, c11701626-11701419, c11701219-11701084, c11700948-11700778, c11700636-11700483, c11700386-11699599)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13079168 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c13082615-13082493, c13082372-13082250, c13082153-13082002, c13081884-13081713, c13081585-13081384, c13081203-13081084, c13080666-13080542, c13080389-13080103, c13079988-13079910, c13079733-13079479, c13079308-13079168, c13079062-13078883, c13078750-13078634, c13078496-13078386, c13078259-13078182, c13077966-13077789, c13077481-13077351, c13077217-13076921, c13076599-13076459, c13076345-13076241, c13076119-13076000, c13075809-13075615, c13075454-13075203, c13075042-13074873, c13074698-13074467, c13074349-13074101, c13074025-13073862, c13073636-13073519, c13073399-13073298, c13073135-13072962, c13072699-13072550, c13072274-13072094, c13071804-13071672, c13071486-13071352, c13071027-13070941)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13073519 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c13082615-13082493, c13082372-13082250, c13082153-13082002, c13081884-13081713, c13081585-13081384, c13081203-13081084, c13080666-13080542, c13080389-13080103, c13079988-13079910, c13079733-13079479, c13079308-13079168, c13079062-13078883, c13078750-13078634, c13078496-13078386, c13078259-13078182, c13077966-13077789, c13077481-13077351, c13077217-13076921, c13076599-13076459, c13076345-13076241, c13076119-13076000, c13075809-13075615, c13075454-13075203, c13075042-13074873, c13074698-13074467, c13074349-13074101, c13074025-13073862, c13073636-13073519, c13073399-13073298, c13073135-13072962, c13072699-13072550, c13072274-13072094, c13071804-13071672, c13071486-13071352, c13071027-13070941)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13754397 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c13756772-13756719, c13755870-13755826, c13755735-13755634, c13755330-13755227, c13755132-13755044, c13754934-13754864, c13754725-13754596, c13754476-13754397, c13754319-13754215, c13754061-13753748)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13966616 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c13985480-13985355, c13982960-13982860, c13982040-13981880, c13978475-13978355, c13978191-13978080, c13977550-13977471, c13977357-13977294, c13977027-13976881, c13976760-13976733, c13976584-13976344, c13975264-13975142, c13975009-13974842, c13974604-13974496, c13974189-13974047, c13973308-13973120, c13971945-13971852, c13971694-13971600, c13971517-13971337, c13971241-13971137, c13969859-13969730, c13969633-13969497, c13969393-13969224, c13969024-13968868, c13968254-13968145, c13967851-13967644, c13967289-13967165, c13966905-13966788, c13966697-13966616, c13966418-13966309, c13966204-13966079, c13965979-13964617)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14204024 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c14204169-14204024, c14203957-14203487, c14203137-14203096, c14202901-14202843, c14202505-14202256, c14202020-14201886, c14201053-14201010, c14200855-14200777, c14200627-14200496, c14200255-14200160, c14198958-14198887, c14198791-14198767, c14198119-14198083, c14196876-14195296)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14456743 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:14452449-14452695, 14453138-14453199, 14453280-14453352, 14453508-14453574, 14453665-14453702, 14453829-14453954, 14454139-14454278, 14454444-14454491, 14454681-14454828, 14454923-14455018, 14455142-14455200, 14455302-14455382, 14455553-14455618, 14455718-14455883, 14456001-14456135, 14456460-14456568, 14456674-14456743, 14456886-14457180)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14623014 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:14618294-14618436, 14618881-14618983, 14619392-14619533, 14619625-14619741, 14619822-14620153, 14620284-14620395, 14620497-14620616, 14620705-14620821, 14620917-14621054, 14621159-14621236, 14621349-14621414, 14621554-14621823, 14621995-14622240, 14622401-14622537, 14622652-14622730, 14622859-14623014, 14623110-14623202, 14623312-14623553)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14754648 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:14751104-14751244, 14751910-14751987, 14752083-14752164, 14752837-14753008, 14753348-14753521, 14754004-14754079, 14754270-14754389, 14754589-14754648, 14754877-14754915, 14755511-14755592, 14755717-14755882, 14756973-14757132, 14757560-14757633, 14757946-14758419)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16061447 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c16061670-16061447, c16061257-16061178, c16061001-16060666)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16292358 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:16290185-16290366, 16291362-16291466, 16291627-16291749, 16291834-16291890, 16291998-16292141, 16292274-16292358, 16292472-16292532, 16292628-16292718, 16292805-16292863, 16293262-16293310, 16293644-16293739, 16293934-16294000, 16294091-16294122)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16403503 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:16402777-16402888, 16402968-16403098, 16403247-16403307, 16403416-16403503, 16403586-16403667, 16403751-16403877, 16404014-16404094, 16404377-16404515, 16404597-16404697, 16404783-16405290)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17838462 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c17841449-17840640, c17840510-17840370, c17840279-17840078, c17839967-17839734, c17839538-17839407, c17839304-17839196, c17839091-17838972, c17838867-17838703, c17838615-17838462, c17838352-17838249, c17838162-17837968, c17837709-17837581, c17837361-17837090)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c>18296005-18295782, c18295658-18295487, c18293977-18293913, c18293326-18293210, c18290415-18290202, c18289928-18289640, c18289393-18289348, c18287826-18287701)] [lcl|scaffold_2: delta, dna len= 20470143]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18299155 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:c18307364-18307271, c18307088-18307021, c18304088-18304025, c18303641-18303495, c18302375-18302244, c18301314-18301221, c18299193-<18299155)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 20319672 of lcl|scaffold_2 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2:20316314-20316419, 20316553-20316661, 20317054-20317100, 20317212-20317279, 20317468-20317508, 20317945-20318046, 20318186-20318281, 20318499-20318554, 20318638-20318736, 20318838-20318935, 20319016-20319178, 20319593-20319672, 20320532-20320606)] [lcl|scaffold_2: delta, dna len= 20470143]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1395883 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c1419554-1418283, c1417396-1417235, c1416987-1416817, c1416181-1416015, c1415615-1415456, c1415178-1414852, c1414634-1414550, c1414371-1414130, c1413923-1413717, c1412710-1412591, c1412436-1412329, c1411941-1411723, c1411334-1411131, c1410151-1409920, c1409789-1409563, c1408725-1408603, c1408354-1408253, c1407845-1407744, c1407276-1407103, c1406811-1406656, c1405425-1405228, c1404123-1403995, c1402837-1402667, c1401562-1401407, c1400844-1400638, c1399778-1399659, c1398601-1398432, c1398004-1397845, c1396456-1396262, c1396011-1395883, c1395302-1395159, c1394974-1394786, c1393951-1393828, c1393194-1393031, c1392749-1392587, c1392347-1392193, c1392065-1391991, c1391791-1391774, c1389373-1389256, c1388863-1388753, c1387654-1387458, c1387123-1387010, c1386161-1386038, c138588...] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012519-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1457967 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c1471341-1470580, c1468357-1468191, c1467196-1467084, c1466724-1466618, c1466320-1466201, c1464882-1464787, c1464643-1464516, c1462586-1462493, c1462298-1462144, c1461911-1461479, c1461344-1461222, c1461109-1461032, c1460933-1460772, c1460587-1460483, c1460367-1460272, c1460107-1459982, c1459469-1459317, c1459195-1459041, c1458651-1458525, c1458150-1457967, c1457198-1457041, c1456137-1455962, c1455746-1455608, c1455276-1455083, c1454992-1454830, c1454723-1454640, c1454497-1454390, c1454290-1454192, c1453580-1450395, c1447618-1447490, c1446682-1446594, c1446450-1446342, c1445706-1440844, c1440754-1440605, c1440370-1440155, c1440043-1439894, c1439752-1439519, c1438760-1438608, c1438227-1437994, c1437623-1437342, c1437022-1436834, c1436519-1436160, c1435839-1435663, c143386...] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012520-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1435663 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c1471341-1470580, c1468357-1468191, c1467196-1467084, c1466724-1466618, c1466320-1466201, c1464882-1464787, c1464643-1464516, c1462586-1462493, c1462298-1462144, c1461911-1461479, c1461344-1461222, c1461109-1461032, c1460933-1460772, c1460587-1460483, c1460367-1460272, c1460107-1459982, c1459469-1459317, c1459195-1459041, c1458651-1458525, c1458150-1457967, c1457198-1457041, c1456137-1455962, c1455746-1455608, c1455276-1455083, c1454992-1454830, c1454723-1454640, c1454497-1454390, c1454290-1454192, c1453580-1450395, c1447618-1447490, c1446682-1446594, c1446450-1446342, c1445706-1440844, c1440754-1440605, c1440370-1440155, c1440043-1439894, c1439752-1439519, c1438760-1438608, c1438227-1437994, c1437623-1437342, c1437022-1436834, c1436519-1436160, c1435839-1435663, c143386...] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012520-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:1510676-1510678, 1510909-1510918, 1511201-1511259, 1511514-1511597, 1512904-1513017, 1513420-1513531, 1513877-1514027, 1514212-1514338, 1515143-1515305, 1515655-1515802, 1515978-1517731, 1517992-1518045, 1518183-1518260, 1519227-1519267)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012525-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1517731 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:1510676-1510678, 1510909-1510918, 1511201-1511259, 1511514-1511597, 1512904-1513017, 1513420-1513531, 1513877-1514027, 1514212-1514338, 1515143-1515305, 1515655-1515802, 1515978-1517731, 1517992-1518045, 1518183-1518260, 1519227-1519267)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012525-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:2153467-2153490, 2154033-2154046, 2155502-2155545, 2155760-2155814, 2156005-2156128, 2156598-2156873, 2157422-2157502, 2158397-2158537, 2158917-2158979, 2159902-2159934)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012590-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:2164736-2164773, 2164862-2164897, 2166227-2166233, 2166392-2166445, 2166827-2167041, 2167293-2167494)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012591-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2742613 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:2738657-2738809, 2739607-2739667, 2739774-2739865, 2740077-2740211, 2740328-2740381, 2740500-2740674, 2740999-2741060, 2741574-2741757, 2742056-2742155, 2742336-2742429, 2742542-2742613, 2743356-2743464, 2743752-2743810, 2743907-2744010, 2744102-2744175, 2744427-2744512, 2744689-2744741, 2744852-2744882, 2745023-2745064)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012647-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2743356 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:2738657-2738809, 2739607-2739667, 2739774-2739865, 2740077-2740211, 2740328-2740381, 2740500-2740674, 2740999-2741060, 2741574-2741757, 2742056-2742155, 2742336-2742429, 2742542-2742613, 2743356-2743464, 2743752-2743810, 2743907-2744010, 2744102-2744175, 2744427-2744512, 2744689-2744741, 2744852-2744882, 2745023-2745064)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012647-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2787509 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c2789901-2789695, c2789509-2789366, c2789281-2789125, c2789043-2789016, c2788923-2788812, c2788727-2788635, c2788537-2788474, c2788399-2788301, c2788048-2787945, c2787859-2787721, c2787627-2787509, c2787408-2787259, c2787158-2786988, c2786860-2786560, c2786462-2786392, c2786310-2786223, c2786088-2785971, c2785768-2785645, c2785534-2785398, c2785273-2785018, c2784912-2784670, c2784573-2784397, c2784305-2784160, c2784075-2783985, c2783870-2783481, c2783379-2783253, c2783157-2783039, c2782933-2782737, c2782650-2782467, c2782367-2782202, c2782078-2781954, c2781834-2781526, c2781452-2781249, c2781158-2781033, c2780947-2780777, c2780686-2780582, c2780511-2780416, c2780323-2780192, c2780007-2779990)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012655-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2959925 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c2959991-2959925, c2958197-2958083, c2957936-2957827, c2957686-2957538)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012673-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:4391860-4391930, 4392465-4392468, 4392704-4392800, 4392897-4393029, 4393359-4393383)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012821-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:4958249-4958267, 4958841-4959177, 4959415-4959532, 4959678-4959777, 4959869-4959951, 4960011-4960018, 4960336-4960459)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012867-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5235518 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:5227966-5228077, 5228266-5228441, 5228705-5228854, 5229617-5229649, 5229911-5229937, 5230376-5230572, 5230731-5230857, 5231100-5231219, 5232240-5232429, 5232574-5232715, 5232874-5233029, 5233256-5233481, 5233834-5233947, 5234329-5234495, 5235308-5235518, 5236726-5236809, 5236945-5237133, 5237321-5237512, 5237762-5237974, 5238345-5238480, 5238705-5238793, 5238912-5239058, 5239161-5239281, 5239358-5239543, 5239816-5240021, 5240417-5240473)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012890-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5315068 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:5314861-5315068, 5315436-5315615, 5316139-5316197, 5316348-5316488, 5316618-5316782, 5317132-5317227)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012897-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c5521357-5521318, c5521132-5521120, c5520902-5520831, c5520118-5520047, c5519961-5519890, c5519166-5519095, c5518515-5518346, c5518021-5517857, c5517760-5516943)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012913-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:5901107-5901179, 5901580-5901694, 5902766-5902871, 5903445-5903556, 5903660-5903800, 5904256-5904474, 5905182-5905318, 5906216-5906278, 5906468-5906477, 5907334-5907465, 5908014-5908146, 5908496-5908520)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012952-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:6165585-6165616, 6165799-6165862, 6166513-6166524, 6166625-6166762, 6167239-6167397, 6170619-6170684)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_012984-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6901136 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:6898204-6898350, 6898959-6899145, 6899265-6899358, 6899669-6899901, 6900136-6900194, 6900760-6900920, 6901050-6901136, 6901228-6901338, 6901440-6901563, 6901652-6901804, 6901951-6902099, 6902189-6902285, 6902939-6902971, 6903087-6903186, 6903381-6903469, 6903723-6903751, 6903885-6903958, 6904046-6904134, 6904507-6904598, 6904758-6904794)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013065-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:7195373-7195583, 7198471-7198652, 7200590-7200727, 7202846-7202897, 7202977-7203086, 7203783-7203976, 7204106-7204217, 7205456-7205468, 7205982-7206211, 7206864-7207030, 7207371-7207429, 7207583-7209208, 7209890-7210039, 7210808-7211033, 7211274-7211434, 7211541-7211672, 7211947-7212078, 7212339-7212505, 7213002-7213135, 7213435-7213627)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013098-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7459284 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:7459011-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7467790)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013127-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7461062 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:7459011-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7467790)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013127-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7459284 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:7459011-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7467751, 7469177-7469213, 7469332-7469481, 7469580-7469944, 7471004-7471012)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013127-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7461062 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:7459011-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7467751, 7469177-7469213, 7469332-7469481, 7469580-7469944, 7471004-7471012)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013127-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c7723317-7723273, c7722137-7722123, c7721787-7721689, c7720078-7719918, c7718473-7718349, c7718191-7718046, c7717491-7717359, c7717063-7716876, c7715156-7715046, c7714820-7714719, c7714599-7714524, c7713749-7713622, c7712779-7712525)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013156-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7788247 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c7789783-7789675, c7789422-7789284, c7789091-7788935, c7788825-7788780, c7788576-7788538, c7788335-7788247, c7787992-7787977, c7787800-7787733, c7787594-7787490, c7787350-7787246)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013166-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7793522 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c7793554-7793522, c7792862-7792718, c7792643-7792495, c7792293-7792164, c7791294-7791178, c7790965-7790919)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013167-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c8788293-8788191, c8787339-8787095, c8786535-8786466, c8786130-8786012, c8785916-8785783, c8785670-8785502, c8785302-8785219, c8785141-8785056, c8784275-8784115, c8784019-8783850, c8783746-8783735, c8783630-8783415)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013278-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:8791403-8791648, 8792262-8792331, 8792505-8792623, 8792743-8792876, 8793048-8793216, 8793320-8793403, 8793492-8793577, 8793704-8793778, 8793911-8794071, 8794284-8794453, 8794602-8794613, 8794744-8794955, 8795095-8795134, 8795244-8795309, 8795424-8795481, 8795611-8795675, 8795758-8795826, 8795943-8796021, 8796120-8796233, 8796355-8796410, 8796512-8796538)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013279-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9006302 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c9006326-9006302, c9004070-9003981, c9003101-9003043)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013301-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c9564971-9564888, c9564587-9564492, c9564382-9564263, c9564098-9563980, c9563845-9563831, c9563550-9563370)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013340-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9869587 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9861200, c9860357-9859982, c9859837-9859697, c9859331-9859167, c9859047-9858884, c9858783-9858690, c9858479-9858405, c9858311-9858201, c9858012-9857895, c9857721-9857588, c9857450-9857359, c9857252-9857033)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013381-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9865524 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9861200, c9860357-9859982, c9859837-9859697, c9859331-9859167, c9859047-9858884, c9858783-9858690, c9858479-9858405, c9858311-9858201, c9858012-9857895, c9857721-9857588, c9857450-9857359, c9857252-9857033)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013381-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9869587 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9861181)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013381-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9865524 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9861181)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013381-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10910964 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c10911081-10910964, c10910942-10910086)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013480-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11767987 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:11767241-11767302, 11767451-11767482, 11767637-11767716, 11767904-11767987, 11768121-11768276, 11768393-11768509)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013550-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12346464 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:12345058-12345118, 12345669-12345754, 12345900-12346040, 12346163-12346204, 12346375-12346464, 12346578-12346707, 12346815-12346954, 12347066-12347163, 12347254-12347426, 12347559-12347682, 12347789-12347906, 12348007-12348172, 12348384-12348517, 12349093-12349257, 12349349-12349437, 12349591-12349717)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013607-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12346578 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:12345058-12345118, 12345669-12345754, 12345900-12346040, 12346163-12346204, 12346375-12346464, 12346578-12346707, 12346815-12346954, 12347066-12347163, 12347254-12347426, 12347559-12347682, 12347789-12347906, 12348007-12348172, 12348384-12348517, 12349093-12349257, 12349349-12349437, 12349591-12349717)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013607-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12402674 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c12404160-12404052, c12403830-12403704, c12403478-12403376, c12403267-12403172, c12402973-12402871, c12402763-12402674, c12402577-12402439, c12402285-12402243)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013614-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12479981 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:12479239-12479521, 12479709-12479786, 12479874-12479981, 12480080-12480194, 12480351-12480519, 12480651-12480762, 12480922-12480999, 12481306-12481397, 12481513-12481693, 12481789-12481882, 12482037-12482256, 12482466-12482546, 12482637-12482813, 12483307-12483455, 12483653-12484031)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013628-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13213392 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:13207611-13207706, 13207806-13207925, 13208072-13208210, 13208644-13208828, 13208919-13208970, 13209081-13209290, 13209502-13209613, 13209712-13209783, 13209882-13210028, 13210156-13210318, 13210426-13210710, 13210857-13210996, 13211114-13211219, 13211450-13211675, 13211793-13211854, 13212039-13212158, 13212353-13212500, 13213101-13213392, 13213477-13214784, 13214950-13215088, 13215199-13215370, 13215521-13215646, 13215744-13215874, 13215990-13216145, 13216372-13216575)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013714-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:<13610065-13610150, 13610253-13610370, 13611802-13611879, 13612018-13612085, 13612356-13612494, 13613560-13613646, 13614094-13614189, 13614494-13614695, 13615079-13615213, 13615475-13615593)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013760-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13610065 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:<13610065-13610150, 13610253-13610370, 13611802-13611879, 13612018-13612085, 13612356-13612494, 13613560-13613646, 13614094-13614189, 13614494-13614695, 13615079-13615213, 13615475-13615593)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013760-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c13877504-13876814, c13874148-13874073, c13873428-13873346, c13873261-13871720, c13871493-13871483, c13869479-13869321)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013778-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c13889591-13889448, c13889336-13889331, c13889289-13889098, c13889013-13888984)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013780-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13950372 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:13947320-13947438, 13947834-13947894, 13948008-13948082, 13948392-13948497, 13948600-13948649, 13948772-13948835, 13949142-13949189, 13949299-13949412, 13949596-13949782, 13949876-13949927, 13950113-13950170, 13950276-13950372, 13950494-13950596, 13950868-13950938, 13951028-13951064, 13951181-13951247, 13951355-13951444, 13951624-13951677, 13951791-13951900, 13952005-13952076, 13952163-13952226, 13952319-13952402, 13952513-13952596, 13952775-13952881, 13953015-13953070, 13953150-13953228, 13953389-13953436, 13953520-13953675)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013785-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15228656 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:15222256-15222294, 15224188-15224294, 15226833-15227057, 15227330-15227484, 15227824-15228035, 15228449-15228656, 15228994-15229090, 15230314-15230542, 15230703-15230828, 15231032-15231154, 15231681-15231707, 15232520-15232601, 15232778-15232800)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013872-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c15755183-15755083, c15754781-15754688, c15754450-15754436, c15753879-15753868)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013928-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c16126748-16126668, c16125290-16125236, c16124687-16123861, c16123138-16123098, c16122767-16122755, c16122011-16121916, c16121771-16121652, c16117671-16117318)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_013958-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16811395 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:16810607-16810693, 16811106-16811164, 16811335-16811395, 16811787-16811843, 16812010-16812107, 16812685-16812781, 16812871-16812939, 16813362-16813512, 16813690-16813773, 16814244-16814289, 16814612-16814693, 16815663-16815779, 16816128-16816199, 16816325-16816360)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014007-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c17762947-17762875, c17762278-17762200, c17760633-17760463, c17760129-17759997, c17759436-17759429, c17759315-17759177, c17758196-17758112, c17757692-17757582, c17756367-17756023, c17755313-17755170, c17754719-17754583, c17754474-17754299, c17753971-17753956, c17753714-17753668, c17753578-17753457, c17752363-17752196, c17751794-17751742, c17751662-17751599, c17751285-17751184, c17750784-17750698, c17749999-17749842, c17748820-17748737)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014094-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17974962 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c17980766-17980761, c17979167-17979057, c17976620-17976555, c17975838-17975748, c17975041-17974962, c17974813-17974722, c17972009-17971868, c17968973-17968882, c17968653-17968617)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014109-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c18023814-18023682, c18023637-18023504, c18020917-18020912, c18020685-18020626)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014113-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18360683 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c18365623-18365529, c18365063-18364967, c18364217-18364068, c18363815-18363666, c18363067-18362811, c18360821-18360683, c18360628-18360557, c18360367-18360176, c18359834-18359682, c18358674-18358457, c18358301-18358118, c18357686-18357531, c18357405-18356863, c18353481-18351841, c18351635-18351138, c18351034-18350918, c18350737-18350660, c18349883-18349797, c18348907-18348816, c18347735-18347650, c18347421-18347358, c18347241-18347072, c18346945-18346727, c18346619-18346372)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014146-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18601936 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c18602309-18602238, c18602137-18601936, c18601853-18601712, c18601507-18601392, c18601009-18600899, c18600735-18600662, c18600583-18600374)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014174-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c18633589-18633578, c18633413-18633258, c18633038-18632994, c18632886-18632771, c18632736-18632607, c18631815-18631805, c18631773-18631697, c18631598-18631479, c18630869-18630765, c18629831-18629784, c18629344-18629174, c18628149-18628064, c18627641-18627473, c18627274-18627207, c18626736-18626676, c18625875-18625868, c18623795-18623715, c18623482-18623369)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014178-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18981320 of lcl|scaffold_7 FEATURE: CDS: hypothetical protein [(lcl|scaffold_7:c18989069-18988984, c18987095-18986984, c18985555-18985402, c18985280-18985107, c18983741-18983540, c18981982-18981817, c18981422-18981320, c18981157-18980959, c18980821-18980721, c18977755-<18977582)] [lcl|scaffold_7: delta, dna len= 19028566] -> [gnl|ncbi|FUN_014206-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 289520 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:276333-276914, 277974-278042, 279672-279824, 280392-280490, 280738-280961, 281143-281237, 281856-281908, 282917-283066, 283141-283242, 283505-283593, 283679-283815, 284127-284219, 284938-285065, 285654-285806, 285907-285999, 286101-286340, 286432-286467, 286578-286694, 287529-287627, 287991-288119, 288276-289520, 289548-291173)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1395883 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c1419554-1418283, c1417396-1417235, c1416987-1416817, c1416181-1416015, c1415615-1415456, c1415178-1414852, c1414634-1414550, c1414371-1414130, c1413923-1413717, c1412710-1412591, c1412436-1412329, c1411941-1411723, c1411334-1411131, c1410151-1409920, c1409789-1409563, c1408725-1408603, c1408354-1408253, c1407845-1407744, c1407276-1407103, c1406811-1406656, c1405425-1405228, c1404123-1403995, c1402837-1402667, c1401562-1401407, c1400844-1400638, c1399778-1399659, c1398601-1398432, c1398004-1397845, c1396456-1396262, c1396011-1395883, c1395302-1395159, c1394974-1394786, c1393951-1393828, c1393194-1393031, c1392749-1392587, c1392347-1392193, c1392065-1391991, c1391791-1391774, c1389373-1389256, c1388863-1388753, c1387654-1387458, c1387123-1387010, c1386161-1386038, c138588...] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1457967 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c1471341-1470580, c1468357-1468191, c1467196-1467084, c1466724-1466618, c1466320-1466201, c1464882-1464787, c1464643-1464516, c1462586-1462493, c1462298-1462144, c1461911-1461479, c1461344-1461222, c1461109-1461032, c1460933-1460772, c1460587-1460483, c1460367-1460272, c1460107-1459982, c1459469-1459317, c1459195-1459041, c1458651-1458525, c1458150-1457967, c1457198-1457041, c1456137-1455962, c1455746-1455608, c1455276-1455083, c1454992-1454830, c1454723-1454640, c1454497-1454390, c1454290-1454192, c1453580-1450395, c1447618-1447490, c1446682-1446594, c1446450-1446342, c1445706-1440844, c1440754-1440605, c1440370-1440155, c1440043-1439894, c1439752-1439519, c1438760-1438608, c1438227-1437994, c1437623-1437342, c1437022-1436834, c1436519-1436160, c1435839-1435663, c143386...] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1435663 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c1471341-1470580, c1468357-1468191, c1467196-1467084, c1466724-1466618, c1466320-1466201, c1464882-1464787, c1464643-1464516, c1462586-1462493, c1462298-1462144, c1461911-1461479, c1461344-1461222, c1461109-1461032, c1460933-1460772, c1460587-1460483, c1460367-1460272, c1460107-1459982, c1459469-1459317, c1459195-1459041, c1458651-1458525, c1458150-1457967, c1457198-1457041, c1456137-1455962, c1455746-1455608, c1455276-1455083, c1454992-1454830, c1454723-1454640, c1454497-1454390, c1454290-1454192, c1453580-1450395, c1447618-1447490, c1446682-1446594, c1446450-1446342, c1445706-1440844, c1440754-1440605, c1440370-1440155, c1440043-1439894, c1439752-1439519, c1438760-1438608, c1438227-1437994, c1437623-1437342, c1437022-1436834, c1436519-1436160, c1435839-1435663, c143386...] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1517731 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:1510676-1510678, 1510909-1510918, 1511201-1511259, 1511514-1511597, 1512904-1513017, 1513420-1513531, 1513877-1514027, 1514212-1514338, 1515143-1515305, 1515655-1515802, 1515978-1517731, 1517992-1518045, 1518183-1518260, 1519227-1519415)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2742613 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:2738642-2738809, 2739607-2739667, 2739774-2739865, 2740077-2740211, 2740328-2740381, 2740500-2740674, 2740999-2741060, 2741574-2741757, 2742056-2742155, 2742336-2742429, 2742542-2742613, 2743356-2743464, 2743752-2743810, 2743907-2744010, 2744102-2744175, 2744427-2744512, 2744689-2744741, 2744852-2744882, 2745023-2745868)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2743356 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:2738642-2738809, 2739607-2739667, 2739774-2739865, 2740077-2740211, 2740328-2740381, 2740500-2740674, 2740999-2741060, 2741574-2741757, 2742056-2742155, 2742336-2742429, 2742542-2742613, 2743356-2743464, 2743752-2743810, 2743907-2744010, 2744102-2744175, 2744427-2744512, 2744689-2744741, 2744852-2744882, 2745023-2745868)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2787509 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c2790048-2790010, c2789922-2789695, c2789509-2789366, c2789281-2789125, c2789043-2789016, c2788923-2788812, c2788727-2788635, c2788537-2788474, c2788399-2788301, c2788048-2787945, c2787859-2787721, c2787627-2787509, c2787408-2787259, c2787158-2786988, c2786860-2786560, c2786462-2786392, c2786310-2786223, c2786088-2785971, c2785768-2785645, c2785534-2785398, c2785273-2785018, c2784912-2784670, c2784573-2784397, c2784305-2784160, c2784075-2783985, c2783870-2783481, c2783379-2783253, c2783157-2783039, c2782933-2782737, c2782650-2782467, c2782367-2782202, c2782078-2781954, c2781834-2781526, c2781452-2781249, c2781158-2781033, c2780947-2780777, c2780686-2780582, c2780511-2780416, c2780323-2780192, c2780007-2779892)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2959925 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c2959991-2959925, c2958197-2958083, c2957936-2957827, c2957686-2957538)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4044556 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c4044640-4044556, c4044420-4044253, c4044167-4043793, c4043701-4043511, c4043304-4043186, c4041263-4041153, c4040929-4040825, c4040670-4039795)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5235518 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:5227146-5227168, 5227941-5228077, 5228266-5228441, 5228705-5228854, 5229617-5229649, 5229911-5229937, 5230376-5230572, 5230731-5230857, 5231100-5231219, 5232240-5232429, 5232574-5232715, 5232874-5233029, 5233256-5233481, 5233834-5233947, 5234329-5234495, 5235308-5235518, 5236726-5236809, 5236945-5237133, 5237321-5237512, 5237762-5237974, 5238345-5238480, 5238705-5238793, 5238912-5239058, 5239161-5239281, 5239358-5239543, 5239816-5240021, 5240417-5241407)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5315068 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:5314861-5315068, 5315436-5315615, 5316139-5316197, 5316348-5316488, 5316618-5316782, 5317132-5317227)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6901136 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:6897411-6897654, 6898202-6898350, 6898959-6899145, 6899265-6899358, 6899669-6899901, 6900136-6900194, 6900760-6900920, 6901050-6901136, 6901228-6901338, 6901440-6901563, 6901652-6901804, 6901951-6902099, 6902189-6902285, 6902939-6902971, 6903087-6903186, 6903381-6903469, 6903723-6903751, 6903885-6903958, 6904046-6904134, 6904507-6904598, 6904758-6904852)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7459284 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:7458879-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7468094)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7461062 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:7458879-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7468094)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7459284 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:7458879-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7467751, 7469177-7469213, 7469332-7469481, 7469580-7469944, 7471004-7472076, 7472097-7472463)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7461062 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:7458879-7459080, 7459182-7459284, 7461062-7461124, 7462161-7462292, 7463130-7463277, 7463644-7463817, 7464591-7464707, 7465212-7465487, 7465728-7465808, 7465967-7466080, 7466396-7466511, 7467604-7467751, 7469177-7469213, 7469332-7469481, 7469580-7469944, 7471004-7472076, 7472097-7472463)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7788247 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c7790161-7790044, c7789805-7789675, c7789422-7789284, c7789091-7788935, c7788825-7788780, c7788576-7788538, c7788335-7788247, c7787992-7787977, c7787800-7787733, c7787594-7787490, c7787350-7787028)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7793522 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c7793569-7793522, c7792862-7792718, c7792643-7792495, c7792293-7792164, c7791294-7791178, c7790965-7790919)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9006302 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c9006361-9006302, c9004070-9003981, c9003101-9003003)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9869587 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9861200, c9860357-9859982, c9859837-9859697, c9859331-9859167, c9859047-9858884, c9858783-9858690, c9858479-9858405, c9858311-9858201, c9858012-9857895, c9857721-9857588, c9857450-9857359, c9857252-9855945)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9865524 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9861200, c9860357-9859982, c9859837-9859697, c9859331-9859167, c9859047-9858884, c9858783-9858690, c9858479-9858405, c9858311-9858201, c9858012-9857895, c9857721-9857588, c9857450-9857359, c9857252-9855945)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9869587 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9860667)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9865524 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c9873499-9872839, c9871641-9871487, c9871338-9870748, c9870331-9870190, c9869777-9869587, c9869291-9868877, c9868774-9868585, c9868442-9868241, c9868082-9867892, c9867689-9867493, c9867394-9867157, c9867054-9866949, c9866851-9866624, c9866469-9866379, c9866222-9866051, c9865811-9865706, c9865619-9865524, c9865391-9865216, c9865076-9864943, c9864827-9864642, c9864325-9864296, c9863999-9863863, c9863608-9863426, c9863255-9863098, c9862991-9862790, c9862612-9862441, c9862326-9862181, c9862082-9861953, c9861797-9861598, c9861462-9860667)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10910964 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c10911781-10911646, c10911180-10910964, c10910942-10909753)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11767987 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:11766994-11767015, 11767110-11767140, 11767227-11767302, 11767451-11767482, 11767637-11767716, 11767904-11767987, 11768121-11768276, 11768393-11768714)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12346464 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:12344962-12345118, 12345669-12345754, 12345900-12346040, 12346163-12346204, 12346375-12346464, 12346578-12346707, 12346815-12346954, 12347066-12347163, 12347254-12347426, 12347559-12347682, 12347789-12347906, 12348007-12348172, 12348384-12348517, 12349093-12349257, 12349349-12349437, 12349591-12349951)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12346578 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:12344962-12345118, 12345669-12345754, 12345900-12346040, 12346163-12346204, 12346375-12346464, 12346578-12346707, 12346815-12346954, 12347066-12347163, 12347254-12347426, 12347559-12347682, 12347789-12347906, 12348007-12348172, 12348384-12348517, 12349093-12349257, 12349349-12349437, 12349591-12349951)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12402674 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c12404160-12404052, c12403830-12403704, c12403478-12403376, c12403267-12403172, c12402973-12402871, c12402763-12402674, c12402577-12402439, c12402285-12402243)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12479981 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:12479116-12479521, 12479709-12479786, 12479874-12479981, 12480080-12480194, 12480351-12480519, 12480651-12480762, 12480922-12480999, 12481306-12481397, 12481513-12481693, 12481789-12481882, 12482037-12482256, 12482466-12482546, 12482637-12482813, 12483307-12483455, 12483653-12484284)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13213392 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:13207611-13207706, 13207806-13207925, 13208072-13208210, 13208644-13208828, 13208919-13208970, 13209081-13209290, 13209502-13209613, 13209712-13209783, 13209882-13210028, 13210156-13210318, 13210426-13210710, 13210857-13210996, 13211114-13211219, 13211450-13211675, 13211793-13211854, 13212039-13212158, 13212353-13212500, 13213101-13213392, 13213477-13214784, 13214950-13215088, 13215199-13215370, 13215521-13215646, 13215744-13215874, 13215990-13216145, 13216372-13216575)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:<13610064-13610150, 13610253-13610370, 13611802-13611879, 13612018-13612085, 13612356-13612494, 13613560-13613646, 13614094-13614189, 13614494-13614695, 13615079-13615213, 13615475-13615923)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13950372 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:13947242-13947438, 13947834-13947894, 13948008-13948082, 13948392-13948497, 13948600-13948649, 13948772-13948835, 13949142-13949189, 13949299-13949412, 13949596-13949782, 13949876-13949927, 13950113-13950170, 13950276-13950372, 13950494-13950596, 13950868-13950938, 13951028-13951064, 13951181-13951247, 13951355-13951444, 13951624-13951677, 13951791-13951900, 13952005-13952076, 13952163-13952226, 13952319-13952402, 13952513-13952596, 13952775-13952881, 13953015-13953070, 13953150-13953228, 13953389-13953436, 13953520-13953932)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15228656 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:15222211-15222294, 15224188-15224294, 15226833-15227057, 15227330-15227484, 15227824-15228035, 15228449-15228656, 15228994-15229090, 15230314-15230542, 15230703-15230828, 15231032-15231154, 15231681-15231707, 15232520-15232601, 15232778-15233246)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16811395 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:16810470-16810693, 16811106-16811164, 16811335-16811395, 16811787-16811843, 16812010-16812107, 16812685-16812781, 16812871-16812939, 16813362-16813512, 16813690-16813773, 16814244-16814289, 16814612-16814693, 16815663-16815779, 16816128-16816199, 16816325-16816971)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17974962 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c17980766-17980761, c17979167-17979057, c17976620-17976555, c17975838-17975748, c17975041-17974962, c17974813-17974722, c17972009-17971868, c17968973-17968882, c17968653-17968617)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18360683 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c18365623-18365529, c18365063-18364967, c18364217-18364068, c18363815-18363666, c18363067-18362811, c18360821-18360683, c18360628-18360557, c18360367-18360176, c18359834-18359682, c18358674-18358457, c18358301-18358118, c18357686-18357531, c18357405-18356863, c18353481-18351841, c18351635-18351138, c18351034-18350918, c18350737-18350660, c18349883-18349797, c18348907-18348816, c18347735-18347650, c18347421-18347358, c18347241-18347072, c18346945-18346727, c18346619-18346372)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18394917 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c18394963-18394917, c18394767-18394647, c18392944-18392764)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18601936 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c18602732-18602627, c18602334-18602238, c18602137-18601936, c18601853-18601712, c18601507-18601392, c18601009-18600899, c18600735-18600662, c18600583-18600142)] [lcl|scaffold_7: delta, dna len= 19028566]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18981320 of lcl|scaffold_7 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_7:c18989159-18988984, c18987095-18986984, c18985555-18985402, c18985280-18985107, c18983741-18983540, c18981982-18981817, c18981422-18981320, c18981157-18980959, c18980821-18980721, c18977755-<18977582)] [lcl|scaffold_7: delta, dna len= 19028566]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:143856-143925, 144082-144243, 144499-144508, 144772-144803, 145214-145249, 145727-145833, 145966-146053, 146804-146907, 147413-147514, 147595-147783)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021299-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1228608 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:1222901-1225753, 1228517-1228608, 1230106-1230298)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021382-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2752057 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c2760234-2760193, c2759923-2759748, c2759545-2759359, c2759187-2759115, c2759014-2758901, c2758704-2758574, c2758279-2758195, c2757975-2757873, c2757483-2757291, c2756741-2756602, c2756205-2756172, c2756053-2755914, c2755595-2755431, c2755229-2755120, c2755015-2754912, c2754569-2754446, c2754292-2754165, c2752556-2752322, c2752163-2752057, c2751916-2751693, c2751417-2751213, c2751069-2750956, c2750650-2750517, c2750384-2750333)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021503-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:3094072-3094221, 3094414-3094566, 3094699-3094780, 3095026-3095106, 3095389-3095474, 3095735-3095925, 3096170-3096293, 3096581-3096674, 3096892-3097122, 3097346-3097516, 3097628-3097712, 3097853-3098032, 3098248-3098354, 3098464-3098567, 3099140-3099247, 3099382-3099455, 3099827-3099905, 3100141-3100220, 3100346-3100483, 3100740-3100825, 3101129-3101277, 3101515-3101638, 3102046-3102143, 3102677-3102878, 3103269-3103330, 3103802-3103808, 3104497-3104645, 3106017-3106092, 3106231-3106295)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021535-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3101277 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:3094072-3094221, 3094414-3094566, 3094699-3094780, 3095026-3095106, 3095389-3095474, 3095735-3095925, 3096170-3096293, 3096581-3096674, 3096892-3097122, 3097346-3097516, 3097628-3097712, 3097853-3098032, 3098248-3098354, 3098464-3098567, 3099140-3099247, 3099382-3099455, 3099827-3099905, 3100141-3100220, 3100346-3100483, 3100740-3100825, 3101129-3101277, 3101515-3101638, 3102046-3102143, 3102677-3102878, 3103269-3103330, 3103802-3103808, 3104497-3104645, 3106017-3106092, 3106231-3106295)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021535-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3963174 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:3963049-3963174, 3964004-3964109, 3964452-3964604, 3964732-3964803, 3965003-3965108, 3965301-3965343, 3965894-3965980, 3966543-3966623, 3966983-3967033)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021616-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4426048 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:4422137-4422191, 4422976-4423317, 4423567-4423695, 4423841-4424005, 4425014-4425076, 4425565-4425666, 4425975-4426048, 4426113-4426236, 4426503-4426533, 4426783-4426843)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021688-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c4734896-4734773, c4734427-4734413, c4732870-4732818, c4732632-4732527, c4732436-4732219, c4731864-4731727, c4731102-4730887, c4729660-4729586, c4729457-4729359, c4729091-4728985, c4728702-4728402, c4728381-4728286, c4728054-4727959, c4727761-4727638, c4727512-4727440, c4727129-4727105)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021709-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5373627 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c5374688-5374509, c5373783-5373627, c5373480-5373276, c5372886-5372725, c5372322-5372222, c5371889-5371726)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021766-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c5706330-5706319, c5706122-5705984, c5705646-5705564, c5705189-5705177, c5704976-5704826, c5704738-5704687, c5704510-5704361)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021796-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c6952041-6951848, c6951562-6951556, c6950746-6950549)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021862-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7096210 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:7096072-7096210, 7096777-7096924, 7097059-7097215, 7097841-7097969, 7098140-7098259, 7098467-7098570, 7098700-7098846, 7098972-7099091, 7099272-7099349, 7100131-7100170, 7100359-7100525, 7100748-7101368, 7101530-7101686)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021876-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7096777 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:7096072-7096210, 7096777-7096924, 7097059-7097215, 7097841-7097969, 7098140-7098259, 7098467-7098570, 7098700-7098846, 7098972-7099091, 7099272-7099349, 7100131-7100170, 7100359-7100525, 7100748-7101368, 7101530-7101686)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021876-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7109934 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:7102935-7102976, 7103141-7103255, 7103846-7104058, 7104536-7104718, 7104938-7105041, 7105133-7105253, 7105454-7105745, 7105949-7106114, 7106273-7106360, 7106504-7106721, 7106983-7107133, 7107406-7107615, 7107854-7108925, 7109275-7109440, 7109731-7109934, 7110072-7110300, 7110527-7110709, 7110837-7110953, 7111068-7111139, 7111238-7111323, 7111468-7111629, 7111763-7111907, 7112066-7112217, 7113160-7113342, 7113607-7113762)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_021877-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9091313 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c9100824-9100576, c9099334-9099187, c9097552-9097521, c9097328-9097250, c9095495-9095448, c9095326-9095244, c9095138-9095067, c9094360-9094319, c9091404-9091313, c9091080-9090909, c9089464-9089356, c9089229-9089072, c9088275-9088207)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022123-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c>9160103-9160061, c9159223-9159094, c9158875-9158695, c9158607-9158503, c9158386-9158333, c9158214-9158007, c9157899-9157713, c9157476-9157190, c9156985-9156978)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022131-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9160103 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c>9160103-9160061, c9159223-9159094, c9158875-9158695, c9158607-9158503, c9158386-9158333, c9158214-9158007, c9157899-9157713, c9157476-9157190, c9156985-9156978)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022131-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10514093 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c10524259-10524237, c10523122-10523031, c10522589-10522551, c10522041-10521928, c10520928-10520734, c10520443-10520191, c10520034-10519867, c10519668-10519567, c10519439-10519325, c10519098-10518982, c10518872-10518691, c10518486-10518375, c10518183-10518074, c10517857-10517722, c10517630-10517520, c10517169-10517004, c10516850-10516615, c10515644-10515621, c10514212-10514093, c10513952-10513868, c10513567-10513440, c10513323-10513212, c10513022-10512898)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022281-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10545998 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:10545196-10545361, 10545565-10545680, 10545895-10545998, 10546134-10546203, 10546329-10546402, 10546524-10546686, 10546987-10547076, 10547604-10547686, 10547772-10547839, 10548002-10548120, 10548243-10548435, 10548594-10548698, 10548797-10548907, 10548988-10549073, 10549201-10549308, 10549413-10549526, 10549647-10549752, 10550056-10550228, 10550310-10550462, 10550696-10550791)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022286-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10546134 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:10545196-10545361, 10545565-10545680, 10545895-10545998, 10546134-10546203, 10546329-10546402, 10546524-10546686, 10546987-10547076, 10547604-10547686, 10547772-10547839, 10548002-10548120, 10548243-10548435, 10548594-10548698, 10548797-10548907, 10548988-10549073, 10549201-10549308, 10549413-10549526, 10549647-10549752, 10550056-10550228, 10550310-10550462, 10550696-10550791)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022286-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11345401 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c11351306-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022357-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11345211 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c11351306-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022357-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11342615 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c11351306-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022357-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11335087 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c11351306-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022357-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c12057055-12056777, c12056346-12056251, c12055927-12055694, c12055483-12055470, c12055311-12055196, c12054988-12054429)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022408-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:13428739-13428801, 13428946-13428982, 13432329-13432455, 13432880-13432973, 13435839-13435926, 13436041-13436099, 13436235-13436306, 13437464-13437625, 13437899-13437928, 13438166-13438295, 13439619-13439669, 13442925-13443059, 13443260-13443330, 13443664-13443832, 13446062-13446120, 13446280-13446340, 13446482-13446489, 13446610-13446690, 13446723-13446812, 13446875-13446988)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022552-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:14001911-14001914, 14002277-14002399, 14003305-14003510, 14003662-14003857, 14004849-14004950, 14005016-14005025, 14005200-14005372, 14006911-14007111, 14008315-14008500, 14009260-14009283, 14009969-14010028, 14010670-14010705, 14011838-14011984, 14012250-14012460, 14012682-14012801, 14013162-14013423, 14013890-14014157, 14015424-14015567, 14016507-14016756, 14017804-14018033, 14019543-14019697, 14019887-14019988, 14020113-14020286, 14020426-14021066, 14022346-14022521, 14023901-14024136, 14024431-14024727, 14024925-14025482, 14026188-14026457, 14026892-14027302, 14027436-14027546, 14027765-14028032, 14028230-14028360, 14028909-14029646)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022598-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14283346 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:14282720-14282803, 14282968-14283103, 14283222-14283346, 14283508-14283553, 14283831-14283974, 14284091-14284280, 14284401-14284467, 14284606-14284687, 14284788-14284849, 14284944-14285074, 14285178-14285335, 14286515-14286628, 14286706-14286878, 14287018-14287097, 14287303-14287536, 14287700-14287763)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022638-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14882803 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:14882017-14882076, 14882198-14882368, 14882485-14882584, 14882673-14882803, 14882945-14883235)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022686-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c14925080-14924974, c14923901-14923732, c14923526-14923453, c14922086-14922077, c14921950-14921848, c14921598-14921437, c14921261-14921216, c14921030-14920926, c14920448-14920344, c14920040-14919945, c14919636-14919511, c14919256-14919137, c14918614-14918481, c14918273-14918147, c14917908-14917816, c14917406-14917224, c14916899-14916752, c14916470-14915391, c14915248-14912517)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022692-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15090391 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c15100731-15100722, c15100434-15100316, c15100085-15099890, c15099289-15099132, c15098713-15098647, c15097996-15097958, c15097585-15097411, c15097296-15097185, c15096945-15096865, c15096310-15096254, c15094937-15094888, c15094537-15094296, c15091347-15091223, c15091117-15091071, c15090837-15090723, c15090519-15090391, c15090219-15090040, c15089892-15088768, c15088657-15088397, c15088021-15087914, c15087472-15087429, c15087232-15087126, c15087020-15086959)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022725-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c15182212-15181885, c15180749-15180741, c15179708-15179670, c15179535-15179464, c15179247-15179111)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022735-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15287454 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c15287776-15287675, c15287589-15287454, c15287309-15287204, c15287062-15286945, c15286806-15286624, c15286256-15286135, c15283729-15283633, c15283499-15283335, c15283230-15282868)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022747-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c15691287-15691196, c15691045-15690961, c15690748-15690648, c15690470-15690395, c15690131-15690017, c15689938-15689932, c15689842-15689704, c15689559-15689470, c15689347-15689246, c15688980-15688617, c15688365-15688203, c15688114-15688060)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022787-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15699918 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:15693040-15693246, 15693464-15693633, 15693978-15694048, 15694133-15694247, 15694322-15694421, 15694637-15694710, 15694788-15694884, 15694963-15695096, 15695264-15695411, 15695508-15695601, 15695773-15695852, 15696131-15696209, 15697354-15697408, 15697591-15697736, 15698040-15698101, 15698221-15698353, 15698591-15698721, 15698822-15698959, 15699388-15699575, 15699770-15699918, 15700030-15700148, 15700236-15700355, 15700554-15700619, 15701043-15701199, 15701345-15701456, 15701593-15701681, 15701932-15702065, 15702728-15702895, 15703078-15703122)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022788-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16437601 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:16437554-16437601, 16439817-16439906, 16440064-16440189, 16440399-16440569, 16440708-16440824, 16441054-16441218, 16442949-16443101, 16443326-16443578, 16443764-16443887, 16444062-16444242)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022857-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16527905 of lcl|scaffold_12 FEATURE: CDS: hypothetical protein [(lcl|scaffold_12:c16529729-16529651, c16529476-16528751, c16528054-16527905, c16525913-16525773, c16525653-16525516, c16524738-16524589, c16524472-16523265)] [lcl|scaffold_12: delta, dna len= 17010411] -> [gnl|ncbi|FUN_022863-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1228608 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:1222901-1225753, 1228517-1228608, 1230106-1230298)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2752057 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c2760234-2760193, c2759923-2759748, c2759545-2759359, c2759187-2759115, c2759014-2758901, c2758704-2758574, c2758279-2758195, c2757975-2757873, c2757483-2757291, c2756741-2756602, c2756205-2756172, c2756053-2755914, c2755595-2755431, c2755229-2755120, c2755015-2754912, c2754569-2754446, c2754292-2754165, c2752556-2752322, c2752163-2752057, c2751916-2751693, c2751417-2751213, c2751069-2750956, c2750650-2750517, c2750384-2749688)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3101277 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:3094072-3094221, 3094414-3094566, 3094699-3094780, 3095026-3095106, 3095389-3095474, 3095735-3095925, 3096170-3096293, 3096581-3096674, 3096892-3097122, 3097346-3097516, 3097628-3097712, 3097853-3098032, 3098248-3098354, 3098464-3098567, 3099140-3099247, 3099382-3099455, 3099827-3099905, 3100141-3100220, 3100346-3100483, 3100740-3100825, 3101129-3101277, 3101515-3101638, 3102046-3102143, 3102677-3102878, 3103269-3103330, 3103802-3103808, 3104497-3104645, 3106017-3106092, 3106231-3106314)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3724838 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c3725380-3724838, c3723097-3720980)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3963174 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:3963049-3963174, 3964004-3964109, 3964452-3964604, 3964732-3964803, 3965003-3965108, 3965301-3965343, 3965894-3965980, 3966543-3966623, 3966983-3967151)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4426048 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:4421854-4422191, 4422976-4423317, 4423567-4423695, 4423841-4424005, 4425014-4425076, 4425565-4425666, 4425975-4426048, 4426113-4426236, 4426503-4426533, 4426783-4426843)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5373627 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c5374690-5374509, c5373783-5373627, c5373480-5373276, c5372886-5372725, c5372322-5372222, c5371889-5371483)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7096210 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:7096048-7096210, 7096777-7096924, 7097059-7097215, 7097841-7097969, 7098140-7098259, 7098467-7098570, 7098700-7098846, 7098972-7099091, 7099272-7099349, 7100131-7100170, 7100359-7100525, 7100748-7101368, 7101530-7101920)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7096777 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:7096048-7096210, 7096777-7096924, 7097059-7097215, 7097841-7097969, 7098140-7098259, 7098467-7098570, 7098700-7098846, 7098972-7099091, 7099272-7099349, 7100131-7100170, 7100359-7100525, 7100748-7101368, 7101530-7101920)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7109934 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:7102935-7102976, 7103141-7103255, 7103846-7104058, 7104536-7104718, 7104938-7105041, 7105133-7105253, 7105454-7105745, 7105949-7106114, 7106273-7106360, 7106504-7106721, 7106983-7107133, 7107406-7107615, 7107854-7108925, 7109275-7109440, 7109731-7109934, 7110072-7110300, 7110527-7110709, 7110837-7110953, 7111068-7111139, 7111238-7111323, 7111468-7111629, 7111763-7111907, 7112066-7112217, 7113160-7113342, 7113607-7113788, 7113838-7114021)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9091313 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c9100832-9100576, c9099334-9099187, c9097552-9097521, c9097328-9097250, c9095495-9095448, c9095326-9095244, c9095138-9095067, c9094360-9094319, c9091404-9091313, c9091080-9090909, c9089464-9089356, c9089229-9089072, c9088275-9088207, c9087538-9086103)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c>9160104-9160061, c9159223-9159094, c9158875-9158695, c9158607-9158503, c9158386-9158333, c9158214-9158007, c9157899-9157713, c9157476-9157190, c9156985-9156915)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9160104 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c>9160104-9160061, c9159223-9159094, c9158875-9158695, c9158607-9158503, c9158386-9158333, c9158214-9158007, c9157899-9157713, c9157476-9157190, c9156985-9156915)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10514093 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c10524259-10524237, c10523122-10523031, c10522589-10522551, c10522041-10521928, c10520928-10520734, c10520443-10520191, c10520034-10519867, c10519668-10519567, c10519439-10519325, c10519098-10518982, c10518872-10518691, c10518486-10518375, c10518183-10518074, c10517857-10517722, c10517630-10517520, c10517169-10517004, c10516850-10516615, c10515644-10515621, c10514212-10514093, c10513952-10513868, c10513567-10513440, c10513323-10513212, c10513022-10510529)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10545998 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:10545196-10545361, 10545565-10545680, 10545895-10545998, 10546134-10546203, 10546329-10546402, 10546524-10546686, 10546987-10547076, 10547604-10547686, 10547772-10547839, 10548002-10548120, 10548243-10548435, 10548594-10548698, 10548797-10548907, 10548988-10549073, 10549201-10549308, 10549413-10549526, 10549647-10549752, 10550056-10550228, 10550310-10550462, 10550696-10551806)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10546134 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:10545196-10545361, 10545565-10545680, 10545895-10545998, 10546134-10546203, 10546329-10546402, 10546524-10546686, 10546987-10547076, 10547604-10547686, 10547772-10547839, 10548002-10548120, 10548243-10548435, 10548594-10548698, 10548797-10548907, 10548988-10549073, 10549201-10549308, 10549413-10549526, 10549647-10549752, 10550056-10550228, 10550310-10550462, 10550696-10551806)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11345401 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c11351339-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11345211 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c11351339-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11342615 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c11351339-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11335087 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c11351339-11351205, c11350212-11350108, c11350008-11349817, c11349505-11349346, c11349110-11348935, c11348620-11348510, c11348257-11347985, c11347820-11347674, c11347477-11347378, c11347257-11347121, c11346755-11346624, c11346163-11346037, c11345630-11345401, c11345270-11345211, c11345103-11344933, c11344753-11344609, c11343885-11343767, c11343638-11343495, c11343365-11343202, c11343089-11342958, c11342842-11342615, c11342498-11342354, c11342250-11342130, c11340824-11340714, c11340582-11340469, c11340366-11340230, c11339539-11339360, c11338994-11338923, c11338811-11338651, c11338525-11338364, c11338042-11337931, c11337694-11337605, c11337406-11337297, c11337089-11336954, c11336680-11336531, c11336428-11336060, c11335878-11335731, c11335576-11335365, c11335161-11335087, ...] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12387314 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:12387161-12387314, 12388693-12388873, 12389220-12389362, 12389475-12389612, 12389746-12389846, 12389994-12390160, 12390677-12390842, 12391001-12391103, 12391338-12391492, 12391644-12393238)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12451858 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:12441162-12441209, 12442476-12442659, 12443363-12443512, 12443806-12443888, 12444241-12444300, 12444996-12445214, 12445622-12445716, 12446220-12446364, 12446645-12446737, 12446833-12446898, 12447921-12448052, 12448468-12448596, 12448707-12448841, 12448978-12449103, 12449215-12449298, 12449683-12449811, 12450135-12450219, 12450406-12451858, 12451998-12452455)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14283346 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:14282720-14282803, 14282968-14283103, 14283222-14283346, 14283508-14283553, 14283831-14283974, 14284091-14284280, 14284401-14284467, 14284606-14284687, 14284788-14284849, 14284944-14285074, 14285178-14285335, 14286515-14286628, 14286706-14286878, 14287018-14287097, 14287303-14287536, 14287700-14288402)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14882803 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:14881919-14882076, 14882198-14882368, 14882485-14882584, 14882673-14882803, 14882945-14883683)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15103548 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c15103820-15103548, c15100769-15100722, c15100434-15100316, c15100085-15099890, c15099289-15099132, c15098713-15098647, c15097996-15097958, c15097585-15097411, c15097296-15097185, c15096945-15096865, c15096310-15096254, c15094937-15094888, c15094537-15094296, c15091347-15091223, c15091117-15091071, c15090837-15090723, c15090519-15090391, c15090219-15090040, c15089892-15088768, c15088657-15088397, c15088021-15087914, c15087472-15087429, c15087232-15087126, c15087020-15085599)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15090391 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c15103820-15103548, c15100769-15100722, c15100434-15100316, c15100085-15099890, c15099289-15099132, c15098713-15098647, c15097996-15097958, c15097585-15097411, c15097296-15097185, c15096945-15096865, c15096310-15096254, c15094937-15094888, c15094537-15094296, c15091347-15091223, c15091117-15091071, c15090837-15090723, c15090519-15090391, c15090219-15090040, c15089892-15088768, c15088657-15088397, c15088021-15087914, c15087472-15087429, c15087232-15087126, c15087020-15085599)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15287454 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c15287977-15287675, c15287589-15287454, c15287309-15287204, c15287062-15286945, c15286806-15286624, c15286256-15286135, c15283729-15283633, c15283499-15283335, c15283230-15281905)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15699918 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:15692395-15692669, 15692963-15693246, 15693464-15693633, 15693978-15694048, 15694133-15694247, 15694322-15694421, 15694637-15694710, 15694788-15694884, 15694963-15695096, 15695264-15695411, 15695508-15695601, 15695773-15695852, 15696131-15696209, 15697354-15697408, 15697591-15697736, 15698040-15698101, 15698221-15698353, 15698591-15698721, 15698822-15698959, 15699388-15699575, 15699770-15699918, 15700030-15700148, 15700236-15700355, 15700554-15700619, 15701043-15701199, 15701345-15701456, 15701593-15701681, 15701932-15702065, 15702728-15702895, 15703078-15703749)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16437601 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:16437545-16437601, 16439817-16439906, 16440064-16440189, 16440399-16440569, 16440708-16440824, 16441054-16441218, 16442949-16443101, 16443326-16443578, 16443764-16443887, 16444062-16445307)] [lcl|scaffold_12: delta, dna len= 17010411]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16527905 of lcl|scaffold_12 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_12:c16531970-16531852, c16530529-16530454, c16529748-16529651, c16529476-16528751, c16528054-16527905, c16525913-16525773, c16525653-16525516, c16524738-16524589, c16524472-16521604)] [lcl|scaffold_12: delta, dna len= 17010411]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 672668 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:669561-669650, 670110-670197, 670317-670369, 670487-670562, 670688-670755, 671162-671337, 671587-671737, 671997-672097, 672260-672392, 672611-672668, 672807-672943, 673499-673654, 674486-674604, 675107-675230, 675420-675515, 676147-676254, 676411-676476, 676709-676820, 677408-677526, 677693-677839)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029650-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 672807 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:669561-669650, 670110-670197, 670317-670369, 670487-670562, 670688-670755, 671162-671337, 671587-671737, 671997-672097, 672260-672392, 672611-672668, 672807-672943, 673499-673654, 674486-674604, 675107-675230, 675420-675515, 676147-676254, 676411-676476, 676709-676820, 677408-677526, 677693-677839)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029650-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c999886-999716, c996032-995931, c994955-994842, c994559-994498, c992949-992881, c992436-992348, c991898-991825, c991651-991608, c991444-991200, c991004-990562, c990058-989866, c989725-989712, c989509-989246, c988608-988525, c988426-988237, c988087-987918)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029690-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c992984-992881, c992436-992348, c991898-991825, c991651-991608, c991444-991200, c991004-990562, c990058-989866, c989725-989712, c989509-989246, c988608-988525, c988426-988237, c988087-987918)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029690-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1294597 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c1294599-1294597, c1293897-1293791, c1293721-1293648, c1292488-1292423, c1291367-1291323, c1290130-1290063, c1289951-1289897, c1289821-1289779, c1289406-1289301, c1289225-1289094)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029722-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c1798963-1798911, c1798201-1798193, c1797092-1796966)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029788-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c1946933-1946858, c1946700-1946533, c1945501-1945332, c1944772-1944616, c1943628-1943437, c1941271-1941145, c1939745-1939543, c1939439-1939248, c1938945-1938807, c1934718-1934531, c1934412-1934218, c1933663-1933547, c1931090-1931027, c1930853-1930791, c1930197-1929991, c1927237-1927224, c1926831-1926718, c1926326-1926231, c1924939-1924736, c1923182-1923058, c1922920-1922824, c1919303-1919199, c1918916-1918798, c1918655-1918586, c1917937-1917921)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029798-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2681606 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:2680361-2680553, 2681413-2681606, 2681893-2682008, 2682292-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685094)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029875-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2682875 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:2680361-2680553, 2681413-2681606, 2681893-2682008, 2682292-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685094)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029875-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2682875 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:2682392-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685094)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029875-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2764915 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c2765237-2765139, c2764986-2764915, c2764829-2764731, c2764530-2764414)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029887-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4002087 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:4001338-4001487, 4001691-4001783, 4001917-4002087, 4002327-4002491)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_029998-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4241202 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:4233553-4233604, 4234051-4234179, 4234415-4234548, 4234629-4234706, 4235003-4235081, 4235361-4235486, 4235794-4235878, 4236025-4236126, 4236236-4236320, 4236935-4237090, 4237241-4237310, 4237554-4237664, 4238229-4238442, 4238665-4238798, 4238954-4239144, 4239233-4239314, 4239519-4239601, 4240405-4240449, 4240775-4240879, 4241116-4241202, 4241365-4241910)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030026-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:4269312-4270276, 4272446-4272506, 4272625-4272635, 4272957-4273017, 4273128-4273223, 4273422-4273562, 4273679-4273866, 4274045-4274162, 4274410-4274553, 4274626-4274756, 4275876-4276032)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030029-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4293828 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c4299442-4299382, c4297859-4297750, c4297500-4297243, c4296880-4296762, c4296568-4296291, c4296202-4296075, c4295976-4295841, c4295473-4295301, c4295191-4294958, c4294795-4294592, c4294464-4294253, c4293959-4293828, c4293687-4293588, c4293477-4293286, c4292675-4292475, c4292217-4292080, c4291970-4291849, c4291621-4291448, c4291331-4291190, c4291026-4290895, c4290768-4290651, c4290518-4290394, c4290234-4290142, c4290027-4289886, c4289753-4289584, c4289349-4289172, c4288312-4288220, c4288051-4287960, c4287847-4287714, c4287552-4287408, c4287309-4287147, c4286701-4286303, c4286204-4286139, c4286026-4285859, c4285719-4285611, c4285354-4285222, c4285074-4284879, c4284620-4284442, c4284126-4284112)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030031-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4750257 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:4750254-4750257, 4750391-4750600, 4750759-4751009, 4751157-4751395, 4751649-4751850, 4751965-4752109, 4752202-4752305, 4752423-4752557, 4752715-4752918, 4753007-4753165, 4753289-4753408, 4753510-4753782, 4753874-4753934, 4754057-4754247)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030080-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5260829 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c5267327-5267212, c5266917-5266772, c5266623-5266526, c5266130-5265918, c5265815-5265642, c5265507-5265406, c5265302-5265165, c5265052-5264914, c5264716-5264559, c5264299-5264174, c5264067-5263957, c5263848-5263743, c5263615-5263506, c5263382-5263290, c5262503-5262389, c5262128-5262007, c5261890-5261742, c5261643-5261412, c5261298-5261164, c5261029-5260829, c5260455-5260260, c5260152-5260061, c5259842-5259687, c5259502-5259419, c5259293-5259093, c5258825-5258675, c5258331-5258167, c5257792-5257591, c5256161-5256082, c5255886-5255788, c5255109-5254978, c5254886-5254789, c5254687-5254520)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030130-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:5439153-5439190, 5439413-5439486, 5439711-5439857, 5440563-5440572, 5441972-5442098, 5442773-5442862, 5445116-5445241, 5445470-5445622, 5445832-5446042, 5446350-5446470, 5446955-5447291)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030154-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c5620691-5620679, c5619434-5619240, c5616456-5616216, c5615100-5614985, c5613933-5613801, c5613576-5613473, c5612401-5612207, c5611884-5611618, c5610495-5610326, c5609950-5609945, c5609676-5609543, c5609274-5609121, c5608227-5608086, c5607621-5607374)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030175-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5997591 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:5989411-5989423, 5989698-5989820, 5990116-5990199, 5991597-5991715, 5992806-5992935, 5992950-5993102, 5993292-5993503, 5994443-5994610, 5994849-5994960, 5996637-5996810, 5996964-5997044, 5997156-5997591, 5997628-5998505, 5998745-5999074, 6000826-6001390, 6001756-6002021, 6002157-6002331, 6002522-6002577, 6003157-6003215, 6003453-6003590, 6003964-6004040, 6004137-6004152)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030210-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6101625 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c6104372-6104113, c6103789-6103629, c6102708-6102556, c6101997-6101860, c6101676-6101625, c6101491-6101389, c6101287-6101175, c6100958-6100847)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030218-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6101491 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c6104372-6104113, c6103789-6103629, c6102708-6102556, c6101997-6101860, c6101676-6101625, c6101491-6101389, c6101287-6101175, c6100958-6100847)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030218-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6172353 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:6170987-6171171, 6171567-6171831, 6172060-6172194, 6172292-6172353, 6172443-6172504, 6172643-6172816, 6172938-6173061, 6173191-6173449)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030226-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7010163 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c7012651-7012046, c7011548-7011360, c7011256-7010955, c7010868-7010773, c7010359-7010163, c7010041-7009957, c7009779-7009665, c7009444-7009396, c7009175-7009069, c7006595-7006485)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030306-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7072486 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c7074827-7074725, c7074369-7074149, c7073817-7073584, c7073481-7073307, c7073200-7073082, c7072964-7072803, c7072618-7072486, c7072181-7072034, c7071824-7071734, c7071564-7071400)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030316-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c8139026-8139023, c8138673-8136486, c8136386-8136322, c8136200-8136097, c8136008-8135959, c8135869-8135826, c8135615-8135602, c8135403-8135317, c8135068-8135005, c8134678-8134527, c8134364-8134272, c8134171-8133957, c8133871-8133805, c8133604-8133433, c8133319-8133219, c8133122-8132957, c8132861-8132709, c8132610-8132407, c8132254-8132071, c8131875-8131668)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030421-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8181220 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:8179655-8179715, 8180455-8180504, 8180624-8180701, 8180885-8181011, 8181186-8181220, 8181332-8181424, 8181966-8182025, 8182358-8182453, 8182561-8182617, 8182795-8182881, 8183126-8183224, 8183310-8183432, 8183522-8183622, 8183715-8183800, 8183894-8184033, 8184206-8184354, 8184495-8184578, 8184662-8184786, 8184897-8185009, 8185128-8185302, 8185422-8185496, 8185590-8185660, 8185743-8185775, 8185878-8186046, 8186170-8186234, 8186321-8186393, 8186579-8186751)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030425-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8186393 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:8179655-8179715, 8180455-8180504, 8180624-8180701, 8180885-8181011, 8181186-8181220, 8181332-8181424, 8181966-8182025, 8182358-8182453, 8182561-8182617, 8182795-8182881, 8183126-8183224, 8183310-8183432, 8183522-8183622, 8183715-8183800, 8183894-8184033, 8184206-8184354, 8184495-8184578, 8184662-8184786, 8184897-8185009, 8185128-8185302, 8185422-8185496, 8185590-8185660, 8185743-8185775, 8185878-8186046, 8186170-8186234, 8186321-8186393, 8186579-8186751)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030425-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8856463 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:8854086-8854292, 8854410-8854485, 8854632-8854732, 8854896-8855017, 8855155-8855221, 8855342-8855439, 8855584-8855665, 8855749-8855868, 8856059-8856167, 8856375-8856463, 8856588-8856678, 8856792-8856919, 8857030-8857133, 8857356-8857437, 8857544-8857620, 8857857-8857944, 8858069-8858162, 8858526-8858596, 8858745-8858870, 8858969-8859073, 8859387-8859455, 8859582-8859657, 8859903-8860033, 8860332-8860484, 8860734-8860982, 8861116-8861227, 8861369-8861577, 8861765-8861914, 8862078-8862143)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030520-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c9190791-9190695, c9190422-9190410, c9190274-9190191, c9189665-9189639, c9188965-9188894, c9188558-9188546, c9188450-9188406, c9188300-9188265, c9188131-9188051, c9187548-9187452, c9187260-9187127, c9186992-9186873, c9186759-9186630, c9186118-9186016, c9185874-9185805)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030561-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9691171 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:9690616-9690781, 9691020-9691171, 9691353-9691475, 9691590-9691683, 9691852-9691967)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030613-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9781553 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c9782158-9782151, c9781684-9781553, c9781273-9781135, c9780999-9780796)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030625-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:9965221-9965254, 9966979-9967122, 9969058-9969134, 9969272-9969364, 9969625-9969770, 9969987-9970122, 9970324-9970394, 9970527-9970586, 9970890-9970967, 9971084-9971251, 9971470-9971510, 9974022-9974123, 9976728-9976901, 9977529-9977573, 9978744-9978851, 9981172-9981278, 9981889-9982044, 9982732-9982823, 9983044-9983107, 9983918-9983977, 9984453-9984455, 9985100-9985263, 9985542-9985620, 9986943-9987086, 9987187-9987330, 9987654-9987760, 9987895-9988012, 9989252-9989456, 9989607-9989800, 9989988-9990116, 9990261-9990467, 9990882-9990998, 9991117-9991191)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030646-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c10523857-10523824, c10523288-10523187, c10521941-10521835, c10520398-10520204, c10519854-10519786, c10517514-10517382, c10512470-10512129, c10512058-10511980, c10510588-10510486, c10509012-10508641, c10508187-10508053, c10507752-10507746, c10507644-10507490)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030701-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12090131 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:12087907-12087996, 12088287-12088446, 12088550-12088674, 12088757-12088810, 12088913-12089011, 12089134-12089217, 12089700-12090131, 12090294-12090575)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030838-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12138537 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:12133065-12133257, 12135440-12135569, 12135815-12135975, 12136095-12136147, 12136782-12136908, 12137370-12137545, 12137758-12138106, 12138307-12138537, 12139033-12139242, 12140208-12141886)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030849-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12226967 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c12227439-12227371, c12227079-12226967, c12226588-12226450)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030860-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:13670871-13670998, 13671562-13671706, 13672532-13672635, 13673213-13673319, 13673397-13673410, 13674883-13675023, 13677345-13677470, 13678090-13678200)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_030984-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13894238 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c13895676-13895586, c13894884-13894724, c13894297-13894238, c13894146-13894048, c13892022-13891917, c13891092-13890970, c13890817-13890690, c13890338-13890157, c13889934-13889790, c13889518-13889329, c13888484-13888369, c13888168-13888005, c13887885-13887794, c13887047-13886242)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_031015-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:c14127993-14127987, c14127207-14127146, c14125753-14125739, c14124852-14124763, c14124266-14124231, c14123094-14123017, c14122783-14122691, c14121673-14121507, c14121477-14121075)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_031051-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14380545 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:14374084-14374113, 14374845-14374953, 14376464-14376571, 14378979-14379098, 14379610-14379758, 14380074-14380198, 14380448-14380545, 14380567-14380731, 14381019-14381511, 14381736-14381916, 14382172-14382276, 14382515-14382565, 14382657-14382723, 14382825-14383106, 14383582-14383592)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_031082-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14874490 of lcl|scaffold_17 FEATURE: CDS: hypothetical protein [(lcl|scaffold_17:14870933-14871093, 14871621-14871864, 14872316-14872516, 14873474-14873664, 14873886-14873985, 14874386-14874490, 14874579-14874611)] [lcl|scaffold_17: delta, dna len= 14984245] -> [gnl|ncbi|FUN_031135-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 672668 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:669547-669650, 670110-670197, 670317-670369, 670487-670562, 670688-670755, 671162-671337, 671587-671737, 671997-672097, 672260-672392, 672611-672668, 672807-672943, 673499-673654, 674486-674604, 675107-675230, 675420-675515, 676147-676254, 676411-676476, 676709-676820, 677408-677526, 677693-678719)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 672807 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:669547-669650, 670110-670197, 670317-670369, 670487-670562, 670688-670755, 671162-671337, 671587-671737, 671997-672097, 672260-672392, 672611-672668, 672807-672943, 673499-673654, 674486-674604, 675107-675230, 675420-675515, 676147-676254, 676411-676476, 676709-676820, 677408-677526, 677693-678719)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1123910 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:1123773-1123910, 1124742-1124849, 1125378-1125545, 1125848-1126042, 1126152-1126284, 1126454-1126624, 1127037-1127155, 1127360-1128140, 1128600-1128949)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1294597 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c1294702-1294597, c1293897-1293791, c1293721-1293648, c1292488-1292423, c1291367-1291323, c1290130-1290063, c1289951-1289897, c1289821-1289779, c1289406-1289301, c1289225-1287981)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2681606 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:2679785-2680553, 2681413-2681606, 2681893-2682008, 2682292-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685100, 2685191-2685582)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2682875 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:2679785-2680553, 2681413-2681606, 2681893-2682008, 2682292-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685100, 2685191-2685582)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2681606 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:2679785-2680553, 2681413-2681606, 2682292-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685100, 2685191-2685582)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2682875 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:2679785-2680553, 2681413-2681606, 2682292-2682431, 2682533-2682627, 2682738-2682875, 2683135-2683503, 2683834-2683924, 2684049-2684159, 2684282-2684427, 2684523-2684607, 2684737-2684867, 2685002-2685100, 2685191-2685582)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2764915 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c2765732-2765657, c2765259-2765139, c2764986-2764915, c2764829-2764731, c2764530-2764204)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4002087 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:4001338-4001487, 4001691-4001783, 4001917-4002087, 4002327-4002491)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4241202 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:4231968-4232003, 4233070-4233358, 4233473-4233604, 4234051-4234179, 4234415-4234548, 4234629-4234706, 4235003-4235081, 4235361-4235486, 4235794-4235878, 4236025-4236126, 4236236-4236320, 4236935-4237090, 4237241-4237310, 4237554-4237664, 4238229-4238442, 4238665-4238798, 4238954-4239144, 4239233-4239314, 4239519-4239601, 4240405-4240449, 4240775-4240879, 4241116-4241202, 4241365-4242889)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4293828 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c4299557-4299382, c4297859-4297750, c4297500-4297243, c4296880-4296762, c4296568-4296291, c4296202-4296075, c4295976-4295841, c4295473-4295301, c4295191-4294958, c4294795-4294592, c4294464-4294253, c4293959-4293828, c4293687-4293588, c4293477-4293286, c4292675-4292475, c4292217-4292080, c4291970-4291849, c4291621-4291448, c4291331-4291190, c4291026-4290895, c4290768-4290651, c4290518-4290394, c4290234-4290142, c4290027-4289886, c4289753-4289584, c4289349-4289172, c4288312-4288220, c4288051-4287960, c4287847-4287714, c4287552-4287408, c4287309-4287147, c4286701-4286303, c4286204-4286139, c4286026-4285859, c4285719-4285611, c4285354-4285222, c4285074-4284879, c4284620-4284442, c4284126-4283955)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4750257 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:4748998-4749168, 4750217-4750257, 4750391-4750600, 4750759-4751009, 4751157-4751395, 4751649-4751850, 4751965-4752109, 4752202-4752305, 4752423-4752557, 4752715-4752918, 4753007-4753165, 4753289-4753408, 4753510-4753782, 4753874-4753934, 4754057-4754252, 4754363-4755211)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5260829 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c5267327-5267212, c5266917-5266772, c5266623-5266526, c5266130-5265918, c5265815-5265642, c5265507-5265406, c5265302-5265165, c5265052-5264914, c5264716-5264559, c5264299-5264174, c5264067-5263957, c5263848-5263743, c5263615-5263506, c5263382-5263290, c5262503-5262389, c5262128-5262007, c5261890-5261742, c5261643-5261412, c5261298-5261164, c5261029-5260829, c5260455-5260260, c5260152-5260061, c5259842-5259687, c5259502-5259419, c5259293-5259093, c5258825-5258675, c5258331-5258167, c5257792-5257591, c5256161-5256082, c5255886-5255788, c5255109-5254978, c5254886-5254789, c5254687-5254207)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5997591 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:5989411-5989423, 5989698-5989820, 5990116-5990199, 5991597-5991715, 5992806-5992935, 5992950-5993102, 5993292-5993503, 5994443-5994610, 5994849-5994960, 5996637-5996810, 5996964-5997044, 5997156-5997591, 5997628-5998505, 5998745-5999074, 6000826-6001390, 6001756-6002021, 6002157-6002331, 6002522-6002577, 6003157-6003215, 6003453-6003590, 6003964-6004040, 6004137-6004152)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6101625 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c6104492-6104113, c6103789-6103629, c6102708-6102556, c6101997-6101860, c6101676-6101625, c6101491-6101389, c6101287-6101175, c6100958-6099361)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6101491 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c6104492-6104113, c6103789-6103629, c6102708-6102556, c6101997-6101860, c6101676-6101625, c6101491-6101389, c6101287-6101175, c6100958-6099361)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6172353 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:6170987-6171171, 6171567-6171831, 6172060-6172194, 6172292-6172353, 6172443-6172504, 6172643-6172816, 6172938-6173061, 6173191-6173449)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7010163 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c7012651-7012046, c7011548-7011360, c7011256-7010955, c7010868-7010773, c7010359-7010163, c7010041-7009957, c7009779-7009665, c7009444-7009396, c7009175-7009069, c7006595-7006485)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7072486 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c7075593-7075506, c7075158-7075080, c7074840-7074725, c7074369-7074149, c7073817-7073584, c7073481-7073307, c7073200-7073082, c7072964-7072803, c7072618-7072486, c7072181-7072034, c7071824-7071734, c7071564-7071219)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8181220 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:8179496-8179715, 8180455-8180504, 8180624-8180701, 8180885-8181011, 8181186-8181220, 8181332-8181424, 8181966-8182025, 8182358-8182453, 8182561-8182617, 8182795-8182881, 8183126-8183224, 8183310-8183432, 8183522-8183622, 8183715-8183800, 8183894-8184033, 8184206-8184354, 8184495-8184578, 8184662-8184786, 8184897-8185009, 8185128-8185302, 8185422-8185496, 8185590-8185660, 8185743-8185775, 8185878-8186046, 8186170-8186234, 8186321-8186393, 8186579-8187124)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8186393 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:8179496-8179715, 8180455-8180504, 8180624-8180701, 8180885-8181011, 8181186-8181220, 8181332-8181424, 8181966-8182025, 8182358-8182453, 8182561-8182617, 8182795-8182881, 8183126-8183224, 8183310-8183432, 8183522-8183622, 8183715-8183800, 8183894-8184033, 8184206-8184354, 8184495-8184578, 8184662-8184786, 8184897-8185009, 8185128-8185302, 8185422-8185496, 8185590-8185660, 8185743-8185775, 8185878-8186046, 8186170-8186234, 8186321-8186393, 8186579-8187124)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8856463 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:8853728-8853738, 8854086-8854292, 8854410-8854485, 8854632-8854732, 8854896-8855017, 8855155-8855221, 8855342-8855439, 8855584-8855665, 8855749-8855868, 8856059-8856167, 8856375-8856463, 8856588-8856678, 8856792-8856919, 8857030-8857133, 8857356-8857437, 8857544-8857620, 8857857-8857944, 8858069-8858162, 8858526-8858596, 8858745-8858870, 8858969-8859073, 8859387-8859455, 8859582-8859657, 8859903-8860033, 8860332-8860484, 8860734-8860982, 8861116-8861227, 8861369-8861577, 8861765-8861914, 8862078-8862451)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9691171 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:9690616-9690781, 9691020-9691171, 9691353-9691475, 9691590-9691683, 9691852-9691967)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9781553 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c9782158-9782151, c9781684-9781553, c9781273-9781135, c9780999-9780796)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9994240 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:9994056-9994240, 9994720-9994931, 9997057-9997208, 9997396-9997472, 9997684-9997789, 9998041-9998147, 9998723-9998875, 9999062-9999172, 9999373-9999480, 9999814-9999917, 10000010-10000064, 10000188-10000278, 10000384-10000474, 10000598-10000716, 10000823-10000965, 10001399-10001450, 10001581-10002375)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12090131 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:12087714-12087996, 12088287-12088446, 12088550-12088674, 12088757-12088810, 12088913-12089011, 12089134-12089217, 12089700-12090131, 12090294-12090685)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12138537 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:12132808-12133257, 12135440-12135569, 12135815-12135975, 12136095-12136147, 12136782-12136908, 12137370-12137545, 12137758-12138106, 12138307-12138537, 12139033-12139242, 12140208-12142248, 12142795-12142892)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12226967 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c12227489-12227371, c12227079-12226967, c12226588-12226385)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13026292 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:13022013-13022093, 13025296-13025536, 13026253-13026292, 13026341-13027390)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13026341 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:13022013-13022093, 13025296-13025536, 13026253-13026292, 13026341-13027390)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13044270 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:13037875-13038314, 13039056-13039209, 13039483-13039578, 13039803-13039910, 13043106-13043189, 13043347-13043431, 13043735-13043789, 13044063-13044270, 13044480-13044494)] [lcl|scaffold_17: delta, dna len= 14984245]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13044480 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:13037875-13038314, 13039056-13039209, 13039483-13039578, 13039803-13039910, 13043106-13043189, 13043347-13043431, 13043735-13043789, 13044063-13044270, 13044480-13044494)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13894238 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c13895676-13895586, c13894884-13894724, c13894297-13894238, c13894146-13894048, c13892022-13891917, c13891092-13890970, c13890817-13890690, c13890338-13890157, c13889934-13889790, c13889518-13889329, c13888484-13888369, c13888168-13888005, c13887885-13887794, c13887047-13886242)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13962297 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:c13966090-13965829, c13964664-13964592, c13964324-13964158, c13963823-13963586, c13963117-13962976, c13962409-13962297, c13962266-13961985)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14380545 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:14374084-14374113, 14374845-14374953, 14376464-14376571, 14378979-14379098, 14379610-14379758, 14380074-14380198, 14380448-14380545, 14380567-14380731, 14381019-14381511, 14381736-14381916, 14382172-14382276, 14382515-14382565, 14382657-14382723, 14382825-14383106, 14383582-14384231)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14633345 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:14628480-14628592, 14629222-14629416, 14629531-14629827, 14630151-14630242, 14630495-14630665, 14630885-14631079, 14631354-14631473, 14631673-14631747, 14631843-14631935, 14632040-14632135, 14632438-14633345, 14633406-14633825)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14874490 of lcl|scaffold_17 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_17:14870933-14871093, 14871621-14871864, 14872316-14872516, 14873474-14873664, 14873886-14873985, 14874386-14874490, 14874579-14874739)] [lcl|scaffold_17: delta, dna len= 14984245]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 224571 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c230415-230276, c230134-229926, c229663-229495, c229154-229043, c228783-228600, c228447-228333, c227704-227647, c227540-227376, c226941-226696, c226348-226228, c225811-225708, c225575-225480, c225299-225112, c224994-224759, c224609-224571, c224378-224236)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036611-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 238377 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:234763-234966, 235307-235429, 235549-235678, 236348-236529, 237136-237255, 237367-237471, 237592-237737, 237857-237914, 238045-238377, 238580-238702)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036613-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 746144 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c746150-746144, c745966-745844, c745753-745642, c745446-745254)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036681-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:874465-874482, 875354-875470, 875859-875948, 876544-876626, 876844-876910, 878777-878872, 879593-879778, 881355-881538, 882542-882621, 883085-883168, 883742-883882, 884724-885002, 887038-887160, 887458-887540, 887736-887858, 888073-888149, 888425-888609, 888748-888813, 890683-890775, 892063-892186, 892346-892467, 892773-892862, 893151-893272, 893472-893541, 894209-894334, 894652-894723, 895299-895445, 895598-895681, 896028-896139, 897478-897659, 898620-898733, 899006-899081, 899496-899581, 900317-900434, 900581-900647, 900743-900790, 901104-901246, 901418-901533, 901771-901908, 902009-902191, 902613-902726, 903330-903545, 904050-904107, 906208-906314, 906726-906848, 907415-907528, 910164-910310, 911570-911780, 912522-912712, 915072-915172, 915405-915543, 917753-917832, ...] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036691-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2969456 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c2978461-2978318, c2976895-2976761, c2976225-2976091, c2974717-2974607, c2973396-2973314, c2972463-2972379, c2972278-2972132, c2969605-2969456, c2967380-2967212, c2965519-2965367, c2963789-2963646, c2961085-2960293, c2959415-2959348, c2959009-2958939)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036841-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c3786971-3786938, c3786129-3786025, c3783091-3783054, c3782821-3782716, c3782583-3782525, c3780564-3780504, c3779544-3779537, c3779401-3779321, c3776516-3776403)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036921-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c3797171-3797157, c3793866-3793779, c3793068-3793010, c3792611-3792561, c3791611-3791534, c3791143-3791000, c3790100-3789983, c3789564-3789160, c3788539-<3788453)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036922-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3788453 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c3797171-3797157, c3793866-3793779, c3793068-3793010, c3792611-3792561, c3791611-3791534, c3791143-3791000, c3790100-3789983, c3789564-3789160, c3788539-<3788453)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036922-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:3944661-3944710, 3945814-3945879, 3947739-3947811, 3948257-3948355, 3950226-3950234, 3950564-3950666, 3951329-3951412, 3952502-3952596, 3952737-3952859, 3952944-3953027, 3953297-3953339, 3954803-3954843, 3957034-3957087, 3958507-3958551, 3960651-3960699, 3962101-3962228, 3962832-3963170)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036942-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4221852 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c4236830-4232452, c4232328-4232260, c4232079-4231807, c4231498-4227885, c4227770-4227698, c4227358-4227164, c4226896-4226333, c4225893-4223395, c4223112-4223016, c4222923-4222757, c4222646-4222598, c4222512-4221997, c4221903-4221852, c4221539-4221484, c4221357-4221246, c4221125-4221026, c4220940-4220867, c4220494-4220380, c4220240-4220147)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036968-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4405244 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c4405963-4405794, c4405636-4405474, c4405390-4405244, c4405126-4404977, c4404847-4404742, c4404446-4404253)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_036996-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4416847 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c4417640-4417501, c4417240-4417078, c4416993-4416847, c4416729-4416580, c4416450-4416345, c4416172-4415943)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037000-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:4807424-4807525, 4809787-4809825, 4810953-4811061, 4812425-4812519, 4812983-4812997, 4814553-4814651)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037042-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5770250 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:5762108-5762194, 5764014-5764138, 5764352-5764414, 5767138-5767246, 5767424-5767682, 5767786-5767910, 5768608-5768744, 5769001-5769476, 5769623-5769694, 5770080-5770250, 5770361-5770491)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037123-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5834497 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c5847324-5847289, c5846473-5846397, c5843894-5843708, c5841637-5841572, c5840876-5840805, c5840154-5839988, c5839270-5839186, c5838445-5838303, c5838209-5838032, c5836863-5836774, c5836487-5836292, c5835489-5835381, c5834701-5834497, c5834295-5834218, c5832276-5832168, c5831180-5831133, c5830287-5830212, c5830074-5829837, c5829300-5829092, c5827932-5827881)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037131-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:5906797-5906820, 5907144-5907224, 5907315-5907424, 5907752-5907902, 5908129-5908237, 5908360-5908409, 5908768-5908770, 5908933-5908965)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037142-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5967084 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:5965133-5965353, 5965754-5966011, 5966445-5966633, 5966886-5967084, 5967230-5967444, 5967581-5967780, 5967946-5968076, 5968385-5968522, 5968615-5968755)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037153-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6513437 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:6506755-6506789, 6508137-6508266, 6508775-6508870, 6509199-6509313, 6509793-6509901, 6510045-6510259, 6510413-6510639, 6510776-6510929, 6511254-6511445, 6511548-6511702, 6511882-6512047, 6512167-6512378, 6512649-6512752, 6512967-6513067, 6513165-6513238, 6513355-6513437, 6513462-6513492, 6513627-6513848, 6513949-6514145, 6514534-6514694, 6515025-6515164, 6515496-6515540, 6516093-6516237, 6516623-6516690)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037219-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7131991 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c7135512-7135407, c7135303-7135258, c7134663-7134607, c7133962-7133795, c7133085-7132812, c7132423-7132318, c7132109-7131991, c7131818-7131708)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037284-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7404999 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:7401464-7401697, 7402474-7403940, 7404138-7404296, 7404611-7404835, 7404942-7404999, 7405104-7405247, 7405343-7405402, 7405501-7405677, 7406031-7406213, 7406311-7406964, 7407377-7407516, 7407732-7407912, 7408141-7408442)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037328-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:7914783-7914787, 7916225-7916490, 7916857-7916929, 7917064-7917111, 7917209-7917372, 7917792-7917905, 7918839-7918851, 7918889-7918991, 7919159-7919257)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037395-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:<8073336-8073411, 8074033-8074598)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037414-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8073336 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:<8073336-8073411, 8074033-8074598)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037414-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8770771 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c8783638-8783561, c8781447-8781289, c8778576-8778478, c8778180-8778034, c8777619-8777566, c8777321-8777199, c8776822-8776727, c8776486-8776379, c8776218-8776140, c8775305-8775171, c8774470-8774368, c8774130-8773976, c8772959-8772881, c8772734-8772586, c8772499-8772326, c8771478-8771339, c8770897-8770771, c8770487-8770383, c8770215-8770094, c8769115-8769071, c8768692-8768531, c8767970-8767917, c8767555-8767355, c8766664-8766491)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037488-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9153471 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c9162050-9161926, c9160917-9160812, c9159930-9159907, c9157645-9157570, c9157306-9157212, c9157002-9156895, c9156440-9156339, c9156175-9156092, c9155782-9155633, c9154986-9154780, c9154092-9154000, c9153584-9153471, c9153121-9152856, c9152675-9152510)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037516-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c9467392-9467299, c9466659-9466571, c9466297-9466285, c9465893-9465847)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037540-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:9634027-9634206, 9634537-9634770, 9635349-9635423, 9636282-9636371, 9636674-9636817, 9637273-9637361, 9637650-9637746, 9638761-9638922, 9639248-9639371, 9639622-9639720, 9639965-9640081, 9640573-9640684, 9641227-9641344, 9641854-9641885, 9643100-9643275, 9644275-9644282, 9644627-9644713, 9646918-9647010, 9647214-9647243)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037567-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:9634027-9634206, 9634537-9634770, 9635349-9635423, 9636282-9636371, 9636674-9636817, 9637273-9637361, 9637650-9637746, 9638761-9638922, 9639248-9639371, 9639622-9639720, 9639965-9640081, 9640573-9640684, 9641227-9641344, 9641854-9641885, 9643100-9643275, 9644275-9644282, 9644627-9644713, 9646918-9647037)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037567-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9870327 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c9870482-9870327, c9869772-9869599, c9868631-9868599)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037588-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:10090131-10090229, 10091090-10091095, 10092967-10093024, 10093235-10093328, 10093861-10093963, 10094187-10094281, 10102445-10102589)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037612-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c10279049-10279042, c10278234-10278049, c10277772-10277623, c10277409-10277225, c10277020-10276488, c10275045-10274860, c10274331-10274233, c10274118-10274075, c10273729-10272550, c10272528-10272274, c10272029-10271910, c10271224-10271102, c10270022-10269882, c10268697-10268608, c10268474-10268466, c10268247-10268140, c10266958-10266833, c10266717-10266676, c10266093-10265934, c10265369-10265269, c10265142-10265101)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037624-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10272550 of lcl|scaffold_22 FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:c10279049-10279042, c10278234-10278049, c10277772-10277623, c10277409-10277225, c10277020-10276488, c10275045-10274860, c10274331-10274233, c10274118-10274075, c10273729-10272550, c10272528-10272274, c10272029-10271910, c10271224-10271102, c10270022-10269882, c10268697-10268608, c10268474-10268466, c10268247-10268140, c10266958-10266833, c10266717-10266676, c10266093-10265934, c10265369-10265269, c10265142-10265101)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037624-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_22:10341809-10341826, 10343411-10343465, 10343615-10343623, 10343945-10344237, 10344573-10344651, 10344933-10344943, 10346031-10346088, 10346506-10346532, 10346746-10346835, 10346913-10347029, 10347340-10347459, 10347766-10347903, 10348017-10348147)] [lcl|scaffold_22: delta, dna len= 11768951] -> [gnl|ncbi|FUN_037628-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 224571 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c232213-232031, c230434-230276, c230134-229926, c229663-229495, c229154-229043, c228783-228600, c228447-228333, c227704-227647, c227540-227376, c226941-226696, c226348-226228, c225811-225708, c225575-225480, c225299-225112, c224994-224759, c224609-224571, c224378-222000)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 238377 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:234763-234966, 235307-235429, 235549-235678, 236348-236529, 237136-237255, 237367-237471, 237592-237737, 237857-237914, 238045-238377, 238580-240501)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 736409 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c736645-736409, c736232-736131, c735811-735701, c735462-735338, c735158-735084, c734759-734616, c734084-733903, c733604-733485, c733309-733204, c731500-731380, c731297-731165, c730974-730826, c730670-729051)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 746144 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c746309-746144, c745966-745844, c745753-745642, c745446-745220)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2969456 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c2978757-2978318, c2976895-2976761, c2976225-2976091, c2974717-2974607, c2973396-2973314, c2972463-2972379, c2972278-2972132, c2969605-2969456, c2967380-2967212, c2965519-2965367, c2963789-2963646, c2961085-2960293, c2959415-2959348, c2959009-2958939)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3788453 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c3797171-3797157, c3793866-3793779, c3793068-3793010, c3792611-3792561, c3791611-3791534, c3791143-3791000, c3790100-3789983, c3789564-3789160, c3788539-<3788453)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4221852 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c4236830-4232452, c4232328-4232260, c4232079-4231807, c4231498-4227885, c4227770-4227698, c4227358-4227164, c4226896-4226333, c4225893-4223395, c4223112-4223016, c4222923-4222757, c4222646-4222598, c4222512-4221997, c4221903-4221852, c4221539-4221484, c4221357-4221246, c4221125-4221026, c4220940-4220867, c4220494-4220380, c4220240-4220147)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4405244 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c4406021-4405794, c4405636-4405474, c4405390-4405244, c4405126-4404977, c4404847-4404742, c4404446-4404104)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4416847 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c4417861-4417501, c4417240-4417078, c4416993-4416847, c4416729-4416580, c4416450-4416345, c4416172-4415037)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5770250 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:5762108-5762194, 5764014-5764138, 5764352-5764414, 5767138-5767246, 5767424-5767682, 5767786-5767910, 5768608-5768744, 5769001-5769476, 5769623-5769694, 5770080-5770250, 5770361-5770625)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5834497 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c5847324-5847289, c5846473-5846397, c5843894-5843708, c5841637-5841572, c5840876-5840805, c5840154-5839988, c5839270-5839186, c5838445-5838303, c5838209-5838032, c5836863-5836774, c5836487-5836292, c5835489-5835381, c5834701-5834497, c5834295-5834218, c5832276-5832168, c5831180-5831133, c5830287-5830212, c5830074-5829837, c5829300-5829092, c5827932-5826994)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5967084 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:5964358-5964481, 5964894-5964965, 5965133-5965353, 5965754-5966011, 5966445-5966633, 5966886-5967084, 5967230-5967444, 5967581-5967780, 5967946-5968076, 5968385-5968522, 5968615-5970043)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6513437 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:6506755-6506789, 6508137-6508266, 6508775-6508870, 6509199-6509313, 6509793-6509901, 6510045-6510259, 6510413-6510639, 6510776-6510929, 6511254-6511445, 6511548-6511702, 6511882-6512047, 6512167-6512378, 6512649-6512752, 6512967-6513067, 6513165-6513238, 6513355-6513437, 6513462-6513492, 6513627-6513848, 6513949-6514145, 6514534-6514694, 6515025-6515164, 6515496-6515540, 6516093-6516237, 6516623-6516690)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7131991 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c7136220-7136120, c7135518-7135407, c7135303-7135258, c7134663-7134607, c7133962-7133795, c7133085-7132812, c7132423-7132318, c7132109-7131991, c7131818-7131403)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7404999 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:7401464-7401697, 7402474-7403940, 7404138-7404296, 7404611-7404835, 7404942-7404999, 7405104-7405247, 7405343-7405402, 7405501-7405677, 7406031-7406213, 7406311-7406964, 7407377-7407516, 7407732-7407912, 7408141-7408714)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:<8073335-8073411, 8074033-8074659)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8073335 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:<8073335-8073411, 8074033-8074659)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8770771 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c8784128-8783561, c8781447-8781289, c8778576-8778478, c8778180-8778034, c8777619-8777566, c8777321-8777199, c8776822-8776727, c8776486-8776379, c8776218-8776140, c8775305-8775171, c8774470-8774368, c8774130-8773976, c8772959-8772881, c8772734-8772586, c8772499-8772326, c8771478-8771339, c8770897-8770771, c8770487-8770383, c8770215-8770094, c8769115-8769071, c8768692-8768531, c8767970-8767917, c8767555-8767355, c8766664-8766436)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9153471 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c9162235-9161926, c9160917-9160812, c9159930-9159907, c9157645-9157570, c9157306-9157212, c9157002-9156895, c9156440-9156339, c9156175-9156092, c9155782-9155633, c9154986-9154780, c9154092-9154000, c9153584-9153471, c9153121-9152856, c9152675-9152510)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9402433 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:9399218-9399584, 9399782-9399876, 9400507-9400592, 9400956-9401180, 9401723-9402433, 9402477-9403154)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9402477 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:9399218-9399584, 9399782-9399876, 9400507-9400592, 9400956-9401180, 9401723-9402433, 9402477-9403154)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9539953 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c9541993-9540818, c9540631-9539953, c9537968-9537525)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9537968 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c9541993-9540818, c9540631-9539953, c9537968-9537525)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9870327 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c9870497-9870327, c9869772-9869599, c9868631-9868599)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10272550 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c10279049-10279042, c10278234-10278049, c10277772-10277623, c10277409-10277225, c10277020-10276488, c10275045-10274860, c10274331-10274233, c10274118-10274075, c10273729-10272550, c10272528-10272274, c10272029-10271910, c10271224-10271102, c10270022-10269882, c10268697-10268608, c10268474-10268466, c10268247-10268140, c10266958-10266833, c10266717-10266676, c10266093-10265934, c10265369-10265269, c10265142-10265101)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11326126 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c11344677-11344571, c11343127-11342995, c11340867-11340484, c11338047-11337831, c11333848-11333631, c11332798-11332685, c11330112-11330002, c11329915-11329793, c11329370-11329313, c11328714-11328543, c11328218-11328101, c11327917-11327810, c11327531-11327418, c11326807-11326697, c11326278-11326126, c11325318-11325186)] [lcl|scaffold_22: delta, dna len= 11768951]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11325318 of lcl|scaffold_22 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_22:c11344677-11344571, c11343127-11342995, c11340867-11340484, c11338047-11337831, c11333848-11333631, c11332798-11332685, c11330112-11330002, c11329915-11329793, c11329370-11329313, c11328714-11328543, c11328218-11328101, c11327917-11327810, c11327531-11327418, c11326807-11326697, c11326278-11326126, c11325318-11325186)] [lcl|scaffold_22: delta, dna len= 11768951]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 353785 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:347431-347500, 351171-351308, 353177-353274, 353620-353785, 354127-354239, 354400-354577, 355523-355687, 355793-355962, 356200-356291, 356522-356801)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042142-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:590192-590248, 590514-590659, 592296-592408, 592795-592921, 593544-593637, 595658-595745, 596801-596859, 598388-598546, 599014-599043, 600176-600302, 600893-600991, 601219-601338, 601459-601509, 602382-602525, 602888-602949, 603549-603702, 604996-605025, 605546-605604, 606752-606812, 606943-606950, 607175-607255, 607539-607652)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042162-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 631675 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:629580-629718, 629984-630151, 630513-630580, 630767-630925, 631544-631675, 632035-632130, 633175-633285)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042166-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1093357 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:1093294-1093357, 1094975-1095310, 1095628-1095693, 1096135-1096214, 1097155-1097266, 1097429-1097462, 1097572-1097656)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042217-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1446608 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:1442226-1442337, 1442707-1442893, 1443092-1443177, 1443358-1443459, 1443654-1443722, 1443873-1444030, 1444251-1444405, 1444801-1444955, 1445253-1445486, 1446406-1446608, 1448050-1448265)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042257-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1609442 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c1609487-1609442, c1606821-1606559)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042277-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1761819 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:1760094-1760210, 1760745-1760800, 1761004-1761158, 1761671-1761819, 1761950-1762015, 1762322-1762435, 1763260-1763451, 1763848-1763982, 1764075-1764150, 1764333-1764361, 1764550-1764649, 1764841-1765092, 1765396-1766001, 1766173-1766237, 1766410-1766439)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042293-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1774355 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:1769622-1769637, 1769949-1770015, 1770144-1770236, 1770485-1770544, 1770723-1771005, 1772107-1772177, 1772358-1772404, 1772695-1772858, 1772985-1773093, 1773279-1773318, 1773785-1773974, 1774153-1774171, 1774274-1774355, 1774456-1774539, 1775915-1775972, 1776076-1776164, 1776619-1776727, 1776835-1776869, 1777075-1777102)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042295-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1774456 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:1769622-1769637, 1769949-1770015, 1770144-1770236, 1770485-1770544, 1770723-1771005, 1772107-1772177, 1772358-1772404, 1772695-1772858, 1772985-1773093, 1773279-1773318, 1773785-1773974, 1774153-1774171, 1774274-1774355, 1774456-1774539, 1775915-1775972, 1776076-1776164, 1776619-1776727, 1776835-1776869, 1777075-1777102)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042295-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c2198983-2198945, c2198247-2198237, c2197944-2197873, c2197801-2197589, c2197571-2197478)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042347-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2625120 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c2628260-2628099, c2627941-2627840, c2627674-2627474, c2627039-2626842, c2626648-2626501, c2626312-2626218, c2626101-2625971, c2625837-2625701, c2625482-2625391, c2625230-2625120, c2624981-2624877)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042403-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2728018 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:2723819-2724361, 2724515-2724576, 2725235-2725323, 2725446-2725489, 2725629-2725745, 2725837-2725962, 2726056-2726217, 2726487-2726611, 2726715-2727198, 2727925-2728018, 2728124-2728140, 2728384-2728506, 2728998-2729126, 2729374-2729496, 2729729-2729857, 2729962-2730090, 2730458-2730588, 2730791-2730917, 2731329-2731452, 2731637-2731758, 2732097-2732135)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042417-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3411320 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:3411315-3411320, 3411567-3411688, 3411842-3411929, 3412039-3412119, 3412219-3412356, 3412497-3412658, 3412801-3412913, 3413028-3413091, 3413205-3413272, 3413409-3413634, 3416038-3416125, 3416737-3416813, 3417009-3417062, 3417143-3417283, 3417474-3417551, 3417656-3417741, 3417813-3417878, 3417975-3418057, 3418288-3418426, 3418663-3418875, 3418987-3419044, 3419191-3419254, 3420078-3420261, 3420395-3420485, 3420646-3420786, 3421544-3421681, 3422222-3422332, 3422619-3422729, 3422995-3423099, 3423854-3423949, 3424425-3424557, 3424929-3425130, 3425391-3425583)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042530-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:3732064-3732317, 3732656-3732668, 3733588-3733699, 3733896-3734058, 3735024-3735087)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042578-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3918999 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c3921108-3921029, c3920793-3920694, c3920466-3920403, c3920321-3920227, c3920124-3920020, c3919909-3919805, c3919687-3919604, c3919462-3919313, c3919187-3918999, c3918871-3918686, c3918581-3918375, c3918119-3918027, c3917931-3917818, c3917648-3917472, c3917272-3917108)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042606-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4004656 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:3979366-3979451, 3980495-3980550, 3980895-3980986, 3981150-3981201, 3981372-3981442, 3981803-3981924, 3982609-3982742, 3983125-3983285, 3983710-3983802, 3983957-3984112, 3985347-3985519, 3985790-3985985, 3986114-3986152, 3986377-3986507, 3987730-3987831, 3990328-3990412, 3991444-3991537, 3991654-3991734, 3991908-3992004, 3992594-3992711, 3992831-3993010, 3993497-3993661, 3994518-3994793, 3995098-3995239, 3995815-3995972, 3996067-3996195, 3996345-3996476, 3996706-3996890, 3997714-3997889, 3998013-3998115, 3998361-3998746, 3999394-3999452, 4001265-4001300, 4002534-4002665, 4002787-4002853, 4004219-4004361, 4004595-4004656, 4005069-4005096)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042612-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4005069 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:3979366-3979451, 3980495-3980550, 3980895-3980986, 3981150-3981201, 3981372-3981442, 3981803-3981924, 3982609-3982742, 3983125-3983285, 3983710-3983802, 3983957-3984112, 3985347-3985519, 3985790-3985985, 3986114-3986152, 3986377-3986507, 3987730-3987831, 3990328-3990412, 3991444-3991537, 3991654-3991734, 3991908-3992004, 3992594-3992711, 3992831-3993010, 3993497-3993661, 3994518-3994793, 3995098-3995239, 3995815-3995972, 3996067-3996195, 3996345-3996476, 3996706-3996890, 3997714-3997889, 3998013-3998115, 3998361-3998746, 3999394-3999452, 4001265-4001300, 4002534-4002665, 4002787-4002853, 4004219-4004361, 4004595-4004656, 4005069-4005096)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042612-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4717773 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c4731477-4731451, c4728722-4728350, c4723040-4722991, c4717811-4717773, c4717748-4717545, c4711677-4711426, c4710832-4710734, c4710458-4710323, c4709103-4708992, c4707122-4706980, c4706026-4705845)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042689-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c6440152-6440142, c6439448-6439436, c6439324-6439259, c6438841-6438744, c6438522-6438430, c6436963-6436855, c6436614-6436533, c6435990-6435867, c6435480-6435288, c6434841-6434170, c6433925-6433479, c6433334-6433117, c6431743-6431504, c6430596-6430455, c6429477-6429346, c6428317-6428190, c6427881-6427827, c6427643-6427475, c6427131-6426761, c6426285-6426149, c6425634-6425480, c6424215-6424089, c6422706-6422596, c6421737-6421610, c6420703-6420642, c6418673-6418609, c6418428-6418320, c6418113-6417947, c6417519-6417395, c6417271-6417125, c6416277-6416141, c6415942-6415825, c6415534-6415432, c6415241-6415126, c6414805-6414693, c6414530-6414390, c6413418-6413299, c6413023-6412871, c6412564-6412400, c6412282-6412193, c6410984-6410807, c6410698-6410627, c6410466-6410311, c64099...] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042844-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6565452 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c6575564-6575457, c6575304-6575101, c6574909-6574823, c6574547-6574450, c6573409-6573283, c6572927-6572847, c6572483-6572343, c6571900-6571690, c6571509-6571364, c6570943-6570792, c6570252-6570139, c6569915-6569834, c6569724-6569676, c6569499-6569360, c6569258-6569143, c6569021-6568949, c6568783-6568623, c6568295-6568172, c6567894-6567736, c6567641-6567573, c6567397-6567261, c6566864-6566741, c6566476-6566272, c6565967-6565853, c6565584-6565452, c6565308-6565189, c6564977-6564915, c6563566-6563417)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042857-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6598988 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c6617980-6617924, c6616752-6616649, c6616157-6616049, c6615893-6615807, c6615492-6615321, c6615054-6614922, c6614552-6614445, c6614339-6614213, c6613994-6613884, c6613441-6613277, c6612935-6612849, c6612709-6612450, c6612108-6611919, c6611597-6611473, c6610940-6610883, c6610372-6610281, c6610059-6609887, c6609537-6609377, c6609112-6609002, c6608628-6608474, c6607763-6607664, c6607433-6607262, c6606916-6606660, c6606194-6606048, c6605618-6605450, c6605231-6605141, c6605043-6604973, c6603966-6603816, c6602959-6602856, c6601690-6601599, c6601508-6601415, c6600973-6600754, c6600307-6600186, c6599822-6599635, c6599477-6599383, c6599195-6598988, c6598610-6598389, c6598051-6597853, c6596871-6596774, c6596667-6596497, c6596280-6596140, c6595709-6595530, c6595270-6595106, c65948...] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042861-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6815656 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:6815624-6815656, 6815984-6816031, 6816263-6816335, 6816524-6816632, 6816821-6816909, 6817117-6817302, 6819825-6819966, 6823169-6823271, 6824341-6824409, 6825639-6825768, 6826308-6826390)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042885-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c7107678-7107565, c7107413-7107336, c7106923-7106802, c7105701-7105592, c7104597-7104537, c7102987-7102933, c7101935-7101675, c7099520-7099357, c7098290-7098255, c7098222-7098105, c7097403-7097262, c7095373-7095128, c7094229-7094019, c7092362-7091305, c7090606-7090600, c7090290-7090058, c7088503-7087448, c7087340-7087153, c7086873-7086777, c7086430-7086273, c7085981-7085795, c7085643-7085530, c7083999-7083878, c7083399-7082959, c7082756-7082461, c7082236-7082092)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042909-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7275785 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:7266467-7266620, 7267796-7267887, 7268037-7268129, 7268308-7268513, 7268674-7268777, 7268957-7273203, 7273311-7273580, 7273859-7273963, 7274210-7274289, 7274526-7274580, 7274972-7275090, 7275304-7275371, 7275572-7275785, 7275926-7276161, 7276350-7276472, 7276820-7276920)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042925-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7276472 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:7266467-7266620, 7267796-7267887, 7268037-7268129, 7268308-7268513, 7268674-7268777, 7268957-7273203, 7273311-7273580, 7273859-7273963, 7274210-7274289, 7274526-7274580, 7274972-7275090, 7275304-7275371, 7275572-7275785, 7275926-7276161, 7276350-7276472, 7276820-7276920)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042925-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c7426250-7426184, c7425915-7425902, c7423754-7423514, c7422895-7422752, c7422229-7422041, c7421843-7421701, c7421524-7421320, c7420916-7420393)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042946-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7607241 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:7605659-7605779, 7606703-7607241, 7607386-7607949, 7608697-7608828)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042977-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:7851906-7851942, 7853884-7853897, 7855733-7855799, 7857854-7857944, 7858018-7858137, 7858737-7858845)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_042994-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:c8298443-8298393, c8297797-8297690, c8295609-8294996, c8294727-8294447, c8294211-8294183, c8293953-8293940, c8293297-8293183, c8293004-8292918, c8292226-8292092, c8291096-8290890)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_043013-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9918450 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:9917449-9917510, 9917609-9917705, 9918089-9918219, 9918353-9918450, 9920554-9920615, 9920919-9920993, 9921728-9921829)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_043147-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9918450 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:9917643-9917705, 9918089-9918219, 9918353-9918450, 9920554-9920615, 9920919-9920993, 9921728-9921829)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_043147-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9941605 of lcl|scaffold_27 FEATURE: CDS: hypothetical protein [(lcl|scaffold_27:9934881-9934924, 9935353-9935524, 9936126-9936306, 9938763-9938829, 9938996-9939239, 9939517-9939605, 9939986-9940034, 9940522-9940558, 9940670-9940712, 9941533-9941605, 9941718-9941775, 9941938-9941975)] [lcl|scaffold_27: delta, dna len= 10036408] -> [gnl|ncbi|FUN_043149-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 353785 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:347431-347500, 351171-351308, 353177-353274, 353620-353785, 354127-354239, 354400-354577, 355523-355687, 355793-355962, 356200-356291, 356522-356801)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 631675 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:629126-629210, 629564-629718, 629984-630151, 630513-630580, 630767-630925, 631544-631675, 632035-632130, 633175-633520)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1093357 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:1093194-1093357, 1094975-1095310, 1095628-1095693, 1096135-1096214, 1097155-1097266, 1097429-1097462, 1097572-1098053)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1446608 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:1440660-1440772, 1442216-1442337, 1442707-1442893, 1443092-1443177, 1443358-1443459, 1443654-1443722, 1443873-1444030, 1444251-1444405, 1444801-1444955, 1445253-1445486, 1446406-1446608, 1448050-1448684)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1609442 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c1609487-1609442, c1606821-1606559)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1761819 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:1760094-1760210, 1760745-1760800, 1761004-1761158, 1761671-1761819, 1761950-1762015, 1762322-1762435, 1763260-1763451, 1763848-1763982, 1764075-1764150, 1764333-1764361, 1764550-1764649, 1764841-1765092, 1765396-1766001, 1766173-1766237, 1766410-1766446, 1767050-1767103)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1774355 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:1769484-1769637, 1769949-1770015, 1770144-1770236, 1770485-1770544, 1770723-1771005, 1772107-1772177, 1772358-1772404, 1772695-1772858, 1772985-1773093, 1773279-1773318, 1773785-1773974, 1774153-1774171, 1774274-1774355, 1774456-1774539, 1775915-1775972, 1776076-1776164, 1776619-1776727, 1776835-1776869, 1777075-1777208)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1774456 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:1769484-1769637, 1769949-1770015, 1770144-1770236, 1770485-1770544, 1770723-1771005, 1772107-1772177, 1772358-1772404, 1772695-1772858, 1772985-1773093, 1773279-1773318, 1773785-1773974, 1774153-1774171, 1774274-1774355, 1774456-1774539, 1775915-1775972, 1776076-1776164, 1776619-1776727, 1776835-1776869, 1777075-1777208)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2033076 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c2038574-2038441, c2038008-2037861, c2037400-2037267, c2037154-2037055, c2036948-2036761, c2036381-2036259, c2036144-2035938, c2035805-2035725, c2035575-2035303, c2034963-2034694, c2034530-2034344, c2034198-2033800, c2033557-2033341, c2033174-2033076, c2033020-2032759)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2436343 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:2422353-2422584, 2427056-2427185, 2428291-2428375, 2428599-2428637, 2428772-2428813, 2430951-2431485, 2432438-2432565, 2433401-2433573, 2434461-2434518, 2434618-2434705, 2434919-2435002, 2436043-2436343, 2436369-2437243)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2625120 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c2629641-2629514, c2628268-2628099, c2627941-2627840, c2627674-2627474, c2627039-2626842, c2626648-2626501, c2626312-2626218, c2626101-2625971, c2625837-2625701, c2625482-2625391, c2625230-2625120, c2624981-2624599)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2728018 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:2723819-2724361, 2724515-2724576, 2725235-2725323, 2725446-2725489, 2725629-2725745, 2725837-2725962, 2726056-2726217, 2726487-2726611, 2726715-2727198, 2727925-2728018, 2728124-2728140, 2728384-2728506, 2728998-2729126, 2729374-2729496, 2729729-2729857, 2729962-2730090, 2730458-2730588, 2730791-2730917, 2731329-2731452, 2731637-2731758, 2732097-2732357)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3411320 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:3411221-3411320, 3411567-3411688, 3411842-3411929, 3412039-3412119, 3412219-3412356, 3412497-3412658, 3412801-3412913, 3413028-3413091, 3413205-3413272, 3413409-3413634, 3416038-3416125, 3416737-3416813, 3417009-3417062, 3417143-3417283, 3417474-3417551, 3417656-3417741, 3417813-3417878, 3417975-3418057, 3418288-3418426, 3418663-3418875, 3418987-3419044, 3419191-3419254, 3420078-3420261, 3420395-3420485, 3420646-3420786, 3421544-3421681, 3422222-3422332, 3422619-3422729, 3422995-3423099, 3423854-3423949, 3424425-3424557, 3424929-3425130, 3425391-3425859)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3918999 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c3921181-3921029, c3920793-3920694, c3920466-3920403, c3920321-3920227, c3920124-3920020, c3919909-3919805, c3919687-3919604, c3919462-3919313, c3919187-3918999, c3918871-3918686, c3918581-3918375, c3918119-3918027, c3917931-3917818, c3917648-3917472, c3917272-3917088)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4004656 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:3979366-3979451, 3980495-3980550, 3980895-3980986, 3981150-3981201, 3981372-3981442, 3981803-3981924, 3982609-3982742, 3983125-3983285, 3983710-3983802, 3983957-3984112, 3985347-3985519, 3985790-3985985, 3986114-3986152, 3986377-3986507, 3987730-3987831, 3990328-3990412, 3991444-3991537, 3991654-3991734, 3991908-3992004, 3992594-3992711, 3992831-3993010, 3993497-3993661, 3994518-3994793, 3995098-3995239, 3995815-3995972, 3996067-3996195, 3996345-3996476, 3996706-3996890, 3997714-3997889, 3998013-3998115, 3998361-3998746, 3999394-3999452, 4001265-4001300, 4002534-4002665, 4002787-4002853, 4004219-4004361, 4004595-4004656, 4005069-4005122, 4005311-4006242)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4005069 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:3979366-3979451, 3980495-3980550, 3980895-3980986, 3981150-3981201, 3981372-3981442, 3981803-3981924, 3982609-3982742, 3983125-3983285, 3983710-3983802, 3983957-3984112, 3985347-3985519, 3985790-3985985, 3986114-3986152, 3986377-3986507, 3987730-3987831, 3990328-3990412, 3991444-3991537, 3991654-3991734, 3991908-3992004, 3992594-3992711, 3992831-3993010, 3993497-3993661, 3994518-3994793, 3995098-3995239, 3995815-3995972, 3996067-3996195, 3996345-3996476, 3996706-3996890, 3997714-3997889, 3998013-3998115, 3998361-3998746, 3999394-3999452, 4001265-4001300, 4002534-4002665, 4002787-4002853, 4004219-4004361, 4004595-4004656, 4005069-4005122, 4005311-4006242)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4717773 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c4731477-4731451, c4728722-4728350, c4723040-4722991, c4717811-4717773, c4717748-4717545, c4711677-4711426, c4710832-4710734, c4710458-4710323, c4709103-4708992, c4707122-4706980, c4706026-4705615)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6565452 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c6575564-6575457, c6575304-6575101, c6574909-6574823, c6574547-6574450, c6573409-6573283, c6572927-6572847, c6572483-6572343, c6571900-6571690, c6571509-6571364, c6570943-6570792, c6570252-6570139, c6569915-6569834, c6569724-6569676, c6569499-6569360, c6569258-6569143, c6569021-6568949, c6568783-6568623, c6568295-6568172, c6567894-6567736, c6567641-6567573, c6567397-6567261, c6566864-6566741, c6566476-6566272, c6565967-6565853, c6565584-6565452, c6565308-6565189, c6564977-6564915, c6563566-6563417)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6598988 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c6617980-6617924, c6616752-6616649, c6616157-6616049, c6615893-6615807, c6615492-6615321, c6615054-6614922, c6614552-6614445, c6614339-6614213, c6613994-6613884, c6613441-6613277, c6612935-6612849, c6612709-6612450, c6612108-6611919, c6611597-6611473, c6610940-6610883, c6610372-6610281, c6610059-6609887, c6609537-6609377, c6609112-6609002, c6608628-6608474, c6607763-6607664, c6607433-6607262, c6606916-6606660, c6606194-6606048, c6605618-6605450, c6605231-6605141, c6605043-6604973, c6603966-6603816, c6602959-6602856, c6601690-6601599, c6601508-6601415, c6600973-6600754, c6600307-6600186, c6599822-6599635, c6599477-6599383, c6599195-6598988, c6598610-6598389, c6598051-6597853, c6596871-6596774, c6596667-6596497, c6596280-6596140, c6595709-6595530, c6595270-6595106, c65948...] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6742223 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:6738864-6738878, 6739580-6739688, 6740070-6740156, 6741658-6741735, 6742152-6742223, 6742265-6744375)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6742265 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:6738864-6738878, 6739580-6739688, 6740070-6740156, 6741658-6741735, 6742152-6742223, 6742265-6744375)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6815656 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:6815609-6815656, 6815984-6816031, 6816263-6816335, 6816524-6816632, 6816821-6816909, 6817117-6817302, 6819825-6819966, 6823169-6823271, 6824341-6824409, 6825639-6825768, 6826308-6826390)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7275785 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:7266467-7266620, 7267796-7267887, 7268037-7268129, 7268308-7268513, 7268674-7268777, 7268957-7273203, 7273311-7273580, 7273859-7273963, 7274210-7274289, 7274526-7274580, 7274972-7275090, 7275304-7275371, 7275572-7275785, 7275926-7276161, 7276350-7276472, 7276820-7277492)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7276472 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:7266467-7266620, 7267796-7267887, 7268037-7268129, 7268308-7268513, 7268674-7268777, 7268957-7273203, 7273311-7273580, 7273859-7273963, 7274210-7274289, 7274526-7274580, 7274972-7275090, 7275304-7275371, 7275572-7275785, 7275926-7276161, 7276350-7276472, 7276820-7277492)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7607241 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:7605653-7605779, 7606703-7607241, 7607386-7607949, 7608697-7610060)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9882737 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c9888706-9888617, c9885527-9882737, c9882672-9882494)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9882672 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:c9888706-9888617, c9885527-9882737, c9882672-9882494)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9918450 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:9917075-9917510, 9917609-9917705, 9918089-9918219, 9918353-9918450, 9920554-9920615, 9920919-9920993, 9921728-9921942)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9918450 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:9917545-9917705, 9918089-9918219, 9918353-9918450, 9920554-9920615, 9920919-9920993, 9921728-9921942)] [lcl|scaffold_27: delta, dna len= 10036408]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9941605 of lcl|scaffold_27 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_27:9934881-9934924, 9935353-9935524, 9936126-9936306, 9938763-9938829, 9938996-9939239, 9939517-9939605, 9939986-9940034, 9940522-9940558, 9940670-9940712, 9941533-9941605, 9941718-9941775, 9941938-9942065)] [lcl|scaffold_27: delta, dna len= 10036408]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6285 of lcl|scaffold_52 FEATURE: CDS: hypothetical protein [(lcl|scaffold_52:5975-6083, 6242-6285, 6561-6625, 6930-7104)] [lcl|scaffold_52: delta, dna len= 27771] -> [gnl|ncbi|FUN_044463-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6561 of lcl|scaffold_52 FEATURE: CDS: hypothetical protein [(lcl|scaffold_52:5975-6083, 6242-6285, 6561-6625, 6930-7104)] [lcl|scaffold_52: delta, dna len= 27771] -> [gnl|ncbi|FUN_044463-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6285 of lcl|scaffold_52 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_52:5173-5474, 5954-6083, 6242-6285, 6561-6625, 6930-7157)] [lcl|scaffold_52: delta, dna len= 27771]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6561 of lcl|scaffold_52 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_52:5173-5474, 5954-6083, 6242-6285, 6561-6625, 6930-7157)] [lcl|scaffold_52: delta, dna len= 27771]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_67:c15388-14784, c14461-14284, c12957-12887, c12745-12663, c12494-11916, c11646-11065, c8742-8131, c7905-7282, c7069-6755, c6652-6470, c6303-5695, c5549-5215, c5107-5029, c4821-4676, c4580-4488, c4353-4300, c4191-4120, c3998-3972, c3881-3837, c3570-3517, c3420-3358, c3199-3134, c3032-2979, c2676-2641, c1831-1769, c759-697, c90-<27)] [lcl|scaffold_67: raw, dna len= 25000] -> [gnl|ncbi|FUN_044535-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 27 of lcl|scaffold_67 FEATURE: CDS: hypothetical protein [(lcl|scaffold_67:c15388-14784, c14461-14284, c12957-12887, c12745-12663, c12494-11916, c11646-11065, c8742-8131, c7905-7282, c7069-6755, c6652-6470, c6303-5695, c5549-5215, c5107-5029, c4821-4676, c4580-4488, c4353-4300, c4191-4120, c3998-3972, c3881-3837, c3570-3517, c3420-3358, c3199-3134, c3032-2979, c2676-2641, c1831-1769, c759-697, c90-<27)] [lcl|scaffold_67: raw, dna len= 25000] -> [gnl|ncbi|FUN_044535-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_67:c>24883-24262, c24145-23558, c23424-22813, c22229-21565)] [lcl|scaffold_67: raw, dna len= 25000] -> [gnl|ncbi|FUN_044537-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 24883 of lcl|scaffold_67 FEATURE: CDS: hypothetical protein [(lcl|scaffold_67:c>24883-24262, c24145-23558, c23424-22813, c22229-21565)] [lcl|scaffold_67: raw, dna len= 25000] -> [gnl|ncbi|FUN_044537-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 27 of lcl|scaffold_67 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_67:c15388-14784, c14461-14284, c12957-12887, c12745-12663, c12494-11916, c11646-11065, c8742-8131, c7905-7282, c7069-6755, c6652-6470, c6303-5695, c5549-5215, c5107-5029, c4821-4676, c4580-4488, c4353-4300, c4191-4120, c3998-3972, c3881-3837, c3570-3517, c3420-3358, c3199-3134, c3032-2979, c2676-2641, c1831-1769, c759-697, c90-<27)] [lcl|scaffold_67: raw, dna len= 25000]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_67:c>24885-24262, c24145-23558, c23424-22813, c22229-21565)] [lcl|scaffold_67: raw, dna len= 25000]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_112:c>14285-14028, c13188-13069, c12624-12608, c9653-9383, c9124-9095)] [lcl|scaffold_112: raw, dna len= 14963] -> [gnl|ncbi|FUN_044652-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14285 of lcl|scaffold_112 FEATURE: CDS: hypothetical protein [(lcl|scaffold_112:c>14285-14028, c13188-13069, c12624-12608, c9653-9383, c9124-9095)] [lcl|scaffold_112: raw, dna len= 14963] -> [gnl|ncbi|FUN_044652-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_112:c>14286-14028, c13188-13069, c12624-12608, c9653-9383, c9124-9095)] [lcl|scaffold_112: raw, dna len= 14963]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 14286 of lcl|scaffold_112 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_112:c>14286-14028, c13188-13069, c12624-12608, c9653-9383, c9124-9095)] [lcl|scaffold_112: raw, dna len= 14963]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_117:5804-5834, 6064-6201, 6843-6929, 7835-7997, 8132-8231, 9249-9374, 12062-12208, 12409-12522, 13541-13677, 14650->14795)] [lcl|scaffold_117: raw, dna len= 14828] -> [gnl|ncbi|FUN_044663-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14795 of lcl|scaffold_117 FEATURE: CDS: hypothetical protein [(lcl|scaffold_117:5804-5834, 6064-6201, 6843-6929, 7835-7997, 8132-8231, 9249-9374, 12062-12208, 12409-12522, 13541-13677, 14650->14795)] [lcl|scaffold_117: raw, dna len= 14828] -> [gnl|ncbi|FUN_044663-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 14795 of lcl|scaffold_117 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_117:5804-5834, 6064-6201, 6843-6929, 7835-7997, 8132-8231, 9249-9374, 12062-12208, 12409-12522, 13541-13677, 14650->14795)] [lcl|scaffold_117: raw, dna len= 14828]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_137:c7844-7723, c7037-6929, c6538-6346, c5779-5694, c4713-4630, c4340-4328, c4221-4209, c4086-3941, c3453-3275, c3111-3039, c2823-2747, c2639-2585, c2359-2279, c1086-<946)] [lcl|scaffold_137: raw, dna len= 13106] -> [gnl|ncbi|FUN_044690-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_137:8970-9060, 9355-9515, 11770-11875, 12454-12785, 12948->12984)] [lcl|scaffold_137: raw, dna len= 13106] -> [gnl|ncbi|FUN_044691-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12984 of lcl|scaffold_137 FEATURE: CDS: hypothetical protein [(lcl|scaffold_137:8970-9060, 9355-9515, 11770-11875, 12454-12785, 12948->12984)] [lcl|scaffold_137: raw, dna len= 13106] -> [gnl|ncbi|FUN_044691-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12984 of lcl|scaffold_137 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_137:8871-9060, 9355-9515, 11770-11875, 12454-12785, 12948->12984)] [lcl|scaffold_137: raw, dna len= 13106]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_162:<363-467, 761-880, 3730-3828, 4372-4524, 6363-6451, 8191-8280, 10598-10642, 11378-11648)] [lcl|scaffold_162: delta, dna len= 11713] -> [gnl|ncbi|FUN_044731-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 363 of lcl|scaffold_162 FEATURE: CDS: hypothetical protein [(lcl|scaffold_162:<363-467, 761-880, 3730-3828, 4372-4524, 6363-6451, 8191-8280, 10598-10642, 11378-11648)] [lcl|scaffold_162: delta, dna len= 11713] -> [gnl|ncbi|FUN_044731-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 363 of lcl|scaffold_162 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_162:<363-467, 761-880, 3730-3828, 4372-4524, 6363-6451, 8191-8280, 10598-10642, 11378-11648)] [lcl|scaffold_162: delta, dna len= 11713]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_272:c8384-8229, c7850-7713, c5554-5401, c5325-5218, c5117-4992, c3818-3800, c3440-3323, c2637-2437, c751-<554)] [lcl|scaffold_272: raw, dna len= 8728] -> [gnl|ncbi|FUN_044868-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 554 of lcl|scaffold_272 FEATURE: CDS: hypothetical protein [(lcl|scaffold_272:c8384-8229, c7850-7713, c5554-5401, c5325-5218, c5117-4992, c3818-3800, c3440-3323, c2637-2437, c751-<554)] [lcl|scaffold_272: raw, dna len= 8728] -> [gnl|ncbi|FUN_044868-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 554 of lcl|scaffold_272 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_272:c8386-8229, c7850-7713, c5554-5401, c5325-5218, c5117-4992, c3818-3800, c3440-3323, c2637-2437, c751-<554)] [lcl|scaffold_272: raw, dna len= 8728]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_307:7353-7355, 7528-7693, 8019->8181)] [lcl|scaffold_307: delta, dna len= 8317] -> [gnl|ncbi|FUN_044903-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8181 of lcl|scaffold_307 FEATURE: CDS: hypothetical protein [(lcl|scaffold_307:7353-7355, 7528-7693, 8019->8181)] [lcl|scaffold_307: delta, dna len= 8317] -> [gnl|ncbi|FUN_044903-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8181 of lcl|scaffold_307 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_307:7353-7355, 7528-7693, 8019->8181)] [lcl|scaffold_307: delta, dna len= 8317]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_337:<222-312, 689-777, 1461-1680, 1817-1939, 2107-2272, 4713-4798, 5023-5117)] [lcl|scaffold_337: raw, dna len= 8001] -> [gnl|ncbi|FUN_044940-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 222 of lcl|scaffold_337 FEATURE: CDS: hypothetical protein [(lcl|scaffold_337:<222-312, 689-777, 1461-1680, 1817-1939, 2107-2272, 4713-4798, 5023-5117)] [lcl|scaffold_337: raw, dna len= 8001] -> [gnl|ncbi|FUN_044940-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 222 of lcl|scaffold_337 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_337:<222-312, 689-777, 1461-1680, 1817-1939, 2107-2272, 4713-4798, 5023-5141)] [lcl|scaffold_337: raw, dna len= 8001]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_382:<300-485, 1714-1837, 2177-2340, 2708-2809, 3391-3540, 3750-3900, 4104-4228, 4407-4519, 5719-5853, 6246-6376, 6740-6876, 7004->7137)] [lcl|scaffold_382: raw, dna len= 7511] -> [gnl|ncbi|FUN_044979-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 300 of lcl|scaffold_382 FEATURE: CDS: hypothetical protein [(lcl|scaffold_382:<300-485, 1714-1837, 2177-2340, 2708-2809, 3391-3540, 3750-3900, 4104-4228, 4407-4519, 5719-5853, 6246-6376, 6740-6876, 7004->7137)] [lcl|scaffold_382: raw, dna len= 7511] -> [gnl|ncbi|FUN_044979-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_382:<298-485, 1714-1837, 2177-2340, 2708-2809, 3391-3540, 3750-3900, 4104-4228, 4407-4519, 5719-5853, 6246-6376, 6740-6876, 7004->7137)] [lcl|scaffold_382: raw, dna len= 7511]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_527:<125-343, 630-780, 2249-2413, 2541-2768, 2990-3149, 4769-5018, 5403-5565, 5808->5909)] [lcl|scaffold_527: raw, dna len= 6091] -> [gnl|ncbi|FUN_045103-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 125 of lcl|scaffold_527 FEATURE: CDS: hypothetical protein [(lcl|scaffold_527:<125-343, 630-780, 2249-2413, 2541-2768, 2990-3149, 4769-5018, 5403-5565, 5808->5909)] [lcl|scaffold_527: raw, dna len= 6091] -> [gnl|ncbi|FUN_045103-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_527:<124-343, 630-780, 2249-2413, 2541-2768, 2990-3149, 4769-5018, 5403-5565, 5808->5909)] [lcl|scaffold_527: raw, dna len= 6091]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_537:c>6005-5846, c5627-5529, c5416-5310, c5069-4919, c4596-4513, c3924-3772, c3168-3016, c2700-2568, c1648-1586, c764-652, c191-<35)] [lcl|scaffold_537: raw, dna len= 6019] -> [gnl|ncbi|FUN_045109-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 35 of lcl|scaffold_537 FEATURE: CDS: hypothetical protein [(lcl|scaffold_537:c>6005-5846, c5627-5529, c5416-5310, c5069-4919, c4596-4513, c3924-3772, c3168-3016, c2700-2568, c1648-1586, c764-652, c191-<35)] [lcl|scaffold_537: raw, dna len= 6019] -> [gnl|ncbi|FUN_045109-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_537:c>6007-5846, c5627-5529, c5416-5310, c5069-4919, c4596-4513, c3924-3772, c3168-3016, c2700-2568, c1648-1586, c764-652, c191-<35)] [lcl|scaffold_537: raw, dna len= 6019]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6007 of lcl|scaffold_537 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_537:c>6007-5846, c5627-5529, c5416-5310, c5069-4919, c4596-4513, c3924-3772, c3168-3016, c2700-2568, c1648-1586, c764-652, c191-<35)] [lcl|scaffold_537: raw, dna len= 6019]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 35 of lcl|scaffold_537 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_537:c>6007-5846, c5627-5529, c5416-5310, c5069-4919, c4596-4513, c3924-3772, c3168-3016, c2700-2568, c1648-1586, c764-652, c191-<35)] [lcl|scaffold_537: raw, dna len= 6019]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_582:c762-587, c230-<23)] [lcl|scaffold_582: raw, dna len= 5621] -> [gnl|ncbi|FUN_045143-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 23 of lcl|scaffold_582 FEATURE: CDS: hypothetical protein [(lcl|scaffold_582:c762-587, c230-<23)] [lcl|scaffold_582: raw, dna len= 5621] -> [gnl|ncbi|FUN_045143-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 23 of lcl|scaffold_582 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_582:c762-587, c230-<23)] [lcl|scaffold_582: raw, dna len= 5621]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_592:216-367, 661-708, 864-951, 1387-1461, 1625-1734, 1780->1811)] [lcl|scaffold_592: raw, dna len= 5571] -> [gnl|ncbi|FUN_045154-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1811 of lcl|scaffold_592 FEATURE: CDS: hypothetical protein [(lcl|scaffold_592:216-367, 661-708, 864-951, 1387-1461, 1625-1734, 1780->1811)] [lcl|scaffold_592: raw, dna len= 5571] -> [gnl|ncbi|FUN_045154-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1811 of lcl|scaffold_592 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_592:216-367, 661-708, 864-951, 1387-1461, 1625-1734, 1780->1811)] [lcl|scaffold_592: raw, dna len= 5571]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_612:c>4788-4671, c4259-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417] -> [gnl|ncbi|FUN_045169-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4788 of lcl|scaffold_612 FEATURE: CDS: hypothetical protein [(lcl|scaffold_612:c>4788-4671, c4259-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417] -> [gnl|ncbi|FUN_045169-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_612:c>4380-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417] -> [gnl|ncbi|FUN_045169-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4380 of lcl|scaffold_612 FEATURE: CDS: hypothetical protein [(lcl|scaffold_612:c>4380-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417] -> [gnl|ncbi|FUN_045169-T2]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_612:c>4789-4671, c4259-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4789 of lcl|scaffold_612 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_612:c>4789-4671, c4259-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_612:c>4381-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4381 of lcl|scaffold_612 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_612:c>4381-4132, c2811-2713, c865-715, c170-<1)] [lcl|scaffold_612: delta, dna len= 5417]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_627:c>5174-5113, c4152-4041, c3490-3287, c2776-2688, c2321-2235, c663-<531)] [lcl|scaffold_627: delta, dna len= 5323]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_647:c>2001-1823, c1283-1028, c445-<294)] [lcl|scaffold_647: delta, dna len= 5167] -> [gnl|ncbi|FUN_045197-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 294 of lcl|scaffold_647 FEATURE: CDS: hypothetical protein [(lcl|scaffold_647:c>2001-1823, c1283-1028, c445-<294)] [lcl|scaffold_647: delta, dna len= 5167] -> [gnl|ncbi|FUN_045197-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 294 of lcl|scaffold_647 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_647:c>2001-1823, c1283-1028, c445-<294)] [lcl|scaffold_647: delta, dna len= 5167]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_662:c>4071-3850, c3340-3230, c3138-2944, c2513-2407, c2070-1944, c1598-<1361)] [lcl|scaffold_662: raw, dna len= 5078] -> [gnl|ncbi|FUN_045212-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1361 of lcl|scaffold_662 FEATURE: CDS: hypothetical protein [(lcl|scaffold_662:c>4071-3850, c3340-3230, c3138-2944, c2513-2407, c2070-1944, c1598-<1361)] [lcl|scaffold_662: raw, dna len= 5078] -> [gnl|ncbi|FUN_045212-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_662:c>4073-3850, c3340-3230, c3138-2944, c2513-2407, c2070-1944, c1598-<1361)] [lcl|scaffold_662: raw, dna len= 5078]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4073 of lcl|scaffold_662 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_662:c>4073-3850, c3340-3230, c3138-2944, c2513-2407, c2070-1944, c1598-<1361)] [lcl|scaffold_662: raw, dna len= 5078]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1361 of lcl|scaffold_662 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_662:c>4073-3850, c3340-3230, c3138-2944, c2513-2407, c2070-1944, c1598-<1361)] [lcl|scaffold_662: raw, dna len= 5078]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_847:<2434-2491, 2725-2898, 3288-3370, 4086->4159)] [lcl|scaffold_847: raw, dna len= 4235]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2434 of lcl|scaffold_847 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_847:<2434-2491, 2725-2898, 3288-3370, 4086->4159)] [lcl|scaffold_847: raw, dna len= 4235]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_947:<436-708, 954-1007, 1375-1452, 1552-1917, 2176-2280, 2368-2547, 2633-2731, 3073-3589, 3722->3835)] [lcl|scaffold_947: delta, dna len= 3865] -> [gnl|ncbi|FUN_045396-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_947:<436-708, 954-1007, 1375-1452, 1552-1917, 2176-2280, 2368-2547, 2633-2731, 3073-3589, 3722->3835)] [lcl|scaffold_947: delta, dna len= 3865] -> [gnl|ncbi|FUN_045396-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 436 of lcl|scaffold_947 FEATURE: CDS: hypothetical protein [(lcl|scaffold_947:<436-708, 954-1007, 1375-1452, 1552-1917, 2176-2280, 2368-2547, 2633-2731, 3073-3589, 3722->3835)] [lcl|scaffold_947: delta, dna len= 3865] -> [gnl|ncbi|FUN_045396-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3835 of lcl|scaffold_947 FEATURE: CDS: hypothetical protein [(lcl|scaffold_947:<436-708, 954-1007, 1375-1452, 1552-1917, 2176-2280, 2368-2547, 2633-2731, 3073-3589, 3722->3835)] [lcl|scaffold_947: delta, dna len= 3865] -> [gnl|ncbi|FUN_045396-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_947:<434-708, 954-1007, 1375-1452, 1552-1917, 2176-2280, 2368-2547, 2633-2731, 3073-3589, 3722->3835)] [lcl|scaffold_947: delta, dna len= 3865]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3835 of lcl|scaffold_947 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_947:<434-708, 954-1007, 1375-1452, 1552-1917, 2176-2280, 2368-2547, 2633-2731, 3073-3589, 3722->3835)] [lcl|scaffold_947: delta, dna len= 3865]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1022:c>3493-3208, c3062-2931, c2489-2373, c767-648, c305-<54)] [lcl|scaffold_1022: delta, dna len= 3548] -> [gnl|ncbi|FUN_045432-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3493 of lcl|scaffold_1022 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1022:c>3493-3208, c3062-2931, c2489-2373, c767-648, c305-<54)] [lcl|scaffold_1022: delta, dna len= 3548] -> [gnl|ncbi|FUN_045432-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1022:c>3494-3208, c3062-2931, c2489-2373, c767-648, c305-<54)] [lcl|scaffold_1022: delta, dna len= 3548]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3494 of lcl|scaffold_1022 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1022:c>3494-3208, c3062-2931, c2489-2373, c767-648, c305-<54)] [lcl|scaffold_1022: delta, dna len= 3548]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1097:21-254, 867-968, 1246-1479, 2235-2394, 2713-2772, 2914->3155)] [lcl|scaffold_1097: raw, dna len= 3301] -> [gnl|ncbi|FUN_045472-T3]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3155 of lcl|scaffold_1097 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1097:21-254, 867-968, 1246-1479, 2235-2394, 2713-2772, 2914->3155)] [lcl|scaffold_1097: raw, dna len= 3301] -> [gnl|ncbi|FUN_045472-T3]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3155 of lcl|scaffold_1097 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1097:21-254, 867-968, 1246-1479, 2235-2394, 2713-2772, 2914->3155)] [lcl|scaffold_1097: raw, dna len= 3301]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1107:c>3199-2623, c785-<504)] [lcl|scaffold_1107: delta, dna len= 3278] -> [gnl|ncbi|FUN_045479-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3199 of lcl|scaffold_1107 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1107:c>3199-2623, c785-<504)] [lcl|scaffold_1107: delta, dna len= 3278] -> [gnl|ncbi|FUN_045479-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1107:c>3200-2623, c785-<504)] [lcl|scaffold_1107: delta, dna len= 3278]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3200 of lcl|scaffold_1107 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1107:c>3200-2623, c785-<504)] [lcl|scaffold_1107: delta, dna len= 3278]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1232:<1072-1131, 1450-1569, 2425->2529)] [lcl|scaffold_1232: raw, dna len= 2907] -> [gnl|ncbi|FUN_045534-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1072 of lcl|scaffold_1232 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1232:<1072-1131, 1450-1569, 2425->2529)] [lcl|scaffold_1232: raw, dna len= 2907] -> [gnl|ncbi|FUN_045534-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1072 of lcl|scaffold_1232 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1232:<1072-1131, 1450-1569, 2425->2529)] [lcl|scaffold_1232: raw, dna len= 2907]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1472:c>999-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370] -> [gnl|ncbi|FUN_045628-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1472:c>999-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370] -> [gnl|ncbi|FUN_045628-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 999 of lcl|scaffold_1472 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1472:c>999-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370] -> [gnl|ncbi|FUN_045628-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10 of lcl|scaffold_1472 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1472:c>999-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370] -> [gnl|ncbi|FUN_045628-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1472:c>1000-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1000 of lcl|scaffold_1472 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1472:c>1000-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10 of lcl|scaffold_1472 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1472:c>1000-943, c497-412, c121-<10)] [lcl|scaffold_1472: delta, dna len= 2370]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1517:c>2163-1960, c1641-1493, c501-<387)] [lcl|scaffold_1517: delta, dna len= 2285] -> [gnl|ncbi|FUN_045647-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 387 of lcl|scaffold_1517 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1517:c>2163-1960, c1641-1493, c501-<387)] [lcl|scaffold_1517: delta, dna len= 2285] -> [gnl|ncbi|FUN_045647-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 387 of lcl|scaffold_1517 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1517:c>2163-1960, c1641-1493, c501-<387)] [lcl|scaffold_1517: delta, dna len= 2285]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1542:<372-417, 714-812, 1226-1308, 1662-1800, 1881-2011)] [lcl|scaffold_1542: raw, dna len= 2246] -> [gnl|ncbi|FUN_045659-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 372 of lcl|scaffold_1542 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1542:<372-417, 714-812, 1226-1308, 1662-1800, 1881-2011)] [lcl|scaffold_1542: raw, dna len= 2246] -> [gnl|ncbi|FUN_045659-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1542:<370-417, 714-812, 1226-1308, 1662-1800, 1881-2011)] [lcl|scaffold_1542: raw, dna len= 2246]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1572:<165-223, 354-599, 1175-1318, 1440->1493)] [lcl|scaffold_1572: raw, dna len= 2200] -> [gnl|ncbi|FUN_045670-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1493 of lcl|scaffold_1572 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1572:<165-223, 354-599, 1175-1318, 1440->1493)] [lcl|scaffold_1572: raw, dna len= 2200] -> [gnl|ncbi|FUN_045670-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1493 of lcl|scaffold_1572 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1572:<165-223, 354-599, 1175-1318, 1440->1493)] [lcl|scaffold_1572: raw, dna len= 2200]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1652:<1494->1656] [lcl|scaffold_1652: delta, dna len= 2089] -> [gnl|ncbi|FUN_045710-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1667:c1991-1861, c1128-<1015)] [lcl|scaffold_1667: delta, dna len= 2076] -> [gnl|ncbi|FUN_045717-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1015 of lcl|scaffold_1667 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1667:c1991-1861, c1128-<1015)] [lcl|scaffold_1667: delta, dna len= 2076] -> [gnl|ncbi|FUN_045717-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1015 of lcl|scaffold_1667 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1667:c2034-1861, c1128-<1015)] [lcl|scaffold_1667: delta, dna len= 2076]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1727:c>707-544, c201-<54)] [lcl|scaffold_1727: raw, dna len= 2000] -> [gnl|ncbi|FUN_045742-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 707 of lcl|scaffold_1727 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1727:c>707-544, c201-<54)] [lcl|scaffold_1727: raw, dna len= 2000] -> [gnl|ncbi|FUN_045742-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 707 of lcl|scaffold_1727 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1727:c>707-544, c201-<54)] [lcl|scaffold_1727: raw, dna len= 2000]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1782:c>1109-1007, c514-93)] [lcl|scaffold_1782: raw, dna len= 1949] -> [gnl|ncbi|FUN_045761-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1109 of lcl|scaffold_1782 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1782:c>1109-1007, c514-93)] [lcl|scaffold_1782: raw, dna len= 1949] -> [gnl|ncbi|FUN_045761-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1109 of lcl|scaffold_1782 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1782:c>1109-1007, c514-93)] [lcl|scaffold_1782: raw, dna len= 1949]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1867:c1726-1616, c1456-1423, c1129-1050, c480-<411)] [lcl|scaffold_1867: delta, dna len= 1837] -> [gnl|ncbi|FUN_045790-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 411 of lcl|scaffold_1867 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1867:c1726-1616, c1456-1423, c1129-1050, c480-<411)] [lcl|scaffold_1867: delta, dna len= 1837] -> [gnl|ncbi|FUN_045790-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 411 of lcl|scaffold_1867 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1867:c1786-1616, c1456-1423, c1129-1050, c480-<411)] [lcl|scaffold_1867: delta, dna len= 1837]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1932:c>1627-<1441] [lcl|scaffold_1932: raw, dna len= 1760] -> [gnl|ncbi|FUN_045813-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1568 of lcl|scaffold_2032 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2032:254-758, 1261->1568)] [lcl|scaffold_2032: raw, dna len= 1650] -> [gnl|ncbi|FUN_045846-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1568 of lcl|scaffold_2032 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2032:118-758, 1261->1568)] [lcl|scaffold_2032: raw, dna len= 1650]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2232:c>1054-919, c709-<574)] [lcl|scaffold_2232: raw, dna len= 1456] -> [gnl|ncbi|FUN_045919-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1054 of lcl|scaffold_2232 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2232:c>1054-919, c709-<574)] [lcl|scaffold_2232: raw, dna len= 1456] -> [gnl|ncbi|FUN_045919-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2232:c>1055-919, c709-<574)] [lcl|scaffold_2232: raw, dna len= 1456]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1055 of lcl|scaffold_2232 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2232:c>1055-919, c709-<574)] [lcl|scaffold_2232: raw, dna len= 1456]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2382:c>1010-896, c673-600, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333] -> [gnl|ncbi|FUN_045968-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2382:c>1010-896, c673-600, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333] -> [gnl|ncbi|FUN_045968-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1010 of lcl|scaffold_2382 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2382:c>1010-896, c673-600, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333] -> [gnl|ncbi|FUN_045968-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 29 of lcl|scaffold_2382 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2382:c>1010-896, c673-600, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333] -> [gnl|ncbi|FUN_045968-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2382:c976-896, c673-605, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333] -> [gnl|ncbi|FUN_045968-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 29 of lcl|scaffold_2382 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2382:c976-896, c673-605, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333] -> [gnl|ncbi|FUN_045968-T2]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2382:c>1011-896, c673-600, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 29 of lcl|scaffold_2382 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2382:c>1011-896, c673-600, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 29 of lcl|scaffold_2382 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2382:c1011-896, c673-605, c519-423, c344-205, c110-<29)] [lcl|scaffold_2382: raw, dna len= 1333]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2477:330-408, 702-880, 1060->1211)] [lcl|scaffold_2477: raw, dna len= 1261] -> [gnl|ncbi|FUN_045995-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1211 of lcl|scaffold_2477 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2477:330-408, 702-880, 1060->1211)] [lcl|scaffold_2477: raw, dna len= 1261] -> [gnl|ncbi|FUN_045995-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1211 of lcl|scaffold_2477 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2477:296-408, 702-880, 1060->1211)] [lcl|scaffold_2477: raw, dna len= 1261]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2727:c>1105-964, c834-709, c552-<361)] [lcl|scaffold_2727: raw, dna len= 1135] -> [gnl|ncbi|FUN_046052-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2727:c>1105-964, c834-709, c552-<361)] [lcl|scaffold_2727: raw, dna len= 1135] -> [gnl|ncbi|FUN_046052-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1105 of lcl|scaffold_2727 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2727:c>1105-964, c834-709, c552-<361)] [lcl|scaffold_2727: raw, dna len= 1135] -> [gnl|ncbi|FUN_046052-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 361 of lcl|scaffold_2727 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2727:c>1105-964, c834-709, c552-<361)] [lcl|scaffold_2727: raw, dna len= 1135] -> [gnl|ncbi|FUN_046052-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2727:c>1107-964, c834-709, c552-<361)] [lcl|scaffold_2727: raw, dna len= 1135]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 361 of lcl|scaffold_2727 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2727:c>1107-964, c834-709, c552-<361)] [lcl|scaffold_2727: raw, dna len= 1135]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2772:c>626-549, c231-<43)] [lcl|scaffold_2772: raw, dna len= 1125] -> [gnl|ncbi|FUN_046063-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 626 of lcl|scaffold_2772 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2772:c>626-549, c231-<43)] [lcl|scaffold_2772: raw, dna len= 1125] -> [gnl|ncbi|FUN_046063-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2772:c>628-549, c231-<43)] [lcl|scaffold_2772: raw, dna len= 1125]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2872:<29-163, 784-1050)] [lcl|scaffold_2872: raw, dna len= 1107] -> [gnl|ncbi|FUN_046086-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 29 of lcl|scaffold_2872 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2872:<29-163, 784-1050)] [lcl|scaffold_2872: raw, dna len= 1107] -> [gnl|ncbi|FUN_046086-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2872:<27-163, 784-1050)] [lcl|scaffold_2872: raw, dna len= 1107]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 27 of lcl|scaffold_2872 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2872:<27-163, 784-1050)] [lcl|scaffold_2872: raw, dna len= 1107]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2957:c>843-630, c212-<102)] [lcl|scaffold_2957: raw, dna len= 1093] -> [gnl|ncbi|FUN_046103-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 102 of lcl|scaffold_2957 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2957:c>843-630, c212-<102)] [lcl|scaffold_2957: raw, dna len= 1093] -> [gnl|ncbi|FUN_046103-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 102 of lcl|scaffold_2957 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2957:c>843-630, c212-<102)] [lcl|scaffold_2957: raw, dna len= 1093]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3067:513-777, 928->1059)] [lcl|scaffold_3067: raw, dna len= 1073] -> [gnl|ncbi|FUN_046126-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1059 of lcl|scaffold_3067 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3067:513-777, 928->1059)] [lcl|scaffold_3067: raw, dna len= 1073] -> [gnl|ncbi|FUN_046126-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1059 of lcl|scaffold_3067 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3067:419-777, 928->1059)] [lcl|scaffold_3067: raw, dna len= 1073]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3152:<29-145, 623-687, 760->860)] [lcl|scaffold_3152: raw, dna len= 1060] -> [gnl|ncbi|FUN_046141-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 29 of lcl|scaffold_3152 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3152:<29-145, 623-687, 760->860)] [lcl|scaffold_3152: raw, dna len= 1060] -> [gnl|ncbi|FUN_046141-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3152:<27-145, 623-687, 760->860)] [lcl|scaffold_3152: raw, dna len= 1060]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3267:c>998-862, c383-<222)] [lcl|scaffold_3267: raw, dna len= 1041] -> [gnl|ncbi|FUN_046165-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 998 of lcl|scaffold_3267 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3267:c>998-862, c383-<222)] [lcl|scaffold_3267: raw, dna len= 1041] -> [gnl|ncbi|FUN_046165-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3267:c>999-862, c383-<222)] [lcl|scaffold_3267: raw, dna len= 1041]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 999 of lcl|scaffold_3267 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3267:c>999-862, c383-<222)] [lcl|scaffold_3267: raw, dna len= 1041]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c889821-889796, c887547-887536, c887413-887146)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004368-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:1476863-1476929, 1477215-1477375, 1477879-1478002, 1478448-1478580, 1478789-1478870, 1478992-1479001, 1479285-1479427, 1479831-1479926, 1480167-1480362, 1480724-1480802, 1481050-1481164, 1481571-1481704, 1481790-1481910, 1482276-1482400, 1482760-1482892)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004433-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:1476803-1476929, 1477215-1477375, 1477879-1478002, 1478448-1478580, 1478789-1478870, 1478992-1479001, 1479285-1479427, 1479831-1479926, 1480167-1480362, 1480724-1480802, 1481050-1481164, 1481571-1481704, 1481790-1481910, 1482276-1482400, 1482760-1482892)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004433-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c1661708-1661619, c1661379-1661344, c1661158-1661096, c1660763-1660701, c1660381-1660349, c1660248-1660212, c1660114-1660103, c1659822-1659329, c1658942-1658840, c1658544-1657843, c1657729-1657633, c1657539-1657484, c1657098-1656838, c1656646-1656572, c1654575-1654519, c1653309-1653124, c1652541-1652501)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004457-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2200053 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:2199940-2200053, 2200242-2200470, 2202071-2202120, 2202612-2202761)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004516-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2948327 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:2942158-2942188, 2943454-2943678, 2943997-2944013, 2944111-2944143, 2944300-2944332, 2944591-2944644, 2945322-2945414, 2945853-2945927, 2946118-2946162, 2946286-2946339, 2946464-2946517, 2946753-2946806, 2946988-2947041, 2947147-2947200, 2947355-2947399, 2947794-2947847, 2948084-2948128, 2948274-2948327, 2948479-2948577, 2948891-2948935, 2949064-2949162, 2949254-2949307, 2949541-2949648, 2949918-2949971, 2950189-2950287, 2950416-2950469, 2950587-2950685, 2950843-2950896, 2951053-2951106, 2951228-2951281, 2951373-2951426, 2951569-2951613, 2951711-2951809, 2951964-2952071, 2952282-2952335, 2952758-2952811, 2952952-2953005, 2953098-2953151, 2953443-2953550, 2953697-2953750, 2953864-2953917, 2954115-2954276, 2954664-2954771, 2955043-2955150, 2955393-2955446, 2955543-2955650,...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004641-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3556670 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c3557022-3556670, c3556648-3556117)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004689-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3751173 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:3743047-3743109, 3744181-3744419, 3744748-3745206, 3745474-3745601, 3746710-3746831, 3747010-3747340, 3747613-3747757, 3748218-3748326, 3748367-3748501, 3748594-3748627, 3749673-3749903, 3750081-3750475, 3750728-3750787, 3751043-3751173, 3751322-3751438, 3751715-3751834, 3752079-3752171, 3752258-3752436, 3752754-3752809, 3752931-3752974, 3753150-3753218, 3753398-3753548, 3753772-3753924)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004706-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4257050 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:4256726-4257050, 4257134-4257171)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004741-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4887618 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:4887273-4887618, 4887891-4888063)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004809-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4887618 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:4886306-4886308, 4887402-4887618, 4887891-4888063)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004809-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:5296880-5297068, 5297245-5297254, 5297463-5297608, 5297785-5297794, 5298544-5298687, 5298726-5298865, 5298931-5299081, 5299749-5299868, 5300004-5300114, 5300331-5300431, 5300528-5300719, 5302269-5302424, 5305851-5305940, 5306440-5306612, 5307012-5307117, 5307503-5307589)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004862-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6026622 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6050701-6050521, c6049993-6049715, c6049628-6049347, c6049265-6048987, c6048878-6048591, c6048489-6048211, c6048125-6047844, c6047742-6047464, c6046918-6046640, c6046400-6046110, c6045985-6045698, c6045481-6045344, c6045244-6044962, c6044876-6044693, c6044581-6044501, c6044387-6044120, c6041927-6041859, c6041441-6041376, c6041167-6041093, c6040745-6040560, c6040383-6040318, c6040076-6039999, c6039673-6039569, c6039369-6039292, c6037684-6037601, c6037478-6037389, c6036677-6036642, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c602770...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004936-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6025084 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6050701-6050521, c6049993-6049715, c6049628-6049347, c6049265-6048987, c6048878-6048591, c6048489-6048211, c6048125-6047844, c6047742-6047464, c6046918-6046640, c6046400-6046110, c6045985-6045698, c6045481-6045344, c6045244-6044962, c6044876-6044693, c6044581-6044501, c6044387-6044120, c6041927-6041859, c6041441-6041376, c6041167-6041093, c6040745-6040560, c6040383-6040318, c6040076-6039999, c6039673-6039569, c6039369-6039292, c6037684-6037601, c6037478-6037389, c6036677-6036642, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c602770...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004936-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6026622 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6035236-6034867, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c601905...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004936-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6025084 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6035236-6034867, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c601905...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004936-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6026622 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6031565-6031481, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c6019054-6018858, c6018768-6018463, c6018376-6018098, c6017998-6017699, c6017528-6017226, c6017126-6016746, c601662...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004936-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6025084 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6031565-6031481, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c6019054-6018858, c6018768-6018463, c6018376-6018098, c6017998-6017699, c6017528-6017226, c6017126-6016746, c601662...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004936-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6162890 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6176102-6174518, c6174095-6174042, c6173510-6173118, c6172997-6172728, c6172618-6172343, c6172232-6172093, c6171942-6171816, c6170796-6170533, c6170119-6169980, c6169891-6169765, c6169675-6169409, c6169299-6169033, c6168921-6168655, c6168572-6168433, c6168327-6168201, c6167412-6167270, c6165971-6165848, c6165584-6165318, c6165205-6165108, c6165003-6164835, c6164749-6164483, c6164309-6164043, c6163918-6163640, c6163517-6163109, c6163014-6162890, c6162796-6162530, c6162352-6162083, c6161973-6161674, c6161588-6161286, c6161166-6160979, c6160884-6160770, c6160663-6160379, c6160293-6160142, c6160032-6159885, c6159750-6159573, c6159471-6159350, c6159266-6158979, c6158851-6158555, c6158427-6158241, c6158094-6157979, c6157875-6157576, c6157427-6157128, c6157017-6156912, c615679...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004939-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6213224 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c6236088-6235998, c6235538-6235335, c6235147-6234860, c6234320-6234235, c6234151-6233925, c6233821-6233566, c6230890-6230825, c6230709-6230451, c6230346-6230280, c6230173-6229952, c6229857-6229715, c6229629-6229460, c6229327-6229097, c6228956-6228715, c6228608-6228388, c6228299-6228135, c6228016-6227848, c6227770-6226071, c6225941-6225660, c6225569-6225303, c6225146-6224874, c6224776-6224513, c6224401-6224141, c6224031-6223771, c6223684-6223421, c6223297-6223037, c6222880-6222620, c6222522-6222262, c6222170-6222029, c6221922-6221754, c6221671-6221440, c6221332-6221048, c6220962-6220837, c6220711-6220523, c6219403-6219359, c6218351-6213224, c6213193-6210952)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_004941-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8091819 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:8083810-8083857, 8084027-8084117, 8084346-8084393, 8085159-8085209, 8087163-8087286, 8087402-8087689, 8088555-8088841, 8090362-8090427, 8090838-8090906, 8091158-8091327, 8091712-8091819, 8092207-8092437)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005128-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8179297 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c8208222-8208178, c8207280-8207170, c8206950-8206843, c8206721-8206617, c8206137-8206033, c8205877-8205773, c8205361-8205257, c8204727-8204623, c8204489-8204382, c8204015-8203899, c8203466-8203365, c8203238-8203131, c8203039-8202935, c8202795-8202697, c8202037-8201933, c8201762-8201655, c8201525-8201412, c8201246-8201049, c8200824-8200717, c8200593-8200495, c8200407-8200303, c8200213-8200106, c8199979-8199668, c8199367-8199161, c8198960-8198856, c8198765-8198658, c8198569-8198258, c8198152-8197946, c8197823-8197719, c8197505-8197398, c8197274-8196963, c8196813-8196607, c8196414-8196310, c8196067-8195960, c8195839-8195528, c8195378-8195172, c8195072-8194968, c8194874-8194767, c8194649-8194338, c8194059-8193853, c8193729-8193625, c8193473-8193366, c8191935-8191624, c819146...] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005136-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9043651 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:9042126-9042316, 9042592-9042842, 9042999-9043143, 9043336-9043446, 9043585-9043651, 9044058-9044183, 9044311-9044491, 9044870-9044993, 9045482-9045635)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005206-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9044183 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:9042126-9042316, 9042592-9042842, 9042999-9043143, 9043336-9043446, 9043585-9043651, 9044058-9044183, 9044311-9044491, 9044870-9044993, 9045482-9045635)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005206-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c9793277-9793249, c9792562-9792391, c9791309-9791299, c9790981-9790911, c9789163-9788994, c9787901-9787891, c9786405-9786312, c9785563-9785477)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005277-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10280963 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:10279782-10279853, 10280414-10280481, 10280852-10280963, 10281120-10281272, 10281518-10281919)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005330-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:<10575893-10576150, 10576343-10576550, 10576663-10576744, 10576833-10577088)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005359-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10575893 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:<10575893-10576150, 10576343-10576550, 10576663-10576744, 10576833-10577088)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005359-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10820443 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c10822599-10822150, c10821722-10821452, c10821305-10821173, c10820961-10820829, c10820649-10820443, c10820142-10819855)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005384-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c>11356599-11356510, c11355367-11355266, c11355042-11354913, c11354295-11354263, c11352654-11352524, c11351265-11351147, c11350396-11350284, c11349454-11349344, c11349205-11349111, c11348296-11348255)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005427-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11356599 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c>11356599-11356510, c11355367-11355266, c11355042-11354913, c11354295-11354263, c11352654-11352524, c11351265-11351147, c11350396-11350284, c11349454-11349344, c11349205-11349111, c11348296-11348255)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005427-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11355266 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c>11356599-11356510, c11355367-11355266, c11355042-11354913, c11354295-11354263, c11352654-11352524, c11351265-11351147, c11350396-11350284, c11349454-11349344, c11349205-11349111, c11348296-11348255)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005427-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11697678 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c11700524-11700493, c11697790-11697678, c11697077-11696972, c11696502-11696425, c11696225-11696153, c11695754-11695652, c11695291-11695116, c11694949-11694827, c11694708-11694625, c11693479-11693380, c11692699-11692578, c11690258-11690181, c11688321-11688241, c11687516-11687346, c11687093-11687015, c11686711-11686626, c11686451-11686383, c11685570-11685508, c11685086-11685051, c11684545-11684349, c11684174-11684065, c11682912-11682832, c11682724-11682644, c11682422-11682220, c11682069-11681986, c11679906-11679730)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005453-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11682220 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c11700524-11700493, c11697790-11697678, c11697077-11696972, c11696502-11696425, c11696225-11696153, c11695754-11695652, c11695291-11695116, c11694949-11694827, c11694708-11694625, c11693479-11693380, c11692699-11692578, c11690258-11690181, c11688321-11688241, c11687516-11687346, c11687093-11687015, c11686711-11686626, c11686451-11686383, c11685570-11685508, c11685086-11685051, c11684545-11684349, c11684174-11684065, c11682912-11682832, c11682724-11682644, c11682422-11682220, c11682069-11681986, c11679906-11679730)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005453-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12748608 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c12750999-12750956, c12750786-12750691, c12750512-12750396, c12750128-12750041, c12749775-12749619, c12748754-12748608, c12746034-12745274)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005546-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12901359 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c12905558-12905481, c12905129-12905008, c12904819-12904668, c12904534-12904407, c12903547-12903370, c12903056-12903001, c12902846-12902724, c12901501-12901359, c12901243-12901190, c12900454-12900310)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_046284-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:13174545-13174584, 13175022-13175119, 13175791-13175894, 13175984-13176176, 13176440-13176499, 13176587-13176717, 13176884-13176898, 13177542-13177691, 13177809-13177906, 13178018-13178064, 13179237-13179329, 13179423-13179591, 13179724-13179824)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005576-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13773088 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c13774683-13774647, c13774090-13774038, c13773925-13773831, c13773510-13773374, c13773279-13773088, c13772991-13772946, c13772660-13772570, c13772139-13772116)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005608-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14319210 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c14328476-14327186, c14326797-14326550, c14326346-14326265, c14326119-14325999, c14325894-14325704, c14325353-14325214, c14325026-14324829, c14324415-14324147, c14324041-14323879, c14320156-14319996, c14319898-14319654, c14319439-14319210, c14319128-14319028, c14318502-14318371, c14318147-14318034, c14317816-14317664, c14317545-14317348, c14317181-14317113, c14316885-14316858)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005651-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14317664 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c14328476-14327186, c14326797-14326550, c14326346-14326265, c14326119-14325999, c14325894-14325704, c14325353-14325214, c14325026-14324829, c14324415-14324147, c14324041-14323879, c14320156-14319996, c14319898-14319654, c14319439-14319210, c14319128-14319028, c14318502-14318371, c14318147-14318034, c14317816-14317664, c14317545-14317348, c14317181-14317113, c14316885-14316858)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005651-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c14781350-14781302, c14781117-14781108, c14780520-14780490, c14779956-14779843, c14778710-14778497, c14777541-14777292, c14776748-14776413, c14775921-14775607, c14775076-14774933, c14774472-14773677)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005689-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15748671 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c15748802-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15740774)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005783-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15742365 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c15748802-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15740774)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005783-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15742365 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c15744447-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15740774)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005783-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15748671 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c15748802-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741586)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005783-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15742365 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c15748802-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741586)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005783-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17307673 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:17304401-17304470, 17304618-17304805, 17304985-17305050, 17305159-17305251, 17306006-17306129, 17306811-17306929, 17307584-17307673, 17307853-17307942, 17309085-17309200, 17309541-17309610, 17309932-17310057, 17310144-17310215, 17310562-17310708, 17311120-17311203, 17311354-17311465, 17313413-17313591, 17314118-17314234, 17314339-17314450, 17314570-17314703, 17314977-17315135, 17316777-17316891, 17317771-17317837, 17317981-17318028, 17319236-17319320, 17319849-17319897, 17320587-17320702, 17320969-17321106, 17321187-17321369, 17321516-17321629, 17321751-17321966, 17322299-17322356, 17322634-17322740, 17323393-17323515, 17323645-17323758, 17325081-17325227, 17325681-17325891, 17326957-17327147, 17327740-17327840, 17328080-17328218, 17328699-17328824)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005978-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17309200 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:17304401-17304470, 17304618-17304805, 17304985-17305050, 17305159-17305251, 17306006-17306129, 17306811-17306929, 17307584-17307673, 17307853-17307942, 17309085-17309200, 17309541-17309610, 17309932-17310057, 17310144-17310215, 17310562-17310708, 17311120-17311203, 17311354-17311465, 17313413-17313591, 17314118-17314234, 17314339-17314450, 17314570-17314703, 17314977-17315135, 17316777-17316891, 17317771-17317837, 17317981-17318028, 17319236-17319320, 17319849-17319897, 17320587-17320702, 17320969-17321106, 17321187-17321369, 17321516-17321629, 17321751-17321966, 17322299-17322356, 17322634-17322740, 17323393-17323515, 17323645-17323758, 17325081-17325227, 17325681-17325891, 17326957-17327147, 17327740-17327840, 17328080-17328218, 17328699-17328824)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_005978-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17843960 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:17840636-17840964, 17841561-17841729, 17841836-17841991, 17842504-17842587, 17842707-17842827, 17842977-17843061, 17843226-17843316, 17843759-17843960, 17844148-17844237, 17844719-17844849, 17844963-17845058, 17845154-17845218, 17845301-17845438, 17845841-17846039)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006046-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17843960 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:17840636-17840964, 17841561-17841729, 17841836-17841991, 17842504-17842587, 17842707-17842827, 17842977-17843061, 17843226-17843316, 17843759-17843960, 17844148-17844237, 17844719-17844849, 17844963-17845058, 17845154-17845218, 17845301-17845438, 17845780-17845840)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006046-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17843960 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:17840636-17840964, 17841561-17841729, 17841836-17841991, 17842504-17842587, 17842707-17842827, 17842977-17843061, 17843226-17843316, 17843759-17843960, 17844148-17844237, 17844719-17844849, 17844963-17845058, 17845154-17845218, 17845301-17845442)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006046-T3]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:17850042-17850113, 17850417-17850511, 17850652-17850725, 17850858-17850871, 17851057-17851109, 17851198-17851246, 17851402-17851522, 17852433-17852539, 17852929-17853014, 17853203-17854031)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006048-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18128081 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:18118888-18118899, 18119404-18119457, 18122431-18122573, 18122867-18122982, 18124756-18124895, 18126257-18126403, 18126754-18126892, 18127340-18127433, 18127988-18128081, 18129402-18129477, 18131461-18132782)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006078-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18129402 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:18118888-18118899, 18119404-18119457, 18122431-18122573, 18122867-18122982, 18124756-18124895, 18126257-18126403, 18126754-18126892, 18127340-18127433, 18127988-18128081, 18129402-18129477, 18131461-18132782)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006078-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18158779 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c18158886-18158779, c18158502-18158391, c18156941-18156851, c18156395-18156321, c18154088-18153824)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006084-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18186374 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:18178370-18178493, 18179321-18179442, 18179711-18179782, 18181460-18181498, 18181743-18181818, 18181906-18181949, 18182528-18182623, 18183331-18183414, 18183508-18183600, 18183823-18183933, 18184187-18184323, 18184485-18184673, 18185107-18185173, 18185614-18185711, 18186293-18186374, 18186468-18186559, 18186784-18186873, 18187742-18187911, 18188320-18188455, 18188992-18189103, 18189251-18189358, 18189502-18189672)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006089-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:18471621-18471711, 18471816-18471828, 18472196-18472432, 18472990-18473161, 18473332-18473456, 18473894-18474068, 18474167-18474280, 18474384-18474494, 18474572-18474697, 18475037-18475240, 18475404-18475574, 18475650-18475860, 18475940-18476021, 18476189-18476249, 18476368-18476529, 18476641-18476745, 18477248-18477409, 18477592-18477795, 18477934-18478175, 18478434-18478590, 18478868-18479065, 18479187-18479393, 18479847-18479993, 18480650-18480850)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006123-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c18667633-18667601, c18667072-18666943, c18666842-18666732, c18666428-18666262, c18666117-18665995, c18665244-18665087, c18664185-18664101, c18663829-18663731, c18663486-18663294, c18663215-18663118, c18662729-18662529, c18662359-18662230, c18662111-18661954, c18661602-18661381, c18661086-18660848, c18660669-18660560, c18660278-18660271, c18660049-18659939, c18659827-18659689, c18659406-18659300, c18659156-18658848)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006145-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19407474 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c19407510-19407474, c19407195-19407010, c19406911-19406809, c19406712-19406619, c19405448-19405363, c19404274-19404186, c19403194-19403172)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006216-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19407474 of lcl|scaffold_3 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3:c19407510-19407474, c19407195-19407010, c19406911-19406809, c19406712-19406619, c19405448-19405363, c19404274-19404186, c19403916-19403894)] [lcl|scaffold_3: delta, dna len= 19972339] -> [gnl|ncbi|FUN_006216-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 947697 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c947701-947697, c947652-947623, c947509-947408, c947222-947065, c946174-946018, c945698-945486, c945241-945146, c944813-944683, c944102-943955, c943708-943039)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1466552 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c1469287-1469231, c1468885-1468661, c1468575-1468204, c1467909-1467293, c1466998-1466552, c1466207-1465925)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1838546 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:1838336-1838546, 1839192-1839310, 1839551-1839646, 1840093-1840248, 1840956-1841144, 1841394-1842277)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2200053 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:2199516-2199637, 2199907-2200053, 2200242-2200470, 2202071-2202120, 2202612-2202761)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2948327 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:2942158-2942188, 2943454-2943678, 2943997-2944013, 2944111-2944143, 2944300-2944332, 2944591-2944644, 2945322-2945414, 2945853-2945927, 2946118-2946162, 2946286-2946339, 2946464-2946517, 2946753-2946806, 2946988-2947041, 2947147-2947200, 2947355-2947399, 2947794-2947847, 2948084-2948128, 2948274-2948327, 2948479-2948577, 2948891-2948935, 2949064-2949162, 2949254-2949307, 2949541-2949648, 2949918-2949971, 2950189-2950287, 2950416-2950469, 2950587-2950685, 2950843-2950896, 2951053-2951106, 2951228-2951281, 2951373-2951426, 2951569-2951613, 2951711-2951809, 2951964-2952071, 2952282-2952335, 2952758-2952811, 2952952-2953005, 2953098-2953151, 2953443-2953550, 2953697-2953750, 2953864-2953917, 2954115-2954276, 2954664-2954771, 2955043-2955150, 2955393-2955446, 2955543-2955650,...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3556670 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c3558856-3556670, c3556648-3555947)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3751173 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:3743047-3743109, 3744181-3744419, 3744748-3745206, 3745474-3745601, 3746710-3746831, 3747010-3747340, 3747613-3747757, 3748218-3748326, 3748367-3748501, 3748594-3748627, 3749673-3749903, 3750081-3750475, 3750728-3750787, 3751043-3751173, 3751322-3751438, 3751715-3751834, 3752079-3752171, 3752258-3752436, 3752754-3752809, 3752931-3752974, 3753150-3753218, 3753398-3753548, 3753772-3753924)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4257050 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:4256361-4257050, 4257134-4257790)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4887618 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:4887133-4887618, 4887891-4888444)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4887618 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:4886260-4886308, 4887402-4887618, 4887891-4888444)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6026622 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6050805-6050521, c6049993-6049715, c6049628-6049347, c6049265-6048987, c6048878-6048591, c6048489-6048211, c6048125-6047844, c6047742-6047464, c6046918-6046640, c6046400-6046110, c6045985-6045698, c6045481-6045344, c6045244-6044962, c6044876-6044693, c6044581-6044501, c6044387-6044120, c6041927-6041859, c6041441-6041376, c6041167-6041093, c6040745-6040560, c6040383-6040318, c6040076-6039999, c6039673-6039569, c6039369-6039292, c6037684-6037601, c6037478-6037389, c6036677-6036642, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c602770...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6025084 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6050805-6050521, c6049993-6049715, c6049628-6049347, c6049265-6048987, c6048878-6048591, c6048489-6048211, c6048125-6047844, c6047742-6047464, c6046918-6046640, c6046400-6046110, c6045985-6045698, c6045481-6045344, c6045244-6044962, c6044876-6044693, c6044581-6044501, c6044387-6044120, c6041927-6041859, c6041441-6041376, c6041167-6041093, c6040745-6040560, c6040383-6040318, c6040076-6039999, c6039673-6039569, c6039369-6039292, c6037684-6037601, c6037478-6037389, c6036677-6036642, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c602770...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6026622 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6035682-6034867, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c601905...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6025084 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6035682-6034867, c6034408-6034358, c6033936-6033544, c6033394-6033125, c6033018-6032743, c6032651-6032512, c6032407-6032281, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c601905...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6026622 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6031739-6031481, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c6019054-6018858, c6018768-6018463, c6018376-6018098, c6017998-6017699, c6017528-6017226, c6017126-6016746, c601662...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6025084 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6031739-6031481, c6031312-6031049, c6030953-6030814, c6030691-6030565, c6030461-6030195, c6030104-6029838, c6029748-6029482, c6029387-6029248, c6029122-6028996, c6028531-6028389, c6028000-6027877, c6027705-6027439, c6027346-6027249, c6027135-6026967, c6026888-6026622, c6026492-6026226, c6026124-6025846, c6025749-6025341, c6025208-6025084, c6024978-6024712, c6024537-6024268, c6024114-6023815, c6023685-6023383, c6023299-6023112, c6023009-6022895, c6022788-6022504, c6022393-6022242, c6022125-6021978, c6021897-6021720, c6021605-6021484, c6021395-6021108, c6021002-6020706, c6020520-6020334, c6020250-6020135, c6020043-6019744, c6019632-6019333, c6019240-6019135, c6019054-6018858, c6018768-6018463, c6018376-6018098, c6017998-6017699, c6017528-6017226, c6017126-6016746, c601662...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6162890 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6177852-6177778, c6176436-6176392, c6176149-6174518, c6174095-6174042, c6173510-6173118, c6172997-6172728, c6172618-6172343, c6172232-6172093, c6171942-6171816, c6170796-6170533, c6170119-6169980, c6169891-6169765, c6169675-6169409, c6169299-6169033, c6168921-6168655, c6168572-6168433, c6168327-6168201, c6167412-6167270, c6165971-6165848, c6165584-6165318, c6165205-6165108, c6165003-6164835, c6164749-6164483, c6164309-6164043, c6163918-6163640, c6163517-6163109, c6163014-6162890, c6162796-6162530, c6162352-6162083, c6161973-6161674, c6161588-6161286, c6161166-6160979, c6160884-6160770, c6160663-6160379, c6160293-6160142, c6160032-6159885, c6159750-6159573, c6159471-6159350, c6159266-6158979, c6158851-6158555, c6158427-6158241, c6158094-6157979, c6157875-6157576, c615742...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6213224 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c6238088-6237879, c6236101-6235998, c6235538-6235335, c6235147-6234860, c6234320-6234235, c6234151-6233925, c6233821-6233566, c6230890-6230825, c6230709-6230451, c6230346-6230280, c6230173-6229952, c6229857-6229715, c6229629-6229460, c6229327-6229097, c6228956-6228715, c6228608-6228388, c6228299-6228135, c6228016-6227848, c6227770-6226071, c6225941-6225660, c6225569-6225303, c6225146-6224874, c6224776-6224513, c6224401-6224141, c6224031-6223771, c6223684-6223421, c6223297-6223037, c6222880-6222620, c6222522-6222262, c6222170-6222029, c6221922-6221754, c6221671-6221440, c6221332-6221048, c6220962-6220837, c6220711-6220523, c6219403-6219359, c6218351-6213224, c6213193-6209785)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8091819 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:8083732-8083857, 8084027-8084117, 8084346-8084393, 8085159-8085209, 8087163-8087286, 8087402-8087689, 8088555-8088841, 8090362-8090427, 8090838-8090906, 8091158-8091327, 8091712-8091819, 8092207-8094329)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8179297 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c8208222-8208178, c8207280-8207170, c8206950-8206843, c8206721-8206617, c8206137-8206033, c8205877-8205773, c8205361-8205257, c8204727-8204623, c8204489-8204382, c8204015-8203899, c8203466-8203365, c8203238-8203131, c8203039-8202935, c8202795-8202697, c8202037-8201933, c8201762-8201655, c8201525-8201412, c8201246-8201049, c8200824-8200717, c8200593-8200495, c8200407-8200303, c8200213-8200106, c8199979-8199668, c8199367-8199161, c8198960-8198856, c8198765-8198658, c8198569-8198258, c8198152-8197946, c8197823-8197719, c8197505-8197398, c8197274-8196963, c8196813-8196607, c8196414-8196310, c8196067-8195960, c8195839-8195528, c8195378-8195172, c8195072-8194968, c8194874-8194767, c8194649-8194338, c8194059-8193853, c8193729-8193625, c8193473-8193366, c8191935-8191624, c819146...] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9043651 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:9042121-9042316, 9042592-9042842, 9042999-9043143, 9043336-9043446, 9043585-9043651, 9044058-9044183, 9044311-9044491, 9044870-9044993, 9045482-9046573)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9044183 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:9042121-9042316, 9042592-9042842, 9042999-9043143, 9043336-9043446, 9043585-9043651, 9044058-9044183, 9044311-9044491, 9044870-9044993, 9045482-9046573)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10280963 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:10279782-10279853, 10280414-10280481, 10280852-10280963, 10281120-10281272, 10281518-10281919)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:<10574864-10574970, 10575999-10576150, 10576343-10576550, 10576663-10576744, 10576833-10577170)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10574864 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:<10574864-10574970, 10575999-10576150, 10576343-10576550, 10576663-10576744, 10576833-10577170)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10575893 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:<10575893-10576150, 10576343-10576550, 10576663-10576744, 10576833-10577170)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10820443 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c10822599-10822150, c10821722-10821452, c10821305-10821173, c10820961-10820829, c10820649-10820443, c10820142-10819165)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c>11356600-11356510, c11355367-11355266, c11355042-11354913, c11354295-11354263, c11352654-11352524, c11351265-11351147, c11350396-11350284, c11349454-11349344, c11349205-11349111, c11348296-11346623)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11355266 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c>11356600-11356510, c11355367-11355266, c11355042-11354913, c11354295-11354263, c11352654-11352524, c11351265-11351147, c11350396-11350284, c11349454-11349344, c11349205-11349111, c11348296-11346623)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11697678 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c11700524-11700493, c11697790-11697678, c11697077-11696972, c11696502-11696425, c11696225-11696153, c11695754-11695652, c11695291-11695116, c11694949-11694827, c11694708-11694625, c11693479-11693380, c11692699-11692578, c11690258-11690181, c11688321-11688241, c11687516-11687346, c11687093-11687015, c11686711-11686626, c11686451-11686383, c11685570-11685508, c11685086-11685051, c11684545-11684349, c11684174-11684065, c11682912-11682832, c11682724-11682644, c11682422-11682220, c11682069-11681986, c11679906-11678387)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11682220 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c11700524-11700493, c11697790-11697678, c11697077-11696972, c11696502-11696425, c11696225-11696153, c11695754-11695652, c11695291-11695116, c11694949-11694827, c11694708-11694625, c11693479-11693380, c11692699-11692578, c11690258-11690181, c11688321-11688241, c11687516-11687346, c11687093-11687015, c11686711-11686626, c11686451-11686383, c11685570-11685508, c11685086-11685051, c11684545-11684349, c11684174-11684065, c11682912-11682832, c11682724-11682644, c11682422-11682220, c11682069-11681986, c11679906-11678387)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12748608 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c12750999-12750956, c12750786-12750691, c12750512-12750396, c12750128-12750041, c12749775-12749619, c12748754-12748608, c12746034-12745136)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12901359 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c12908085-12907869, c12906399-12906247, c12905621-12905481, c12905129-12905008, c12904819-12904668, c12904534-12904407, c12903547-12903370, c12903056-12903001, c12902846-12902724, c12901501-12901359, c12901243-12901190, c12900454-12898984)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13773088 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c13774783-13774647, c13774090-13774038, c13773925-13773831, c13773510-13773374, c13773279-13773088, c13772991-13772946, c13772660-13772570, c13772139-13771861)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14319210 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c14328618-14327186, c14326797-14326550, c14326346-14326265, c14326119-14325999, c14325894-14325704, c14325353-14325214, c14325026-14324829, c14324415-14324147, c14324041-14323879, c14320156-14319996, c14319898-14319654, c14319439-14319210, c14319128-14319028, c14318502-14318371, c14318147-14318034, c14317816-14317664, c14317545-14317348, c14317181-14317113, c14316885-14316858)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14317664 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c14328618-14327186, c14326797-14326550, c14326346-14326265, c14326119-14325999, c14325894-14325704, c14325353-14325214, c14325026-14324829, c14324415-14324147, c14324041-14323879, c14320156-14319996, c14319898-14319654, c14319439-14319210, c14319128-14319028, c14318502-14318371, c14318147-14318034, c14317816-14317664, c14317545-14317348, c14317181-14317113, c14316885-14316858)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15748671 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c15749034-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15739961)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15742365 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c15749034-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15739961)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15748671 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c15749034-15748671, c15745790-15745415, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15739961)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15742365 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c15749034-15748671, c15745790-15745415, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741649, c15741538-15741435, c15740915-15739961)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15748671 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c15749034-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741435, c15740915-15739961)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15742365 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c15749034-15748671, c15745790-15745605, c15744540-15744437, c15743686-15743584, c15743278-15743204, c15743018-15742932, c15742764-15742608, c15742413-15742365, c15742226-15742137, c15742045-15741870, c15741761-15741435, c15740915-15739961)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17307673 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:17304401-17304470, 17304618-17304805, 17304985-17305050, 17305159-17305251, 17306006-17306129, 17306811-17306929, 17307584-17307673, 17307853-17307942, 17309085-17309200, 17309541-17309610, 17309932-17310057, 17310144-17310215, 17310562-17310708, 17311120-17311203, 17311354-17311465, 17313413-17313591, 17314118-17314234, 17314339-17314450, 17314570-17314703, 17314977-17315135, 17316777-17316891, 17317771-17317837, 17317981-17318028, 17319236-17319320, 17319849-17319897, 17320587-17320702, 17320969-17321106, 17321187-17321369, 17321516-17321629, 17321751-17321966, 17322299-17322356, 17322634-17322740, 17323393-17323515, 17323645-17323758, 17325081-17325227, 17325681-17325891, 17326957-17327147, 17327740-17327840, 17328080-17328218, 17328699-17328824)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17309200 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:17304401-17304470, 17304618-17304805, 17304985-17305050, 17305159-17305251, 17306006-17306129, 17306811-17306929, 17307584-17307673, 17307853-17307942, 17309085-17309200, 17309541-17309610, 17309932-17310057, 17310144-17310215, 17310562-17310708, 17311120-17311203, 17311354-17311465, 17313413-17313591, 17314118-17314234, 17314339-17314450, 17314570-17314703, 17314977-17315135, 17316777-17316891, 17317771-17317837, 17317981-17318028, 17319236-17319320, 17319849-17319897, 17320587-17320702, 17320969-17321106, 17321187-17321369, 17321516-17321629, 17321751-17321966, 17322299-17322356, 17322634-17322740, 17323393-17323515, 17323645-17323758, 17325081-17325227, 17325681-17325891, 17326957-17327147, 17327740-17327840, 17328080-17328218, 17328699-17328824)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17843960 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:17839846-17840176, 17840565-17840964, 17841561-17841729, 17841836-17841991, 17842504-17842587, 17842707-17842827, 17842977-17843061, 17843226-17843316, 17843759-17843960, 17844148-17844237, 17844719-17844849, 17844963-17845058, 17845154-17845218, 17845301-17845438, 17845841-17846775)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17843960 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:17839846-17840176, 17840565-17840964, 17841561-17841729, 17841836-17841991, 17842504-17842587, 17842707-17842827, 17842977-17843061, 17843226-17843316, 17843759-17843960, 17844148-17844237, 17844719-17844849, 17844963-17845058, 17845154-17845218, 17845301-17845438, 17845780-17846775)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17843960 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:17839846-17840176, 17840565-17840964, 17841561-17841729, 17841836-17841991, 17842504-17842587, 17842707-17842827, 17842977-17843061, 17843226-17843316, 17843759-17843960, 17844148-17844237, 17844719-17844849, 17844963-17845058, 17845154-17845218, 17845301-17846775)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18128081 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18118865-18118899, 18119404-18119457, 18122431-18122573, 18122867-18122982, 18124756-18124895, 18126257-18126403, 18126754-18126892, 18127340-18127433, 18127988-18128081, 18129402-18129477, 18131461-18132782)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18129402 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18118865-18118899, 18119404-18119457, 18122431-18122573, 18122867-18122982, 18124756-18124895, 18126257-18126403, 18126754-18126892, 18127340-18127433, 18127988-18128081, 18129402-18129477, 18131461-18132782)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18134510 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18134456-18134510, 18134691-18134771, 18136878-18137018, 18138567-18138705, 18139239-18139397, 18139688-18139778, 18139875-18140585)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18158779 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c18159988-18159942, c18158896-18158779, c18158502-18158391, c18156941-18156851, c18156395-18156321, c18154088-18153824)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18186374 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18178370-18178493, 18179321-18179442, 18179711-18179782, 18181460-18181498, 18181743-18181818, 18181906-18181949, 18182528-18182623, 18183331-18183414, 18183508-18183600, 18183823-18183933, 18184187-18184323, 18184485-18184673, 18185107-18185173, 18185614-18185711, 18186293-18186374, 18186468-18186559, 18186784-18186873, 18187742-18187911, 18188320-18188455, 18188992-18189103, 18189251-18189358, 18189502-18189737)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18755042 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18754751-18755042, 18757605-18757761, 18759131-18759252, 18759391-18759465, 18759555-18759692, 18761790-18761900, 18762040-18762135, 18762480-18762542, 18764051-18764167, 18764374-18764443, 18764874-18764961, 18765649-18765742, 18765884-18766077)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18937807 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18926288-18926823, 18927554-18927716, 18928144-18928350, 18928679-18928735, 18930302-18930528, 18931476-18931686, 18932749-18932966, 18933415-18933516, 18933886-18934009, 18934157-18934372, 18934737-18934993, 18935195-18935344, 18935638-18935799, 18935954-18936147, 18936244-18936337, 18936962-18937807, 18937874-18938017)] [lcl|scaffold_3: delta, dna len= 19972339]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 18937874 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:18926288-18926823, 18927554-18927716, 18928144-18928350, 18928679-18928735, 18930302-18930528, 18931476-18931686, 18932749-18932966, 18933415-18933516, 18933886-18934009, 18934157-18934372, 18934737-18934993, 18935195-18935344, 18935638-18935799, 18935954-18936147, 18936244-18936337, 18936962-18937807, 18937874-18938017)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19407474 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c19407992-19407790, c19407526-19407474, c19407195-19407010, c19406911-19406809, c19406712-19406619, c19405448-19405363, c19404274-19404186, c19403194-19402744)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19407474 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c19407885-19407790, c19407526-19407474, c19407195-19407010, c19406911-19406809, c19406712-19406619, c19405448-19405363, c19404274-19404186, c19403916-19403530)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19887893 of lcl|scaffold_3 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3:c19913670-19913647, c19912358-19912234, c19912123-19912009, c19908453-19907902, c19907104-19906998, c19905306-19905171, c19902535-19902396, c19902028-19901537, c19901441-19901408, c19901091-19900255, c19899347-19899224, c19898005-19897762, c19897596-19897501, c19895631-19895538, c19895438-19895383, c19895070-19894928, c19894261-19894067, c19892724-19892567, c19891975-19891852, c19891658-19891361, c19890869-19890662, c19890461-19890325, c19889952-19889829, c19889634-19889161, c19888955-19888764, c19888460-19887893, c19887826-19886807)] [lcl|scaffold_3: delta, dna len= 19972339]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6105 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:5170-5232, 5694-5804, 6051-6105, 6462-6572, 6835-6945, 7135-7245, 8004-8059, 8247-8316, 8771-8991, 9059-9203, 9291-9359, 9465-9601)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014211-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:393170-393652, 394791-394938, 395622-395753, 398546-398696, 399249-399381, 399829-399963, 400314-400417, 401085-401209, 401418-401530, 403055-403186, 404203-404302, 406048-406055, 406394-406561, 406892-407047)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014240-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:993640-993658, 994044-995174, 995600-995612, 997229-997401, 997766-997872, 998324-998440, 999361-999431, 999587-999685, 1000208-1000280)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014281-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:1380026-1380465, 1383101-1383162, 1383811-1384010, 1385002-1385169, 1385675-1385682, 1386237-1386375, 1387443-1387568, 1388094-1388172, 1388491-1388696)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014310-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3069622 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c3070752-3070543, c3070454-3070339, c3070221-3070058, c3069903-3069817, c3069694-3069622, c3069532-3069267, c3068804-3068012, c3067841-3067763)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014436-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3331397 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:3327049-3327077, 3328987-3329147, 3331260-3331397, 3332735-3333346, 3333457-3333683, 3334444-3334599, 3335110-3335292, 3335957-3336076, 3336905-3337066, 3337632-3337822, 3338517-3338709, 3338952-3339111, 3340826-3340853, 3341540-3341732, 3341970-3342129, 3343168-3343344, 3344646-3344728)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014449-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3337066 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:3327049-3327077, 3328987-3329147, 3331260-3331397, 3332735-3333346, 3333457-3333683, 3334444-3334599, 3335110-3335292, 3335957-3336076, 3336905-3337066, 3337632-3337822, 3338517-3338709, 3338952-3339111, 3340826-3340853, 3341540-3341732, 3341970-3342129, 3343168-3343344, 3344646-3344728)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014449-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4194692 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c4195106-4194940, c4194774-4194692, c4194631-4194480)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014523-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c4670955-4670849, c4670184-4669976, c4669184-4669132, c4668267-4668260, c4668152-4668059, c4667970-4667779, c4667657-4667504, c4667125-4667076, c4666983-4666923, c4666547-4666446, c4665993-4665937, c4665854-4665762, c4665628-4665533, c4665044-4664851, c4664770-4664719, c4664576-4664413)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014565-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4704538 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c4739174-4739018, c4737080-4736955, c4735590-4735465, c4734589-4734398, c4734257-4734105, c4733863-4733621, c4733532-4733377, c4733000-4732881, c4732687-4732562, c4732461-4732339, c4731090-4730968, c4730323-4730171, c4728638-4728585, c4728403-4728278, c4727959-4727834, c4727680-4727567, c4727308-4727171, c4727047-4726997, c4726635-4726510, c4726389-4726162, c4725776-4725651, c4725027-4725002, c4724355-4724268, c4723597-4723472, c4722178-4722053, c4721612-4721394, c4721096-4720971, c4719695-4719551, c4718819-4718789, c4717278-4717098, c4715903-4715781, c4715343-4715221, c4714941-4714816, c4713964-4713842, c4713609-4713487, c4713332-4713165, c4712966-4712898, c4712629-4712504, c4711563-4711441, c4711325-4711167, c4710871-4710800, c4710599-4710423, c4708999-4708874, c470875...] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014568-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c4936999-4936973, c4935522-4935370, c4935248-4935151, c4934918-4934832, c4934706-4934598, c4934316-4934105, c4933757-4933601, c4932767-4932528, c4932432-4932184, c4931886-4931873, c4931733-4931670, c4931485-4931392, c4931102-4930954, c4930875-4930762, c4930651-4930517, c4930400-4930344, c4930100-4929873, c4929008-4928908, c4928643-4928587, c4927499-4927419, c4925597-4925384, c4925073-4925005, c4924216-4924123, c4923909-4923760, c4923665-4923511, c4923058-4922969, c4922872-4922722, c4922420-4922138, c4921781-4921607, c4921499-4921419, c4921291-4921139)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014595-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:5131499-5131575, 5131785-5131797, 5132119-5132207, 5132461-5132598, 5133401-5133524, 5133961-5134020, 5135031-5135111, 5137036-5137183, 5137573-5137583)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014616-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5433841 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:5432656-5432674, 5433042-5433218, 5433308-5433427, 5433599-5433681, 5433757-5433841, 5433941-5433998, 5434120-5434253, 5434367-5434416, 5434500-5434673, 5435082-5435192, 5435399-5435539)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014645-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5554891 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c5554938-5554891, c5554461-5554405, c5554248-5554093, c5553389-5553305, c5553186-5553126, c5552983-5552893, c5552756-5552698, c5552424-5552376, c5552285-5552190, c5551436-5551370, c5551099-5551068)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014662-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6161429 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c6164428-6164315, c6163757-6163632, c6161957-6161824, c6161546-6161429, c6161272-6161202, c6161099-6161024, c6160896-6160834, c6160728-6160659, c6160013-6159935, c6159494-6159491)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014744-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6318217 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c6325054-6325009, c6324282-6324185, c6323908-6323777, c6323397-6323251, c6323004-6322950, c6322845-6322715, c6322541-6322300, c6322008-6321794, c6321680-6321516, c6321393-6321295, c6321199-6321142, c6320895-6320721, c6320575-6320457, c6319978-6319880, c6319565-6319446, c6319248-6319144, c6318962-6318598, c6318386-6318217, c6318109-6317978, c6317857-6317750, c6317611-6317424, c6317310-6317177, c6316745-6316654)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014761-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c7378078-7378071, c7376222-7376215, c7375118-7374960, c7372451-7372416, c7371628-7371585)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014839-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7447219 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c7450846-7450715, c7450453-7450281, c7449986-7449899, c7449659-7449556, c7449365-7449256, c7449158-7449018, c7448808-7448513, c7447748-7447658, c7447373-7447219, c7447094-7447012, c7446869-7446733, c7446651-7446563, c7446410-7446267, c7446178-7446002, c7445904-7445791)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014848-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7453212 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c7453248-7453212, c7452465-7452394, c7452299-7452226, c7452137-7452028, c7451919-7451865, c7451758-7451717)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014849-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7483074 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c7486244-7486126, c7485897-7485807, c7485617-7485549, c7485377-7485258, c7485166-7485083, c7484822-7484676, c7484501-7484430, c7484342-7484298, c7484207-7484154, c7483591-7483531, c7483396-7483353, c7483226-7483074, c7482866-7482737, c7482643-7482567, c7482412-7482284, c7482089-7482014, c7481909-7481843, c7481497-7481377)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014855-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7877537 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c7877700-7877537, c7877368-7877142, c7875493-7875384)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014896-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:8056382-8056464, 8058123-8058207, 8059135-8059268, 8059297-8059429, 8059880-8059942, 8062991-8063249, 8063518-8063525, 8064244-8064354)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014914-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c8471493-8471444, c8471388-8471376, c8471096-8470999, c8470726-8470719, c8470370-8470065, c8468683-8468628, c8468375-8468259)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014945-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c8552271-8552253, c8552045-8552034, c8551426-8551144, c8550957-8550824, c8550461-8550380, c8550034-8549871, c8549577-8549456, c8549230-8549113, c8548946-8548797, c8548016-8547824, c8547539-8547415, c8547038-8546883, c8546616-8546483, c8546303-8546155, c8545934-8545822, c8545599-8545505, c8545367-8545278, c8545112-8544930, c8544670-8544263)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014953-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8590351 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c8597789-8597749, c8597481-8597346, c8597191-8597106, c8596935-8596855, c8596760-8596723, c8596588-8596500, c8596223-8596107, c8596008-8595931, c8595836-8595680, c8595449-8595370, c8595275-8595152, c8594906-8594788, c8594679-8594515, c8594252-8594157, c8594055-8593829, c8593726-8593573, c8593458-8593384, c8593255-8593135, c8592932-8592788, c8592409-8592205, c8591814-8591702, c8591454-8591304, c8590829-8590748, c8590471-8590351, c8590259-8590117, c8589962-8589727)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014958-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8599205 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:8598594-8598662, 8598855-8598987, 8599072-8599205, 8599298-8599369, 8599529-8599660, 8599768-8600064, 8600155-8600252, 8600328-8600472, 8600625-8600894)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014959-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8909241 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c8909335-8909241, c8908569-8908496, c8908275-8908159, c8907742-8907512, c8905184-8905018, c8903909-8903816, c8903504-8903369, c8903255-8903144, c8903034-8902975, c8902741-8902697, c8902576-8902462, c8902232-8902098, c8901321-8901305)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014997-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8909241 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c8909335-8909241, c8908569-8908496, c8908275-8908159, c8907742-8907512, c8905184-8905018, c8903909-8903816, c8903504-8903369, c8903255-8903144, c8903034-8902975, c8902741-8902697, c8902576-8902462, c8902232-8902098, c8901326-8901214)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014997-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8909241 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c8909335-8909241, c8908569-8908496, c8908275-8908159, c8907742-8907512, c8905184-8905018, c8903909-8903816, c8903504-8903369, c8903255-8903144, c8903034-8902975, c8902741-8902697, c8902576-8902462, c8902232-8902018)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_014997-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9053263 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c9053926-9053863, c9053311-9053263, c9053108-9052947, c9052664-9052532, c9052157-9052053, c9051562-9051551)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015016-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c9101848-9101802, c9101316-9101310, c9101198-9101133, c9100865-9100781, c9100507-9100352, c9100129-9100009, c9099872-9099694, c9099356-9099275, c9099130-9098950)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015024-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9577967 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c9578593-9578537, c9578432-9578399, c9578131-9577967, c9577821-9577662, c9577526-9577408, c9576940-9576875, c9576781-9576603, c9576525-9576404, c9576231-9576066)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015074-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9651611 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:9640325-9640415, 9640525-9640678, 9643590-9643720, 9643867-9643972, 9644299-9644449, 9646008-9646116, 9646244-9646463, 9647035-9647219, 9647428-9647523, 9648804-9648886, 9649090-9649300, 9649875-9649975, 9650206-9650556, 9651419-9651611, 9651636-9651805, 9653084-9653896, 9654169-9654245, 9654545-9654822, 9654940-9655339, 9655508-9655725, 9655936-9656019, 9657070-9657164)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015077-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9874838 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c9875328-9875202, c9874967-9874838, c9874751-9874634, c9874543-9874439, c9874325-9874195, c9873637-9873403)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015104-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9874751 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c9875328-9875202, c9874967-9874838, c9874751-9874634, c9874543-9874439, c9874325-9874195, c9873637-9873403)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015104-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9900633 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c9902484-9902476, c9901211-9901058, c9900910-9900633, c9900504-9900360, c9900209-9899917)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015110-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10605072 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c10605994-10605878, c10605231-10605072, c10604876-10604746, c10604565-10604499, c10604236-10604193, c10603963-10603822, c10603710-10603632, c10603468-10603393, c10603095-10602982, c10602897-10602804, c10602525-10602320, c10601907-10601764, c10601422-10601342, c10601265-10601194, c10601113-10601063)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015177-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11193943 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:11179691-11179751, 11180640-11180788, 11180902-11181018, 11181150-11181371, 11181565-11181679, 11182024-11182121, 11182472-11182630, 11182881-11182964, 11183363-11183479, 11183961-11184063, 11184888-11184963, 11185319-11185427, 11186031-11186209, 11186534-11186694, 11186866-11186973, 11187191-11187398, 11187659-11187754, 11188063-11188174, 11189897-11190020, 11190225-11190389, 11190799-11190893, 11191673-11191843, 11192385-11192494, 11192859-11193028, 11193841-11193943, 11194626-11194749, 11194933-11195016)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015219-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11194626 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:11179691-11179751, 11180640-11180788, 11180902-11181018, 11181150-11181371, 11181565-11181679, 11182024-11182121, 11182472-11182630, 11182881-11182964, 11183363-11183479, 11183961-11184063, 11184888-11184963, 11185319-11185427, 11186031-11186209, 11186534-11186694, 11186866-11186973, 11187191-11187398, 11187659-11187754, 11188063-11188174, 11189897-11190020, 11190225-11190389, 11190799-11190893, 11191673-11191843, 11192385-11192494, 11192859-11193028, 11193841-11193943, 11194626-11194749, 11194933-11195016)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015219-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11380149 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:11379084-11379166, 11379554-11379735, 11380019-11380149, 11380266-11380484, 11380655-11380733, 11380821-11380923, 11381100-11381315, 11381441-11381570, 11381941-11382128, 11382364-11382488, 11382688-11382779, 11383131-11383229)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015236-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11572346 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:11570323-11570379, 11570836-11570910, 11571087-11571170, 11571512-11571632, 11571746-11571874, 11572187-11572346, 11572501-11572602, 11573252-11573369, 11573621-11573767)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015248-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11782860 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c11784223-11784012, c11783373-11783295, c11783221-11783187, c11783088-11783033, c11782903-11782860, c11782768-11782682, c11782573-11782402, c11782240-11782161, c11782021-11781896, c11781762-11781700, c11781607-11781527, c11781165-11781049, c11780663-11780568)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015267-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:11846308-11846327, 11846505-11846515, 11848425-11848559, 11850659-11850677, 11850827-11850872, 11851006-11851122, 11851345-11851422, 11851600-11851713, 11852183-11852295, 11852550-11852640, 11853029-11853069, 11855194-11855230)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015278-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12327431 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c12331878-12331630, c12331431-12331327, c12331155-12330991, c12330646-12330521, c12330187-12330054, c12329774-12329648, c12329306-12329071, c12328943-12328799, c12328685-12328545, c12328317-12328236, c12328131-12328062, c12327970-12327859, c12327544-12327431, c12327233-12327100, c12326986-12326905, c12326644-12326531, c12326390-12326315, c12326038-12325875, c12325189-12325144, c12324867-12324744, c12322828-12322714, c12321228-12321137, c12321005-12320882, c12320739-12320656, c12320331-12320230)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_046316-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12327431 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c12331878-12331630, c12331431-12331327, c12331155-12330991, c12330646-12330521, c12330187-12330054, c12329774-12329648, c12329306-12329071, c12328943-12328799, c12328685-12328545, c12328317-12328236, c12328131-12328062, c12327970-12327859, c12327544-12327431, c12327233-12327100, c12326986-12326905, c12326644-12326531, c12326390-12326315, c12326038-12325875, c12325189-12325144, c12324867-12324744, c12322828-12322714, c12322479-12322465)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_046316-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12625601 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c12627413-12627332, c12627090-12626943, c12626853-12626775, c12626684-12626638, c12626528-12626426, c12626108-12626029, c12625676-12625601, c12625486-12625393, c12625285-12625038)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015336-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12682193 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:12676805-12676838, 12677281-12677384, 12677689-12677787, 12678136-12678234, 12678388-12678492, 12678742-12678840, 12679022-12679120, 12679222-12679320, 12679657-12679755, 12680460-12680558, 12680831-12680929, 12681411-12681506, 12681629-12681827, 12682062-12682193, 12682434-12682495)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015340-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12693247 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:12687521-12687560, 12687740-12687888, 12688099-12688210, 12689510-12689664, 12689844-12690006, 12690957-12690998, 12691738-12691911, 12692112-12692276, 12692371-12692459, 12692681-12692845, 12692969-12693247, 12693353-12693373, 12693432-12693524, 12693648-12693754, 12693925-12694015)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015342-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12720386 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c12721360-12721254, c12721107-12721019, c12720880-12720762, c12720676-12720574, c12720483-12720386, c12720270-12720121, c12720027-12719845, c12719758-12719689, c12719603-12719525, c12719397-12719244, c12719135-12719031, c12718948-12718916)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015349-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c13157027-13156742, c13155737-13155513, c13155330-13155253, c13155030-13154882, c13154754-13154637, c13154501-13154453, c13153102-13153043, c13152798-13152796, c13151118-13150955, c13150712-13150580, c13150298-13150296, c13150098-13149974, c13149752-13149647, c13148589-13148423, c13146554-13146389, c13146022-13145916, c13145820-13145791, c13145514-13145375, c13144729-13144679, c13143911-13143752, c13143554-13143450, c13143304-13143116, c13142398-13142322)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015391-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13254027 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c13256089-13256004, c13255791-13255143, c13255003-13254837, c13254742-13254553, c13254445-13254304, c13254094-13254027, c13253825-13253688, c13253450-13253340, c13252891-13252784, c13252609-13252379, c13252225-13252076)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015402-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13280514 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:13274827-13274894, 13277042-13277501, 13277892-13278269, 13279967-13280184, 13280406-13280514, 13281241-13281357, 13281804-13282013, 13289516-13289686, 13289824-13289927, 13291517-13291560, 13292200-13292222, 13292382-13292462, 13293799-13293885)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015404-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:13367644-13367715, 13371564-13371675, 13372807-13372891, 13373087-13373178, 13373394-13373468, 13374650-13374658, 13375338-13375546, 13375643-13375750, 13375858-13375955, 13377465-13377696, 13377861-13377935, 13379351-13379533, 13379784-13379949, 13380125-13380921)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015410-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:14602562-14602567, 14602714-14602987, 14603543-14603799, 14603949-14604032, 14604136-14604295, 14605182-14605287, 14606162-14606299, 14606622-14606775, 14608196-14608291, 14608977-14609125, 14609660-14609793, 14610205-14610212, 14610905-14610925, 14611347-14611450, 14612960-14613132, 14614358-14614488, 14614951-14615074, 14615650-14615894, 14617095-14617147, 14617268-14617397)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015484-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c15180079-15180077, c15179776-15179761, c15179012-15179002, c15177878-15177764, c15174895-15174798, c15174678-15174604, c15174439-15174320, c15174221-15174114, c15173645-15173583)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015519-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15212428 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:15204931-15204997, 15206058-15206126, 15206877-15207019, 15207236-15207429, 15207567-15207696, 15207831-15207932, 15208081-15208189, 15208299-15208449, 15208691-15208859, 15208971-15209108, 15209482-15209664, 15209861-15209958, 15210155-15210386, 15210475-15210657, 15211595-15211746, 15211936-15212018, 15212339-15212428, 15212819-15212942, 15213044-15213160, 15213497-15213566, 15213653-15213787, 15214006-15214083)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015523-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15212819 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:15204931-15204997, 15206058-15206126, 15206877-15207019, 15207236-15207429, 15207567-15207696, 15207831-15207932, 15208081-15208189, 15208299-15208449, 15208691-15208859, 15208971-15209108, 15209482-15209664, 15209861-15209958, 15210155-15210386, 15210475-15210657, 15211595-15211746, 15211936-15212018, 15212339-15212428, 15212819-15212942, 15213044-15213160, 15213497-15213566, 15213653-15213787, 15214006-15214083)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015523-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:15502480-15502559, 15503017-15503024, 15503514-15503603, 15503872-15504011)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015552-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15575346 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:15573317-15573365, 15573500-15573673, 15575191-15575346, 15576583-15576641)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015563-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16045045 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c16045122-16045045, c16044717-16044626, c16044454-16044346, c16044178-16044044, c16043938-16043783)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015607-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16161360 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c16163201-16162971, c16161953-16161783, c16161628-16161360, c16160025-16159853, c16159534-16159461, c16157217-16157022, c16156579-16156452, c16154459-16154284, c16153673-16153540, c16153267-16153066, c16151786-16151620, c16150748-16150665, c16149626-16149552, c16148698-16148520, c16147705-16147529, c16146948-16146847, c16146414-16146322, c16145272-16145096, c16144472-16144419)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015624-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c16773481-16773143, c16772904-16772674, c16772560-16772330, c16770281-16770077, c16769812-16769669, c16768831-16768818, c16768439-16768313, c16768176-16768007, c16767763-16767517, c16766641-16766452, c16765041-16764888, c16764084-16763917, c16762964-16762797, c16762701-16762534, c16762208-16762041, c16759641-16759474, c16759010-16758921, c16758717-16758608, c16758321-16758247, c16758154-16758061, c16757963-16757893, c16757450-16757366)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015705-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17667715 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:c17671121-17669490, c17669276-17669182, c17667817-17667715, c17667338-17667237, c17666941-17666793, c17665876-17665738, c17665572-17665353, c17665321-17665299)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015805-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:17791677-17791679, 17791966-17791976, 17792634-17792734, 17792855-17793035, 17793276-17793363, 17793739-17793822, 17793912-17794022, 17794220-17794402, 17794502-17794612, 17795210-17795258, 17795450-17795625)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015818-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18106375 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:18103464-18103555, 18103749-18103852, 18105162-18105216, 18106344-18106375, 18107609-18107742, 18108148-18108226, 18108430-18108569)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015851-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18106375 of lcl|scaffold_8 FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:18103464-18103555, 18103749-18103852, 18105162-18105216, 18106344-18106375, 18107609-18107742, 18108148-18108243)] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015851-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_8:18135497-18135699, 18135892-18136019, 18136135-18136265, 18136452-18136649, 18137973-18137986, 18138595-18138709, 18141210-18141429, 18141514-18141727, 18142356-18142530, 18142665-18142772, 18142898-18142976, 18143055-18143164, 18143276-18143536, 18144793-18144892, 18145418-18145602, 18145818-18145966, 18146305-18146396, 18146515-18146678, 18146768-18146944, 18147488-18147613, 18147815-18148015, 18148164-18148368, 18148448-18148552, 18149947-18150103, 18150228-18150471, 18150582-18150678, 18150812-18150977, 18151068-18151157, 18151328-18151479, 18151585-18151685, 18151780-18151906, 18152049-18152126, 18152315-18152487, 18152589-18152704, 18153501-18153668, 18153865-18154123, 18154365-18154553, 18154672-18154984, 18155076-18155187, 18155308-18155455, 18155767-18155981, 18...] [lcl|scaffold_8: delta, dna len= 18638009] -> [gnl|ncbi|FUN_015855-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6105 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:5065-5232, 5694-5804, 6051-6105, 6462-6572, 6835-6945, 7135-7245, 8004-8059, 8247-8316, 8771-8991, 9059-9203, 9291-9359, 9465-11065)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2689763 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:2683858-2684031, 2684449-2684632, 2684969-2685063, 2686355-2686454, 2687200-2687247, 2687752-2688150, 2688521-2688636, 2689536-2689763, 2689885-2690100, 2690451-2690763)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2690100 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:2683858-2684031, 2684449-2684632, 2684969-2685063, 2686355-2686454, 2687200-2687247, 2687752-2688150, 2688521-2688636, 2689536-2689763, 2689885-2690100, 2690451-2690763)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3069622 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c3070752-3070543, c3070454-3070339, c3070221-3070058, c3069903-3069817, c3069694-3069622, c3069532-3069267, c3068804-3068012, c3067841-3067763)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3331397 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:3326625-3327077, 3328987-3329147, 3331260-3331397, 3332735-3333346, 3333457-3333683, 3334444-3334599, 3335110-3335292, 3335957-3336076, 3336905-3337066, 3337632-3337822, 3338517-3338709, 3338952-3339111, 3340826-3340853, 3341540-3341732, 3341970-3342129, 3343168-3343344, 3344646-3345859)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3337066 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:3326625-3327077, 3328987-3329147, 3331260-3331397, 3332735-3333346, 3333457-3333683, 3334444-3334599, 3335110-3335292, 3335957-3336076, 3336905-3337066, 3337632-3337822, 3338517-3338709, 3338952-3339111, 3340826-3340853, 3341540-3341732, 3341970-3342129, 3343168-3343344, 3344646-3345859)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4194692 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c4195500-4195413, c4195107-4194940, c4194774-4194692, c4194631-4194058)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4704538 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c4739174-4739018, c4737080-4736955, c4735590-4735465, c4734589-4734398, c4734257-4734105, c4733863-4733621, c4733532-4733377, c4733000-4732881, c4732687-4732562, c4732461-4732339, c4731090-4730968, c4730323-4730171, c4728638-4728585, c4728403-4728278, c4727959-4727834, c4727680-4727567, c4727308-4727171, c4727047-4726997, c4726635-4726510, c4726389-4726162, c4725776-4725651, c4725027-4725002, c4724355-4724268, c4723597-4723472, c4722178-4722053, c4721612-4721394, c4721096-4720971, c4719695-4719551, c4718819-4718789, c4717278-4717098, c4715903-4715781, c4715343-4715221, c4714941-4714816, c4713964-4713842, c4713609-4713487, c4713332-4713165, c4712966-4712898, c4712629-4712504, c4711563-4711441, c4711325-4711167, c4710871-4710800, c4710599-4710423, c4708999-4708874, c470875...] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5433841 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:5432422-5432487, 5432617-5432674, 5433042-5433218, 5433308-5433427, 5433599-5433681, 5433757-5433841, 5433941-5433998, 5434120-5434253, 5434367-5434416, 5434500-5434673, 5435082-5435192, 5435399-5436126)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5554891 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c5556340-5556092, c5555013-5554891, c5554461-5554405, c5554248-5554093, c5553389-5553305, c5553186-5553126, c5552983-5552893, c5552756-5552698, c5552424-5552376, c5552285-5552190, c5551436-5551370, c5551099-5550476)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6161429 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c6164428-6164315, c6163757-6163632, c6161957-6161824, c6161546-6161429, c6161272-6161202, c6161099-6161024, c6160896-6160834, c6160728-6160659, c6160013-6159935, c6159494-6159491)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6318217 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c6325054-6325009, c6324282-6324185, c6323908-6323777, c6323397-6323251, c6323004-6322950, c6322845-6322715, c6322541-6322300, c6322008-6321794, c6321680-6321516, c6321393-6321295, c6321199-6321142, c6320895-6320721, c6320575-6320457, c6319978-6319880, c6319565-6319446, c6319248-6319144, c6318962-6318598, c6318386-6318217, c6318109-6317978, c6317857-6317750, c6317611-6317424, c6317310-6317177, c6316745-6316609)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7447219 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c7450962-7450715, c7450453-7450281, c7449986-7449899, c7449659-7449556, c7449365-7449256, c7449158-7449018, c7448808-7448513, c7447748-7447658, c7447373-7447219, c7447094-7447012, c7446869-7446733, c7446651-7446563, c7446410-7446267, c7446178-7446002, c7445904-7445481)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7453212 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c7453308-7453212, c7452465-7452394, c7452299-7452226, c7452137-7452028, c7451919-7451865, c7451758-7451373)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7483074 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c7486290-7486126, c7485897-7485807, c7485617-7485549, c7485377-7485258, c7485166-7485083, c7484822-7484676, c7484501-7484430, c7484342-7484298, c7484207-7484154, c7483591-7483531, c7483396-7483353, c7483226-7483074, c7482866-7482737, c7482643-7482567, c7482412-7482284, c7482089-7482014, c7481909-7481843, c7481497-7480028)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7877537 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c7877700-7877537, c7877368-7877142, c7875493-7875384)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8590351 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c8598473-8598426, c8597798-8597749, c8597481-8597346, c8597191-8597106, c8596935-8596855, c8596760-8596723, c8596588-8596500, c8596223-8596107, c8596008-8595931, c8595836-8595680, c8595449-8595370, c8595275-8595152, c8594906-8594788, c8594679-8594515, c8594252-8594157, c8594055-8593829, c8593726-8593573, c8593458-8593384, c8593255-8593135, c8592932-8592788, c8592409-8592205, c8591814-8591702, c8591454-8591304, c8590829-8590748, c8590471-8590351, c8590259-8590117, c8589962-8589084)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8599205 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:8598594-8598662, 8598855-8598987, 8599072-8599205, 8599298-8599369, 8599529-8599660, 8599768-8600064, 8600155-8600252, 8600328-8600472, 8600625-8601211)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8909241 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c8909359-8909241, c8908569-8908496, c8908275-8908159, c8907742-8907512, c8905184-8905018, c8903909-8903816, c8903504-8903369, c8903255-8903144, c8903034-8902975, c8902741-8902697, c8902576-8902462, c8902232-8902098, c8901321-8898210)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8909241 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c8909359-8909241, c8908569-8908496, c8908275-8908159, c8907742-8907512, c8905184-8905018, c8903909-8903816, c8903504-8903369, c8903255-8903144, c8903034-8902975, c8902741-8902697, c8902576-8902462, c8902232-8902098, c8901326-8898210)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8909241 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c8909359-8909241, c8908569-8908496, c8908275-8908159, c8907742-8907512, c8905184-8905018, c8903909-8903816, c8903504-8903369, c8903255-8903144, c8903034-8902975, c8902741-8902697, c8902576-8902462, c8902232-8898210)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9053263 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c9054106-9053863, c9053311-9053263, c9053108-9052947, c9052664-9052532, c9052157-9052053, c9051562-9051551)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9577967 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c9578727-9578537, c9578432-9578399, c9578131-9577967, c9577821-9577662, c9577526-9577408, c9576940-9576875, c9576781-9576603, c9576525-9576404, c9576231-9575898)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9651611 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:9639213-9639360, 9639555-9639661, 9640247-9640415, 9640525-9640678, 9643590-9643720, 9643867-9643972, 9644299-9644449, 9646008-9646116, 9646244-9646463, 9647035-9647219, 9647428-9647523, 9648804-9648886, 9649090-9649300, 9649875-9649975, 9650206-9650556, 9651419-9651611, 9651636-9651805, 9653084-9653896, 9654169-9654245, 9654545-9654822, 9654940-9655339, 9655508-9655725, 9655936-9656019, 9657070-9658823)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9874838 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c9875411-9875202, c9874967-9874838, c9874751-9874634, c9874543-9874439, c9874325-9874195, c9873637-9873403)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9874751 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c9875411-9875202, c9874967-9874838, c9874751-9874634, c9874543-9874439, c9874325-9874195, c9873637-9873403)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9900633 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c9902531-9902476, c9901211-9901058, c9900910-9900633, c9900504-9900360, c9900209-9899613)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10605072 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c10606008-10605878, c10605231-10605072, c10604876-10604746, c10604565-10604499, c10604236-10604193, c10603963-10603822, c10603710-10603632, c10603468-10603393, c10603095-10602982, c10602897-10602804, c10602525-10602320, c10601907-10601764, c10601422-10601342, c10601265-10601194, c10601113-10600053)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11193943 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:11179619-11179751, 11180640-11180788, 11180902-11181018, 11181150-11181371, 11181565-11181679, 11182024-11182121, 11182472-11182630, 11182881-11182964, 11183363-11183479, 11183961-11184063, 11184888-11184963, 11185319-11185427, 11186031-11186209, 11186534-11186694, 11186866-11186973, 11187191-11187398, 11187659-11187754, 11188063-11188174, 11189897-11190020, 11190225-11190389, 11190799-11190893, 11191673-11191843, 11192385-11192494, 11192859-11193028, 11193841-11193943, 11194626-11194749, 11194933-11195591)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11194626 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:11179619-11179751, 11180640-11180788, 11180902-11181018, 11181150-11181371, 11181565-11181679, 11182024-11182121, 11182472-11182630, 11182881-11182964, 11183363-11183479, 11183961-11184063, 11184888-11184963, 11185319-11185427, 11186031-11186209, 11186534-11186694, 11186866-11186973, 11187191-11187398, 11187659-11187754, 11188063-11188174, 11189897-11190020, 11190225-11190389, 11190799-11190893, 11191673-11191843, 11192385-11192494, 11192859-11193028, 11193841-11193943, 11194626-11194749, 11194933-11195591)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11380149 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:11379024-11379166, 11379554-11379735, 11380019-11380149, 11380266-11380484, 11380655-11380733, 11380821-11380923, 11381100-11381315, 11381441-11381570, 11381941-11382128, 11382364-11382488, 11382688-11382779, 11383131-11383229)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11572346 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:11570323-11570379, 11570836-11570910, 11571087-11571170, 11571512-11571632, 11571746-11571874, 11572187-11572346, 11572501-11572602, 11573252-11573369, 11573621-11573767)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11782860 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c11784228-11784012, c11783373-11783295, c11783221-11783187, c11783088-11783033, c11782903-11782860, c11782768-11782682, c11782573-11782402, c11782240-11782161, c11782021-11781896, c11781762-11781700, c11781607-11781527, c11781165-11781049, c11780663-11779719)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12327431 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c12331893-12331630, c12331431-12331327, c12331155-12330991, c12330646-12330521, c12330187-12330054, c12329774-12329648, c12329306-12329071, c12328943-12328799, c12328685-12328545, c12328317-12328236, c12328131-12328062, c12327970-12327859, c12327544-12327431, c12327233-12327100, c12326986-12326905, c12326644-12326531, c12326390-12326315, c12326038-12325875, c12325189-12325144, c12324867-12324744, c12322828-12322714, c12321228-12321137, c12321005-12320882, c12320739-12320656, c12320331-12319659)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12327431 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c12331893-12331630, c12331431-12331327, c12331155-12330991, c12330646-12330521, c12330187-12330054, c12329774-12329648, c12329306-12329071, c12328943-12328799, c12328685-12328545, c12328317-12328236, c12328131-12328062, c12327970-12327859, c12327544-12327431, c12327233-12327100, c12326986-12326905, c12326644-12326531, c12326390-12326315, c12326038-12325875, c12325189-12325144, c12324867-12324744, c12322828-12322714, c12322479-12321630)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12625601 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c12627511-12627332, c12627090-12626943, c12626853-12626775, c12626684-12626638, c12626528-12626426, c12626108-12626029, c12625676-12625601, c12625486-12625393, c12625285-12624663)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12682193 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:12676805-12676838, 12677281-12677384, 12677689-12677787, 12678136-12678234, 12678388-12678492, 12678742-12678840, 12679022-12679120, 12679222-12679320, 12679657-12679755, 12680460-12680558, 12680831-12680929, 12681411-12681506, 12681629-12681827, 12682062-12682193, 12682434-12683325)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12693247 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:12687064-12687184, 12687376-12687560, 12687740-12687888, 12688099-12688210, 12689510-12689664, 12689844-12690006, 12690957-12690998, 12691738-12691911, 12692112-12692276, 12692371-12692459, 12692681-12692845, 12692969-12693247, 12693353-12693373, 12693432-12693524, 12693648-12693754, 12693925-12695074)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12720386 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c12721435-12721254, c12721107-12721019, c12720880-12720762, c12720676-12720574, c12720483-12720386, c12720270-12720121, c12720027-12719845, c12719758-12719689, c12719603-12719525, c12719397-12719244, c12719135-12719031, c12718948-12718789)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13254027 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c13256132-13256004, c13255791-13255143, c13255003-13254837, c13254742-13254553, c13254445-13254304, c13254094-13254027, c13253825-13253688, c13253450-13253340, c13252891-13252784, c13252609-13252379, c13252225-13251958)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13280514 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:13274827-13274894, 13277042-13277501, 13277892-13278269, 13279967-13280184, 13280406-13280514, 13281241-13281357, 13281804-13282013, 13289516-13289686, 13289824-13289927, 13291517-13291560, 13292200-13292222, 13292382-13292462, 13293799-13293885)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15212428 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:15204776-15204997, 15206058-15206126, 15206877-15207019, 15207236-15207429, 15207567-15207696, 15207831-15207932, 15208081-15208189, 15208299-15208449, 15208691-15208859, 15208971-15209108, 15209482-15209664, 15209861-15209958, 15210155-15210386, 15210475-15210657, 15211595-15211746, 15211936-15212018, 15212339-15212428, 15212819-15212942, 15213044-15213160, 15213497-15213566, 15213653-15213787, 15214006-15214228)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15212819 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:15204776-15204997, 15206058-15206126, 15206877-15207019, 15207236-15207429, 15207567-15207696, 15207831-15207932, 15208081-15208189, 15208299-15208449, 15208691-15208859, 15208971-15209108, 15209482-15209664, 15209861-15209958, 15210155-15210386, 15210475-15210657, 15211595-15211746, 15211936-15212018, 15212339-15212428, 15212819-15212942, 15213044-15213160, 15213497-15213566, 15213653-15213787, 15214006-15214228)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15575346 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:15573317-15573365, 15573500-15573673, 15575191-15575346, 15576583-15576641)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16045045 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c16045122-16045045, c16044717-16044626, c16044454-16044346, c16044178-16044044, c16043938-16043783)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16161360 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c16163201-16162971, c16161953-16161783, c16161628-16161360, c16160025-16159853, c16159534-16159461, c16157217-16157022, c16156579-16156452, c16154459-16154284, c16153673-16153540, c16153267-16153066, c16151786-16151620, c16150748-16150665, c16149626-16149552, c16148698-16148520, c16147705-16147529, c16146948-16146847, c16146414-16146322, c16145272-16145096, c16144472-16144419)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c>16517926-16517717, c16517205-16517089, c16514996-16514895, c16512894-16512739, c16512503-16512403, c16511891-16511634, c16511492-16511377, c16511275-16511149, c16510983-16510893, c16509809-16509662, c16508750-16508551, c16507677-16507574, c16507329-16507261, c16507154-16507020, c16506689-16506570, c16506261-16505854, c16505055-16504948, c16504096-16503929, c16503764-16503681, c16502744-16502610, c16502194-16502017, c16501927-16501851, c16501764-16499114)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16517926 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c>16517926-16517717, c16517205-16517089, c16514996-16514895, c16512894-16512739, c16512503-16512403, c16511891-16511634, c16511492-16511377, c16511275-16511149, c16510983-16510893, c16509809-16509662, c16508750-16508551, c16507677-16507574, c16507329-16507261, c16507154-16507020, c16506689-16506570, c16506261-16505854, c16505055-16504948, c16504096-16503929, c16503764-16503681, c16502744-16502610, c16502194-16502017, c16501927-16501851, c16501764-16499114)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c>16517926-16517717, c16517205-16517089, c16514996-16514895, c16512894-16512739, c16512503-16512403, c16511891-16511634, c16511492-16511377, c16511275-16511149, c16510983-16510893, c16509809-16509662, c16508750-16508551, c16507677-16507574, c16507329-16507261, c16507154-16507020, c16505055-16504948, c16503764-16503681, c16503451-16503359, c16502744-16502610, c16502194-16502017, c16501927-16501851, c16501764-16501671, c16499746-16499686, c16499323-16499114)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16517926 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c>16517926-16517717, c16517205-16517089, c16514996-16514895, c16512894-16512739, c16512503-16512403, c16511891-16511634, c16511492-16511377, c16511275-16511149, c16510983-16510893, c16509809-16509662, c16508750-16508551, c16507677-16507574, c16507329-16507261, c16507154-16507020, c16505055-16504948, c16503764-16503681, c16503451-16503359, c16502744-16502610, c16502194-16502017, c16501927-16501851, c16501764-16501671, c16499746-16499686, c16499323-16499114)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17667715 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:c17673748-17673627, c17671168-17669490, c17669276-17669182, c17667817-17667715, c17667338-17667237, c17666941-17666793, c17665876-17665738, c17665572-17665353, c17665321-17665299)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18106375 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:18103464-18103555, 18103749-18103852, 18105162-18105216, 18106344-18106375, 18107609-18107742, 18108148-18108226, 18108430-18109014)] [lcl|scaffold_8: delta, dna len= 18638009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18106375 of lcl|scaffold_8 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_8:18103464-18103555, 18103749-18103852, 18105162-18105216, 18106344-18106375, 18107609-18107742, 18108148-18109014)] [lcl|scaffold_8: delta, dna len= 18638009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3688 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:1661-1697, 2080-2168, 2294-2361, 2514-2574, 2685-2741, 2875-2970, 3173-3247, 3338-3434, 3619-3688, 4290-4350, 4449-4529, 4698-4784)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_022892-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4290 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:1661-1697, 2080-2168, 2294-2361, 2514-2574, 2685-2741, 2875-2970, 3173-3247, 3338-3434, 3619-3688, 4290-4350, 4449-4529, 4698-4784)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_022892-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 354985 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c356329-356266, c356007-355855, c355733-355570, c355313-355212, c355080-354985, c354774-354679, c354469-354331, c354130-353910, c353573-353453, c353357-353098, c352659-352294, c352038-351911, c351768-351561, c351326-351098, c350989-350856, c350723-350628)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_022932-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 352294 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c356329-356266, c356007-355855, c355733-355570, c355313-355212, c355080-354985, c354774-354679, c354469-354331, c354130-353910, c353573-353453, c353357-353098, c352659-352294, c352038-351911, c351768-351561, c351326-351098, c350989-350856, c350723-350628)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_022932-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 989420 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c990159-989994, c989802-989641, c989566-989420, c989321-989194, c989089-988890, c988778-988466)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_022996-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c1790687-1790631, c1789038-1789027, c1788568-1788460, c1787034-1786924, c1786321-1785237)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023061-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:1849407-1849556, 1849990-1850112, 1850270-1850334, 1851496-1851579, 1852162-1852274, 1852719-1852779, 1852973-1853048, 1853199-1853328, 1853617-1853682, 1854302-1854403, 1857864-1857875, 1858717-1859946, 1864132-1864298, 1864474-1864606, 1864808-1864891, 1866558-1866713, 1867076-1867220, 1867344-1867900, 1868108-1868194, 1868335-1868466, 1869756-1869851, 1870385-1870462, 1870879-1870956, 1871104-1871272, 1871416-1871472, 1871585-1871614, 1871721-1871865)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023066-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2872812 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c2885332-2885255, c2884876-2884825, c2883738-2883587, c2883312-2883126, c2882564-2882446, c2882030-2881889, c2881497-2881381, c2881248-2881122, c2881020-2880947, c2880755-2880668, c2880375-2880176, c2879981-2879849, c2879382-2879292, c2878862-2878705, c2878405-2878261, c2878012-2877890, c2877484-2877386, c2876575-2876390, c2876186-2876031, c2875894-2875819, c2875296-2875150, c2874561-2874464, c2874353-2874186, c2873058-2873017, c2872908-2872812, c2872280-2871946)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023171-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3140536 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:3137915-3137984, 3139469-3139527, 3139707-3139760, 3140052-3140157, 3140425-3140536, 3140678-3140771, 3140952-3141018, 3141304-3141368)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023216-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3272615 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c3272695-3272615, c3272519-3272438, c3272326-3272191, c3271979-3271796)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023235-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3337756 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:3334832-3334891, 3335569-3335698, 3335929-3336257, 3336393-3336468, 3336565-3336746, 3336876-3337019, 3337221-3337373, 3337632-3337756, 3337854-3337956, 3338067-3338240)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023245-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c3941889-3941874, c3941470-3941383, c3941217-3941112, c3940094-3940038, c3939706-3939636, c3938982-3938694, c3938006-3937995, c3937717-3937654, c3937303-3937220, c3936939-3936166, c3936057-3935936, c3935746-3935596, c3935162-3935103, c3934782-3934671, c3934562-3934407, c3934111-3933979, c3933708-3933506, c3933213-3933123)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023345-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4247729 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c4249042-4248950, c4248313-4248220, c4247791-4247729, c4247209-4247174, c4247072-4247024, c4246909-4246863, c4246779-4246708, c4246598-4246541, c4246442-4246280, c4246160-4246062, c4245947-4245825, c4245700-4245598, c4245488-4245252, c4245121-4244961, c4244873-4244725, c4244623-4244547, c4244425-4244306, c4243955-4243881, c4243304-4243242, c4242848-4242691, c4242345-4242337)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023391-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4308875 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c4310531-4310476, c4310066-4309850, c4309656-4309566, c4309406-4309337, c4309250-4309208, c4308967-4308875, c4308760-4308648, c4308454-4308374, c4308254-4308168, c4307992-4307855, c4307593-4307490, c4307375-4307269, c4307116-4307051, c4306850-4306731, c4306546-4306493, c4306099-4305953, c4305860-4305750)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023403-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4378783 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:4371968-4372031, 4373027-4373202, 4373319-4373402, 4373579-4373734, 4373915-4373979, 4374109-4374229, 4374463-4374573, 4374895-4375022, 4375230-4375371, 4375503-4375544, 4375635-4375748, 4376018-4376167, 4376352-4376462, 4376881-4376966, 4377202-4377391, 4377666-4377713, 4378287-4378355, 4378679-4378783, 4378886-4378966)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023413-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5459897 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:5458231-5458344, 5459083-5459216, 5459383-5459500, 5459627-5459697, 5459822-5459897, 5460076-5460138, 5460421-5460490, 5461385-5461467)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023552-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5459897 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:5454701-5454814, 5456290-5456415, 5459083-5459216, 5459383-5459500, 5459627-5459697, 5459822-5459897, 5460076-5460138, 5460421-5460490, 5461385-5461467)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023552-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5550024 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:5546762-5546819, 5547470-5547571, 5547676-5547799, 5547935-5548056, 5548175-5548320, 5548507-5548648, 5548804-5548916, 5549207-5549359, 5549562-5549666, 5549947-5550024, 5550140-5550309, 5550419-5550521, 5550713-5550811, 5551130-5551217, 5551537-5551706, 5551863-5552075, 5552264-5552386)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023570-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:5565231-5565284, 5566086-5566269, 5566471-5566638, 5566998-5567008, 5567299-5567482, 5567791-5567958, 5568230-5568508, 5569476-5569593, 5570862-5571013, 5571203-5571362, 5571480-5571555, 5571944-5572141, 5572307-5572582)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023573-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5803904 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:5794695-5794752, 5795257-5795307, 5796076-5796139, 5796902-5796993, 5797090-5797147, 5797409-5797566, 5797979-5798801, 5801473-5802918, 5803441-5803605, 5803870-5803904, 5804561-5804625, 5804766-5804902, 5805415-5805510, 5806488-5806806, 5807208-5807273, 5807969-5808707, 5809801-5810347, 5811250-5811382, 5812507-5812557, 5813476-5813553, 5814217-5814364, 5814486-5814581, 5814808-5814888, 5815165-5815342, 5815592-5815764, 5815939-5816094, 5817316-5817452, 5817999-5818146, 5818305-5818450, 5818789-5818964, 5819279-5819426, 5819534-5819816, 5820043-5820194, 5820676-5820781, 5820987-5821194, 5821310-5821443, 5821689-5821844, 5822006-5822149, 5822257-5822378, 5822630-5822785, 5823443-5823529)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023602-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c6036593-6036558, c6035544-6035535, c6035486-6035436, c6035238-6035164, c6034260-6034247)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023624-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c6434921-6434843, c6433932-6433918, c6431275-6431166)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023653-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6631048 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:6630592-6630706, 6630913-6631048, 6631242-6631404, 6631691-6631815, 6631900-6632008, 6632109-6632216, 6632475-6632628, 6632756-6632827, 6632941-6633040, 6633152-6633278, 6633554-6633658, 6634130-6634232, 6634361-6634593, 6634746-6634853, 6635054-6635277, 6635450-6635584, 6635965-6636040)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023683-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6852880 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:6838241-6838585, 6840739-6840869, 6842374-6842540, 6843196-6843384, 6843924-6844041, 6844456-6844554, 6845829-6845965, 6846133-6846255, 6846491-6846680, 6846795-6846907, 6847356-6847577, 6847984-6848172, 6848379-6848624, 6848749-6848902, 6849207-6849349, 6849449-6849627, 6849797-6849953, 6850147-6850352, 6850558-6850637, 6850841-6850978, 6851226-6851370, 6851590-6851739, 6852277-6852391, 6852681-6852880, 6853085-6853243, 6853477-6853576, 6853941-6854197)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023703-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6935873 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:6934179-6934385, 6934619-6934762, 6934889-6935045, 6935253-6935280, 6935762-6935873, 6936337-6936429, 6936598-6936661, 6936768-6936866, 6937010-6937113, 6937190-6937328, 6937457-6937575, 6937711-6937860, 6938035-6938205, 6938433-6938736, 6938848-6938912, 6939001-6939088, 6939218-6939335, 6939433-6939556, 6939719-6939855, 6940118-6940373, 6940498-6940740, 6940831-6941007, 6941164-6941309, 6941538-6941628, 6941881-6942270, 6942633-6942759, 6942941-6943059, 6943268-6943464, 6943611-6943794, 6943916-6944081, 6944180-6944304, 6944392-6944700, 6945046-6945255)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023707-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7278028 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:7276170-7276247, 7276381-7276543, 7276664-7276784, 7276938-7277012, 7277108-7277160, 7277257-7277402, 7277703-7277800, 7277929-7278028, 7278148-7278274, 7278456-7278595)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023745-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7319470 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c7320619-7320483, c7320294-7320131, c7319893-7319714, c7319617-7319470, c7319269-7319104, c7319003-7318890)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023755-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7434183 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:7434124-7434183, 7434719-7434869, 7436448-7436597, 7436884-7437087, 7437202-7437344, 7437663-7437810, 7438026-7442590, 7442714-7442812, 7442924-7443067, 7443186-7443281, 7443377-7443562)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023764-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7443067 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:7434124-7434183, 7434719-7434869, 7436448-7436597, 7436884-7437087, 7437202-7437344, 7437663-7437810, 7438026-7442590, 7442714-7442812, 7442924-7443067, 7443186-7443281, 7443377-7443562)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023764-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7456926 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:7454045-7454291, 7454997-7455428, 7455699-7456048, 7456461-7456622, 7456795-7456926, 7457086-7457196, 7457359-7457480, 7457584-7457704, 7457856-7458155)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023766-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7915211 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c7915327-7915211, c7915109-7915022, c7914897-7914777, c7914628-7914136)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023820-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7942833 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c7944185-7944080, c7942900-7942833, c7942742-7942629, c7942058-7941864, c7941421-7941212, c7941006-7940835, c7940722-7940578, c7940320-7940285, c7940172-7939971, c7939868-7939727, c7939518-7939373)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023822-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:8071436-8071526, 8072640-8072769, 8072996-8073196, 8073340-8073499, 8073808-8073921, 8074351-8074371, 8074523-8074543, 8074644-8074688, 8074788-8074841, 8074997-8075041, 8075149-8075175, 8075345-8075371, 8075542-8075586, 8075678-8075731, 8076481-8076543, 8076695-8076757, 8076853-8076906, 8077001-8077036, 8077133-8077195, 8077290-8077352, 8079047-8079109, 8079252-8079314, 8079460-8079510, 8079592-8079627, 8079799-8079861, 8081441-8081506, 8083298-8083333, 8083421-8083457, 8083618-8083626, 8083755-8083888, 8084010-8084119, 8084343-8084529, 8085024-8085195, 8085305-8085334, 8085420-8086042)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023836-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c8147149-8147042, c8146934-8146744, c8146626-8146521, c8146379-8146250, c8146124-8146084, c8145980-8145974, c8145797-8145730, c8145632-8145521, c8145333-8145206, c8145041-8144668, c8144559-8144430)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023853-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8211362 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c8211375-8211362, c8211274-8211226, c8210669-8210579, c8210440-8210371, c8210266-8210196, c8209813-8209760, c8208815-8208787, c8208572-8208547, c8208465-8208369, c8207449-8207342, c8204166-8204076, c8203869-8203697, c8203099-8203019)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023862-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8211362 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c8211375-8211362, c8211274-8211226, c8210669-8210579, c8210440-8210371, c8210266-8210196, c8209813-8209760, c8208815-8208787, c8208572-8208547, c8208465-8208369, c8207449-8207342, c8204166-8204076, c8203869-8203697, c8203468-8203463)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023862-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8832672 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c8833916-8833753, c8833605-8833479, c8833365-8833234, c8833114-8833040, c8832743-8832672, c8832565-8832449, c8832177-8831992, c8831867-8831758, c8831596-8831461, c8831244-8831134, c8831004-8830900, c8829926-8829826, c8829677-8829515, c8829396-8829271, c8829063-8828890)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023931-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8953176 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c8953212-8953176, c8953033-8952879, c8952759-8952679, c8952518-8952431, c8952310-8952194, c8952102-8951936, c8951829-8951647, c8951032-8950976)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023945-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8955353 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:8954151-8954551, 8954641-8954772, 8954858-8954979, 8955085-8955353, 8955452-8955536, 8955652-8955947)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_023946-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9896568 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c9904338-9904258, c9903344-9903210, c9902497-9902387, c9901813-9901157, c9900974-9900080, c9899953-9899859, c9899771-9899676, c9899566-9899429, c9899343-9899222, c9899040-9898856, c9898609-9898498, c9898052-9897950, c9897711-9897543, c9897383-9897283, c9897128-9896994, c9896836-9896761, c9896628-9896568, c9896482-9896467)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024057-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9896482 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c9904338-9904258, c9903344-9903210, c9902497-9902387, c9901813-9901157, c9900974-9900080, c9899953-9899859, c9899771-9899676, c9899566-9899429, c9899343-9899222, c9899040-9898856, c9898609-9898498, c9898052-9897950, c9897711-9897543, c9897383-9897283, c9897128-9896994, c9896836-9896761, c9896628-9896568, c9896482-9896467)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024057-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c10670631-10670508, c10669676-10669670, c10666989-10666779)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024137-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c10856274-10856235, c10856031-10856018, c10855567-10855433)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024160-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11197224 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11196718-11196789, 11197104-11197224, 11197346-11197440, 11197678-11197798, 11198262-11198350, 11198573-11198662)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024189-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11343011 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11341665-11341845, 11342243-11342342, 11342523-11342670, 11342851-11343011, 11343322-11343442, 11343747-11343952, 11344129-11344205, 11344412-11344556, 11344814-11344991)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024207-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11344205 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11341665-11341845, 11342243-11342342, 11342523-11342670, 11342851-11343011, 11343322-11343442, 11343747-11343952, 11344129-11344205, 11344412-11344556, 11344814-11344991)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024207-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11344412 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11341665-11341845, 11342243-11342342, 11342523-11342670, 11342851-11343011, 11343322-11343442, 11343747-11343952, 11344129-11344205, 11344412-11344556, 11344814-11344991)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024207-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11370055 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11369459-11370055, 11370337-11370432, 11370528-11370761, 11371001-11371160, 11371266-11371337, 11371614-11371715, 11372051-11372115)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024214-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11540375 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11538434-11538508, 11539359-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541614)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024237-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11540561 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11538434-11538508, 11539359-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541614)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024237-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11540375 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11539401-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541614)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024237-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11540561 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:11539401-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541614)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024237-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12082852 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c12083735-12083535, c12083327-12083267, c12082991-12082852, c12082620-12082516)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024310-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12095515 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:12086118-12086224, 12086373-12086595, 12086766-12086997, 12087229-12087756, 12088743-12088878, 12089115-12089201, 12089309-12089486, 12091903-12092287, 12092486-12092650, 12094495-12094638, 12095299-12095515, 12095923-12096001, 12096330-12096440)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024313-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12095923 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:12086118-12086224, 12086373-12086595, 12086766-12086997, 12087229-12087756, 12088743-12088878, 12089115-12089201, 12089309-12089486, 12091903-12092287, 12092486-12092650, 12094495-12094638, 12095299-12095515, 12095923-12096001, 12096330-12096440)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024313-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12726799 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:12720393-12720397, 12721112-12721246, 12721553-12721708, 12722951-12723079, 12723416-12723491, 12723917-12724046, 12725405-12725575, 12725900-12726018, 12726653-12726799, 12727003-12727103, 12727190-12727256, 12727408-12727500, 12729047-12729115, 12729347-12729429, 12729795-12729903, 12730029-12730109, 12734581-12734622)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024387-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13692241 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c13696402-13696330, c13694359-13694204, c13692309-13692241, c13691052-13690823)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024450-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:13747675-13747775, 13747994-13748195, 13750288-13750388, 13750740-13751028, 13753024-13753155, 13753466-13753579, 13753743-13753820, 13754107-13754223, 13754428-13754595, 13756841-13756983, 13758674-13758837, 13759315-13759528, 13760601-13760700, 13761629-13761724, 13762665-13762712, 13762981-13763070, 13765063-13765200, 13765910-13766290, 13766594-13766602, 13766900-13767463, 13767597-13767641)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024456-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:14172224-14172234, 14172779-14172784, 14173553-14173662, 14173769-14173875, 14174170-14174305, 14174489-14174660, 14174864-14174925, 14175212-14175225)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024502-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14451260 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:14448316-14448473, 14449408-14449491, 14449880-14449988, 14451129-14451260, 14451527-14451703, 14452146-14452660, 14452817-14452925, 14453086-14453270, 14453824-14454060, 14454280-14454349, 14456001-14456206, 14457251-14457425, 14458010-14458068, 14458632-14458762, 14459118-14459249, 14459772-14459990, 14461209-14461351)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024539-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c15332481-15332414, c15331835-15331823, c15331135-15331063, c15330327-15330209, c15329736-15329670, c15329246-15329074)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024628-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15669555 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:15669416-15669555, 15669929-15670001, 15670829-15671005, 15671602-15671664)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024680-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15669929 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:15669416-15669555, 15669929-15670001, 15670829-15671005, 15671602-15671664)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024680-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:15690074-15690077, 15692323-15692453, 15693493-15693621, 15694012-15694117, 15694700-15694783, 15696213-15696328, 15696538-15696630, 15696926-15697088, 15697689-15697695, 15697928-15698081, 15698557-15698703, 15698723-15698868, 15699199-15699202)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024682-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15840887 of lcl|scaffold_13 FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c15840952-15840887, c15840744-15840717, c15840584-15840493, c15840410-15840293, c15840057-15839878, c15839659-15839361)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024704-T1]
WARNING: valid [SEQ_FEAT.CDSmRNArange] mRNA overlaps or contains CDS but does not completely contain intervals FEATURE: CDS: hypothetical protein [(lcl|scaffold_13:c16278648-16278591, c16278233-16278095, c16277742-16277610, c16277439-16277274, c16277185-16277084, c16276480-16276358, c16276232-16276111, c16276019-16275859, c16275623-16275517, c16275425-16275234, c16274809-16274589, c16274015-16273914, c16273092-16272970, c16272230-16272094, c16271940-16271720, c16271562-16270911, c16270279-16269832)] [lcl|scaffold_13: delta, dna len= 16527564] -> [gnl|ncbi|FUN_024760-T1]
ERROR: valid [SEQ_FEAT.CDSmRNAXrefLocationProblem] CDS not contained within cross-referenced mRNA DESCRIPTOR: Pub: Palmer,J.M. (5-7-2024)  BIOSEQ: lcl|scaffold_13
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 16278679 FEATURE: Gene: FUN_024760 [lcl|scaffold_13:c16278683-16269832] [lcl|scaffold_13: delta, dna len= 16527564]
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 16278679 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c16278683-16278591, c16278233-16278095, c16277742-16277610, c16277439-16277274, c16277185-16277084, c16276480-16276358, c16276232-16276111, c16276019-16275859, c16275623-16275517, c16275425-16275234, c16274809-16274589, c16274015-16273914, c16273092-16272970, c16272230-16272094, c16271940-16271720, c16271562-16270911, c16270274-16269832)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3688 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:1566-1697, 2080-2168, 2294-2361, 2514-2574, 2685-2741, 2875-2970, 3173-3247, 3338-3434, 3619-3688, 4290-4350, 4449-4529, 4698-5135, 5412-6237)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4290 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:1566-1697, 2080-2168, 2294-2361, 2514-2574, 2685-2741, 2875-2970, 3173-3247, 3338-3434, 3619-3688, 4290-4350, 4449-4529, 4698-5135, 5412-6237)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 354985 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c357621-357441, c356861-356836, c356343-356266, c356007-355855, c355733-355570, c355313-355212, c355080-354985, c354774-354679, c354469-354331, c354130-353910, c353573-353453, c353357-353098, c352659-352294, c352038-351911, c351768-351561, c351326-351098, c350989-350856, c350723-350365)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 352294 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c357621-357441, c356861-356836, c356343-356266, c356007-355855, c355733-355570, c355313-355212, c355080-354985, c354774-354679, c354469-354331, c354130-353910, c353573-353453, c353357-353098, c352659-352294, c352038-351911, c351768-351561, c351326-351098, c350989-350856, c350723-350365)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 989420 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c990874-990788, c990178-989994, c989802-989641, c989566-989420, c989321-989194, c989089-988890, c988778-987062)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2872812 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c2885332-2885255, c2884876-2884825, c2883738-2883587, c2883312-2883126, c2882564-2882446, c2882030-2881889, c2881497-2881381, c2881248-2881122, c2881020-2880947, c2880755-2880668, c2880375-2880176, c2879981-2879849, c2879382-2879292, c2878862-2878705, c2878405-2878261, c2878012-2877890, c2877484-2877386, c2876575-2876390, c2876186-2876031, c2875894-2875819, c2875296-2875150, c2874561-2874464, c2874353-2874186, c2873058-2873017, c2872908-2872812, c2872280-2870765)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3140536 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:3137915-3137984, 3139469-3139527, 3139707-3139760, 3140052-3140157, 3140425-3140536, 3140678-3140771, 3140952-3141018, 3141304-3141368)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3272615 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c3272695-3272615, c3272519-3272438, c3272326-3272191, c3271979-3271796)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3337756 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:3331861-3332096, 3332876-3334226, 3334777-3334891, 3335569-3335698, 3335929-3336257, 3336393-3336468, 3336565-3336746, 3336876-3337019, 3337221-3337373, 3337632-3337756, 3337854-3337956, 3338067-3338593)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4247729 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c4249085-4248950, c4248313-4248220, c4247791-4247729, c4247209-4247174, c4247072-4247024, c4246909-4246863, c4246779-4246708, c4246598-4246541, c4246442-4246280, c4246160-4246062, c4245947-4245825, c4245700-4245598, c4245488-4245252, c4245121-4244961, c4244873-4244725, c4244623-4244547, c4244425-4244306, c4243955-4243881, c4243304-4243242, c4242848-4242691, c4242345-4240252)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4308875 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c4310632-4310476, c4310066-4309850, c4309656-4309566, c4309406-4309337, c4309250-4309208, c4308967-4308875, c4308760-4308648, c4308454-4308374, c4308254-4308168, c4307992-4307855, c4307593-4307490, c4307375-4307269, c4307116-4307051, c4306850-4306731, c4306546-4306493, c4306099-4305953, c4305860-4305063)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4378783 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:4369840-4370049, 4371923-4372031, 4373027-4373202, 4373319-4373402, 4373579-4373734, 4373915-4373979, 4374109-4374229, 4374463-4374573, 4374895-4375022, 4375230-4375371, 4375503-4375544, 4375635-4375748, 4376018-4376167, 4376352-4376462, 4376881-4376966, 4377202-4377391, 4377666-4377713, 4378287-4378355, 4378679-4378783, 4378886-4379521)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5459897 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:5458055-5458344, 5459083-5459216, 5459383-5459500, 5459627-5459697, 5459822-5459897, 5460076-5460138, 5460421-5460490, 5461385-5461756)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5459897 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:5454392-5454814, 5456290-5456415, 5459083-5459216, 5459383-5459500, 5459627-5459697, 5459822-5459897, 5460076-5460138, 5460421-5460490, 5461385-5461756)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5550024 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:5546740-5546819, 5547470-5547571, 5547676-5547799, 5547935-5548056, 5548175-5548320, 5548507-5548648, 5548804-5548916, 5549207-5549359, 5549562-5549666, 5549947-5550024, 5550140-5550309, 5550419-5550521, 5550713-5550811, 5551130-5551217, 5551537-5551706, 5551863-5552075, 5552264-5553137)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5803904 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:5794695-5794752, 5795257-5795307, 5796076-5796139, 5796902-5796993, 5797090-5797147, 5797409-5797566, 5797979-5798801, 5801473-5802918, 5803441-5803605, 5803870-5803904, 5804561-5804625, 5804766-5804902, 5805415-5805510, 5806488-5806806, 5807208-5807273, 5807969-5808707, 5809801-5810347, 5811250-5811382, 5812507-5812557, 5813476-5813553, 5814217-5814364, 5814486-5814581, 5814808-5814888, 5815165-5815342, 5815592-5815764, 5815939-5816094, 5817316-5817452, 5817999-5818146, 5818305-5818450, 5818789-5818964, 5819279-5819426, 5819534-5819816, 5820043-5820194, 5820676-5820781, 5820987-5821194, 5821310-5821443, 5821689-5821844, 5822006-5822149, 5822257-5822378, 5822630-5822785, 5823443-5824978)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6631048 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:6630439-6630488, 6630583-6630706, 6630913-6631048, 6631242-6631404, 6631691-6631815, 6631900-6632008, 6632109-6632216, 6632475-6632628, 6632756-6632827, 6632941-6633040, 6633152-6633278, 6633554-6633658, 6634130-6634232, 6634361-6634593, 6634746-6634853, 6635054-6635277, 6635450-6635584, 6635965-6636040)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6852880 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:6838241-6838585, 6840739-6840869, 6842374-6842540, 6843196-6843384, 6843924-6844041, 6844456-6844554, 6845829-6845965, 6846133-6846255, 6846491-6846680, 6846795-6846907, 6847356-6847577, 6847984-6848172, 6848379-6848624, 6848749-6848902, 6849207-6849349, 6849449-6849627, 6849797-6849953, 6850147-6850352, 6850558-6850637, 6850841-6850978, 6851226-6851370, 6851590-6851739, 6852277-6852391, 6852681-6852880, 6853085-6853243, 6853477-6853576, 6853941-6856947)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6935873 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:6933739-6933757, 6933957-6933995, 6934167-6934385, 6934619-6934762, 6934889-6935045, 6935253-6935280, 6935762-6935873, 6936337-6936429, 6936598-6936661, 6936768-6936866, 6937010-6937113, 6937190-6937328, 6937457-6937575, 6937711-6937860, 6938035-6938205, 6938433-6938736, 6938848-6938912, 6939001-6939088, 6939218-6939335, 6939433-6939556, 6939719-6939855, 6940118-6940373, 6940498-6940740, 6940831-6941007, 6941164-6941309, 6941538-6941628, 6941881-6942270, 6942633-6942759, 6942941-6943059, 6943268-6943464, 6943611-6943794, 6943916-6944081, 6944180-6944304, 6944392-6944700, 6945046-6945255)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7278028 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:7275979-7276247, 7276381-7276543, 7276664-7276784, 7276938-7277012, 7277108-7277160, 7277257-7277402, 7277703-7277800, 7277929-7278028, 7278148-7278274, 7278456-7278595)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7319470 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c7320637-7320483, c7320294-7320131, c7319893-7319714, c7319617-7319470, c7319269-7319104, c7319003-7318207)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7434183 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:7434068-7434183, 7434719-7434869, 7436448-7436597, 7436884-7437087, 7437202-7437344, 7437663-7437810, 7438026-7442590, 7442714-7442812, 7442924-7443067, 7443186-7443281, 7443377-7444669)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7443067 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:7434068-7434183, 7434719-7434869, 7436448-7436597, 7436884-7437087, 7437202-7437344, 7437663-7437810, 7438026-7442590, 7442714-7442812, 7442924-7443067, 7443186-7443281, 7443377-7444669)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7456926 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:7452950-7453086, 7453989-7454291, 7454997-7455428, 7455699-7456048, 7456461-7456622, 7456795-7456926, 7457086-7457196, 7457359-7457480, 7457584-7457704, 7457856-7459518)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7915211 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c7915586-7915483, c7915338-7915211, c7915109-7915022, c7914897-7914777, c7914628-7913631)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7942833 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c7945352-7945173, c7944192-7944080, c7942900-7942833, c7942742-7942629, c7942058-7941864, c7941421-7941212, c7941006-7940835, c7940722-7940578, c7940320-7940285, c7940172-7939971, c7939868-7939727, c7939518-7938192)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8105676 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:8105562-8105676, 8105889-8105960, 8106053-8106202, 8106320-8106406, 8106498-8106587, 8106689-8106720, 8106876-8106933, 8107020-8107222, 8107299-8107397, 8107501-8107610, 8107708-8107840, 8107960-8108056, 8108146-8108292, 8108392-8108563, 8108672-8108733, 8108820-8108938, 8109087-8109408)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8211362 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c8211455-8211362, c8211274-8211226, c8210669-8210579, c8210440-8210371, c8210266-8210196, c8209813-8209760, c8208815-8208787, c8208572-8208547, c8208465-8208369, c8207449-8207342, c8204166-8204076, c8203869-8203697, c8203099-8202408)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8211362 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c8211455-8211362, c8211274-8211226, c8210669-8210579, c8210440-8210371, c8210266-8210196, c8209813-8209760, c8208815-8208787, c8208572-8208547, c8208465-8208369, c8207449-8207342, c8204166-8204076, c8203869-8203697, c8203468-8203291)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8832672 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c8834643-8834416, c8833930-8833753, c8833605-8833479, c8833365-8833234, c8833114-8833040, c8832743-8832672, c8832565-8832449, c8832177-8831992, c8831867-8831758, c8831596-8831461, c8831244-8831134, c8831004-8830900, c8829926-8829826, c8829677-8829515, c8829396-8829271, c8829063-8828727)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8953176 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c8953212-8953176, c8953033-8952879, c8952759-8952679, c8952518-8952431, c8952310-8952194, c8952102-8951936, c8951829-8951647, c8951032-8950976)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8955353 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:8953967-8954551, 8954641-8954772, 8954858-8954979, 8955085-8955353, 8955452-8955536, 8955652-8956082)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9896568 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c9904455-9904258, c9903344-9903210, c9902497-9902387, c9901813-9901157, c9900974-9900080, c9899953-9899859, c9899771-9899676, c9899566-9899429, c9899343-9899222, c9899040-9898856, c9898609-9898498, c9898052-9897950, c9897711-9897543, c9897383-9897283, c9897128-9896994, c9896836-9896761, c9896628-9896568, c9896482-9896185)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9896482 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c9904455-9904258, c9903344-9903210, c9902497-9902387, c9901813-9901157, c9900974-9900080, c9899953-9899859, c9899771-9899676, c9899566-9899429, c9899343-9899222, c9899040-9898856, c9898609-9898498, c9898052-9897950, c9897711-9897543, c9897383-9897283, c9897128-9896994, c9896836-9896761, c9896628-9896568, c9896482-9896185)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11197224 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11196702-11196789, 11197104-11197224, 11197346-11197440, 11197678-11197798, 11198262-11198350, 11198573-11199546)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11343011 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11341650-11341845, 11342243-11342342, 11342523-11342670, 11342851-11343011, 11343322-11343442, 11343747-11343952, 11344129-11344205, 11344412-11344556, 11344814-11345903)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11344205 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11341650-11341845, 11342243-11342342, 11342523-11342670, 11342851-11343011, 11343322-11343442, 11343747-11343952, 11344129-11344205, 11344412-11344556, 11344814-11345903)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11344412 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11341650-11341845, 11342243-11342342, 11342523-11342670, 11342851-11343011, 11343322-11343442, 11343747-11343952, 11344129-11344205, 11344412-11344556, 11344814-11345903)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11370055 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11369388-11370055, 11370337-11370432, 11370528-11370761, 11371001-11371160, 11371266-11371337, 11371614-11371715, 11372051-11372390)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11540375 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11538337-11538508, 11539359-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541963)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11540561 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11538337-11538508, 11539359-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541963)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11540375 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11539299-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541963)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11540561 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:11539299-11539421, 11539504-11539609, 11539753-11539855, 11539967-11540112, 11540319-11540375, 11540561-11540715, 11541019-11541165, 11541405-11541476, 11541606-11541963)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12082852 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c12083735-12083535, c12083327-12083267, c12082991-12082852, c12082620-12081801)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 12095515 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:12085955-12086224, 12086373-12086595, 12086766-12086997, 12087229-12087756, 12088743-12088878, 12089115-12089201, 12089309-12089486, 12091903-12092287, 12092486-12092650, 12094495-12094638, 12095299-12095515, 12095923-12096001, 12096330-12096603)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12095923 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:12085955-12086224, 12086373-12086595, 12086766-12086997, 12087229-12087756, 12088743-12088878, 12089115-12089201, 12089309-12089486, 12091903-12092287, 12092486-12092650, 12094495-12094638, 12095299-12095515, 12095923-12096001, 12096330-12096603)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12726799 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:12720393-12720397, 12721112-12721246, 12721553-12721708, 12722951-12723079, 12723416-12723491, 12723917-12724046, 12725405-12725575, 12725900-12726018, 12726653-12726799, 12727003-12727103, 12727190-12727256, 12727408-12727500, 12729047-12729115, 12729347-12729429, 12729795-12729903, 12730029-12730109, 12734581-12734622)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13692241 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c13696402-13696330, c13694359-13694204, c13692309-13692241, c13691052-13690823)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14451260 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:14448316-14448473, 14449408-14449491, 14449880-14449988, 14451129-14451260, 14451527-14451703, 14452146-14452660, 14452817-14452925, 14453086-14453270, 14453824-14454060, 14454280-14454349, 14456001-14456206, 14457251-14457425, 14458010-14458068, 14458632-14458762, 14459118-14459249, 14459772-14459990, 14461209-14461351)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14639897 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c14639922-14639897, c14639764-14639601, c14639276-14639165, c14638836-14638759, c14638406-14638091)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15669555 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:15669239-15669555, 15669929-15670001, 15670829-15671005, 15671602-15671942)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15669929 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:15669239-15669555, 15669929-15670001, 15670829-15671005, 15671602-15671942)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15840887 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c15841249-15841158, c15840956-15840887, c15840744-15840717, c15840584-15840493, c15840410-15840293, c15840057-15839878, c15839659-15839315)] [lcl|scaffold_13: delta, dna len= 16527564]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16270274 of lcl|scaffold_13 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_13:c16278683-16278591, c16278233-16278095, c16277742-16277610, c16277439-16277274, c16277185-16277084, c16276480-16276358, c16276232-16276111, c16276019-16275859, c16275623-16275517, c16275425-16275234, c16274809-16274589, c16274015-16273914, c16273092-16272970, c16272230-16272094, c16271940-16271720, c16271562-16270911, c16270274-16269832)] [lcl|scaffold_13: delta, dna len= 16527564]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 330322 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:323889-324022, 324269-324459, 327366-329692, 329854-330017, 330184-330322, 330691-330773, 331993-332116, 332686-332777, 333880-333991)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031179-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 902526 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c903786-903673, c903505-903411, c903295-903252, c903167-903045, c902941-902757, c902574-902526, c902394-902337, c902216-902096, c901955-901836, c901748-901649, c901509-901409, c901234-901172)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031226-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1399358 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1401979-1401606, c1401414-1400635, c1400552-1400392, c1400277-1400086, c1399997-1399857, c1399461-1399358, c1399255-1399170, c1399054-1398946, c1398845-1398732, c1398639-1398523, c1397916-1397731, c1397526-1397323, c1397226-1396951, c1396830-1396647, c1395251-1395100, c1394994-1394890, c1394777-1394679, c1394507-1394337, c1393568-1393427, c1393296-1393176, c1391552-1391546)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031255-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1399358 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1401979-1401606, c1401414-1400635, c1400552-1400392, c1400277-1400086, c1399997-1399857, c1399461-1399358, c1399255-1399170, c1399054-1398946, c1398845-1398732, c1398639-1398523, c1397916-1397731, c1397526-1397323, c1397226-1396951, c1396830-1396647, c1395251-1395100, c1394994-1394890, c1394777-1394679, c1394507-1394337, c1393568-1393427, c1393296-1393176, c1392292-1392277)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031255-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1399358 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1401979-1401606, c1401414-1400635, c1400552-1400392, c1400277-1400086, c1399997-1399857, c1399461-1399358, c1399255-1399170, c1399054-1398946, c1398845-1398732, c1398639-1398523, c1397916-1397731, c1397526-1397323, c1397226-1396951, c1396830-1396647, c1395251-1395100, c1394994-1394890, c1394777-1394679, c1394507-1394337, c1393568-1393427, c1393296-1393176, c1391629-1391626)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031255-T3]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1513306-1513154, c1512919-1512881, c1512729-1512718, c1512609-1512484, c1512277-1512197, c1512068-1511963, c1511876-1511797, c1511700-1511638, c1511552-1511497, c1511370-1511248, c1510861-1510767, c1510674-1510609, c1510497-1510433, c1510322-1510233, c1510146-1510093, c1509997-1509888, c1509757-1509655, c1509529-1509455, c1509081-1508959)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031270-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1671716 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:1670440-1670454, 1670571-1670758, 1670856-1671140, 1671558-1671716, 1671910-1672057, 1672181-1672527, 1672617-1672810, 1673072-1673178, 1673265-1673472, 1673588-1674144)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031289-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1672057 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:1670440-1670454, 1670571-1670758, 1670856-1671140, 1671558-1671716, 1671910-1672057, 1672181-1672527, 1672617-1672810, 1673072-1673178, 1673265-1673472, 1673588-1674144)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031289-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1671910 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:1670440-1670454, 1670571-1670758, 1670856-1671140, 1671558-1671716, 1671910-1672057, 1672181-1672527, 1672617-1672810, 1673072-1673178, 1673265-1673472, 1673588-1674144)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031289-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1686011 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1686540-1686011, c1685989-1684939, c1684536-1684338, c1684168-1684060, c1683920-1683679, c1683556-1683432)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031291-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1894704 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1899785-1899767, c1899013-1898903, c1898759-1898611, c1898534-1898417, c1898283-1898232, c1897534-1897478, c1895346-1895183, c1894845-1894704, c1893283-1893159, c1893049-1892944, c1892788-1892622, c1892466-1892301, c1892161-1892055, c1891955-1891819, c1891696-1891537, c1891438-1891334, c1891242-1891054, c1890427-1890293, c1890192-1890025, c1889941-1889853, c1889764-1889569, c1889427-1889288, c1889202-1889043, c1888733-1888597, c1888170-1887984, c1887391-1887375)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031319-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1995175 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c1995900-1995828, c1995717-1995638, c1995493-1995359, c1995270-1995175, c1995057-1994893, c1994782-1994651, c1994536-1994493, c1994379-1994304)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031333-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2002002 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c2009378-2008911, c2008728-2008495, c2008335-2007493, c2007392-2007220, c2007098-2006939, c2006806-2006706, c2006595-2006433, c2006317-2006222, c2003925-2003842, c2003606-2003533, c2003159-2003030, c2002882-2002772, c2002634-2002580, c2002479-2002369, c2002247-2002137, c2002057-2002002, c2001912-2001843, c2001664-2001516, c2001430-2001281, c2001177-2001030, c2000937-2000869, c2000779-2000643)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031336-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2546766 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c2552363-2552346, c2552200-2552038, c2551821-2551669, c2551519-2551368, c2551168-2550901, c2549081-2548812, c2547438-2547305, c2547218-2547027, c2546878-2546766, c2546572-2546455, c2546365-2546267, c2546117-2545946, c2545829-2545696)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031393-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3218811 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:3218697-3218811, 3218913-3219032, 3219111-3219286, 3219423-3219518, 3219621-3219670, 3219799-3219877, 3220094-3220159, 3220259-3220349, 3220673-3220748, 3220824-3220922, 3221022-3221061)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031453-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3218811 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:3218697-3218811, 3218913-3219032, 3219111-3219286, 3219423-3219518, 3219621-3219670, 3219799-3219877, 3220094-3220159, 3220259-3220349, 3220673-3220752)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031453-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c3314290-3314237, c3314121-3314049, c3313684-3313673, c3313060-3312911, c3312486-3312441, c3312415-3312319)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031464-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4119322 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:4117446-4117505, 4118490-4118699, 4118862-4118965, 4119167-4119322, 4119801-4119970, 4120535-4120648, 4122218-4122716, 4123158-4123280, 4123967-4124082, 4124212-4124365, 4124743-4124965)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031555-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4119801 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:4117446-4117505, 4118490-4118699, 4118862-4118965, 4119167-4119322, 4119801-4119970, 4120535-4120648, 4122218-4122716, 4123158-4123280, 4123967-4124082, 4124212-4124365, 4124743-4124965)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031555-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c>4625037-4624963, c4624646-4624461, c4623612-4623486, c4623370-4623240, c4623093-4622854, c4622759-4622652, c4622492-4622287, c4622188-4622101, c4622003-4621872, c4621748-4621650)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031607-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4625037 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c>4625037-4624963, c4624646-4624461, c4623612-4623486, c4623370-4623240, c4623093-4622854, c4622759-4622652, c4622492-4622287, c4622188-4622101, c4622003-4621872, c4621748-4621650)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031607-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4685510 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:4684263-4684311, 4685045-4685147, 4685369-4685510, 4685762-4685878, 4686173-4686504, 4686803-4686914, 4687035-4687166, 4687272-4687388, 4687478-4687615, 4687765-4687842, 4687926-4687991, 4688183-4688452, 4688637-4688882, 4689155-4689291, 4689378-4689456, 4689571-4689726, 4690051-4690185, 4690278-4690304)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031613-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7030524 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:7028588-7028597, 7029476-7029628, 7030011-7030126, 7030364-7030524, 7030855-7031050, 7031901-7032107)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031891-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7795043 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c7795871-7795792, c7795708-7795587, c7795464-7795347, c7795165-7795043, c7794886-7794660, c7794253-7793997)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031959-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7795043 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c7795653-7795587, c7795464-7795347, c7795165-7795043, c7794886-7794660, c7794253-7793997)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_031959-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:9343098-9343145, 9343853-9343944, 9345016-9345118, 9346684-9346743, 9347347-9347632, 9347795-9348047, 9349563-9349575, 9350307-9350472, 9351622-9351868, 9353768-9353872, 9356165-9356226, 9356309-9356483, 9357613-9357709)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032091-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9633706 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c9636725-9636689, c9636615-9636457, c9636123-9635958, c9635118-9634957, c9633910-9633706, c9633387-9633214, c9633097-9632852, c9632495-9632367, c9632221-9631949, c9631643-9631512, c9631334-9631248, c9631135-9630980, c9630879-9630784, c9629651-9629526, c9629357-9629337)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032116-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c10189458-10189402, c10189319-10189252, c10189161-10189109, c10188894-10188787, c10188586-10188491, c10188141-10188040, c10187828-10187820, c10187664-10187611, c10187439-10187330)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032162-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10295321 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c10296223-10296161, c10295696-10295641, c10295431-10295321, c10294638-10294470, c10293344-10293263, c10293027-10292846, c10292471-10292322, c10292184-10292050, c10291935-10291882)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032172-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10367603 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:c10388385-10388325, c10387722-10387601, c10386136-10385999, c10385054-10384920, c10384176-10384035, c10383760-10383705, c10382651-10382613, c10382421-10382288, c10381634-10381532, c10381439-10381269, c10380919-10380752, c10380013-10379902, c10379776-10379675, c10377351-10377248, c10377142-10377101, c10374198-10374074, c10371894-10371783, c10370534-10370366, c10370090-10369990, c10368350-10368275, c10367923-10367889, c10367698-10367603, c10367215-10367052, c10366902-10366755, c10365990-10365850, c10365712-10365638, c10365496-10365392)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032177-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10416974 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:10416116-10416249, 10416872-10416974, 10417125-10417275, 10417396-10417479, 10417617-10417744, 10417946-10418085, 10418214-10418298)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032182-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10417125 of lcl|scaffold_18 FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:10416116-10416249, 10416872-10416974, 10417125-10417275, 10417396-10417479, 10417617-10417744, 10417946-10418085, 10418214-10418298)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032182-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:10933069-10933148, 10934878-10935067, 10935487-10935681, 10936025-10936037, 10938435-10938481, 10939042-10939232, 10941123-10941232, 10944173-10944282)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032205-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_18:13639322-13639498, 13639664-13639821, 13640239-13640248, 13641290-13641373, 13642537-13642758, 13642966-13643079, 13643345-13643470, 13643721-13643897, 13644972-13645094, 13645639-13645752, 13645913-13646045, 13646184-13646302, 13646650-13646750, 13646999-13647068, 13647181-13647258, 13647678-13647797, 13647998-13648597)] [lcl|scaffold_18: delta, dna len= 13817709] -> [gnl|ncbi|FUN_032413-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 330322 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:323887-324022, 324269-324459, 327366-329692, 329854-330017, 330184-330322, 330691-330773, 331993-332116, 332686-332777, 333880-335339)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 902526 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c903904-903673, c903505-903411, c903295-903252, c903167-903045, c902941-902757, c902574-902526, c902394-902337, c902216-902096, c901955-901836, c901748-901649, c901509-901409, c901234-900691)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1399358 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c1403117-1403048, c1401980-1401606, c1401414-1400635, c1400552-1400392, c1400277-1400086, c1399997-1399857, c1399461-1399358, c1399255-1399170, c1399054-1398946, c1398845-1398732, c1398639-1398523, c1397916-1397731, c1397526-1397323, c1397226-1396951, c1396830-1396647, c1395251-1395100, c1394994-1394890, c1394777-1394679, c1394507-1394337, c1393568-1393427, c1393296-1393176, c1391552-1390317)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1399358 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c1403117-1403048, c1401980-1401606, c1401414-1400635, c1400552-1400392, c1400277-1400086, c1399997-1399857, c1399461-1399358, c1399255-1399170, c1399054-1398946, c1398845-1398732, c1398639-1398523, c1397916-1397731, c1397526-1397323, c1397226-1396951, c1396830-1396647, c1395251-1395100, c1394994-1394890, c1394777-1394679, c1394507-1394337, c1393568-1393427, c1393296-1393176, c1392292-1392173)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1399358 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c1403117-1403048, c1401980-1401606, c1401414-1400635, c1400552-1400392, c1400277-1400086, c1399997-1399857, c1399461-1399358, c1399255-1399170, c1399054-1398946, c1398845-1398732, c1398639-1398523, c1397916-1397731, c1397526-1397323, c1397226-1396951, c1396830-1396647, c1395251-1395100, c1394994-1394890, c1394777-1394679, c1394507-1394337, c1393568-1393427, c1393296-1393176, c1391629-1390317)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1671716 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:1670440-1670454, 1670571-1670758, 1670856-1671140, 1671558-1671716, 1671910-1672057, 1672181-1672527, 1672617-1672810, 1673072-1673178, 1673265-1673472, 1673588-1675774)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1672057 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:1670440-1670454, 1670571-1670758, 1670856-1671140, 1671558-1671716, 1671910-1672057, 1672181-1672527, 1672617-1672810, 1673072-1673178, 1673265-1673472, 1673588-1675774)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1671910 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:1670440-1670454, 1670571-1670758, 1670856-1671140, 1671558-1671716, 1671910-1672057, 1672181-1672527, 1672617-1672810, 1673072-1673178, 1673265-1673472, 1673588-1675774)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1686011 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c1688238-1688198, c1686662-1686011, c1685989-1684939, c1684536-1684338, c1684168-1684060, c1683920-1683679, c1683556-1681806)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1894704 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c1900795-1899767, c1899013-1898903, c1898759-1898611, c1898534-1898417, c1898283-1898232, c1897534-1897478, c1895346-1895183, c1894845-1894704, c1893283-1893159, c1893049-1892944, c1892788-1892622, c1892466-1892301, c1892161-1892055, c1891955-1891819, c1891696-1891537, c1891438-1891334, c1891242-1891054, c1890427-1890293, c1890192-1890025, c1889941-1889853, c1889764-1889569, c1889427-1889288, c1889202-1889043, c1888733-1888597, c1888170-1887984, c1887391-1887353, c1886373-1885592)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1995175 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c1996536-1996306, c1996186-1995828, c1995717-1995638, c1995493-1995359, c1995270-1995175, c1995057-1994893, c1994782-1994651, c1994536-1994493, c1994379-1993774)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2002002 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c2009378-2008911, c2008728-2008495, c2008335-2007493, c2007392-2007220, c2007098-2006939, c2006806-2006706, c2006595-2006433, c2006317-2006222, c2003925-2003842, c2003606-2003533, c2003159-2003030, c2002882-2002772, c2002634-2002580, c2002479-2002369, c2002247-2002137, c2002057-2002002, c2001912-2001843, c2001664-2001516, c2001430-2001281, c2001177-2001030, c2000937-2000869, c2000779-2000643)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2546766 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c2552363-2552346, c2552200-2552038, c2551821-2551669, c2551519-2551368, c2551168-2550901, c2549081-2548812, c2547438-2547305, c2547218-2547027, c2546878-2546766, c2546572-2546455, c2546365-2546267, c2546117-2545946, c2545829-2544231)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3218811 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:3218286-3218307, 3218692-3218811, 3218913-3219032, 3219111-3219286, 3219423-3219518, 3219621-3219670, 3219799-3219877, 3220094-3220159, 3220259-3220349, 3220673-3220748, 3220824-3220922, 3221022-3221701)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3218811 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:3218286-3218307, 3218692-3218811, 3218913-3219032, 3219111-3219286, 3219423-3219518, 3219621-3219670, 3219799-3219877, 3220094-3220159, 3220259-3220349, 3220673-3220922, 3221022-3221701)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4119322 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:4117407-4117505, 4118490-4118699, 4118862-4118965, 4119167-4119322, 4119801-4119970, 4120535-4120648, 4122218-4122716, 4123158-4123280, 4123967-4124082, 4124212-4124365, 4124743-4124995)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4119801 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:4117407-4117505, 4118490-4118699, 4118862-4118965, 4119167-4119322, 4119801-4119970, 4120535-4120648, 4122218-4122716, 4123158-4123280, 4123967-4124082, 4124212-4124365, 4124743-4124995)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4625037 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c>4625037-4624963, c4624646-4624461, c4623612-4623486, c4623370-4623240, c4623093-4622854, c4622759-4622652, c4622492-4622287, c4622188-4622101, c4622003-4621872, c4621748-4620862)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4685510 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:4684179-4684311, 4685045-4685147, 4685369-4685510, 4685762-4685878, 4686173-4686504, 4686803-4686914, 4687035-4687166, 4687272-4687388, 4687478-4687615, 4687765-4687842, 4687926-4687991, 4688183-4688452, 4688637-4688882, 4689155-4689291, 4689378-4689456, 4689571-4689726, 4690051-4690185, 4690278-4690686)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6758115 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c6767086-6767074, c6766712-6766529, c6766240-6765825, c6763181-6763099, c6762921-6762629, c6762269-6762065, c6761402-6761281, c6761163-6760398, c6759753-6758115, c6757957-6757793)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7030524 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:7028588-7028597, 7029476-7029628, 7030011-7030126, 7030364-7030524, 7030855-7031050, 7031901-7032107)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7795043 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c7796143-7795792, c7795708-7795587, c7795464-7795347, c7795165-7795043, c7794886-7794660, c7794253-7793945)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7795043 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c7796143-7795879, c7795708-7795587, c7795464-7795347, c7795165-7795043, c7794886-7794660, c7794253-7793945)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9633706 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c9636725-9636689, c9636615-9636457, c9636123-9635958, c9635118-9634957, c9633910-9633706, c9633387-9633214, c9633097-9632852, c9632495-9632367, c9632221-9631949, c9631643-9631512, c9631334-9631248, c9631135-9630980, c9630879-9630784, c9629651-9629526, c9629357-9629337)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10295321 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c10297985-10297942, c10296351-10296161, c10295696-10295641, c10295431-10295321, c10294638-10294470, c10293344-10293263, c10293027-10292846, c10292471-10292322, c10292184-10292050, c10291935-10291240)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10367603 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c10388385-10388325, c10387722-10387601, c10386136-10385999, c10385054-10384920, c10384176-10384035, c10383760-10383705, c10382651-10382613, c10382421-10382288, c10381634-10381532, c10381439-10381269, c10380919-10380752, c10380013-10379902, c10379776-10379675, c10377351-10377248, c10377142-10377101, c10374198-10374074, c10371894-10371783, c10370534-10370366, c10370090-10369990, c10368350-10368275, c10367923-10367889, c10367698-10367603, c10367215-10367052, c10366902-10366755, c10365990-10365850, c10365712-10365638, c10365496-10364834)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10416974 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:10416074-10416249, 10416872-10416974, 10417125-10417275, 10417396-10417479, 10417617-10417744, 10417946-10418085, 10418214-10418298)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10417125 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:10416074-10416249, 10416872-10416974, 10417125-10417275, 10417396-10417479, 10417617-10417744, 10417946-10418085, 10418214-10418298)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12400527 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c12402108-12402007, c12401003-12400527, c12400500-12400436, c12400331-12400101)] [lcl|scaffold_18: delta, dna len= 13817709]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12400436 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:c12402108-12402007, c12401003-12400527, c12400500-12400436, c12400331-12400101)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13281926 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:13277403-13277885, 13278340-13278482, 13279416-13279571, 13279680-13279813, 13280133-13280227, 13280820-13280910, 13281325-13281490, 13281701-13281926, 13281959-13282342)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13281959 of lcl|scaffold_18 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_18:13277403-13277885, 13278340-13278482, 13279416-13279571, 13279680-13279813, 13280133-13280227, 13280820-13280910, 13281325-13281490, 13281701-13281926, 13281959-13282342)] [lcl|scaffold_18: delta, dna len= 13817709]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:498374-498497, 499097-499106, 499502-499630, 499799-499890, 503904-504100, 505072-505134)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_037793-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1493672 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:1490605-1490767, 1492622-1492740, 1492851-1492959, 1493530-1493672, 1494092-1494213, 1494557-1494638, 1494808-1494940, 1495463-1495566, 1495798-1495883, 1495981-1496141, 1496290-1496420, 1496701-1497114, 1497553-1497719, 1497810-1497967, 1498098-1498181, 1498346-1498441, 1499578-1499682, 1500350-1500436, 1501928-1502098, 1502391-1502513, 1502795-1502889)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_037867-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:2000412-2000445, 2001374-2001420, 2001651-2001731, 2001817-2001960, 2002092-2002154, 2002633-2002732, 2002913-2002957, 2003050-2003181, 2003386-2003480, 2003579-2003684, 2003805-2003854, 2003963-2004002, 2004122-2004129, 2004604-2004669, 2005173-2005253, 2005363-2005476)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_037931-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2038926 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:2035591-2035734, 2036062-2036122, 2037527-2037791, 2037882-2037956, 2038053-2038142, 2038351-2038444, 2038543-2038658, 2038871-2038926, 2039049-2039134, 2039395-2039523, 2039814-2039893, 2040031-2040166)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_037938-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2650999 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:2642492-2642500, 2642877-2642946, 2643628-2643921, 2644456-2644566, 2644743-2644895, 2645033-2645164, 2645320-2645457, 2645558-2645683, 2645775-2645920, 2646006-2646150, 2646318-2646476, 2646919-2647053, 2647287-2647574, 2647713-2647810, 2647923-2648181, 2648450-2648610, 2648691-2648901, 2649113-2649223, 2649369-2649559, 2649663-2649776, 2649938-2650008, 2650134-2650174, 2650288-2650384, 2650900-2650999, 2651092-2651166)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038007-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3234664 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c3236060-3235963, c3235412-3235316, c3235093-3234920, c3234786-3234664, c3234516-3234447, c3233764-3233592, c3233359-3233255, c3233099-3233070)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038092-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c3554447-3554373, c3554074-3553920, c3553652-3553645, c3552974-3552827, c3552176-3552032)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038130-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4166898 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4166626-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4170043)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038185-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4167440 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4166626-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4170043)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038185-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4166898 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4166524-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4170043)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038185-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4167440 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4166524-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4170043)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038185-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4424281 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4422832-4422842, 4423356-4423512, 4424156-4424281, 4425333-4425503, 4425888-4426013, 4427305-4427525, 4427839-4428067, 4428281-4428385, 4428498-4428617, 4430417-4430527, 4431651-4431692)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038215-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4493839 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4487862-4487901, 4489150-4489296, 4489761-4489808, 4491076-4491204, 4491785-4491913, 4492123-4492251, 4492587-4492814, 4493036-4493151, 4493376-4493499, 4493795-4493839, 4493942-4494148, 4494324-4494490)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038223-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4589914 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:4574258-4574339, 4575778-4575917, 4576497-4576607, 4576778-4576886, 4577098-4577222, 4577303-4577387, 4577500-4577666, 4577825-4577932, 4578107-4578230, 4579510-4579611, 4581596-4581751, 4582835-4582934, 4584159-4584270, 4585777-4585917, 4586366-4586472, 4587186-4587265, 4587907-4588050, 4589867-4589914, 4590851-4590973, 4591280-4591391, 4592499-4592585, 4593096-4593231, 4593601-4593668, 4595053-4595188)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038229-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5561653 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:5560132-5560318, 5561449-5561653, 5561761-5563785, 5563911-5564098, 5567222-5567337, 5567525-5567666, 5569955-5570031, 5570336-5570623, 5570729-5570830, 5572050-5572236, 5572310-5572407, 5573707-5573838)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038291-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5709951 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c5710071-5709951, c5709818-5709749, c5709649-5709547, c5709390-5709312, c5709202-5709150, c5709047-5708994, c5708901-5708799, c5708567-5708484, c5707972-5707869, c5707733-5707548)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038309-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5855051 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:5854631-5854783, 5854931-5855051, 5855272-5855378, 5855507-5855764, 5855980-5856082, 5856208-5856242, 5856320-5856370, 5856490-5856601, 5856756-5856816, 5856981-5857091, 5857276-5857439, 5857533-5857615, 5857710-5857823, 5857919-5858038)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038331-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5857823 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:5854631-5854783, 5854931-5855051, 5855272-5855378, 5855507-5855764, 5855980-5856082, 5856208-5856242, 5856320-5856370, 5856490-5856601, 5856756-5856816, 5856981-5857091, 5857276-5857439, 5857533-5857615, 5857710-5857823, 5857919-5858038)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038331-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6332926 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:6328769-6328916, 6329181-6329320, 6329542-6329640, 6329817-6329948, 6330048-6330131, 6330397-6330423, 6330506-6330553, 6330879-6330941, 6332800-6332926, 6333023-6333664, 6333827-6334011, 6334119-6334190)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038379-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6775444 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:6769032-6769143, 6769798-6769899, 6770470-6770598, 6771000-6771122, 6771459-6771568, 6772646-6772767, 6773060-6773283, 6773462-6773628, 6774014-6774230, 6774525-6774751, 6774870-6774992, 6775308-6775444, 6775744-6775928, 6776117-6778983, 6779032-6779859)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038421-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:7400039-7400158, 7400482-7400493, 7402236-7402343, 7402823-7402955, 7403736-7403819, 7404015-7404175, 7404270-7404362, 7404592-7404678, 7404910-7405002, 7406584-7406679, 7407030-7407162, 7407337-7407407, 7407620-7407748, 7408066-7408195, 7408328-7408455)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038481-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7431237 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:7427428-7427470, 7428843-7428979, 7429295-7429394, 7429674-7429759, 7430786-7430957, 7431058-7431237, 7431411-7431533, 7431863-7431975, 7432223-7432265, 7432532-7432643, 7432758-7432932, 7433035-7433205, 7433433-7434197)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038484-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7646218 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c7646478-7646218, c7646183-7646151)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038511-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7874874 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c7884868-7884621, c7884124-7883977, c7881757-7881668, c7881557-7881118, c7881007-7880665, c7880456-7880384, c7879983-7879889, c7879700-7879581, c7879500-7879019, c7878713-7878564, c7878422-7878335, c7878228-7878013, c7877390-7877343, c7877265-7877201, c7876731-7876630, c7876448-7876218, c7875979-7875828, c7874994-7874874, c7874423-7874332, c7874203-7873989, c7873457-7873389, c7872730-7872629)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038538-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c8305175-8305148, c8304774-8304617, c8304557-8304528, c8304471-8304308, c8303381-8303231, c8303083-8303015, c8302639-8302550, c8302337-8302200, c8301884-8301754, c8301637-8301552, c8301183-8301148, c8300723-8300698, c8299796-8299645, c8299406-8299310, c8298663-8298520, c8297948-8297871, c8297583-8297506, c8297080-8296994, c8296452-8296408, c8296301-8296281, c8295019-8294993, c8294675-8294607, c8294226-8294212, c8294063-8294043, c8293811-8293785, c8292948-8292860, c8292579-8292433, c8292313-8292190, c8292061-8291939)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038590-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8411338 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:8410883-8411029, 8411169-8411338, 8411608-8411701, 8411843-8411957, 8412283-8412416, 8412575-8412643, 8412852-8412929)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038612-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c8448606-8448513, c8447923-8447746, c8447511-8447368, c8447289-8447283, c8447109-8446955, c8446850-8446799)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038616-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8841877 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:8827611-8827641, 8828531-8828677, 8829297-8829445, 8829632-8829749, 8830980-8831121, 8831857-8832002, 8832418-8832560, 8832871-8833011, 8833274-8833390, 8833672-8833822, 8833964-8834075, 8836405-8836592, 8836771-8836988, 8837601-8837685, 8838043-8838355, 8839142-8841877, 8842099-8842187, 8842605-8842753)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038661-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c8967776-8967708, c8964678-8964583, c8960411-8960343, c8959693-8959607, c8958016-8957931, c8957849-8957717, c8956114-8956008, c8955763-8955662, c8954236-8954148, c8953536-8953523, c8953145-8953127, c8952586-8952459, c8952195-8952124, c8951799-8951738, c8951561-8951445, c8950806-8950719, c8950382-8950226, c8947678-8947524, c8947181-8947134)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038670-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:9124733-9124789, 9126389-9126396, 9126598-9126679, 9126868-9126976, 9127132-9127205, 9128032-9128121, 9128745-9128834, 9129053-9129136, 9130581-9130636, 9130932-9130978, 9131409-9131484, 9131633-9131666, 9131771-9131845, 9132111-9132198, 9132808-9132908)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038675-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9896855 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:9888124-9888147, 9888940-9889062, 9889278-9889440, 9889556-9889713, 9890941-9891000, 9891386-9891520, 9891815-9891947, 9892342-9892451, 9892677-9892802, 9893832-9893881, 9895520-9895720, 9895984-9896118, 9896692-9896855, 9897244-9897425)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038724-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9956173 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c9962301-9962287, c9960917-9960815, c9960376-9959895, c9959503-9959423, c9959181-9958981, c9957602-9957501, c9957394-9957278, c9956729-9956530, c9956317-9956173, c9955869-9955752, c9953652-9953555, c9953247-9953188, c9952951-9952806, c9952585-9952426, c9952332-9952207, c9951918-9951827, c9951615-9951466, c9951382-9951361)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038726-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9956173 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c9962301-9962287, c9960917-9960815, c9960376-9959895, c9959503-9959423, c9959181-9958981, c9957602-9957501, c9957394-9957278, c9956729-9956530, c9956317-9956173, c9955869-9955752, c9953652-9953555, c9953247-9953188, c9952951-9952806, c9952585-9952426, c9952332-9952207, c9951918-9951827, c9951615-9951420)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038726-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9968779 of lcl|scaffold_23 FEATURE: CDS: hypothetical protein [(lcl|scaffold_23:c9968821-9968779, c9967037-9966952, c9965925-9965797)] [lcl|scaffold_23: delta, dna len= 10998502] -> [gnl|ncbi|FUN_038728-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1493672 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:1490089-1490767, 1492622-1492740, 1492851-1492959, 1493530-1493672, 1494092-1494213, 1494557-1494638, 1494808-1494940, 1495463-1495566, 1495798-1495883, 1495981-1496141, 1496290-1496420, 1496701-1497114, 1497553-1497719, 1497810-1497967, 1498098-1498181, 1498346-1498441, 1499578-1499682, 1500350-1500436, 1501928-1502098, 1502391-1502513, 1502795-1502891)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2038926 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:2035591-2035734, 2036062-2036122, 2037527-2037791, 2037882-2037956, 2038053-2038142, 2038351-2038444, 2038543-2038658, 2038871-2038926, 2039049-2039134, 2039395-2039523, 2039814-2039893, 2040031-2040166)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2650999 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:2642492-2642500, 2642877-2642946, 2643628-2643921, 2644456-2644566, 2644743-2644895, 2645033-2645164, 2645320-2645457, 2645558-2645683, 2645775-2645920, 2646006-2646150, 2646318-2646476, 2646919-2647053, 2647287-2647574, 2647713-2647810, 2647923-2648181, 2648450-2648610, 2648691-2648901, 2649113-2649223, 2649369-2649559, 2649663-2649776, 2649938-2650008, 2650134-2650174, 2650288-2650384, 2650900-2650999, 2651092-2651499)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3234664 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c3236168-3235963, c3235412-3235316, c3235093-3234920, c3234786-3234664, c3234516-3234447, c3233764-3233592, c3233359-3233255, c3233099-3232828)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4166898 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4165850-4165892, 4166599-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4171459)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4167440 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4165850-4165892, 4166599-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4171459)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4166898 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4166183-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4171459)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4167440 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4166183-4166898, 4167015-4167113, 4167270-4167440, 4167666-4167737, 4167827-4167947, 4168116-4168248, 4168335-4168437, 4168656-4169021, 4169217-4169300, 4169957-4171459)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4424281 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4422832-4422842, 4423356-4423512, 4424156-4424281, 4425333-4425503, 4425888-4426013, 4427305-4427525, 4427839-4428067, 4428281-4428385, 4428498-4428617, 4430417-4430527, 4431651-4432909)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4493839 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4487862-4487901, 4489150-4489296, 4489761-4489808, 4491076-4491204, 4491785-4491913, 4492123-4492251, 4492587-4492814, 4493036-4493151, 4493376-4493499, 4493795-4493839, 4493942-4494148, 4494324-4494643)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4589914 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:4574258-4574339, 4575778-4575917, 4576497-4576607, 4576778-4576886, 4577098-4577222, 4577303-4577387, 4577500-4577666, 4577825-4577932, 4578107-4578230, 4579510-4579611, 4581596-4581751, 4582835-4582934, 4584159-4584270, 4585777-4585917, 4586366-4586472, 4587186-4587265, 4587907-4588050, 4589867-4589914, 4590851-4590973, 4591280-4591391, 4592499-4592585, 4593096-4593231, 4593601-4593668, 4595053-4598573)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5561653 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:5560115-5560318, 5561449-5561653, 5561761-5563785, 5563911-5564098, 5567222-5567337, 5567525-5567666, 5569955-5570031, 5570336-5570623, 5570729-5570830, 5572050-5572236, 5572310-5572407, 5573707-5573838)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5709951 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c5710467-5710403, c5710097-5709951, c5709818-5709749, c5709649-5709547, c5709390-5709312, c5709202-5709150, c5709047-5708994, c5708901-5708799, c5708567-5708484, c5707972-5707869, c5707733-5707471)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5855051 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:5854631-5854783, 5854931-5855051, 5855272-5855378, 5855507-5855764, 5855980-5856082, 5856208-5856242, 5856320-5856370, 5856490-5856601, 5856756-5856816, 5856981-5857091, 5857276-5857439, 5857533-5857615, 5857710-5857823, 5857919-5858139)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5857823 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:5854631-5854783, 5854931-5855051, 5855272-5855378, 5855507-5855764, 5855980-5856082, 5856208-5856242, 5856320-5856370, 5856490-5856601, 5856756-5856816, 5856981-5857091, 5857276-5857439, 5857533-5857615, 5857710-5857823, 5857919-5858139)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6332926 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:6328604-6328916, 6329181-6329320, 6329542-6329640, 6329817-6329948, 6330048-6330131, 6330397-6330423, 6330506-6330553, 6330879-6330941, 6332800-6332926, 6333023-6333664, 6333827-6334011, 6334119-6334204, 6334298-6334736)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6775444 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:6769032-6769143, 6769798-6769899, 6770470-6770598, 6771000-6771122, 6771459-6771568, 6772646-6772767, 6773060-6773283, 6773462-6773628, 6774014-6774230, 6774525-6774751, 6774870-6774992, 6775308-6775444, 6775744-6775928, 6776117-6778983, 6779032-6782651)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7431237 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:7427428-7427470, 7428843-7428979, 7429295-7429394, 7429674-7429759, 7430786-7430957, 7431058-7431237, 7431411-7431533, 7431863-7431975, 7432223-7432265, 7432532-7432643, 7432758-7432932, 7433035-7433205, 7433433-7436517)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7646218 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c7646762-7646218, c7646183-7646111)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7874874 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c7884868-7884621, c7884124-7883977, c7881757-7881668, c7881557-7881118, c7881007-7880665, c7880456-7880384, c7879983-7879889, c7879700-7879581, c7879500-7879019, c7878713-7878564, c7878422-7878335, c7878228-7878013, c7877390-7877343, c7877265-7877201, c7876731-7876630, c7876448-7876218, c7875979-7875828, c7874994-7874874, c7874423-7874332, c7874203-7873989, c7873457-7873389, c7872730-7872447)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8411338 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:8410088-8410179, 8410850-8411029, 8411169-8411338, 8411608-8411701, 8411843-8411957, 8412283-8412416, 8412575-8412643, 8412852-8413891)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8841877 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:8827611-8827641, 8828531-8828677, 8829297-8829445, 8829632-8829749, 8830980-8831121, 8831857-8832002, 8832418-8832560, 8832871-8833011, 8833274-8833390, 8833672-8833822, 8833964-8834075, 8836405-8836592, 8836771-8836988, 8837601-8837685, 8838043-8838355, 8839142-8841877, 8842099-8842187, 8842605-8843714, 8843756-8844348)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8843714 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:8827611-8827641, 8828531-8828677, 8829297-8829445, 8829632-8829749, 8830980-8831121, 8831857-8832002, 8832418-8832560, 8832871-8833011, 8833274-8833390, 8833672-8833822, 8833964-8834075, 8836405-8836592, 8836771-8836988, 8837601-8837685, 8838043-8838355, 8839142-8841877, 8842099-8842187, 8842605-8843714, 8843756-8844348)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8843756 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:8827611-8827641, 8828531-8828677, 8829297-8829445, 8829632-8829749, 8830980-8831121, 8831857-8832002, 8832418-8832560, 8832871-8833011, 8833274-8833390, 8833672-8833822, 8833964-8834075, 8836405-8836592, 8836771-8836988, 8837601-8837685, 8838043-8838355, 8839142-8841877, 8842099-8842187, 8842605-8843714, 8843756-8844348)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9337098 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c9343601-9343390, c9342327-9342218, c9341940-9341868, c9339366-9339284, c9339002-9338799, c9338439-9338305, c9337321-9337098, c9337073-9337039)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9337073 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c9343601-9343390, c9342327-9342218, c9341940-9341868, c9339366-9339284, c9339002-9338799, c9338439-9338305, c9337321-9337098, c9337073-9337039)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9425519 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:9420795-9421103, 9421624-9423372, 9423645-9423775, 9424802-9424988, 9425250-9425519, 9425632-9425809)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9425632 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:9420795-9421103, 9421624-9423372, 9423645-9423775, 9424802-9424988, 9425250-9425519, 9425632-9425809)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9425519 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:9420795-9421103, 9421624-9423372, 9423645-9423775, 9424900-9424988, 9425250-9425519, 9425632-9425809)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9425632 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:9420795-9421103, 9421624-9423372, 9423645-9423775, 9424900-9424988, 9425250-9425519, 9425632-9425809)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9896855 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:9888124-9888147, 9888940-9889062, 9889278-9889440, 9889556-9889713, 9890941-9891000, 9891386-9891520, 9891815-9891947, 9892342-9892451, 9892677-9892802, 9893832-9893881, 9895520-9895720, 9895984-9896118, 9896692-9896855, 9897244-9898178)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9956173 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c9962345-9962287, c9960917-9960815, c9960376-9959895, c9959503-9959423, c9959181-9958981, c9957602-9957501, c9957394-9957278, c9956729-9956530, c9956317-9956173, c9955869-9955752, c9953652-9953555, c9953247-9953188, c9952951-9952806, c9952585-9952426, c9952332-9952207, c9951918-9951827, c9951615-9951466, c9951382-9951090)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9956173 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c9962345-9962287, c9960917-9960815, c9960376-9959895, c9959503-9959423, c9959181-9958981, c9957602-9957501, c9957394-9957278, c9956729-9956530, c9956317-9956173, c9955869-9955752, c9953652-9953555, c9953247-9953188, c9952951-9952806, c9952585-9952426, c9952332-9952207, c9951918-9951827, c9951615-9951090)] [lcl|scaffold_23: delta, dna len= 10998502]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9968779 of lcl|scaffold_23 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_23:c9968869-9968779, c9967037-9966952, c9965925-9965513)] [lcl|scaffold_23: delta, dna len= 10998502]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c464975-464951, c463911-463658, c463576-463462, c463374-463310, c461698-461597, c461472-461373, c460922-460909, c460891-460640, c460536-460504, c460355-460304, c459730-459657, c459349-459272, c459180-459046, c458658-458524, c458401-458306, c458189-458117, c458029-457941, c457856-457740, c457651-457508, c457400-457299, c457193-457122, c457033-456893)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043217-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c489952-489906, c489598-489458, c489111-489100, c489015-488904, c488265-488200)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043221-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 583861 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c584305-584259, c584127-584061, c583978-583861, c583773-583710, c583183-583009, c582887-582846)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043231-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c>603990-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043235-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c>603990-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043235-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 603982 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c>603990-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043235-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 603990 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c>603990-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043235-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 601639 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c>603990-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043235-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1601834 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c1603281-1603129, c1602787-1602696, c1602184-1602049, c1601942-1601834, c1600988-1600882, c1600630-1599570, c1598907-1598751)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043349-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1646509 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c1649338-1648855, c1648301-1648107, c1648049-1647856, c1647398-1647210, c1647068-1646946, c1646848-1646782, c1646690-1646509, c1646393-1646279, c1646115-1645960, c1645841-1644938, c1644788-1644657, c1644372-1644123)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043356-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2163002 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:2162351-2162420, 2162594-2162734, 2162847-2163002, 2163249-2163401, 2163715-2163894, 2166602-2166766, 2166896-2166990, 2167080-2167266, 2167493-2167586, 2167740-2167995, 2168110-2168149, 2168254-2168390)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043442-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2199807 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:2197175-2197247, 2197379-2197510, 2197620-2197784, 2197940-2198086, 2198363-2198599, 2198739-2198917, 2199019-2199110, 2199184-2199317, 2199413-2199621, 2199714-2199807, 2199838-2200703)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043448-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2262672 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c2268181-2268114, c2267953-2267847, c2267092-2266818, c2266137-2266049, c2265642-2265522, c2265372-2265292, c2265146-2264997, c2264804-2264637, c2264476-2264295, c2264048-2263815, c2263540-2263323, c2263200-2263061, c2262915-2262672, c2262264-2262179)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043459-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2347440 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c2351126-2350904, c2349680-2349557, c2349409-2349292, c2348120-2347975, c2347731-2347440, c2347167-2347048, c2346807-2346650, c2346510-2346399, c2346255-2346069, c2345759-2345635, c2345344-2345210, c2345043-2344956, c2344794-2344667, c2344452-2344314, c2344072-2343921, c2343761-2343611, c2343185-2343049, c2342767-2342578, c2342239-2342115, c2341726-2341554, c2341384-2341267, c2340892-2340779, c2340568-2340461)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043478-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2732562 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c2733816-2733757, c2733123-2733048, c2732731-2732562, c2732290-2732117, c2731821-2731655, c2731347-2731047, c2730682-2730458, c2730317-2730210, c2730101-2729957, c2729845-2729695, c2729366-2729288)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043537-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:2737193-2737206, 2737614-2737716, 2737872-2737878, 2737984-2738308, 2739299-2739427, 2739774-2739903, 2740021-2740125, 2740595-2740690, 2741150-2741253, 2741422-2741539)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043538-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c2876354-2876328, c2875206-2875181, c2874976-2874948, c2874679-2874666, c2874266-2873955, c2873810-2873759, c2873444-2873325, c2873161-2873133, c2873025-2872989, c2872903-2872831, c2872711-2872687, c2872571-2872541, c2872335-2872230, c2871823-2871727, c2871040-2870882, c2870328-2870212)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043554-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:3091631-3091720, 3092267-3092336, 3092831-3092837, 3093002-3093317, 3094706-3094738)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043587-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3123784 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:3118813-3118866, 3119754-3119829, 3121886-3121929, 3122588-3122650, 3123014-3123202, 3123330-3123425, 3123724-3123784, 3123947-3124030, 3124275-3124381, 3125376-3125546, 3126533-3126672, 3127098-3127267, 3127345-3127484)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043594-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3370597 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c3371327-3371262, c3370946-3370808, c3370713-3370597, c3370498-3370323, c3369773-3369685, c3369541-3369350, c3369171-3369079, c3368949-3368497, c3368312-3368210, c3367181-3367020)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043639-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:3378340-3378384, 3380705->3381233)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043640-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3381233 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:3378340-3378384, 3380705->3381233)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043640-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3387675 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:<3386413-3386460, 3387167-3387211, 3387454-3387675, 3387700-3388005, 3388613-3388654, 3389025-3389096, 3389235-3389348, 3389560-3389664, 3389756-3389854, 3390455-3390493, 3390633-3390761, 3391147-3391206)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043642-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3635491 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:3634114-3634341, 3635056-3635203, 3635336-3635491, 3635681-3635815, 3635914-3636052, 3636245-3636378, 3636963-3637042, 3637362-3637497, 3637672-3637724)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043668-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c4629363-4628633, c4626914-4626794, c4626330-4626188, c4625430-4625342, c4624962-4624949, c4624137-4624000, c4623378-4623328)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043771-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c4708690-4708411, c4708180-4707890, c4707461-4707177, c4706650-4706537, c4706323-4706311, c4706196-4706043, c4705726-4705628)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043782-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4754956 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:4751579-4751690, 4753455-4753524, 4753646-4753701, 4753801-4753872, 4754092-4754111, 4754253-4754409, 4754861-4754956, 4755105-4755166, 4755272-4755293, 4755417-4755522, 4756345-4756432, 4756725-4756823)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043788-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4755105 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:4751579-4751690, 4753455-4753524, 4753646-4753701, 4753801-4753872, 4754092-4754111, 4754253-4754409, 4754861-4754956, 4755105-4755166, 4755272-4755293, 4755417-4755522, 4756345-4756432, 4756725-4756823)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043788-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5257668 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c5257715-5257668, c5257268-5257077)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043840-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5637718 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c5638716-5638637, c5638195-5638056, c5637860-5637718, c5637541-5637388, c5635855-5635734, c5635533-5635436, c5635224-5635155)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043871-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5637718 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c5638716-5638637, c5638195-5638056, c5637860-5637718, c5637541-5637388, c5635855-5635734, c5635533-5635436, c5635224-5635159, c5633734-5633722)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043871-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6054778 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:6052336-6052520, 6053140-6053407, 6053828-6054403, 6054695-6054778, 6054876-6055010, 6055193-6055385, 6056036-6056116, 6056872-6057029, 6057271-6057400, 6057734-6057859, 6058172-6058345, 6060325-6060462, 6062001-6062135, 6063256-6063375, 6063685-6063762, 6064515-6064855, 6065086-6065170, 6066786-6066857, 6066967-6067092, 6067185-6067302, 6067677-6067789, 6068136-6068295, 6068393-6068580, 6068708-6068921, 6069226-6069298, 6069506-6069703, 6070216-6070356)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043926-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6069298 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:6052336-6052520, 6053140-6053407, 6053828-6054403, 6054695-6054778, 6054876-6055010, 6055193-6055385, 6056036-6056116, 6056872-6057029, 6057271-6057400, 6057734-6057859, 6058172-6058345, 6060325-6060462, 6062001-6062135, 6063256-6063375, 6063685-6063762, 6064515-6064855, 6065086-6065170, 6066786-6066857, 6066967-6067092, 6067185-6067302, 6067677-6067789, 6068136-6068295, 6068393-6068580, 6068708-6068921, 6069226-6069298, 6069506-6069703, 6070216-6070356)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043926-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c6443267-6443155, c6442798-6442681, c6442165-6442069, c6442022-6441839, c6441410-6441283, c6441046-6440795, c6440268-6440185, c6438424-6438233, c6437889-6437759, c6437411-6437264, c6437153-6437027, c6436805-6436648, c6436404-6436126, c6435951-6435806, c6435722-6435572, c6435394-6435173, c6435053-6434940, c6434827-6434640, c6434318-6434222, c6433967-6433806, c6433007-6432894, c6432792-6432596, c6432388-6432307, c6432213-6432082, c6431962-6431819, c6431716-6431557, c6431191-6431067, c6430981-6430798, c6430705-6430608, c6430275-6429997, c6429675-6429482, c6429368-6429287, c6429198-6429062, c6428823-6428679, c6428573-6428429, c6427723-6427717, c6427224-6427083, c6426595-6426451, c6425429-6425302, c6425009-6424853, c6424752-6424631, c6424540-6424376, c6423927-6423820, c64237...] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043963-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6524234 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c6526173-6525951, c6525332-6525112, c6524833-6524750, c6524358-6524234, c6523923-6523774, c6523490-6523347, c6523139-6522995, c6522888-6522796, c6522610-6522465, c6522178-6522009, c6521733-6521600, c6521220-6521100, c6519854-6519610, c6519437-6519296, c6519170-6519044, c6518902-6518692, c6518597-6517407, c6517218-6517066, c6516863-6516687, c6516604-6516458, c6516185-6516035, c6515705-6515590)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_043975-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c6954133-6954114, c6951531-6951501, c6949518-6949373, c6949140-6949049, c6948402-6948395, c6948259-6948185, c6947567-6947484, c6946849-6946718, c6945598-6945521, c6943818-6943708, c6943436-6943314, c6942378-6942331)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044003-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c7882185-7882170, c7881416-7881380, c7881272-7881221, c7881063-7880913, c7880694-7880680, c7880364-7880166, c7879757-7879486, c7879223-7879058, c7876592-7876555, c7875780-7875748, c7875625-7875510, c7875346-7875217, c7875111-7875001, c7874878-7874752, c7874634-7874534, c7874302-7874035, c7873810-7873774)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044094-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8318359 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:8317840-8318058, 8318174-8318359, 8318741-8319457)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044143-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8429436 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:8426634-8426732, 8427232-8427367, 8427723-8427847, 8428238-8428283, 8428467-8428610, 8429247-8429436, 8429542-8429608, 8429713-8429794, 8430027-8430088, 8430302-8430432, 8430839-8430996, 8431241-8431492, 8431696-8431856, 8432098-8432162, 8432343-8432526)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044157-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:c8705402-8705326, c8703006-8702906, c8702419-8702201, c8701530-8701523, c8701237-8701006, c8700543-8700383, c8700277-8700166, c8699981-8699791, c8699397-8699245, c8699109-8699036, c8697812-8697581, c8697358-8697293, c8697281-8697123, c8696938-8696876, c8693970-8693611)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044180-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9453845 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:9448855-9448870, 9450662-9450829, 9451170-9451309, 9453744-9453845, 9454244-9454424, 9455234-9455522, 9455750-9456056)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044245-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9454244 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:9448855-9448870, 9450662-9450829, 9451170-9451309, 9453744-9453845, 9454244-9454424, 9455234-9455522, 9455750-9456056)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044245-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9793863 of lcl|scaffold_28 FEATURE: CDS: hypothetical protein [(lcl|scaffold_28:9792874-9792946, 9793189-9793307, 9793519-9793624, 9793721-9793863, 9794177-9794298, 9794906-9794987, 9795662-9795794, 9796035-9796138, 9796321-9796400, 9798522-9798661, 9798829-9798992, 9799232-9799306, 9800490-9800674, 9800821-9801023, 9801290-9801414)] [lcl|scaffold_28: delta, dna len= 10002315] -> [gnl|ncbi|FUN_044279-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 303658 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:297079-297259, 297706-297819, 298262-298459, 298639-298844, 299177-299327, 299470-299573, 299704-299763, 299922-300076, 300679-300845, 301040-301364, 301532-301617, 301824-301985, 302321-303658, 303697-303981)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 583861 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c584305-584259, c584127-584061, c583978-583861, c583773-583710, c583183-583009, c582887-582846)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c>603992-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 603982 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c>603992-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 603992 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c>603992-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 601639 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c>603992-603982, c603542-603421, c603270-603189, c602789-602657, c602249-602146, c601655-<601639)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1601834 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c1603281-1603129, c1602787-1602696, c1602184-1602049, c1601942-1601834, c1600988-1600882, c1600630-1599570, c1598907-1596244)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1646509 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c1650289-1650183, c1649345-1648855, c1648301-1648107, c1648049-1647856, c1647398-1647210, c1647068-1646946, c1646848-1646782, c1646690-1646509, c1646393-1646279, c1646115-1645960, c1645841-1644938, c1644788-1644657, c1644372-1644123)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2163002 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:2161675-2161811, 2162056-2162420, 2162594-2162734, 2162847-2163002, 2163249-2163401, 2163715-2163894, 2166602-2166766, 2166896-2166990, 2167080-2167266, 2167493-2167586, 2167740-2167995, 2168110-2168149, 2168254-2168565)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2199807 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:2197054-2197247, 2197379-2197510, 2197620-2197784, 2197940-2198086, 2198363-2198599, 2198739-2198917, 2199019-2199110, 2199184-2199317, 2199413-2199621, 2199714-2199807, 2199838-2200867)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2262672 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c2268295-2268114, c2267953-2267847, c2267092-2266818, c2266137-2266049, c2265642-2265522, c2265372-2265292, c2265146-2264997, c2264804-2264637, c2264476-2264295, c2264048-2263815, c2263540-2263323, c2263200-2263061, c2262915-2262672, c2262264-2261535)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2347440 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c2351126-2350904, c2349680-2349557, c2349409-2349292, c2348120-2347975, c2347731-2347440, c2347167-2347048, c2346807-2346650, c2346510-2346399, c2346255-2346069, c2345759-2345635, c2345344-2345210, c2345043-2344956, c2344794-2344667, c2344452-2344314, c2344072-2343921, c2343761-2343611, c2343185-2343049, c2342767-2342578, c2342239-2342115, c2341726-2341554, c2341384-2341267, c2340892-2340779, c2340568-2340440)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2732562 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c2733880-2733757, c2733123-2733048, c2732731-2732562, c2732290-2732117, c2731821-2731655, c2731347-2731047, c2730682-2730458, c2730317-2730210, c2730101-2729957, c2729845-2729695, c2729366-2728736)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3123784 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:3118813-3118866, 3119754-3119829, 3121886-3121929, 3122588-3122650, 3123014-3123202, 3123330-3123425, 3123724-3123784, 3123947-3124030, 3124275-3124381, 3125376-3125546, 3126533-3126672, 3127098-3127267, 3127345-3127484)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3370597 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c3371404-3371262, c3370946-3370808, c3370713-3370597, c3370498-3370323, c3369773-3369685, c3369541-3369350, c3369171-3369079, c3368949-3368497, c3368312-3368210, c3367181-3366840, c3366817-3366588)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3381233 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:3378285-3378384, 3380705->3381233)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3387675 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:<3386413-3386460, 3387167-3387211, 3387454-3387675, 3387700-3388005, 3388613-3388654, 3389025-3389096, 3389235-3389348, 3389560-3389664, 3389756-3389854, 3390455-3390493, 3390633-3390761, 3391147-3391214, 3391742-3392444)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3635491 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:3633958-3634341, 3635056-3635203, 3635336-3635491, 3635681-3635815, 3635914-3636052, 3636245-3636378, 3636963-3637042, 3637362-3637497, 3637672-3638404)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3731677 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c3746747-3746662, c3745700-3745452, c3745086-3744957, c3744855-3744502, c3744272-3744171, c3743795-3743546, c3742820-3742694, c3741890-3741717, c3741448-3741275, c3741142-3740969, c3740885-3740835, c3740465-3740335, c3739729-3739672, c3739437-3739343, c3739064-3738917, c3738573-3738410, c3738242-3738176, c3738076-3737966, c3737842-3737600, c3737346-3737233, c3737077-3736973, c3736568-3736482, c3736370-3736324, c3736170-3736004, c3735783-3735620, c3735488-3735231, c3734860-3734783, c3734236-3734018, c3733762-3733542, c3733355-3733250, c3733048-3732947, c3732837-3732711, c3732446-3732310, c3731758-3731677, c3730684-3729845)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3730684 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c3746747-3746662, c3745700-3745452, c3745086-3744957, c3744855-3744502, c3744272-3744171, c3743795-3743546, c3742820-3742694, c3741890-3741717, c3741448-3741275, c3741142-3740969, c3740885-3740835, c3740465-3740335, c3739729-3739672, c3739437-3739343, c3739064-3738917, c3738573-3738410, c3738242-3738176, c3738076-3737966, c3737842-3737600, c3737346-3737233, c3737077-3736973, c3736568-3736482, c3736370-3736324, c3736170-3736004, c3735783-3735620, c3735488-3735231, c3734860-3734783, c3734236-3734018, c3733762-3733542, c3733355-3733250, c3733048-3732947, c3732837-3732711, c3732446-3732310, c3731758-3731677, c3730684-3729845)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3968425 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:3956347-3956400, 3956901-3957070, 3957158-3957261, 3957519-3957671, 3957816-3957960, 3958333-3958487, 3959481-3959554, 3959665-3959843, 3960520-3960620, 3961635-3961782, 3961969-3962072, 3962754-3962844, 3963193-3963306, 3963825-3964329, 3964705-3964775, 3964879-3965045, 3965174-3965356, 3965571-3965681, 3965783-3965905, 3966291-3966478, 3966567-3966728, 3967173-3968425, 3968456-3969926)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4754956 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:4751505-4751690, 4753455-4753524, 4753646-4753701, 4753801-4753872, 4754092-4754111, 4754253-4754409, 4754861-4754956, 4755105-4755166, 4755272-4755293, 4755417-4755522, 4756345-4756432, 4756725-4757734)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4755105 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:4751505-4751690, 4753455-4753524, 4753646-4753701, 4753801-4753872, 4754092-4754111, 4754253-4754409, 4754861-4754956, 4755105-4755166, 4755272-4755293, 4755417-4755522, 4756345-4756432, 4756725-4757734)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5257668 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c5259609-5259438, c5257800-5257668, c5257268-5255356)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5608598 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c5608761-5608598, c5606781-5606392, c5605817-5605642, c5605114-5605061)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5637718 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c5638859-5638637, c5638195-5638056, c5637860-5637718, c5637541-5637388, c5635855-5635734, c5635533-5635436, c5635224-5634414)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5637718 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c5638859-5638637, c5638195-5638056, c5637860-5637718, c5637541-5637388, c5635855-5635734, c5635533-5635436, c5635224-5635159, c5633734-5633649)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6054778 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:6052336-6052520, 6053140-6053407, 6053828-6054403, 6054695-6054778, 6054876-6055010, 6055193-6055385, 6056036-6056116, 6056872-6057029, 6057271-6057400, 6057734-6057859, 6058172-6058345, 6060325-6060462, 6062001-6062135, 6063256-6063375, 6063685-6063762, 6064515-6064855, 6065086-6065170, 6066786-6066857, 6066967-6067092, 6067185-6067302, 6067677-6067789, 6068136-6068295, 6068393-6068580, 6068708-6068921, 6069226-6069298, 6069506-6069703, 6070216-6070495)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6069298 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:6052336-6052520, 6053140-6053407, 6053828-6054403, 6054695-6054778, 6054876-6055010, 6055193-6055385, 6056036-6056116, 6056872-6057029, 6057271-6057400, 6057734-6057859, 6058172-6058345, 6060325-6060462, 6062001-6062135, 6063256-6063375, 6063685-6063762, 6064515-6064855, 6065086-6065170, 6066786-6066857, 6066967-6067092, 6067185-6067302, 6067677-6067789, 6068136-6068295, 6068393-6068580, 6068708-6068921, 6069226-6069298, 6069506-6069703, 6070216-6070495)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6524234 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:c6526173-6525951, c6525332-6525112, c6524833-6524750, c6524358-6524234, c6523923-6523774, c6523490-6523347, c6523139-6522995, c6522888-6522796, c6522610-6522465, c6522178-6522009, c6521733-6521600, c6521220-6521100, c6519854-6519610, c6519437-6519296, c6519170-6519044, c6518902-6518692, c6518597-6517407, c6517218-6517066, c6516863-6516687, c6516604-6516458, c6516185-6516035, c6515705-6515233)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8318359 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:8317840-8318058, 8318174-8318359, 8318741-8319500)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8422121 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:8410057-8410101, 8410510-8410651, 8411031-8411227, 8411414-8411791, 8412101-8412229, 8412445-8412618, 8413200-8413268, 8414893-8415110, 8415860-8416008, 8419937-8420065, 8421085-8422121, 8422143-8422825)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8422143 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:8410057-8410101, 8410510-8410651, 8411031-8411227, 8411414-8411791, 8412101-8412229, 8412445-8412618, 8413200-8413268, 8414893-8415110, 8415860-8416008, 8419937-8420065, 8421085-8422121, 8422143-8422825)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8429436 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:8426477-8426732, 8427232-8427367, 8427723-8427847, 8428238-8428283, 8428467-8428610, 8429247-8429436, 8429542-8429608, 8429713-8429794, 8430027-8430088, 8430302-8430432, 8430839-8430996, 8431241-8431492, 8431696-8431856, 8432098-8432162, 8432343-8433173)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9453845 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:9448740-9448870, 9450662-9450829, 9451170-9451309, 9453744-9453845, 9454244-9454424, 9455234-9455522, 9455750-9457421)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9454244 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:9448740-9448870, 9450662-9450829, 9451170-9451309, 9453744-9453845, 9454244-9454424, 9455234-9455522, 9455750-9457421)] [lcl|scaffold_28: delta, dna len= 10002315]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9793863 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:9792874-9792946, 9793189-9793307, 9793519-9793624, 9793721-9793863, 9794177-9794298, 9794906-9794987, 9795662-9795794, 9796035-9796138, 9796321-9796400, 9798522-9798661, 9798829-9798992, 9799232-9799306, 9800490-9800674, 9800821-9801023, 9801290-9801414)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9808980 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:9806603-9808980, 9809005-9809277)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9809005 of lcl|scaffold_28 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_28:9806603-9808980, 9809005-9809277)] [lcl|scaffold_28: delta, dna len= 10002315]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_148:c>12535-12383, c12171-12075, c11834-11679, c11422-11256, c10869-10771)] [lcl|scaffold_148: raw, dna len= 12588] -> [gnl|ncbi|FUN_044709-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12535 of lcl|scaffold_148 FEATURE: CDS: hypothetical protein [(lcl|scaffold_148:c>12535-12383, c12171-12075, c11834-11679, c11422-11256, c10869-10771)] [lcl|scaffold_148: raw, dna len= 12588] -> [gnl|ncbi|FUN_044709-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_148:c>12537-12383, c12171-12075, c11834-11679, c11422-11256, c10869-10283)] [lcl|scaffold_148: raw, dna len= 12588]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12537 of lcl|scaffold_148 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_148:c>12537-12383, c12171-12075, c11834-11679, c11422-11256, c10869-10283)] [lcl|scaffold_148: raw, dna len= 12588]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_498:c>4891-<4737] [lcl|scaffold_498: delta, dna len= 6466] -> [gnl|ncbi|FUN_045080-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_698:4103-4231, 4455->4635)] [lcl|scaffold_698: delta, dna len= 4938] -> [gnl|ncbi|FUN_045233-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4635 of lcl|scaffold_698 FEATURE: CDS: hypothetical protein [(lcl|scaffold_698:4103-4231, 4455->4635)] [lcl|scaffold_698: delta, dna len= 4938] -> [gnl|ncbi|FUN_045233-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4635 of lcl|scaffold_698 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_698:3207-3384, 4090-4231, 4455->4635)] [lcl|scaffold_698: delta, dna len= 4938]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>4806-4749, c4433-4306, c3978-3780, c3669-3620, c3325-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>4806-4749, c4433-4306, c3978-3780, c3669-3620, c3325-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4806 of lcl|scaffold_723 FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>4806-4749, c4433-4306, c3978-3780, c3669-3620, c3325-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 61 of lcl|scaffold_723 FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>4806-4749, c4433-4306, c3978-3780, c3669-3620, c3325-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>3427-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T2]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>3427-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3427 of lcl|scaffold_723 FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>3427-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 61 of lcl|scaffold_723 FEATURE: CDS: hypothetical protein [(lcl|scaffold_723:c>3427-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808] -> [gnl|ncbi|FUN_045256-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 61 of lcl|scaffold_723 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_723:c>4808-4749, c4433-4306, c3978-3780, c3669-3620, c3325-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_723:c>3429-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3429 of lcl|scaffold_723 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_723:c>3429-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 61 of lcl|scaffold_723 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_723:c>3429-3248, c2723-2667, c2510-2439, c1830-1696, c1089-901, c793-669, c243-<61)] [lcl|scaffold_723: raw, dna len= 4808]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_783:<3008-3214] [lcl|scaffold_783: raw, dna len= 4482] -> [gnl|ncbi|FUN_045303-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [lcl|scaffold_783:<3006-3296] [lcl|scaffold_783: raw, dna len= 4482]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_863:c>3199-3086, c835-<633)] [lcl|scaffold_863: delta, dna len= 4176] -> [gnl|ncbi|FUN_045350-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_863:c>3199-3086, c835-<633)] [lcl|scaffold_863: delta, dna len= 4176] -> [gnl|ncbi|FUN_045350-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3199 of lcl|scaffold_863 FEATURE: CDS: hypothetical protein [(lcl|scaffold_863:c>3199-3086, c835-<633)] [lcl|scaffold_863: delta, dna len= 4176] -> [gnl|ncbi|FUN_045350-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 633 of lcl|scaffold_863 FEATURE: CDS: hypothetical protein [(lcl|scaffold_863:c>3199-3086, c835-<633)] [lcl|scaffold_863: delta, dna len= 4176] -> [gnl|ncbi|FUN_045350-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_863:c>3200-3086, c835-<633)] [lcl|scaffold_863: delta, dna len= 4176]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 633 of lcl|scaffold_863 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_863:c>3200-3086, c835-<633)] [lcl|scaffold_863: delta, dna len= 4176]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_898:c2111-2040, c1149-1047, c208-<152)] [lcl|scaffold_898: raw, dna len= 4014] -> [gnl|ncbi|FUN_045374-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 152 of lcl|scaffold_898 FEATURE: CDS: hypothetical protein [(lcl|scaffold_898:c2111-2040, c1149-1047, c208-<152)] [lcl|scaffold_898: raw, dna len= 4014] -> [gnl|ncbi|FUN_045374-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 152 of lcl|scaffold_898 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_898:c2180-2040, c1149-1047, c208-<152)] [lcl|scaffold_898: raw, dna len= 4014]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_963:c>3778-3670, c3556-3382)] [lcl|scaffold_963: raw, dna len= 3783]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3778 of lcl|scaffold_963 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_963:c>3778-3670, c3556-3382)] [lcl|scaffold_963: raw, dna len= 3783]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_998:c>3550-3275, c3148-3071, c696-592)] [lcl|scaffold_998: delta, dna len= 3631] -> [gnl|ncbi|FUN_045421-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3550 of lcl|scaffold_998 FEATURE: CDS: hypothetical protein [(lcl|scaffold_998:c>3550-3275, c3148-3071, c696-592)] [lcl|scaffold_998: delta, dna len= 3631] -> [gnl|ncbi|FUN_045421-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_998:c>3551-3275, c3148-3071, c696-314)] [lcl|scaffold_998: delta, dna len= 3631]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1033:c1343-1172, c1084-984, c452-<244)] [lcl|scaffold_1033: delta, dna len= 3510] -> [gnl|ncbi|FUN_045437-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 244 of lcl|scaffold_1033 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1033:c1343-1172, c1084-984, c452-<244)] [lcl|scaffold_1033: delta, dna len= 3510] -> [gnl|ncbi|FUN_045437-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 244 of lcl|scaffold_1033 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1033:c1343-1172, c1084-984, c452-<244)] [lcl|scaffold_1033: delta, dna len= 3510]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1108:<654-780, 1408-2083, 2432-2612, 2811-2984)] [lcl|scaffold_1108: raw, dna len= 3269] -> [gnl|ncbi|FUN_045480-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 654 of lcl|scaffold_1108 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1108:<654-780, 1408-2083, 2432-2612, 2811-2984)] [lcl|scaffold_1108: raw, dna len= 3269] -> [gnl|ncbi|FUN_045480-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1108:<652-780, 1408-2083, 2432-2612, 2811-2984)] [lcl|scaffold_1108: raw, dna len= 3269]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1133:<633-841, 1347-1490, 1736-1924, 2230-2347, 2598-2653, 2848->2957)] [lcl|scaffold_1133: raw, dna len= 3186]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 633 of lcl|scaffold_1133 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1133:<633-841, 1347-1490, 1736-1924, 2230-2347, 2598-2653, 2848->2957)] [lcl|scaffold_1133: raw, dna len= 3186]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c637-<560)] [lcl|scaffold_1178: delta, dna len= 3042] -> [gnl|ncbi|FUN_045513-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 560 of lcl|scaffold_1178 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c637-<560)] [lcl|scaffold_1178: delta, dna len= 3042] -> [gnl|ncbi|FUN_045513-T1]
WARNING: valid [SEQ_FEAT.CDSmRNArange] mRNA overlaps or contains CDS but does not completely contain intervals FEATURE: CDS: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c637-<560)] [lcl|scaffold_1178: delta, dna len= 3042] -> [gnl|ncbi|FUN_045513-T1]
ERROR: valid [SEQ_FEAT.CDSmRNAXrefLocationProblem] CDS not contained within cross-referenced mRNA DESCRIPTOR: Pub: Palmer,J.M. (5-7-2024)  BIOSEQ: lcl|scaffold_1178
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 1645 FEATURE: Gene: FUN_045513 [lcl|scaffold_1178:c>1647-<560] [lcl|scaffold_1178: delta, dna len= 3042]
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 1645 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c634-<560)] [lcl|scaffold_1178: delta, dna len= 3042]
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 1645 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c637-<560)] [lcl|scaffold_1178: delta, dna len= 3042] -> [gnl|ncbi|FUN_045513-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 560 of lcl|scaffold_1178 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c634-<560)] [lcl|scaffold_1178: delta, dna len= 3042]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 634 of lcl|scaffold_1178 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1178:c>1647-1550, c1443-1320, c950-837, c634-<560)] [lcl|scaffold_1178: delta, dna len= 3042]
WARNING: valid [SEQ_INST.LeadingX] Sequence starts with leading X BIOSEQ: gnl|ncbi|FUN_045513-T1: raw, aa len= 138
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1288:c>770-608, c359-<187)] [lcl|scaffold_1288: delta, dna len= 2752] -> [gnl|ncbi|FUN_045557-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 770 of lcl|scaffold_1288 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1288:c>770-608, c359-<187)] [lcl|scaffold_1288: delta, dna len= 2752] -> [gnl|ncbi|FUN_045557-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1288:c>771-608, c359-<187)] [lcl|scaffold_1288: delta, dna len= 2752]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 771 of lcl|scaffold_1288 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1288:c>771-608, c359-<187)] [lcl|scaffold_1288: delta, dna len= 2752]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1298:c>1897-<1024] [lcl|scaffold_1298: raw, dna len= 2732] -> [gnl|ncbi|FUN_045562-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1323:c>2012-1866, c278-<96)] [lcl|scaffold_1323: delta, dna len= 2660]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2012 of lcl|scaffold_1323 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1323:c>2012-1866, c278-<96)] [lcl|scaffold_1323: delta, dna len= 2660]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1528:c>2033-1901, c1308-1106)] [lcl|scaffold_1528: delta, dna len= 2269] -> [gnl|ncbi|FUN_045652-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2033 of lcl|scaffold_1528 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1528:c>2033-1901, c1308-1106)] [lcl|scaffold_1528: delta, dna len= 2269] -> [gnl|ncbi|FUN_045652-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1528:c>2034-1901, c1308-1106)] [lcl|scaffold_1528: delta, dna len= 2269]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2034 of lcl|scaffold_1528 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1528:c>2034-1901, c1308-1106)] [lcl|scaffold_1528: delta, dna len= 2269]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1538:c2164-2001, c1895-1745, c1411-1296, c982-833, c534-456, c306-<150)] [lcl|scaffold_1538: raw, dna len= 2251] -> [gnl|ncbi|FUN_045658-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 150 of lcl|scaffold_1538 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1538:c2164-2001, c1895-1745, c1411-1296, c982-833, c534-456, c306-<150)] [lcl|scaffold_1538: raw, dna len= 2251] -> [gnl|ncbi|FUN_045658-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 150 of lcl|scaffold_1538 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1538:c2174-2001, c1895-1745, c1411-1296, c982-833, c534-456, c306-<150)] [lcl|scaffold_1538: raw, dna len= 2251]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1578:<1487-1575, 1665->1870)] [lcl|scaffold_1578: raw, dna len= 2192] -> [gnl|ncbi|FUN_045675-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1870 of lcl|scaffold_1578 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1578:<1487-1575, 1665->1870)] [lcl|scaffold_1578: raw, dna len= 2192] -> [gnl|ncbi|FUN_045675-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1870 of lcl|scaffold_1578 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1578:<1487-1575, 1665->1870)] [lcl|scaffold_1578: raw, dna len= 2192]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1623:c>1915-1792, c1531-1453, c1263-1125, c561-499, c421-296)] [lcl|scaffold_1623: raw, dna len= 2131] -> [gnl|ncbi|FUN_045698-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1915 of lcl|scaffold_1623 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1623:c>1915-1792, c1531-1453, c1263-1125, c561-499, c421-296)] [lcl|scaffold_1623: raw, dna len= 2131] -> [gnl|ncbi|FUN_045698-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1915 of lcl|scaffold_1623 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1623:c>1915-1792, c1531-1453, c1263-1125, c561-499, c421-296)] [lcl|scaffold_1623: raw, dna len= 2131]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1723:c>1585-1425, c989-<887)] [lcl|scaffold_1723: raw, dna len= 2000] -> [gnl|ncbi|FUN_045740-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 887 of lcl|scaffold_1723 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1723:c>1585-1425, c989-<887)] [lcl|scaffold_1723: raw, dna len= 2000] -> [gnl|ncbi|FUN_045740-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1723:c>1587-1425, c989-<887)] [lcl|scaffold_1723: raw, dna len= 2000]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1587 of lcl|scaffold_1723 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1723:c>1587-1425, c989-<887)] [lcl|scaffold_1723: raw, dna len= 2000]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 887 of lcl|scaffold_1723 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1723:c>1587-1425, c989-<887)] [lcl|scaffold_1723: raw, dna len= 2000]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_1823:c1411-1340, c679-586, c499-486, c343-<126)] [lcl|scaffold_1823: raw, dna len= 1905] -> [gnl|ncbi|FUN_045777-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1913:c>1226-1080, c605-510, c167-<29)] [lcl|scaffold_1913: raw, dna len= 1779] -> [gnl|ncbi|FUN_045805-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 29 of lcl|scaffold_1913 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1913:c>1226-1080, c605-510, c167-<29)] [lcl|scaffold_1913: raw, dna len= 1779] -> [gnl|ncbi|FUN_045805-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1913:c>1228-1080, c605-510, c167-<29)] [lcl|scaffold_1913: raw, dna len= 1779]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1228 of lcl|scaffold_1913 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1913:c>1228-1080, c605-510, c167-<29)] [lcl|scaffold_1913: raw, dna len= 1779]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 29 of lcl|scaffold_1913 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1913:c>1228-1080, c605-510, c167-<29)] [lcl|scaffold_1913: raw, dna len= 1779]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1933:c>1602-1453, c877-637, c264-146)] [lcl|scaffold_1933: raw, dna len= 1760] -> [gnl|ncbi|FUN_045814-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1602 of lcl|scaffold_1933 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1933:c>1602-1453, c877-637, c264-146)] [lcl|scaffold_1933: raw, dna len= 1760] -> [gnl|ncbi|FUN_045814-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1933:c>1604-1453, c877-637, c264-78)] [lcl|scaffold_1933: raw, dna len= 1760]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1604 of lcl|scaffold_1933 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1933:c>1604-1453, c877-637, c264-78)] [lcl|scaffold_1933: raw, dna len= 1760]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1958:433-676, 1034-1142, 1428->1588)] [lcl|scaffold_1958: raw, dna len= 1723] -> [gnl|ncbi|FUN_045820-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1588 of lcl|scaffold_1958 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1958:433-676, 1034-1142, 1428->1588)] [lcl|scaffold_1958: raw, dna len= 1723] -> [gnl|ncbi|FUN_045820-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1588 of lcl|scaffold_1958 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1958:360-676, 1034-1142, 1428->1588)] [lcl|scaffold_1958: raw, dna len= 1723]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2063:c1594-1340, c828-644, c381-<236)] [lcl|scaffold_2063: raw, dna len= 1617] -> [gnl|ncbi|FUN_045859-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 236 of lcl|scaffold_2063 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2063:c1594-1340, c828-644, c381-<236)] [lcl|scaffold_2063: raw, dna len= 1617] -> [gnl|ncbi|FUN_045859-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 236 of lcl|scaffold_2063 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2063:c1594-1340, c828-644, c381-<236)] [lcl|scaffold_2063: raw, dna len= 1617]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2098:c>1469-1291, c874-829, c661-542, c209-36)] [lcl|scaffold_2098: raw, dna len= 1587] -> [gnl|ncbi|FUN_045874-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1469 of lcl|scaffold_2098 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2098:c>1469-1291, c874-829, c661-542, c209-36)] [lcl|scaffold_2098: raw, dna len= 1587] -> [gnl|ncbi|FUN_045874-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2098:c>1470-1291, c874-829, c661-542, c209-5)] [lcl|scaffold_2098: raw, dna len= 1587]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2168:<462-683, 935-1069, 1402->1509)] [lcl|scaffold_2168: raw, dna len= 1523] -> [gnl|ncbi|FUN_045896-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 462 of lcl|scaffold_2168 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2168:<462-683, 935-1069, 1402->1509)] [lcl|scaffold_2168: raw, dna len= 1523] -> [gnl|ncbi|FUN_045896-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2168:<460-683, 935-1069, 1402->1509)] [lcl|scaffold_2168: raw, dna len= 1523]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 460 of lcl|scaffold_2168 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2168:<460-683, 935-1069, 1402->1509)] [lcl|scaffold_2168: raw, dna len= 1523]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2203:c>1179-981, c782-657, c433-<336)] [lcl|scaffold_2203: raw, dna len= 1474] -> [gnl|ncbi|FUN_045905-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1179 of lcl|scaffold_2203 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2203:c>1179-981, c782-657, c433-<336)] [lcl|scaffold_2203: raw, dna len= 1474] -> [gnl|ncbi|FUN_045905-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2203:c>1180-981, c782-657, c433-<336)] [lcl|scaffold_2203: raw, dna len= 1474]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2238:c>1236-987, c216-<16)] [lcl|scaffold_2238: raw, dna len= 1448] -> [gnl|ncbi|FUN_045924-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2238:c>1236-987, c216-<16)] [lcl|scaffold_2238: raw, dna len= 1448] -> [gnl|ncbi|FUN_045924-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1236 of lcl|scaffold_2238 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2238:c>1236-987, c216-<16)] [lcl|scaffold_2238: raw, dna len= 1448] -> [gnl|ncbi|FUN_045924-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 16 of lcl|scaffold_2238 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2238:c>1236-987, c216-<16)] [lcl|scaffold_2238: raw, dna len= 1448] -> [gnl|ncbi|FUN_045924-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2238:c>1238-987, c216-<16)] [lcl|scaffold_2238: raw, dna len= 1448]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 16 of lcl|scaffold_2238 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2238:c>1238-987, c216-<16)] [lcl|scaffold_2238: raw, dna len= 1448]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2388:c>1217-1175, c963-860, c466-<351)] [lcl|scaffold_2388: delta, dna len= 1326] -> [gnl|ncbi|FUN_045971-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1217 of lcl|scaffold_2388 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2388:c>1217-1175, c963-860, c466-<351)] [lcl|scaffold_2388: delta, dna len= 1326] -> [gnl|ncbi|FUN_045971-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2388:c>1219-1175, c963-860, c466-<351)] [lcl|scaffold_2388: delta, dna len= 1326]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2443:c>1208-1157, c1052-974, c809-<444)] [lcl|scaffold_2443: raw, dna len= 1288]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1208 of lcl|scaffold_2443 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2443:c>1208-1157, c1052-974, c809-<444)] [lcl|scaffold_2443: raw, dna len= 1288]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2533:c>1166-1012, c607-510, c163-<85)] [lcl|scaffold_2533: raw, dna len= 1223]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1166 of lcl|scaffold_2533 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2533:c>1166-1012, c607-510, c163-<85)] [lcl|scaffold_2533: raw, dna len= 1223]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2563:c>875-625, c515-371, c232-<109)] [lcl|scaffold_2563: raw, dna len= 1203] -> [gnl|ncbi|FUN_046010-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 875 of lcl|scaffold_2563 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2563:c>875-625, c515-371, c232-<109)] [lcl|scaffold_2563: raw, dna len= 1203] -> [gnl|ncbi|FUN_046010-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2563:c>876-625, c515-371, c232-<109)] [lcl|scaffold_2563: raw, dna len= 1203]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2638:<183-270, 428-567, 845-1129)] [lcl|scaffold_2638: raw, dna len= 1165] -> [gnl|ncbi|FUN_046026-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 183 of lcl|scaffold_2638 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2638:<183-270, 428-567, 845-1129)] [lcl|scaffold_2638: raw, dna len= 1165] -> [gnl|ncbi|FUN_046026-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2638:<182-270, 428-567, 845-1129)] [lcl|scaffold_2638: raw, dna len= 1165]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [lcl|scaffold_2673:c>1102-235] [lcl|scaffold_2673: raw, dna len= 1155]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_2798:c1077-<3] [lcl|scaffold_2798: raw, dna len= 1121] -> [gnl|ncbi|FUN_046069-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2923:c>427-271, c163-<50)] [lcl|scaffold_2923: raw, dna len= 1099] -> [gnl|ncbi|FUN_046098-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 50 of lcl|scaffold_2923 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2923:c>427-271, c163-<50)] [lcl|scaffold_2923: raw, dna len= 1099] -> [gnl|ncbi|FUN_046098-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 50 of lcl|scaffold_2923 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2923:c>427-271, c163-<50)] [lcl|scaffold_2923: raw, dna len= 1099]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3058:c>938-789, c621-496, c367-<159)] [lcl|scaffold_3058: raw, dna len= 1074] -> [gnl|ncbi|FUN_046124-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3058:c>938-789, c621-496, c367-<159)] [lcl|scaffold_3058: raw, dna len= 1074] -> [gnl|ncbi|FUN_046124-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 938 of lcl|scaffold_3058 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3058:c>938-789, c621-496, c367-<159)] [lcl|scaffold_3058: raw, dna len= 1074] -> [gnl|ncbi|FUN_046124-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 159 of lcl|scaffold_3058 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3058:c>938-789, c621-496, c367-<159)] [lcl|scaffold_3058: raw, dna len= 1074] -> [gnl|ncbi|FUN_046124-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3058:c>940-789, c621-496, c367-<159)] [lcl|scaffold_3058: raw, dna len= 1074]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 159 of lcl|scaffold_3058 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3058:c>940-789, c621-496, c367-<159)] [lcl|scaffold_3058: raw, dna len= 1074]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3288:<106-223, 631-815)] [lcl|scaffold_3288: raw, dna len= 1038] -> [gnl|ncbi|FUN_046170-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 106 of lcl|scaffold_3288 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3288:<106-223, 631-815)] [lcl|scaffold_3288: raw, dna len= 1038] -> [gnl|ncbi|FUN_046170-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3288:<105-223, 631-815)] [lcl|scaffold_3288: raw, dna len= 1038]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 105 of lcl|scaffold_3288 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3288:<105-223, 631-815)] [lcl|scaffold_3288: raw, dna len= 1038]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3308:<556-621, 706-740, 831->958)] [lcl|scaffold_3308: raw, dna len= 1035] -> [gnl|ncbi|FUN_046173-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3308:<556-621, 706-740, 831->958)] [lcl|scaffold_3308: raw, dna len= 1035] -> [gnl|ncbi|FUN_046173-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 556 of lcl|scaffold_3308 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3308:<556-621, 706-740, 831->958)] [lcl|scaffold_3308: raw, dna len= 1035] -> [gnl|ncbi|FUN_046173-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 958 of lcl|scaffold_3308 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3308:<556-621, 706-740, 831->958)] [lcl|scaffold_3308: raw, dna len= 1035] -> [gnl|ncbi|FUN_046173-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3308:<555-621, 706-740, 831->958)] [lcl|scaffold_3308: raw, dna len= 1035]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 958 of lcl|scaffold_3308 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3308:<555-621, 706-740, 831->958)] [lcl|scaffold_3308: raw, dna len= 1035]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_3313:<828->1008] [lcl|scaffold_3313: raw, dna len= 1034] -> [gnl|ncbi|FUN_046174-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3538:c949-859, c599-<297)] [lcl|scaffold_3538: raw, dna len= 1002] -> [gnl|ncbi|FUN_046218-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 297 of lcl|scaffold_3538 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3538:c949-859, c599-<297)] [lcl|scaffold_3538: raw, dna len= 1002] -> [gnl|ncbi|FUN_046218-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 297 of lcl|scaffold_3538 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3538:c986-859, c599-<297)] [lcl|scaffold_3538: raw, dna len= 1002]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 241026 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c241807-241759, c241369-241026, c239037-238940, c238471-238279, c237554-237408)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006287-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 654429 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c655337-655273, c654533-654429, c653530-653427, c653069-652901, c652610-652560, c652324-652057)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006317-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 653530 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c655337-655273, c654533-654429, c653530-653427, c653069-652901, c652610-652560, c652324-652057)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006317-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c704911-704901, c704416-704411, c702550-702364)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006321-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1444195 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c1458476-1458417, c1457979-1457792, c1457331-1457163, c1455981-1455875, c1455518-1455348, c1454500-1454388, c1453593-1453434, c1452873-1452723, c1452415-1452311, c1451351-1451302, c1449165-1449070, c1448989-1448905, c1448024-1447891, c1446068-1445941, c1445039-1444903, c1444773-1444668, c1444352-1444195, c1443291-1443090, c1442606-1442443)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006390-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1467994 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c1478519-1478456, c1477325-1477241, c1476930-1476836, c1476302-1476163, c1474973-1474789, c1474451-1474385, c1473431-1473273, c1472556-1472443, c1470592-1470464, c1468480-1468376, c1468152-1467994, c1467602-1467495, c1466432-1465942, c1465535-1465456, c1465133-1465048, c1464808-1464665)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006393-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1591600 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:1583423-1583502, 1583824-1583884, 1584560-1584649, 1584728-1584871, 1589153-1589260, 1591441-1591600, 1592696-1592800, 1593427-1593542, 1593670-1593957)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006406-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:2978893-2979126, 2979504-2979666, 2979712-2979760, 2979828-2979946, 2980027-2980202, 2980474-2980485, 2980826-2981501, 2982052-2982332)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006518-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3139721-3140073, 3140100-3140186, 3142968-3143276, 3143578-3144199, 3144690-3144776, 3145218-3145449, 3145795-3146026, 3146602-3146614, 3146736-3147404, 3147493-3147629, 3148266-3148480, 3148857-3148975)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006530-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3272671 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3270076-3270141, 3270277-3270360, 3270542-3270588, 3270818-3270929, 3271031-3271218, 3271730-3271912, 3272100-3272194, 3272328-3272443, 3272596-3272671, 3272767-3272860, 3272977-3273147, 3273325-3273560, 3274364-3274554, 3275337-3275471, 3275984-3276181)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006542-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3338478 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3336725-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340485)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006554-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3339093 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3336725-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340485)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006554-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3338478 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3336725-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340467, 3342663-3343013)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006554-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3339093 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3336725-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340467, 3342663-3343013)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006554-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3385372 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3379751-3379819, 3380498-3380560, 3380888-3380993, 3381085-3381175, 3381440-3381952, 3382056-3382178, 3382471-3382578, 3382975-3383073, 3383310-3383411, 3383566-3383631, 3383774-3383833, 3384085-3384156, 3384255-3384323, 3384471-3384533, 3384664-3384738, 3384891-3385051, 3385316-3385372, 3385778-3385932, 3387921-3388067, 3388189-3388260, 3388619-3388627)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006559-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3385778 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:3379751-3379819, 3380498-3380560, 3380888-3380993, 3381085-3381175, 3381440-3381952, 3382056-3382178, 3382471-3382578, 3382975-3383073, 3383310-3383411, 3383566-3383631, 3383774-3383833, 3384085-3384156, 3384255-3384323, 3384471-3384533, 3384664-3384738, 3384891-3385051, 3385316-3385372, 3385778-3385932, 3387921-3388067, 3388189-3388260, 3388619-3388627)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006559-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4026544-4026945, 4030138-4030233, 4030869-4030896, 4031478-4031524, 4032838-4033316, 4034264-4034399, 4035334-4035424, 4036144-4036418, 4037016-4037126, 4038806-4038927, 4040256-4040325, 4040797-4040957, 4041145-4041158, 4041449-4041561)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006656-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4450157 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4448952-4449028, 4449339-4449409, 4449596-4449651, 4449781-4449943, 4450031-4450157, 4450265-4450465, 4450563-4450644, 4450765-4450893, 4450981-4451142)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006718-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4450157 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4449580-4449651, 4449781-4449943, 4450031-4450157, 4450265-4450465, 4450563-4450644, 4450765-4450893, 4450981-4451142)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006718-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4686600 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4686563-4686600, 4686926-4687070, 4687174-4687271, 4689320-4689350, 4689554-4689632, 4689992-4690141, 4690556-4690653, 4690869-4690991, 4691149-4691327, 4691559-4691649, 4691822-4691872, 4692129-4692216, 4692358-4692422, 4692527-4692581, 4692953-4693071)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006751-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4686926 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4686563-4686600, 4686926-4687070, 4687174-4687271, 4689320-4689350, 4689554-4689632, 4689992-4690141, 4690556-4690653, 4690869-4690991, 4691149-4691327, 4691559-4691649, 4691822-4691872, 4692129-4692216, 4692358-4692422, 4692527-4692581, 4692953-4693071)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006751-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4827094 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4826684-4827094, 4827554-4827649)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006766-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4918901 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:4915830-4915880, 4916104-4916208, 4916310-4916350, 4916480-4916560, 4916676-4916748, 4916825-4916902, 4917017-4917111, 4917255-4917367, 4917500-4917629, 4917850-4917955, 4918245-4918328, 4918446-4918547, 4918747-4918901, 4919048-4919206, 4919415-4919522, 4919700-4919886, 4920846-4920878)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006778-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:<5427012-5427183, 5427278-5427372, 5427595-5427711, 5427836-5427997, 5428431-5428579, 5428714-5428849, 5429007-5429114)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006843-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5427012 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:<5427012-5427183, 5427278-5427372, 5427595-5427711, 5427836-5427997, 5428431-5428579, 5428714-5428849, 5429007-5429114)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006843-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6227639 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:6225137-6225322, 6225987-6226132, 6226840-6226924, 6227198-6227298, 6227447-6227639, 6227897-6228049, 6229230-6229343, 6230126-6230338)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006904-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6283129 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c6286438-6286324, c6286226-6286117, c6283535-6283379, c6283223-6283129, c6282644-6282538, c6280166-6280061)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006910-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6283129 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c6286191-6286117, c6283535-6283379, c6283223-6283129, c6282644-6282538, c6280166-6280061)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006910-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6283129 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c6286438-6286324, c6286226-6286117, c6283535-6283379, c6283223-6283129, c6280166-6280083)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006910-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6491608 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c6492853-6492831, c6492640-6492559, c6492456-6492364, c6492242-6492108, c6491764-6491608, c6491517-6491437, c6491325-6491161, c6490957-6490885, c6490401-6490267, c6488386-6488266, c6487624-6487553)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006930-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6610797 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c6614077-6614072, c6613514-6613145, c6611012-6610797, c6610048-6609824, c6609291-6608900)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_006943-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:<7245436-7245466, 7248003->7248197)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007001-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7245436 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:<7245436-7245466, 7248003->7248197)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007001-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8477838 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:8477736-8477838, 8478074-8478168, 8478265-8478401, 8478524-8478690, 8478938-8479171, 8479659-8479708)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007141-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c8607691-8607543, c8603959-8603875, c8603718-8603535, c8600998-8600869, c8599489-8599308, c8599159-8599083, c8598999-8598946, c8598686-8598584, c8598548-8598538, c8598146-8597970)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007151-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8746285 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:8742934-8743095, 8743280-8743393, 8743515-8743575, 8743753-8743833, 8744717-8744902, 8745066-8745187, 8745337-8745443, 8745936-8746285, 8746310-8746475, 8746566-8746644)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007167-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8829445 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c8830051-8829861, c8829544-8829445, c8828879-8828757, c8828540-8828484, c8827991-8827889, c8827006-8826873, c8825958-8825857, c8825597-8825541, c8823121-8822993)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007178-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c10303196-10302950, c10302785-10302779, c10302454-10302439)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007317-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10443357 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10441698-10441732, 10442136-10442268, 10442511-10442661, 10442762-10442927, 10443035-10443130, 10443235-10443357, 10443733-10443830, 10443949-10444040, 10444210-10444442, 10444667-10444798, 10445060-10445285)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007331-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10909114 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c10911429-10911298, c10910768-10910701, c10909425-10909340, c10909208-10909114, c10908984-10908893, c10908622-10908524, c10908394-10908326, c10908207-10908115, c10908028-10907935, c10907726-10907629, c10907493-10907367, c10907231-10907133)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007386-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10980957 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982396, 10982665-10982720)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007393-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10982396 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982396, 10982665-10982720)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007393-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10982665 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982396, 10982665-10982720)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007393-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10980957 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982398, 10982665-10982781)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007393-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10982398 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982398, 10982665-10982781)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007393-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10982665 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982398, 10982665-10982781)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007393-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:12326310-12326413, 12326628-12326681, 12326854-12326898, 12327079-12327105, 12327213-12327239, 12327593-12327646, 12327760-12327822, 12327954-12328010, 12328092-12328227, 12328362-12328397, 12328582-12328644, 12328768-12328830, 12329028-12329090, 12329175-12329267, 12329421-12329471, 12329681-12329716, 12329813-12329875, 12330175-12330240, 12330330-12330365, 12330465-12330501, 12330600-12330608, 12330697-12330830, 12330916-12331022, 12331229-12331412, 12331556-12331727, 12331876-12331905, 12332048-12332652)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007518-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:12355001-12355076, 12355275-12355883, 12356072-12356674, 12356838-12357164, 12357189-12357392, 12357911-12358531, 12358758-12359318, 12359476-12360033, 12360150-12360722, 12360848-12361423, 12361566-12361915, 12362091-12362169, 12362281-12362426, 12362766-12362858, 12363156-12363209, 12363389-12363460, 12363553-12363579, 12363695-12363739, 12363894-12363947, 12364181-12364243, 12364704-12364769, 12364901-12364954, 12365267-12365329, 12365523-12365650, 12365691-12365736, 12366059-12366121, 12366235-12366285, 12366439-12366446, 12366537-12366599, 12366985-12367047, 12367169-12367187, 12367309-12367345, 12367609-12368102, 12368216-12368312, 12368429-12369085, 12369251-12369347, 12369461-12369624, 12369897-12370067, 12370386-12370439, 12370569-12370744)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007522-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12414853 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:12414118-12414196, 12414293-12414440, 12414745-12414853, 12415001-12415132)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007528-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12568400 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c12569306-12569232, c12568989-12568876, c12568583-12568400, c12568166-12568117, c12567998-12567906, c12567641-12567543, c12567385-12567249, c12567154-12566986)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007552-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12844944 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:12842923-12842947, 12843348-12843451, 12843566-12843661, 12844874-12844944, 12845028-12845089, 12845186-12845265, 12845888-12846022, 12846663-12846779, 12847572-12847654, 12847966-12848071, 12848241-12848255)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007592-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13053826 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c13055726-13055630, c13055473-13055219, c13054778-13054609, c13054477-13054412, c13054233-13054075, c13053978-13053826, c13053533-13053299, c13052698-13052575, c13052422-13052332)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007609-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13435763 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c13439929-13439825, c13439712-13439546, c13439406-13439350, c13439244-13439051, c13438759-13438650, c13438483-13438268, c13437818-13437715, c13437581-13437497, c13436826-13436767, c13436364-13436278, c13436156-13436124, c13435884-13435763, c13435644-13435555, c13435432-13435339, c13435047-13434817, c13434607-13434493, c13434393-13434212)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007643-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13435763 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c13439929-13439825, c13439712-13439546, c13439406-13439350, c13439244-13439051, c13438759-13438650, c13438483-13438268, c13437818-13437715, c13437581-13437497, c13436826-13436767, c13436364-13436278, c13436156-13436124, c13435884-13435763, c13435644-13435555, c13435432-13435339, c13435047-13434802)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007643-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13532662 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:13528974-13529038, 13529766-13529864, 13530256-13530379, 13530620-13530776, 13531024-13531113, 13531346-13531435, 13531801-13531879, 13532186-13532311, 13532594-13532662, 13532865-13533097, 13533267-13533404, 13533587-13534492, 13534653-13534822, 13534915-13534990, 13535302-13535477, 13536331-13536489, 13536772-13536831, 13536963-13537122, 13537257-13537347, 13537553-13537627, 13538003-13538141, 13538478-13538561)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007651-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14292782 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:14287576-14287659, 14288860-14288934, 14289085-14289212, 14289375-14289451, 14289722-14289771, 14289920-14290051, 14290140-14290220, 14290400-14290531, 14290635-14290682, 14290774-14290830, 14290986-14291044, 14291136-14291215, 14291375-14291489, 14291574-14291639, 14291824-14291969, 14292201-14292515, 14292628-14292782, 14292946-14293277, 14293441-14295898, 14296092-14296276, 14296400-14296504, 14296817-14296955, 14297111-14297224, 14297561-14298181)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007730-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:14396078-14396111, 14396450-14396482, 14396803-14396817, 14396993-14397067, 14397213-14397237, 14397383-14397413)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007754-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14590935 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c14592987-14592813, c14592678-14592530, c14592339-14592145, c14591990-14591832, c14591752-14591605, c14591494-14591377, c14591270-14591202, c14591113-14590935, c14590820-14590670, c14590587-14590442, c14590310-14590066)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007779-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14632193 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c14636818-14636800, c14636261-14636097, c14635869-14635615, c14635499-14635317, c14635177-14634949, c14634789-14633390, c14633245-14633013, c14632895-14632811, c14632671-14632522, c14632366-14632193, c14630244-14630156, c14630034-14629893, c14629784-14629660, c14629462-14629297, c14629184-14629051, c14628819-14628589)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007787-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c14650500-14650366, c14649535-14649527, c14649316-14649110)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007790-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14685360 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c14687651-14687594, c14687253-14687008, c14686872-14686743, c14686597-14686422, c14686215-14686046, c14685897-14685729, c14685442-14685360, c14685211-14685004, c14684813-14684625, c14684470-14684369, c14684108-14683962, c14683866-14683723, c14683607-14683511, c14683422-14683341, c14683246-14682698)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007794-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:14705504-14705565, 14706041-14706051, 14706582-14706823)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007796-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15353782 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:15348157-15348196, 15348884-15349008, 15349381-15349600, 15351265-15351338, 15351477-15351573, 15351843-15352025, 15352236-15352357, 15352896-15353040, 15353667-15353782, 15354056-15354200, 15354467-15354591, 15354810-15354951, 15355359-15355471)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007852-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15353782 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:15348157-15348196, 15348884-15349008, 15349381-15349600, 15351265-15351338, 15351477-15351573, 15351843-15352025, 15352236-15352357, 15352896-15353040, 15353667-15353782, 15354056-15354200, 15354467-15354591, 15354810-15354951, 15355359-15355394, 15356748-15356889, 15357253-15357352, 15357535-15357537)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007852-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16316930 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:16314787-16314957, 16315266-16315361, 16316020-16316253, 16316908-16316930, 16317518-16317633, 16317889-16318442)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_007949-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17028255 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:17025340-17025461, 17025585-17025604, 17025898-17026344, 17026593-17026859, 17027099-17027334, 17028091-17028255, 17029231-17029429, 17029910-17030208, 17030416-17030577, 17031073-17031113, 17031337-17031494, 17031642-17031754, 17031853-17032188)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008037-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17028255 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:17027122-17027334, 17028091-17028255, 17029231-17029429, 17029910-17030208, 17030416-17030577, 17031073-17031113, 17031337-17031494, 17031642-17031754, 17031853-17032147, 17032362-17032525, 17032688-17032829, 17032944-17033122)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008037-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17569378 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:c17576574-17576536, c17575226-17575164, c17574476-17574240, c17571090-17570917, c17570565-17570512, c17570417-17570325, c17569620-17569551, c17569437-17569378, c17569257-17569119, c17569032-17568993, c17568887-17568820, c17568357-17568276, c17568122-17568078)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008093-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:18772250-18772795, 18773129-18773199, 18773921-18773984, 18776251-18776370, 18778115-18778168, 18778712-18778722, 18779321-18779336)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008189-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:19117451-19117481, 19117746-19117879, 19118280-19118407, 19119060-19119219, 19119585-19119688, 19121088-19121205, 19121509-19121663, 19121901-19122001, 19122132-19122142, 19122289-19122544, 19122635-19122806, 19123429-19124101, 19124253-19124396, 19124554-19124667, 19124806-19124855, 19127875-19127931, 19128217-19128247)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008224-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:19361197-19361215, 19362462-19362604, 19363193-19363318, 19363588-19363630, 19363991-19364072, 19364341-19364385, 19364636-19364688, 19364795-19364912, 19365732-19365819, 19366234->19366323)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008252-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 19366323 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:19361197-19361215, 19362462-19362604, 19363193-19363318, 19363588-19363630, 19363991-19364072, 19364341-19364385, 19364636-19364688, 19364795-19364912, 19365732-19365819, 19366234->19366323)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008252-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19752930 of lcl|scaffold_4 FEATURE: CDS: hypothetical protein [(lcl|scaffold_4:19752333-19752548, 19752814-19752930, 19753057-19753168, 19753285-19753352, 19753667-19753798)] [lcl|scaffold_4: delta, dna len= 19756009] -> [gnl|ncbi|FUN_008288-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 241026 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c241811-241759, c241369-241026, c239037-238940, c238471-238279, c237554-237069)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 654429 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c655418-655273, c654533-654429, c653530-653427, c653069-652901, c652610-652560, c652324-651237)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 653530 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c655418-655273, c654533-654429, c653530-653427, c653069-652901, c652610-652560, c652324-651237)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1444195 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c1458476-1458417, c1457979-1457792, c1457331-1457163, c1455981-1455875, c1455518-1455348, c1454500-1454388, c1453593-1453434, c1452873-1452723, c1452415-1452311, c1451351-1451302, c1449165-1449070, c1448989-1448905, c1448024-1447891, c1446068-1445941, c1445039-1444903, c1444773-1444668, c1444352-1444195, c1443291-1443090, c1442606-1442443)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1467994 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c1478634-1478456, c1477325-1477241, c1476930-1476836, c1476302-1476163, c1474973-1474789, c1474451-1474385, c1473431-1473273, c1472556-1472443, c1470592-1470464, c1468480-1468376, c1468152-1467994, c1467602-1467495, c1466432-1465942, c1465535-1465456, c1465133-1465048, c1464808-1464247)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1591600 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:1582896-1582937, 1583383-1583502, 1583824-1583884, 1584560-1584649, 1584728-1584871, 1589153-1589260, 1591441-1591600, 1592696-1592800, 1593427-1593542, 1593670-1593957)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1973329 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:1972931-1973329, 1973857-1974090)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1979722 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:1974290-1974392, 1974501-1976316, 1976571-1976654, 1976924-1977007, 1977351-1977434, 1977653-1977736, 1977818-1977901, 1978082-1978165, 1978301-1978384, 1979641-1979722, 1980877-1981588)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3272671 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3269198-3269491, 3269892-3270141, 3270277-3270360, 3270542-3270588, 3270818-3270929, 3271031-3271218, 3271730-3271912, 3272100-3272194, 3272328-3272443, 3272596-3272671, 3272767-3272860, 3272977-3273147, 3273325-3273560, 3274364-3274554, 3275337-3275471, 3275984-3276181)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3338478 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3336319-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340591)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3339093 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3336319-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340591)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3338478 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3336319-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340467, 3342663-3343929)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3339093 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3336319-3336960, 3337238-3337398, 3337664-3337813, 3338117-3338254, 3338427-3338478, 3339093-3339195, 3339348-3339460, 3340365-3340467, 3342663-3343929)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3385372 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3379590-3379819, 3380498-3380560, 3380888-3380993, 3381085-3381175, 3381440-3381952, 3382056-3382178, 3382471-3382578, 3382975-3383073, 3383310-3383411, 3383566-3383631, 3383774-3383833, 3384085-3384156, 3384255-3384323, 3384471-3384533, 3384664-3384738, 3384891-3385051, 3385316-3385372, 3385778-3385932, 3387921-3388067, 3388189-3388260, 3388619-3388920)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3385778 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:3379590-3379819, 3380498-3380560, 3380888-3380993, 3381085-3381175, 3381440-3381952, 3382056-3382178, 3382471-3382578, 3382975-3383073, 3383310-3383411, 3383566-3383631, 3383774-3383833, 3384085-3384156, 3384255-3384323, 3384471-3384533, 3384664-3384738, 3384891-3385051, 3385316-3385372, 3385778-3385932, 3387921-3388067, 3388189-3388260, 3388619-3388920)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3876903 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c3880833-3876903, c3876733-3876613)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4450157 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:4448706-4449028, 4449339-4449409, 4449596-4449651, 4449781-4449943, 4450031-4450157, 4450265-4450465, 4450563-4450644, 4450765-4450893, 4450981-4451443)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4450157 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:4449387-4449651, 4449781-4449943, 4450031-4450157, 4450265-4450465, 4450563-4450644, 4450765-4450893, 4450981-4451443)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4686600 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:4686510-4686600, 4686926-4687070, 4687174-4687271, 4689320-4689350, 4689554-4689632, 4689992-4690141, 4690556-4690653, 4690869-4690991, 4691149-4691327, 4691559-4691649, 4691822-4691872, 4692129-4692216, 4692358-4692422, 4692527-4692581, 4692953-4694496)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4686926 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:4686510-4686600, 4686926-4687070, 4687174-4687271, 4689320-4689350, 4689554-4689632, 4689992-4690141, 4690556-4690653, 4690869-4690991, 4691149-4691327, 4691559-4691649, 4691822-4691872, 4692129-4692216, 4692358-4692422, 4692527-4692581, 4692953-4694496)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4827094 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:4826648-4827094, 4827554-4828046)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4918901 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:4915608-4915880, 4916104-4916208, 4916310-4916350, 4916480-4916560, 4916676-4916748, 4916825-4916902, 4917017-4917111, 4917255-4917367, 4917500-4917629, 4917850-4917955, 4918245-4918328, 4918446-4918547, 4918747-4918901, 4919048-4919206, 4919415-4919522, 4919700-4919886, 4920846-4921151)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:<5427011-5427183, 5427278-5427372, 5427595-5427711, 5427836-5427997, 5428431-5428579, 5428714-5428849, 5429007-5431485)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6227639 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:6224854-6224878, 6225053-6225322, 6225987-6226132, 6226840-6226924, 6227198-6227298, 6227447-6227639, 6227897-6228049, 6229230-6229343, 6230126-6230338)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6283129 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c6286859-6286324, c6286226-6286117, c6283535-6283379, c6283223-6283129, c6282644-6282538, c6280166-6279742)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6283129 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c6286859-6286679, c6286226-6286117, c6283535-6283379, c6283223-6283129, c6282644-6282538, c6280166-6279742)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6283129 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c6286859-6286324, c6286226-6286117, c6283535-6283379, c6283223-6283129, c6280166-6279742)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6491608 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c6493322-6493260, c6493074-6493009, c6492904-6492831, c6492640-6492559, c6492456-6492364, c6492242-6492108, c6491764-6491608, c6491517-6491437, c6491325-6491161, c6490957-6490885, c6490401-6490267, c6488386-6488266, c6487624-6487553)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6610797 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c6614077-6614072, c6613514-6613145, c6611012-6610797, c6610048-6609824, c6609291-6608900)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7245436 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:<7245436-7245466, 7248003->7248197)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8477838 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:8477722-8477838, 8478074-8478168, 8478265-8478401, 8478524-8478690, 8478938-8479171, 8479659-8479708)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8746285 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:8742875-8743095, 8743280-8743393, 8743515-8743575, 8743753-8743833, 8744717-8744902, 8745066-8745187, 8745337-8745443, 8745936-8746285, 8746310-8746475, 8746566-8746734)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8829445 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c8830065-8829861, c8829544-8829445, c8828879-8828757, c8828540-8828484, c8827991-8827889, c8827006-8826873, c8825958-8825857, c8825597-8825541, c8823121-8822992, c8822898-8822531)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10443357 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10441010-10441278, 10441631-10441732, 10442136-10442268, 10442511-10442661, 10442762-10442927, 10443035-10443130, 10443235-10443357, 10443733-10443830, 10443949-10444040, 10444210-10444442, 10444667-10444798, 10445060-10445300)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10909114 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c10911996-10911875, c10911479-10911298, c10910768-10910701, c10909425-10909340, c10909208-10909114, c10908984-10908893, c10908622-10908524, c10908394-10908326, c10908207-10908115, c10908028-10907935, c10907726-10907629, c10907493-10907367, c10907231-10906508)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10980957 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982396, 10982665-10983118)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10982396 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982396, 10982665-10983118)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10982665 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982396, 10982665-10983118)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10980957 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982398, 10982665-10983118)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10982398 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982398, 10982665-10983118)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10982665 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:10976005-10976243, 10976468-10976622, 10976830-10977402, 10977622-10977744, 10977929-10978054, 10979076-10979198, 10979439-10979561, 10980246-10980368, 10980547-10980957, 10981257-10981409, 10982304-10982398, 10982665-10983118)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12414853 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:12414105-12414196, 12414293-12414440, 12414745-12414853, 12415001-12415190)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12568400 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c12569380-12569232, c12568989-12568876, c12568583-12568400, c12568166-12568117, c12567998-12567906, c12567641-12567543, c12567385-12567249, c12567154-12566549)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12844944 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:12842923-12842947, 12843348-12843451, 12843566-12843661, 12844874-12844944, 12845028-12845089, 12845186-12845265, 12845888-12846022, 12846663-12846779, 12847572-12847654, 12847966-12848071, 12848241-12848255)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13053826 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c13055726-13055630, c13055473-13055219, c13054778-13054609, c13054477-13054412, c13054233-13054075, c13053978-13053826, c13053533-13053299, c13052698-13052575, c13052422-13052332)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13435763 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c13439929-13439825, c13439712-13439546, c13439406-13439350, c13439244-13439051, c13438759-13438650, c13438483-13438268, c13437818-13437715, c13437581-13437497, c13436826-13436767, c13436364-13436278, c13436156-13436124, c13435884-13435763, c13435644-13435555, c13435432-13435339, c13435047-13434817, c13434607-13434493, c13434393-13432313)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13435763 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c13439929-13439825, c13439712-13439546, c13439406-13439350, c13439244-13439051, c13438759-13438650, c13438483-13438268, c13437818-13437715, c13437581-13437497, c13436826-13436767, c13436364-13436278, c13436156-13436124, c13435884-13435763, c13435644-13435555, c13435432-13435339, c13435047-13434493, c13434393-13432313)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13532662 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:13528577-13529038, 13529766-13529864, 13530256-13530379, 13530620-13530776, 13531024-13531113, 13531346-13531435, 13531801-13531879, 13532186-13532311, 13532594-13532662, 13532865-13533097, 13533267-13533404, 13533587-13534492, 13534653-13534822, 13534915-13534990, 13535302-13535477, 13536331-13536489, 13536772-13536831, 13536963-13537122, 13537257-13537347, 13537553-13537627, 13538003-13538141, 13538478-13539801)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14292782 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:14287442-14287659, 14288860-14288934, 14289085-14289212, 14289375-14289451, 14289722-14289771, 14289920-14290051, 14290140-14290220, 14290400-14290531, 14290635-14290682, 14290774-14290830, 14290986-14291044, 14291136-14291215, 14291375-14291489, 14291574-14291639, 14291824-14291969, 14292201-14292515, 14292628-14292782, 14292946-14293277, 14293441-14295898, 14296092-14296276, 14296400-14296504, 14296817-14296955, 14297111-14297224, 14297561-14298906)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14590935 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c14593360-14593209, c14593000-14592813, c14592678-14592530, c14592339-14592145, c14591990-14591832, c14591752-14591605, c14591494-14591377, c14591270-14591202, c14591113-14590935, c14590820-14590670, c14590587-14590442, c14590310-14589610)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14632193 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c14636818-14636800, c14636261-14636097, c14635869-14635615, c14635499-14635317, c14635177-14634949, c14634789-14633390, c14633245-14633013, c14632895-14632811, c14632671-14632522, c14632366-14632193, c14630244-14630156, c14630034-14629893, c14629784-14629660, c14629462-14629297, c14629184-14629051, c14628819-14628208)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14685360 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c14687651-14687594, c14687253-14687008, c14686872-14686743, c14686597-14686422, c14686215-14686046, c14685897-14685729, c14685442-14685360, c14685211-14685004, c14684813-14684625, c14684470-14684369, c14684108-14683962, c14683866-14683723, c14683607-14683511, c14683422-14683341, c14683246-14682494)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15353782 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:15348157-15348196, 15348884-15349008, 15349381-15349600, 15351265-15351338, 15351477-15351573, 15351843-15352025, 15352236-15352357, 15352896-15353040, 15353667-15353782, 15354056-15354200, 15354467-15354591, 15354810-15354951, 15355359-15355644)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15353782 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:15348157-15348196, 15348884-15349008, 15349381-15349600, 15351265-15351338, 15351477-15351573, 15351843-15352025, 15352236-15352357, 15352896-15353040, 15353667-15353782, 15354056-15354200, 15354467-15354591, 15354810-15354951, 15355359-15355394, 15356748-15356889, 15357253-15357352, 15357535-15357571)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15929326 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c15942188-15941752, c15941232-15941083, c15940647-15940479, c15939663-15939552, c15939040-15938858, c15938577-15938445, c15938307-15938117, c15937946-15937808, c15937697-15937600, c15937438-15936403, c15936030-15935891, c15935800-15935643, c15934829-15934648, c15934420-15933995, c15933883-15933612, c15933485-15933328, c15933046-15932895, c15932481-15932347, c15932222-15932064, c15929947-15929326, c15929301-15929262, c15929213-15927515)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15929262 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c15942188-15941752, c15941232-15941083, c15940647-15940479, c15939663-15939552, c15939040-15938858, c15938577-15938445, c15938307-15938117, c15937946-15937808, c15937697-15937600, c15937438-15936403, c15936030-15935891, c15935800-15935643, c15934829-15934648, c15934420-15933995, c15933883-15933612, c15933485-15933328, c15933046-15932895, c15932481-15932347, c15932222-15932064, c15929947-15929326, c15929301-15929262, c15929213-15927515)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16316930 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:16314740-16314957, 16315266-16315361, 16316020-16316253, 16316908-16316930, 16317518-16317633, 16317889-16318755)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16956749 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:16954994-16955236, 16955324-16955428, 16955690-16955833, 16956027-16956178, 16956310-16956407, 16956576-16956749, 16957653-16958132)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17028255 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:17023650-17023944, 17025340-17025461, 17025585-17025604, 17025898-17026344, 17026593-17026859, 17027099-17027334, 17028091-17028255, 17029231-17029429, 17029910-17030208, 17030416-17030577, 17031073-17031113, 17031337-17031494, 17031642-17031754, 17031853-17032525, 17032688-17032829, 17032944-17033607)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17028255 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:17026991-17027334, 17028091-17028255, 17029231-17029429, 17029910-17030208, 17030416-17030577, 17031073-17031113, 17031337-17031494, 17031642-17031754, 17031853-17032147, 17032362-17032525, 17032688-17032829, 17032944-17033607)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17569378 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c17576574-17576536, c17575226-17575164, c17574476-17574240, c17571090-17570917, c17570565-17570512, c17570417-17570325, c17569620-17569551, c17569437-17569378, c17569257-17569119, c17569032-17568993, c17568887-17568820, c17568357-17568276, c17568122-17568078)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 17581626 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:17581549-17581626, 17582147-17582230, 17582353-17582482, 17582761-17582887, 17583053-17583209, 17583924-17584119, 17584493-17584645, 17584750-17584926, 17585376-17587636)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 17582147 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:17581549-17581626, 17582147-17582230, 17582353-17582482, 17582761-17582887, 17583053-17583209, 17583924-17584119, 17584493-17584645, 17584750-17584926, 17585376-17587636)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 19128359 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:19117451-19117481, 19117746-19117879, 19118280-19118407, 19119060-19119219, 19119585-19119688, 19121088-19121205, 19121509-19121663, 19121901-19122001, 19122132-19122142, 19122289-19122544, 19122635-19122806, 19123429-19124101, 19124253-19124396, 19124554-19124667, 19124806-19124855, 19127875-19127931, 19128217-19128359, 19128386-19128582)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 19128386 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:19117451-19117481, 19117746-19117879, 19118280-19118407, 19119060-19119219, 19119585-19119688, 19121088-19121205, 19121509-19121663, 19121901-19122001, 19122132-19122142, 19122289-19122544, 19122635-19122806, 19123429-19124101, 19124253-19124396, 19124554-19124667, 19124806-19124855, 19127875-19127931, 19128217-19128359, 19128386-19128582)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19337810 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c19338236-19337810, c19337181-19336091)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 19366323 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:19361197-19361215, 19362462-19362604, 19363193-19363318, 19363588-19363630, 19363991-19364072, 19364341-19364385, 19364636-19364688, 19364795-19364912, 19365732-19365819, 19366234->19366323)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 19502789 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c>19516341-19516188, c19515882-19515762, c19515677-19515572, c19515498-19515442, c19515358-19515260, c19514561-19514463, c19513183-19513097, c19512972-19512873, c19512779-19512640, c19511758-19511618, c19511298-19511218, c19511054-19510938, c19510352-19510236, c19509911-19509804, c19509693-19509591, c19509176-19509034, c19508891-19508824, c19508353-19508255, c19508026-19507939, c19506745-19506461, c19506160-19505993, c19505874-19505663, c19505289-19505208, c19505041-19504947, c19504762-19504594, c19503562-19503344, c19503267-19502789, c19502626-19502606)] [lcl|scaffold_4: delta, dna len= 19756009]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 19502626 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:c>19516341-19516188, c19515882-19515762, c19515677-19515572, c19515498-19515442, c19515358-19515260, c19514561-19514463, c19513183-19513097, c19512972-19512873, c19512779-19512640, c19511758-19511618, c19511298-19511218, c19511054-19510938, c19510352-19510236, c19509911-19509804, c19509693-19509591, c19509176-19509034, c19508891-19508824, c19508353-19508255, c19508026-19507939, c19506745-19506461, c19506160-19505993, c19505874-19505663, c19505289-19505208, c19505041-19504947, c19504762-19504594, c19503562-19503344, c19503267-19502789, c19502626-19502606)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 19752930 of lcl|scaffold_4 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_4:19752202-19752548, 19752814-19752930, 19753057-19753168, 19753285-19753352, 19753667-19754545)] [lcl|scaffold_4: delta, dna len= 19756009]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 66928 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:64324-64461, 64854-64916, 66754-66928, 67096-67232, 67506-67568, 67765-67887)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_015904-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c509883-509872, c509633-509552, c508956-508830, c508096-508006, c507315-507227, c504830-504735, c504050-503966, c500388-500104, c496848-496750, c496392-496379, c495291-495090)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_015949-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1665747 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c1665768-1665747, c1665602-1665559, c1665446-1665171)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016076-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1665559 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c1665768-1665747, c1665602-1665559, c1665446-1665171)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016076-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2638698 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:2591049-2591103, 2591564-2591624, 2591728-2591964, 2592647-2592690, 2598883-2598996, 2609612-2609715, 2614734-2614842, 2618368-2618526, 2622212-2622249, 2629488-2629567, 2629693-2629737, 2630624-2630668, 2632440-2632483, 2632870-2632956, 2636900-2636985, 2638578-2638698, 2639490-2639584, 2639927-2640047, 2641077-2641165, 2641616-2641705)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016165-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3274844 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c3282595-3282473, c3281699-3281627, c3281343-3281246, c3280390-3280271, c3279851-3279795, c3279343-3279281, c3279154-3279083, c3278730-3278592, c3278180-3278119, c3277767-3277584, c3277338-3277239, c3275399-3275306, c3274926-3274844, c3272918-3272821, c3272587-3272529, c3272405-3272302, c3271887-3271814, c3271716-3271655, c3269083-3269042)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016225-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3735907 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c3738033-3738028, c3737513-3737417, c3737120-3736984, c3736629-3736534, c3736018-3735907, c3735529-3735420, c3734720-3734504, c3734459-3734282, c3733898-3733585, c3733042-3732785, c3732004-3731967)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016270-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3735529 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c3738033-3738028, c3737513-3737417, c3737120-3736984, c3736629-3736534, c3736018-3735907, c3735529-3735420, c3734720-3734504, c3734459-3734282, c3733898-3733585, c3733042-3732785, c3732004-3731967)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016270-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c3777645-3777608, c3777324-3777316, c3775613-3775277)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016275-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3795846 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:3792794-3792895, 3793932-3794015, 3794331-3794495, 3794917-3795095, 3795785-3795846, 3796471-3796588, 3796742-3796914, 3797259-3797663, 3797765-3797938, 3798035-3798421, 3801313-3801356)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016277-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4206311 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:4198274-4198408, 4198713-4198846, 4198941-4199041, 4199293-4199424, 4199532-4199627, 4199728-4199832, 4200165-4200256, 4203550-4203656, 4203774-4203934, 4206166-4206311, 4206880-4207599)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016312-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4206311 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:4198809-4198846, 4198941-4199041, 4199293-4199424, 4199532-4199627, 4199728-4199832, 4200165-4200256, 4203550-4203656, 4203774-4203934, 4204075-4204343, 4206162-4206311, 4206880-4207599)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016312-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c4614466-4614284, c4614193-4614023, c4613934-4613802, c4613391-4613273, c4613047-4613005, c4612884-4612773, c4612587-4612460, c4611864-4611632, c4611455-4611321, c4610689-4610576, c4610372-4610258, c4610002-4609878, c4609547-4609372, c4609288-4609129, c4608884-4608789, c4608644-4608477, c4608379-4608281, c4608148-4607981, c4605593-4605444, c4605216-4605011, c4604890-4604735, c4603790-4603676, c4602651-4602481, c4601954-4601796, c4601719-4601651, c4601232-4601078, c4600755-4600623, c4600435-4600318, c4600212-4600100, c4599895-4599782, c4599489-4599339, c4596189-4595984, c4595594-4595412, c4595144-4594962, c4593965-4593870, c4593298-4593075, c4592893-4592778, c4592009-4591810, c4591230-4591099, c4590844-4590712, c4589868-4589661, c4589403-4589274, c4588661-4588506, c458699...] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016334-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c4731250-4731136, c4728743-4728730, c4728311-4728226, c4727683-4727448, c4726391-4726270, c4725984-4725860, c4725743-4725575, c4725172-4725046, c4722434-4722317, c4722082-4721845, c4721466-4721308, c4720985-4720677, c4720416-4720250, c4718174-4717130)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016345-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4847754 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c4848644-4848463, c4848379-4848311, c4848116-4847992, c4847883-4847754, c4847565-4847495, c4847406-4847075)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016360-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:5005089-5005206, 5005631-5005893, 5006165-5006176, 5006600-5006679, 5006877-5006999, 5007223-5007259, 5007558-5007638, 5007778-5007823, 5008293-5008354, 5008953-5009021, 5009131-5009209, 5009399-5009515, 5009639-5009691, 5010344-5010445)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016382-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5029638 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:5027796-5027814, 5028003-5028090, 5028209-5028323, 5028486-5028567, 5028692-5028817, 5029063-5029212, 5029565-5029638, 5029756-5030295)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016386-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5040751 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c5041409-5041338, c5041145-5040984, c5040810-5040751, c5040639-5040535, c5040422-5040233, c5039795-5039554, c5039455-5039255, c5039112-5039040, c5038872-5038634, c5038419-5038300)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016388-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5227397 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c5229733-5229683, c5229081-5229020, c5228732-5228560, c5227502-5227397, c5227108-5227049, c5226806-5226675, c5226565-5226424, c5226290-5226117, c5226004-5225888, c5225633-5225361, c5225225-5225145, c5224760-5224656, c5224523-5224417, c5224289-5224139, c5224029-5223996, c5223865-5223734, c5223592-5223396, c5223282-5223193)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016409-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5227108 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c5229733-5229683, c5229081-5229020, c5228732-5228560, c5227502-5227397, c5227108-5227049, c5226806-5226675, c5226565-5226424, c5226290-5226117, c5226004-5225888, c5225633-5225361, c5225225-5225145, c5224760-5224656, c5224523-5224417, c5224289-5224139, c5224029-5223996, c5223865-5223734, c5223592-5223396, c5223282-5223193)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016409-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:5245386-5245403, 5246785-5246904, 5247018-5247119, 5250058-5250132, 5250609-5250687, 5250799-5250911, 5251126-5251225, 5251418-5251514, 5251871-5251945, 5252132-5252288, 5252678-5252842, 5252995-5253116, 5253383-5253569, 5253979-5254114, 5254321-5254416, 5254567-5254685, 5254766-5254899, 5254985-5255226, 5255322-5255514, 5255907-5256123, 5256378-5256482, 5256722-5256825, 5259066-5259149, 5259302-5259461, 5259601-5259748, 5260002-5260207, 5260313-5260487, 5260782-5260990, 5261149-5261495, 5261607-5261739, 5261857-5262017, 5262175-5262340, 5262510-5262596, 5262977-5263203, 5263618-5264062, 5264211-5264768, 5264886-5265086, 5265173-5265284, 5265424-5265567, 5265664-5265937, 5266090-5266207, 5266354-5266486, 5266606-5266700, 5266856-5266991, 5267142-5267328, 5267482-5267593,...] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016412-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5253569 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:5245386-5245403, 5246785-5246904, 5247018-5247119, 5250058-5250132, 5250609-5250687, 5250799-5250911, 5251126-5251225, 5251418-5251514, 5251871-5251945, 5252132-5252288, 5252678-5252842, 5252995-5253116, 5253383-5253569, 5253979-5254114, 5254321-5254416, 5254567-5254685, 5254766-5254899, 5254985-5255226, 5255322-5255514, 5255907-5256123, 5256378-5256482, 5256722-5256825, 5259066-5259149, 5259302-5259461, 5259601-5259748, 5260002-5260207, 5260313-5260487, 5260782-5260990, 5261149-5261495, 5261607-5261739, 5261857-5262017, 5262175-5262340, 5262510-5262596, 5262977-5263203, 5263618-5264062, 5264211-5264768, 5264886-5265086, 5265173-5265284, 5265424-5265567, 5265664-5265937, 5266090-5266207, 5266354-5266486, 5266606-5266700, 5266856-5266991, 5267142-5267328, 5267482-5267593,...] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016412-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5460126 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c5464294-5464196, c5463556-5463389, c5463160-5463054, c5462782-5462698, c5462141-5462058, c5461923-5461730, c5461572-5461383, c5461278-5461181, c5460999-5460819, c5460597-5460504, c5460255-5460126, c5459532-5459343, c5459251-5459118, c5458684-5458582)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016434-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5473471 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:5472541-5472579, 5473134-5473217, 5473311-5473471, 5473746-5473880, 5473968-5474154)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016436-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5473746 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:5472541-5472579, 5473134-5473217, 5473311-5473471, 5473746-5473880, 5473968-5474154)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016436-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6288566 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c6289302-6289300, c6288886-6288790, c6288615-6288566, c6288482-6288443, c6288340-6288266, c6288119-6288046, c6287933-6287862)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016542-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:7270179-7270260, 7271459-7271467, 7272467-7272591, 7273011-7273182, 7273415-7273636, 7274887-7275092, 7278355-7278436, 7278758-7278926, 7279057-7279223, 7279333-7279454, 7281293-7281524, 7282466-7282587, 7284700-7284871, 7286497-7286748, 7291716-7291758, 7293654-7293808, 7294164-7294202, 7296403-7296783, 7297385-7297480, 7297699-7297815, 7299130-7299274, 7299907-7300140, 7300271-7300764, 7300958-7301147, 7302704-7302845, 7303114-7303182)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016639-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:7769628-7769642, 7772116-7772169, 7772847-7772986, 7773111-7773201, 7773408-7773487, 7773580-7773660, 7774561-7774729, 7774916-7775008, 7775177-7775275, 7775824-7775925, 7776333-7776436, 7777089-7777197, 7777502-7777588, 7777780-7777951, 7778048-7778180, 7778288-7778395, 7778826-7779081, 7779172-7779354, 7779471-7779557, 7780115-7780374, 7780596-7780785, 7780989-7781113, 7781607-7781664, 7781810-7781901, 7782226-7782398, 7782526-7782686, 7783465-7783575, 7784151-7784305, 7784705-7784804, 7784897-7785068, 7785392-7785645, 7785731-7785874, 7785973-7786141, 7786234-7786324, 7786418-7786500, 7786786-7786936, 7787390-7787493, 7787584-7787769, 7788505-7788706, 7789007-7789128, 7789214-7789401, 7789498-7789592, 7789702-7790294, 7790503-7790600, 7790726-7790896, 7791033-7791173,...] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016702-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8048696 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c8058841-8058716, c8058043-8057636, c8057487-8056969, c8056143-8055807, c8055473-8055334, c8055190-8054877, c8054639-8054444, c8054280-8054086, c8053235-8053006, c8051623-8051561, c8051173-8051075, c8049365-8049301, c8049093-8048936, c8048860-8048696, c8048602-8048456, c8048341-8048200, c8047271-8047059, c8046938-8046804, c8046635-8046487, c8046037-8045901, c8045814-8045684, c8045549-8045419, c8045285-8045183, c8045014-8044947, c8044231-8044186, c8044074-8044048, c8043749-8043402, c8043257-8043171, c8042857-8042819, c8042702-8042659)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016730-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:8199232-8199330, 8199377-8199384, 8199503-8199743)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016749-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c8459112-8459075, c8458836-8458826, c8458162-8458128, c8457432-8457331, c8457115-8457005, c8455130-8455026, c8454540-8454411, c8453996-8453884)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016782-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c8948213-8948110, c8946809-8946645, c8946380-8946335, c8945939-8945838, c8945579-8945496, c8945323-8945158, c8944955-8944862, c8944735-8944677, c8944400-8944389, c8944076-8944032, c8943741-8943664, c8942940-8942825, c8942680-8942607, c8942451-8942385, c8942061-8941988, c8941801-8941678, c8941464-8941347, c8941089-8940953, c8940870-8940762, c8940143-8940067, c8939955-8939909, c8939673-8939568, c8938978-8938865, c8938718-8938656)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016809-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c9542298-9542282, c9541319-9541289, c9540104-9539959, c9539723-9539632, c9539371-9539364, c9538615-9538541, c9538318-9538235, c9538117-9538040, c9537898-9537788, c9537312-9537190, c9537054-9537007)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016855-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:10814830-10814882, 10815118-10815128, 10815208-10815353)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_016975-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11822521 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c11825448-11824744, c11823533-11823425, c11823266-11823000, c11822799-11822737, c11822578-11822521, c11822335-11822195, c11822101-11821978, c11821783-11821628)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017102-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11889098 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:11885067-11885069, 11885180-11885378, 11885703-11885872, 11886008-11886216, 11886390-11886540, 11886750-11886873, 11887712-11887831, 11888099-11888191, 11888334-11888475, 11888992-11889098, 11889192-11889301, 11889806-11889943)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017114-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12222945 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c12224984-12224868, c12224203-12223922, c12223769-12223547, c12223442-12223225, c12223051-12222945, c12222792-12222684, c12222569-12222472, c12222033-12221997, c12221562-12221370, c12221273-12221175, c12220889-12220657)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017157-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:12470426-12470453, 12470561-12470572, 12470872-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476190, 12476333-12476847)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017189-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12471056 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:12470426-12470453, 12470561-12470572, 12470872-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476190, 12476333-12476847)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017189-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12471056 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:12470991-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476190, 12476333-12476847)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017189-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:12470426-12470453, 12470561-12470572, 12470872-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476279)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017189-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12471056 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:12470426-12470453, 12470561-12470572, 12470872-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476279)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017189-T3]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:<12565695-12565740, 12565846-12566156)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017197-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12565695 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:<12565695-12565740, 12565846-12566156)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017197-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13038869 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:13036967-13037123, 13037577-13037924, 13038185-13038306, 13038488-13038613, 13038792-13038869, 13039170-13039265, 13039390-13039467, 13039800-13040038, 13040264-13040309)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017246-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13054906 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c13088725-13088564, c13088278-13088095, c13087851-13087736, c13087045-13087008, c13086133-13086062, c13084710-13084587, c13083347-13083228, c13082670-13082581, c13080803-13080721, c13079058-13078986, c13078723-13078595, c13078352-13078218, c13078060-13077859, c13076878-13076793, c13076573-13076490, c13076356-13076204, c13076031-13075777, c13075536-13075414, c13075207-13075125, c13074818-13074696, c13074418-13074339, c13074162-13073975, c13073863-13073798, c13073635-13073543, c13073381-13073258, c13073124-13073003, c13072841-13072758, c13072659-13072567, c13072389-13072271, c13072055-13071986, c13070434-13070321, c13070063-13069992, c13069606-13069457, c13068988-13068905, c13068799-13068703, c13068081-13067696, c13067602-13067548, c13067348-13067227, c13067023-13066909, c...] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017251-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:13274193-13274251, 13274411-13274419, 13274553-13274715, 13275277-13275285)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017258-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:13691587-13691646, 13692199-13692309, 13692634-13692647, 13692910-13692979, 13695406-13695552)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017299-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13855973 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c13858453-13858352, c13858262-13858037, c13857885-13857815, c13857518-13857431, c13857333-13857154, c13856100-13855973, c13855796-13855664, c13855432-13855317, c13855192-13855054, c13854894-13854761, c13854450-13854306, c13854152-13854102, c13852626-13852585, c13851706-13851580, c13851372-13851258, c13851014-13851012)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017309-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13891465 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c13891487-13891465, c13891260-13891019, c13890849-13890326)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017311-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:15016118-15016132, 15017047-15017110, 15019184-15019279, 15019861-15019933, 15020041-15020050, 15020584-15020637, 15021060-15021156, 15021302-15021409, 15021756-15021877, 15022064-15022170, 15022483-15022636, 15023012-15023171, 15023273-15023333, 15023581-15023650, 15024777-15024865, 15025039-15025177, 15025383-15025424, 15025980-15026306)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017411-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c15113947-15113802, c15113669-15113663, c15112696-15112622, c15112542-15112428, c15111778-15111648, c15111039-15110980, c15110641-15110504, c15110347-15110098, c15109296-15105996, c15104780-15104625, c15103804-15103724, c15103650-15103601, c15102722-15102517, c15102399-15102250)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017425-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15373116 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c15373251-15373116, c15373014-15372972, c15372726-15372591, c15372478-15372433, c15372299-15372178, c15372078-15371989, c15371893-15371760, c15371062-15371003, c15370834-15370783, c15370696-15370568)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017465-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15590043 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:15588741-15588860, 15588947-15589006, 15589903-15590043, 15591060-15591092)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017484-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16600698 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:16595863-16596012, 16596184-16596357, 16596484-16596572, 16596675-16596761, 16596920-16596983, 16597088-16597270, 16597519-16597649, 16597854-16597914, 16598298-16598350, 16600545-16600698, 16600823-16600900, 16601061-16601268, 16601727-16601836, 16602026-16602100, 16602546-16602725)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017564-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16693852 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c16705431-16705390, c16704804-16704597, c16702552-16702284, c16701811-16701650, c16701493-16701380, c16701202-16701029, c16700575-16700507, c16700224-16700027, c16699765-16699565, c16699389-16699237, c16698963-16698841, c16698701-16698564, c16698399-16698235, c16698039-16697859, c16697344-16697181, c16697042-16696917, c16696739-16696597, c16696417-16696183, c16695993-16695871, c16695615-16695470, c16695369-16695186, c16694991-16694799, c16694586-16694429, c16694218-16694054, c16693959-16693852, c16693473-16693306, c16693129-16692980, c16692137-16692006, c16691907-16691797, c16691648-16691478, c16690884-16690663, c16689740-16689720, c16687741-16687704, c16687575-16687545)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017579-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16738299 of lcl|scaffold_9 FEATURE: CDS: hypothetical protein [(lcl|scaffold_9:c16739950-16739727, c16739295-16739206, c16738921-16738867, c16738713-16738640, c16738373-16738299, c16738159-16738108, c16737996-16737934)] [lcl|scaffold_9: delta, dna len= 18536572] -> [gnl|ncbi|FUN_017583-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 66928 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:63974-64194, 64288-64461, 64854-64916, 66754-66928, 67096-67232, 67506-67568, 67765-68079)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 634982 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:633360-633366, 634322-634982, 635017-635983)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 635017 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:633360-633366, 634322-634982, 635017-635983)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1665747 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c1665768-1665747, c1665602-1665559, c1665446-1665171)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1665559 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c1665768-1665747, c1665602-1665559, c1665446-1665171)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2638698 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:2590876-2591103, 2591564-2591624, 2591728-2591964, 2592647-2592690, 2598883-2598996, 2609612-2609715, 2614734-2614842, 2618368-2618526, 2622212-2622249, 2629488-2629567, 2629693-2629737, 2630624-2630668, 2632440-2632483, 2632870-2632956, 2636900-2636985, 2638578-2638698, 2639490-2639584, 2639927-2640047, 2641077-2641165, 2641616-2641860)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3274844 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c3282669-3282473, c3281699-3281627, c3281343-3281246, c3280390-3280271, c3279851-3279795, c3279343-3279281, c3279154-3279083, c3278730-3278592, c3278180-3278119, c3277767-3277584, c3277338-3277239, c3275399-3275306, c3274926-3274844, c3272918-3272821, c3272587-3272529, c3272405-3272302, c3271887-3271814, c3271716-3271655, c3269083-3269042)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3735907 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c3738033-3738028, c3737513-3737417, c3737120-3736984, c3736629-3736534, c3736018-3735907, c3735529-3735420, c3734720-3734504, c3734459-3734282, c3733898-3733585, c3733042-3732785, c3732004-3731967)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3735529 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c3738033-3738028, c3737513-3737417, c3737120-3736984, c3736629-3736534, c3736018-3735907, c3735529-3735420, c3734720-3734504, c3734459-3734282, c3733898-3733585, c3733042-3732785, c3732004-3731967)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3795846 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:3792794-3792895, 3793932-3794015, 3794331-3794495, 3794917-3795095, 3795785-3795846, 3796471-3796588, 3796742-3796914, 3797259-3797663, 3797765-3797938, 3798035-3798421, 3801313-3801383)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4206311 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:4198260-4198408, 4198713-4198846, 4198941-4199041, 4199293-4199424, 4199532-4199627, 4199728-4199832, 4200165-4200256, 4203550-4203656, 4203774-4203934, 4206166-4206311, 4206880-4207808)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4206311 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:4198260-4198408, 4198650-4198846, 4198941-4199041, 4199293-4199424, 4199532-4199627, 4199728-4199832, 4200165-4200256, 4203550-4203656, 4203774-4203934, 4204075-4204343, 4206162-4206311, 4206880-4207599)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4847754 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c4848644-4848463, c4848379-4848311, c4848116-4847992, c4847883-4847754, c4847565-4847495, c4847406-4846929)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5029638 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:5027796-5027814, 5028003-5028090, 5028209-5028323, 5028486-5028567, 5028692-5028817, 5029063-5029212, 5029565-5029638, 5029756-5031192)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5040751 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c5041409-5041338, c5041145-5040984, c5040810-5040751, c5040639-5040535, c5040422-5040233, c5039795-5039554, c5039455-5039255, c5039112-5039040, c5038872-5038634, c5038419-5038300)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5227397 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c5229733-5229683, c5229081-5229020, c5228732-5228560, c5227502-5227397, c5227108-5227049, c5226806-5226675, c5226565-5226424, c5226290-5226117, c5226004-5225888, c5225633-5225361, c5225225-5225145, c5224760-5224656, c5224523-5224417, c5224289-5224139, c5224029-5223996, c5223865-5223734, c5223592-5223396, c5223282-5222658)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5227108 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c5229733-5229683, c5229081-5229020, c5228732-5228560, c5227502-5227397, c5227108-5227049, c5226806-5226675, c5226565-5226424, c5226290-5226117, c5226004-5225888, c5225633-5225361, c5225225-5225145, c5224760-5224656, c5224523-5224417, c5224289-5224139, c5224029-5223996, c5223865-5223734, c5223592-5223396, c5223282-5222658)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5253569 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:5245386-5245403, 5246785-5246904, 5247018-5247119, 5250058-5250132, 5250609-5250687, 5250799-5250911, 5251126-5251225, 5251418-5251514, 5251871-5251945, 5252132-5252288, 5252678-5252842, 5252995-5253116, 5253383-5253569, 5253979-5254114, 5254321-5254416, 5254567-5254685, 5254766-5254899, 5254985-5255226, 5255322-5255514, 5255907-5256123, 5256378-5256482, 5256722-5256825, 5259066-5259149, 5259302-5259461, 5259601-5259748, 5260002-5260207, 5260313-5260487, 5260782-5260990, 5261149-5261495, 5261607-5261739, 5261857-5262017, 5262175-5262340, 5262510-5262596, 5262977-5263203, 5263618-5264062, 5264211-5264768, 5264886-5265086, 5265173-5265284, 5265424-5265567, 5265664-5265937, 5266090-5266207, 5266354-5266486, 5266606-5266700, 5266856-5266991, 5267142-5267328, 5267482-5267593,...] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5460126 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c5464560-5464196, c5463556-5463389, c5463160-5463054, c5462782-5462698, c5462141-5462058, c5461923-5461730, c5461572-5461383, c5461278-5461181, c5460999-5460819, c5460597-5460504, c5460255-5460126, c5459532-5459343, c5459251-5459118, c5458684-5456721)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5468452 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:5468279-5468452, 5468593-5468720, 5469196-5469263, 5469423-5469512, 5469607-5469716, 5469825-5469924, 5470040-5472274)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5473471 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:5472511-5472579, 5473134-5473217, 5473311-5473471, 5473746-5473880, 5473968-5474195)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5473746 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:5472511-5472579, 5473134-5473217, 5473311-5473471, 5473746-5473880, 5473968-5474195)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5698828 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c5700084-5698828, c5696192-5695632, c5694286-5694123, c5693357-5693304, c5693179-5693083, c5692402-5692254, c5690669-5690559, c5688317-5688291, c5686955-5685700)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6288566 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c6289302-6289300, c6288886-6288790, c6288615-6288566, c6288482-6288443, c6288340-6288266, c6288119-6288046, c6287933-6287862)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8048696 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c8058841-8058716, c8058043-8057636, c8057487-8056969, c8056143-8055807, c8055473-8055334, c8055190-8054877, c8054639-8054444, c8054280-8054086, c8053235-8053006, c8051623-8051561, c8051173-8051075, c8049365-8049301, c8049093-8048936, c8048860-8048696, c8048602-8048456, c8048341-8048200, c8047271-8047059, c8046938-8046804, c8046635-8046487, c8046037-8045901, c8045814-8045684, c8045549-8045419, c8045285-8045183, c8045014-8044947, c8044231-8044186, c8044074-8044048, c8043749-8043402, c8043257-8043171, c8042857-8042819, c8042702-8042659)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8393913 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:8391977-8392420, 8392529-8392637, 8392795-8393913, 8393936-8394599)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9456728 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c9457114-9456728, c9456439-9456284, c9455260-9455102, c9454890-9454823, c9454655-9454538, c9453996-9453927, c9450957-9450637)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11822521 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c11826317-11826120, c11825698-11824744, c11823533-11823425, c11823266-11823000, c11822799-11822737, c11822578-11822521, c11822335-11822195, c11822101-11821978, c11821783-11821268)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11889098 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:11884729-11884782, 11884883-11885069, 11885180-11885378, 11885703-11885872, 11886008-11886216, 11886390-11886540, 11886750-11886873, 11887712-11887831, 11888099-11888191, 11888334-11888475, 11888992-11889098, 11889192-11889301, 11889806-11890745)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12222945 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c12225073-12224868, c12224203-12223922, c12223769-12223547, c12223442-12223225, c12223051-12222945, c12222792-12222684, c12222569-12222472, c12222033-12221997, c12221562-12221370, c12221273-12221175, c12220889-12219849)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12471056 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:12470208-12470453, 12470561-12470572, 12470872-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476190, 12476333-12477848)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12471056 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:12470672-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12476190, 12476333-12477848)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12471056 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:12470208-12470453, 12470561-12470572, 12470872-12471056, 12473068-12473394, 12474395-12474561, 12474720-12474811, 12475009-12475140, 12475448-12475552, 12475660-12475875, 12476119-12477848)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12565695 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:<12565695-12565740, 12565846-12566157)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13038869 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:13036967-13037123, 13037577-13037924, 13038185-13038306, 13038488-13038613, 13038792-13038869, 13039170-13039265, 13039390-13039467, 13039800-13040038, 13040264-13040309)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13054906 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c13088725-13088564, c13088278-13088095, c13087851-13087736, c13087045-13087008, c13086133-13086062, c13084710-13084587, c13083347-13083228, c13082670-13082581, c13080803-13080721, c13079058-13078986, c13078723-13078595, c13078352-13078218, c13078060-13077859, c13076878-13076793, c13076573-13076490, c13076356-13076204, c13076031-13075777, c13075536-13075414, c13075207-13075125, c13074818-13074696, c13074418-13074339, c13074162-13073975, c13073863-13073798, c13073635-13073543, c13073381-13073258, c13073124-13073003, c13072841-13072758, c13072659-13072567, c13072389-13072271, c13072055-13071986, c13070434-13070321, c13070063-13069992, c13069606-13069457, c13068988-13068905, c13068799-13068703, c13068081-13067696, c13067602-13067548, c13067348-13067227, c13067023-13066909, c...] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13297189 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c13305594-13305211, c13304978-13304826, c13304023-13303861, c13302488-13302264, c13301562-13301405, c13300458-13300345, c13300120-13300029, c13299890-13297189, c13297143-13296195)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13855973 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c13858478-13858352, c13858262-13858037, c13857885-13857815, c13857518-13857431, c13857333-13857154, c13856100-13855973, c13855796-13855664, c13855432-13855317, c13855192-13855054, c13854894-13854761, c13854450-13854306, c13854152-13854102, c13852626-13852585, c13851706-13851580, c13851372-13851258, c13851014-13850452)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13891465 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c13891500-13891465, c13891260-13891019, c13890849-13890134)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15343964 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:15343898-15343964, 15344186-15344328, 15344709-15344765, 15345328-15345408, 15345649-15345725, 15346067-15346128, 15346376-15346516, 15346708-15346765, 15347658-15347733, 15347949-15348089, 15348404-15348501, 15348693-15348765, 15349250-15349433, 15349556-15349644, 15349780-15349896, 15350235-15350336, 15351064-15351258, 15351608-15351755, 15352248-15352334, 15352854-15352961, 15353274-15353410, 15353516-15353626, 15353792-15353850, 15353960-15354053, 15354724-15354824, 15354975-15355080, 15355166-15355289, 15355779-15355840, 15355957-15356074, 15356152-15357992)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15344186 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:15343898-15343964, 15344186-15344328, 15344709-15344765, 15345328-15345408, 15345649-15345725, 15346067-15346128, 15346376-15346516, 15346708-15346765, 15347658-15347733, 15347949-15348089, 15348404-15348501, 15348693-15348765, 15349250-15349433, 15349556-15349644, 15349780-15349896, 15350235-15350336, 15351064-15351258, 15351608-15351755, 15352248-15352334, 15352854-15352961, 15353274-15353410, 15353516-15353626, 15353792-15353850, 15353960-15354053, 15354724-15354824, 15354975-15355080, 15355166-15355289, 15355779-15355840, 15355957-15356074, 15356152-15357992)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15373116 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c15373640-15373521, c15373253-15373116, c15373014-15372972, c15372726-15372591, c15372478-15372433, c15372299-15372178, c15372078-15371989, c15371893-15371760, c15371062-15371003, c15370834-15370783, c15370696-15370202)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15590043 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:15588462-15588573, 15588739-15588860, 15588947-15589006, 15589903-15590043, 15591060-15591307)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16600698 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:16595791-16596012, 16596184-16596357, 16596484-16596572, 16596675-16596761, 16596920-16596983, 16597088-16597270, 16597519-16597649, 16597854-16597914, 16598298-16598350, 16600545-16600698, 16600823-16600900, 16601061-16601268, 16601727-16601836, 16602026-16602100, 16602546-16602725)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16693852 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c16705431-16705390, c16704804-16704597, c16702552-16702284, c16701811-16701650, c16701493-16701380, c16701202-16701029, c16700575-16700507, c16700224-16700027, c16699765-16699565, c16699389-16699237, c16698963-16698841, c16698701-16698564, c16698399-16698235, c16698039-16697859, c16697344-16697181, c16697042-16696917, c16696739-16696597, c16696417-16696183, c16695993-16695871, c16695615-16695470, c16695369-16695186, c16694991-16694799, c16694586-16694429, c16694218-16694054, c16693959-16693852, c16693473-16693306, c16693129-16692980, c16692137-16692006, c16691907-16691797, c16691648-16691478, c16690884-16690663, c16689740-16689720, c16687741-16687704, c16687575-16687500, c16687218-16685436)] [lcl|scaffold_9: delta, dna len= 18536572]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16738299 of lcl|scaffold_9 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_9:c16739950-16739727, c16739295-16739206, c16738921-16738867, c16738713-16738640, c16738373-16738299, c16738159-16738108, c16737996-16737934)] [lcl|scaffold_9: delta, dna len= 18536572]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 382104 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c383034-382851, c382332-382104, c381444-381315, c380844-380619, c380455-380254, c380147-380003, c379841-379689, c379318-379172, c378971-378824, c377254-377067)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024819-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 381444 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c383034-382851, c382332-382104, c381444-381315, c380844-380619, c380455-380254, c380147-380003, c379841-379689, c379318-379172, c378971-378824, c377254-377067)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024819-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:1139645-1139801, 1140670-1140682, 1140970-1141033)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024885-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1312268 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:1311753-1311786, 1311872-1312073, 1312193-1312268, 1312367-1312460, 1312701-1312912)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024892-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c1669269-1669110, c1668198-1668171, c1668087-1668003, c1664608-1664602, c1663751-1663654)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024916-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1962174 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:1954232-1954330, 1954472-1954591, 1956392-1956525, 1958706-1958790, 1959933-1960019, 1961998-1962174, 1963444-1963527, 1966085-1966352, 1966597-1966752, 1968161-1968242, 1968676-1968718, 1968788-1968925, 1970216-1970361, 1970923-1971121, 1972383-1972548, 1972767-1972912, 1973649-1973744)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024941-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:2132192-2132379, 2133395-2133535, 2134066-2134182, 2134309-2134353, 2134671-2134820, 2135273-2135336, 2135460-2135534, 2136001-2136123, 2136337-2136429, 2136569-2136747, 2136912-2136998, 2137340-2137526, 2137896-2137985, 2138570-2138634, 2139062-2139212, 2139730-2139828, 2140100-2140169, 2140500-2140567, 2141538-2141741, 2141974-2142131, 2142224-2142319, 2142423-2142478, 2142589-2142645, 2142768-2142823, 2142965-2143063, 2143241-2143303, 2143394-2143489, 2143764-2143895, 2143974-2144183, 2144387-2144523, 2144598-2144651, 2144994-2145123, 2145274-2145355, 2145446-2145599, 2145799-2145868, 2145978-2146103, 2146374-2146526, 2146659-2146763, 2147918-2148009, 2148333-2148464, 2148897-2148910, 2149100-2149276, 2149364-2149449, 2149745-2149873, 2150370-2150525, 2150818-2150959...] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024954-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2278644 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:2275356-2275383, 2276771-2276838, 2277354-2277447, 2277545-2277671, 2278581-2278644, 2278754-2278871, 2279042-2279144, 2279524-2279623, 2279872-2280060, 2280426-2280500, 2280958-2281016, 2281122-2281309, 2281493-2281650, 2282916-2283161)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_024970-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2602945 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c2609382-2609364, c2607638-2607503, c2607051-2606937, c2606729-2606509, c2606315-2606114, c2605867-2605592, c2605416-2605234, c2604784-2604616, c2604451-2604310, c2604124-2603914, c2603540-2603435, c2603105-2602945, c2602821-2602754, c2602646-2602578, c2602417-2602182, c2601664-2601501, c2601380-2601126, c2600996-2600889)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025007-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2917476 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c2921369-2921335, c2921152-2920957, c2920840-2920745, c2920136-2919996, c2919804-2919662, c2919521-2919422, c2919341-2919180, c2918910-2918758, c2918582-2918352, c2918261-2918187, c2918092-2918000, c2917913-2917793, c2917654-2917476, c2917253-2917127, c2917014-2916869, c2916684-2916511, c2916294-2916136, c2915967-2915796, c2915700-2915335, c2914461-2914403, c2914023-2913898, c2913782-2913663, c2913526-2913455, c2913306-2913127)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025040-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3244203 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:3238110-3238353, 3238663-3238732, 3238920-3239847, 3239991-3240125, 3240356-3240485, 3240771-3240899, 3241451-3241555, 3241970-3242133, 3242394-3242544, 3242829-3243392, 3243595-3243701, 3243806-3243926, 3244103-3244203, 3244522-3244686)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025064-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5449426 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:5449390-5449426, 5449701-5449829, 5449964-5450112, 5450335-5450404, 5450562-5450760, 5450920-5451088, 5451204-5451412, 5451515-5451541, 5452125-5452304, 5452634-5452660, 5452753-5452759)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025324-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6690246 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c6692195-6691775, c6691655-6690246, c6690144-6690011, c6688992-6688874, c6688673-6688530, c6687942-6687797, c6686653-6686499, c6685295-6685154, c6683559-6683390)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025467-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6734476 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c6735680-6735622, c6734602-6734476, c6733592-6733464, c6732220-6732008, c6731373-6731254, c6730323-6730219, c6729746-6729648, c6728639-6728553, c6728463-6728321, c6727309-6727054, c6726712-6726523, c6725604-6725524, c6725001-6724754)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025471-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6889500 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c6890169-6890084, c6889950-6889859, c6889621-6889500, c6889342-6889266, c6888859-6888798, c6888591-6888489, c6887652-6887532, c6887243-6887142, c6886576-6886485, c6886371-6886274, c6885810-6885788)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025488-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7231176 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:7224800-7224813, 7224904-7225000, 7225384-7225481, 7225679-7225772, 7226014-7226094, 7226195-7226242, 7226498-7226581, 7227258-7227433, 7228286-7228367, 7228947-7229008, 7229510-7229621, 7229994-7230027, 7230221-7230338, 7231018-7231176, 7231462-7231589, 7231724-7231779)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025529-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8360519 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:8357797-8357908, 8358025-8358152, 8358307-8358366, 8358506-8358685, 8358987-8359121, 8359290-8359448, 8359553-8359666, 8359791-8359890, 8360067-8360151, 8360300-8360519, 8360612-8360704, 8360795-8360897, 8361013-8361101, 8361446-8361567, 8362278-8362329)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025654-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9190982 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:9189852-9189875, 9190530-9190593, 9190693-9190724, 9190905-9190982, 9191206-9191311, 9191519-9191612, 9191793-9191838)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025723-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c9320938-9320900, c9320733-9320632, c9320523-9320425, c9319330-9319232, c9318137-9318039, c9316466-9316281, c9314310-9314212, c9311838-9311740, c9310891-9310793, c9310673-9310476, c9309587-9309489, c9309020-9308922, c9308117-9308019, c9307687-9307490, c9305833-9305735, c9304870-9304772, c9303126-9302929, c9302817-9302719, c9302629-9302531, c9302386-9302288, c9302086-9301991, c9301794-9301722, c9301552-9301493, c9300011-9299976, c9297633-9297510, c9296022-9296011, c9294803-9294716, c9293843-9293737, c9292393-9292169, c9290553-9290399, c9290267-9290056, c9289907-9289700, c9289519-9289423, c9289315-9289087, c9288931-9288806, c9288620-9288498, c9287369-9287259)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025735-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9510093 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c9514949-9514804, c9514397-9514325, c9510997-9510921, c9510548-9510428, c9510206-9510093, c9508351-9508198, c9505924-9505788, c9505653-9505582)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025752-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c9766091-9765753, c9765419-9765269, c9764765-9764754, c9764275-9764214, c9763837-9762777, c9762568-9762424, c9759214-9759074)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025771-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c9907259-9907248, c9907189-9907175, c9907121-9906603)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025794-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9919059 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c9928068-9928032, c9926863-9926646, c9926269-9926180, c9925942-9925873, c9925776-9925684, c9925503-9925397, c9925304-9925245, c9925080-9924986, c9924743-9924643, c9924490-9924429, c9924339-9924272, c9924135-9924056, c9923964-9923852, c9923669-9923529, c9923407-9923222, c9923126-9922947, c9922829-9922713, c9922614-9922474, c9922384-9922295, c9922200-9922048, c9921890-9921783, c9921401-9921301, c9920590-9920523, c9920346-9920226, c9920142-9920061, c9919357-9919259, c9919134-9919059, c9918973-9918818, c9918713-9918517, c9918420-9918220, c9917879-9917687, c9917568-9917456, c9917345-9917259)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025795-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10344594 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c10344914-10344874, c10344666-10344594, c10343617-10343518, c10342056-10341972, c10341715-10341589, c10340078-10340001, c10338351-10338265, c10335709-10335542, c10332081-10331962, c10326900-10325890)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025827-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10811432 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:10803392-10803544, 10803796-10803886, 10804028-10804091, 10804184-10804329, 10804441-10804538, 10804639-10804851, 10805034-10805207, 10805328-10805429, 10805530-10805667, 10805807-10805945, 10806216-10806373, 10806515-10806640, 10806790-10806900, 10807064-10807169, 10807325-10807434, 10807642-10807734, 10807862-10807976, 10808141-10808262, 10808444-10808592, 10808730-10808961, 10809050-10809184, 10809306-10809506, 10809660-10809855, 10809976-10810067, 10810203-10810343, 10810577-10810660, 10810903-10811088, 10811346-10811432, 10811454-10811556, 10811796-10811951, 10812267-10812435, 10812596-10812645, 10812741-10812893, 10813294-10813514, 10813679-10813819)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025887-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:10963802-10963905, 10964475-10964485, 10964948-10965108, 10965393-10965569, 10965723-10965927, 10966274-10966432, 10966569-10966765)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025891-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11676860 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c11679950-11679294, c11679128-11678932, c11678817-11678507, c11678380-11678316, c11678138-11678071, c11677539-11677415, c11677329-11677257, c11676921-11676860, c11676498-11676497)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_025982-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12328516 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c12332037-12331936, c12331600-12331538, c12331347-12331329, c12331204-12331182, c12331075-12330893, c12330533-12330456, c12330355-12330132, c12330026-12329907, c12329777-12329517, c12329209-12329050, c12328764-12328516, c12328222-12328097, c12327971-12327896, c12327765-12327664, c12327544-12327368, c12327243-12327097, c12326916-12326406, c12326222-12326140, c12325796-12325715, c12325638-12325539, c12325330-12325142)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026065-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12820814 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:12819407-12819420, 12819782-12819996, 12820108-12820229, 12820358-12820450, 12820535-12820665, 12820745-12820814, 12820988-12821103, 12821195-12821384, 12821619-12821774)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026131-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:12935397-12935663, 12935905-12935995, 12936753-12936801, 12937885-12937891, 12938202-12938279, 12938649-12938775, 12939186-12939293, 12941697-12941799, 12942145-12942277, 12942419-12942538, 12942723-12942938, 12944398-12944568, 12944655-12944801, 12945093-12945261, 12945464-12945630, 12945936-12946143, 12946537-12947243, 12947474-12947761)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026140-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13280922 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:13280822-13280922, 13281809-13282242, 13283844-13283903, 13284642-13284955)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026188-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13387454 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c13388771-13388707, c13388416-13388298, c13388133-13387978, c13387875-13387771, c13387666-13387454, c13387314-13387213, c13386770-13386418)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026203-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c13955218-13954963, c13954804-13954729, c13954450-13954243, c13953931-13953896, c13951144-13951133, c13949819-13949705, c13948338-13948299, c13948173-13947436, c13945864-13945747)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026269-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14081934 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c14082750-14082694, c14082439-14082385, c14082282-14082181, c14082087-14081934, c14081842-14081745, c14081619-14081584, c14081496-14081307, c14081135-14080984, c14080890-14080750, c14080661-14080513, c14079841-14079647)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026281-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:14135314-14135373, 14135513-14135578, 14135676-14135860, 14136231-14136336, 14136637-14136859, 14138018-14138185, 14138904-14138915, 14140590-14140682, 14142730-14142875, 14142989-14143141, 14144219-14144317, 14144728-14144790, 14145183-14145249, 14146948-14147013, 14147134-14147254, 14147503-14147598, 14148818-14148881, 14148983-14149024, 14149323-14149456, 14149585-14149687)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026291-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:15103890-15103907, 15105352-15105426, 15107866-15107943, 15108638-15108808, 15109178-15109222, 15111108-15111152, 15111702-15111737, 15112131-15112263, 15115101-15115148, 15116265-15116405, 15118147-15118232, 15118421-15118526, 15118771-15118835, 15119693-15119753, 15119854-15119861, 15121046-15121126, 15121856-15121969)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026411-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:c15180429-15180292, c15180015-15180007, c15179915-15179628, c15179544-15179467, c15178886-15178793, c15178080-15177863)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026423-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15565741 of lcl|scaffold_14 FEATURE: CDS: hypothetical protein [(lcl|scaffold_14:15564560-15565741, 15565796-15566458, 15566495-15567199, 15567361-15567571, 15567895-15567974, 15568278-15568354, 15568516-15568576)] [lcl|scaffold_14: delta, dna len= 16476736] -> [gnl|ncbi|FUN_026473-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 382104 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c383034-382851, c382332-382104, c381444-381315, c380844-380619, c380455-380254, c380147-380003, c379841-379689, c379318-379172, c378971-378824, c377254-377067)] [lcl|scaffold_14: delta, dna len= 16476736]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 381444 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c383034-382851, c382332-382104, c381444-381315, c380844-380619, c380455-380254, c380147-380003, c379841-379689, c379318-379172, c378971-378824, c377254-377067)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1312268 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:1311539-1311786, 1311872-1312073, 1312193-1312268, 1312367-1312460, 1312701-1314461)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1962174 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:1954232-1954330, 1954472-1954591, 1956392-1956525, 1958706-1958790, 1959933-1960019, 1961998-1962174, 1963444-1963527, 1966085-1966352, 1966597-1966752, 1968161-1968242, 1968676-1968718, 1968788-1968925, 1970216-1970361, 1970923-1971121, 1972383-1972548, 1972767-1972912, 1973649-1974587)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2278644 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:2275154-2275383, 2276771-2276838, 2277354-2277447, 2277545-2277671, 2278581-2278644, 2278754-2278871, 2279042-2279144, 2279524-2279623, 2279872-2280060, 2280426-2280500, 2280958-2281016, 2281122-2281309, 2281493-2281650, 2282916-2283322)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2602945 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c2609382-2609364, c2607638-2607503, c2607051-2606937, c2606729-2606509, c2606315-2606114, c2605867-2605592, c2605416-2605234, c2604784-2604616, c2604451-2604310, c2604124-2603914, c2603540-2603435, c2603105-2602945, c2602821-2602754, c2602646-2602578, c2602417-2602182, c2601664-2601501, c2601380-2601126, c2600996-2600259, c2600143-2597671)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2917476 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c2921369-2921335, c2921152-2920957, c2920840-2920745, c2920136-2919996, c2919804-2919662, c2919521-2919422, c2919341-2919180, c2918910-2918758, c2918582-2918352, c2918261-2918187, c2918092-2918000, c2917913-2917793, c2917654-2917476, c2917253-2917127, c2917014-2916869, c2916684-2916511, c2916294-2916136, c2915967-2915796, c2915700-2915335, c2914461-2914403, c2914023-2913898, c2913782-2913663, c2913526-2913455, c2913306-2913127)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3244203 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:3236889-3237032, 3238078-3238353, 3238663-3238732, 3238920-3239847, 3239991-3240125, 3240356-3240485, 3240771-3240899, 3241451-3241555, 3241970-3242133, 3242394-3242544, 3242829-3243392, 3243595-3243701, 3243806-3243926, 3244103-3244203, 3244522-3245148)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5449426 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:5449368-5449426, 5449701-5449829, 5449964-5450112, 5450335-5450404, 5450562-5450760, 5450920-5451088, 5451204-5451412, 5451515-5451541, 5452125-5452304, 5452634-5452660, 5452753-5452991)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6690246 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c6692195-6691775, c6691655-6690246, c6690144-6690011, c6688992-6688874, c6688673-6688530, c6687942-6687797, c6686653-6686499, c6685295-6685154, c6683559-6682685)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6734476 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c6735720-6735622, c6734602-6734476, c6733592-6733464, c6732220-6732008, c6731373-6731254, c6730323-6730219, c6729746-6729648, c6728639-6728553, c6728463-6728321, c6727309-6727054, c6726712-6726523, c6725604-6725524, c6725001-6724728)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6889500 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c6890445-6890084, c6889950-6889859, c6889621-6889500, c6889342-6889266, c6888859-6888798, c6888591-6888489, c6887652-6887532, c6887243-6887142, c6886576-6886485, c6886371-6886274, c6885810-6884873)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7231176 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:7224059-7224178, 7224738-7224813, 7224904-7225000, 7225384-7225481, 7225679-7225772, 7226014-7226094, 7226195-7226242, 7226498-7226581, 7227258-7227433, 7228286-7228367, 7228947-7229008, 7229510-7229621, 7229994-7230027, 7230221-7230338, 7231018-7231176, 7231462-7231589, 7231724-7232298)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8360519 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:8357797-8357908, 8358025-8358152, 8358307-8358366, 8358506-8358685, 8358987-8359121, 8359290-8359448, 8359553-8359666, 8359791-8359890, 8360067-8360151, 8360300-8360519, 8360612-8360704, 8360795-8360897, 8361013-8361101, 8361446-8361567, 8362278-8362329)] [lcl|scaffold_14: delta, dna len= 16476736]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8755449 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c8761004-8760146, c8760008-8759010, c8758688-8758459, c8758365-8758239, c8758153-8757960, c8757019-8756743, c8756640-8755449, c8755232-8754619)] [lcl|scaffold_14: delta, dna len= 16476736]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8755232 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c8761004-8760146, c8760008-8759010, c8758688-8758459, c8758365-8758239, c8758153-8757960, c8757019-8756743, c8756640-8755449, c8755232-8754619)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9190982 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:9189434-9189875, 9190530-9190593, 9190693-9190724, 9190905-9190982, 9191206-9191311, 9191519-9191612, 9191793-9192359)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9510093 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c9514949-9514804, c9514397-9514325, c9510997-9510921, c9510548-9510428, c9510206-9510093, c9508351-9508198, c9505924-9505788, c9505653-9504429)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9919059 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c9928122-9928032, c9926863-9926646, c9926269-9926180, c9925942-9925873, c9925776-9925684, c9925503-9925397, c9925304-9925245, c9925080-9924986, c9924743-9924643, c9924490-9924429, c9924339-9924272, c9924135-9924056, c9923964-9923852, c9923669-9923529, c9923407-9923222, c9923126-9922947, c9922829-9922713, c9922614-9922474, c9922384-9922295, c9922200-9922048, c9921890-9921783, c9921401-9921301, c9920590-9920523, c9920346-9920226, c9920142-9920061, c9919357-9919259, c9919134-9919059, c9918973-9918818, c9918713-9918517, c9918420-9918220, c9917879-9917687, c9917568-9917456, c9917345-9915769)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10344594 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c10344914-10344874, c10344666-10344594, c10343617-10343518, c10342056-10341972, c10341715-10341589, c10340078-10340001, c10338351-10338265, c10335709-10335542, c10332081-10331962, c10326900-10322676)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10811432 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:10803392-10803544, 10803796-10803886, 10804028-10804091, 10804184-10804329, 10804441-10804538, 10804639-10804851, 10805034-10805207, 10805328-10805429, 10805530-10805667, 10805807-10805945, 10806216-10806373, 10806515-10806640, 10806790-10806900, 10807064-10807169, 10807325-10807434, 10807642-10807734, 10807862-10807976, 10808141-10808262, 10808444-10808592, 10808730-10808961, 10809050-10809184, 10809306-10809506, 10809660-10809855, 10809976-10810067, 10810203-10810343, 10810577-10810660, 10810903-10811088, 10811346-10811432, 10811454-10811556, 10811796-10811951, 10812267-10812435, 10812596-10812645, 10812741-10812893, 10813294-10813514, 10813679-10814022)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11676860 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c11680748-11680651, c11680053-11679294, c11679128-11678932, c11678817-11678507, c11678380-11678316, c11678138-11678071, c11677539-11677415, c11677329-11677257, c11676921-11676860, c11676498-11674497)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11689114 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c11689387-11689114, c11688627-11688457, c11688278-11688176, c11687999-11687839, c11687720-11687595, c11687518-11687393, c11687284-11687214, c11686950-11686881, c11686730-11686572, c11686492-11686304, c11686199-11686104, c11686005-11685819, c11685700-11685675, c11685484-11684830)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12328516 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c12332147-12331936, c12331600-12331538, c12331347-12331329, c12331204-12331182, c12331075-12330893, c12330533-12330456, c12330355-12330132, c12330026-12329907, c12329777-12329517, c12329209-12329050, c12328764-12328516, c12328222-12328097, c12327971-12327896, c12327765-12327664, c12327544-12327368, c12327243-12327097, c12326916-12326406, c12326222-12326140, c12325796-12325715, c12325638-12325539, c12325330-12323951)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12820814 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:12819407-12819420, 12819782-12819996, 12820108-12820229, 12820358-12820450, 12820535-12820665, 12820745-12820814, 12820988-12821103, 12821195-12821384, 12821619-12821774)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13280922 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:13280611-13280922, 13281809-13282242, 13283844-13283903, 13284642-13284955)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13387454 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c13388863-13388707, c13388416-13388298, c13388133-13387978, c13387875-13387771, c13387666-13387454, c13387314-13387213, c13386770-13386377)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14081934 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:c14082875-14082694, c14082439-14082385, c14082282-14082181, c14082087-14081934, c14081842-14081745, c14081619-14081584, c14081496-14081307, c14081135-14080984, c14080890-14080750, c14080661-14080513, c14079841-14079179)] [lcl|scaffold_14: delta, dna len= 16476736]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15565741 of lcl|scaffold_14 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_14:15564535-15565741, 15565796-15566458, 15566495-15567199, 15567361-15567571, 15567895-15567974, 15568278-15568354, 15568516-15568737)] [lcl|scaffold_14: delta, dna len= 16476736]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:285363-285396, 285729-286004, 286600-286610, 287594-287870, 289324-289349, 289898-290003, 290096-290229)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032471-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 590841 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:586800-586898, 587315-587503, 590475-590537, 590811-590841, 591017-591096, 591389-591567, 594394-594476, 594853-594937, 595092-595167, 595691-595814, 596389-596497, 598235-598404, 598953-599044)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032486-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 727795 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:724362-724364, 724485-724558, 724689-724783, 725523-725683, 725801-725900, 726158-726336, 726541-726655, 726809-726912, 727000-727216, 727599-727795, 728199-728322, 728428-728576, 728787-728933, 729019-729173, 729467-729654, 729908-730074)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032503-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 728933 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:724362-724364, 724485-724558, 724689-724783, 725523-725683, 725801-725900, 726158-726336, 726541-726655, 726809-726912, 727000-727216, 727599-727795, 728199-728322, 728428-728576, 728787-728933, 729019-729173, 729467-729654, 729908-730074)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032503-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 987527 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:974140-974310, 974705-974896, 974983-975113, 975460-975547, 977925-978780, 979188-979457, 981273-981333, 981727-981835, 982932-983033, 984008-984230, 985428-985520, 985681-985742, 985848-985913, 987462-987527, 987865-987909, 988604-988636, 991732-991797, 994520-994774, 994920-995143, 995489-995563, 995932-996166, 996330-996392, 996722-996866, 998182-998966, 999182-999446, 999762-999917, 1000208-1000338, 1001072-1001307, 1002157-1002292, 1002640-1002786, 1002983-1003347, 1003646-1003789, 1004008-1004164)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032528-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c2075790-2075778, c2075631-2075617, c2075232-2075057, c2074743-2074621, c2074229-2074218)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032614-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:2570335-2570431, 2571390-2571397, 2572655-2572849)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032655-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c4074455-4074428, c4073933-4073887, c4073063-4072928, c4072413-4072333, c4072007-4072000, c4071881-4071819)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032772-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:4579814-4579901, 4580531-4580541, 4581167-4581319)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032813-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:4783691-4783727, 4783825-4783900, 4784054-4784150, 4784672-4784791, 4785794-4785808, 4787357-4787448, 4787508-4787602, 4788248-4788339)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032824-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:5384087-5384190, 5384363-5384441, 5384573-5384732, 5384913-5384924, 5385020-5385102, 5385472-5385594, 5385724-5385795, 5386121-5386216, 5386373-5386451, 5387003-5387037, 5387226-5387252, 5387495-5387580, 5387717-5387828, 5387911-5387985, 5388200-5388242, 5388391-5388493, 5388588-5388657, 5388790-5388870, 5388961-5389019, 5389235-5389319)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_032900-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:6475787-6475798, 6476057-6476140, 6477853-6477862, 6478003-6478133, 6478281-6478482, 6479208-6479296, 6480256-6480350, 6480454-6480549, 6481179-6481301, 6481413-6481551, 6481710-6481769, 6482163-6482309, 6482429-6482515, 6482670-6482748, 6482857-6483002, 6483128-6483337, 6483488-6483581, 6483749-6483841, 6485627-6485726, 6485979-6486033, 6486162-6486284)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033001-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6746112 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:6745923-6746112, 6746194-6746285, 6746361-6747125)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033023-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7255198 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c7259345-7259336, c7259147-7259125, c7257890-7257816, c7257426-7257280, c7255296-7255198, c7255078-7255005, c7254872-7254820, c7254606-7254521, c7254333-7254103, c7253919-7253791)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033049-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7674207 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c7675052-7675023, c7674654-7674540, c7674402-7674207, c7673986-7673800, c7673114-7672953, c7672870-7672774, c7672669-7672501, c7672404-7672272, c7671994-7671810, c7671401-7671386)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033101-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8149458 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8148346-8149458, 8149707-8149864, 8150090-8150197, 8150544-8150729, 8150851-8150997, 8151125-8151236)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_046266-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c8159443-8159381, c8158625-8158521, c8158319-8158307, c8156515-8156458, c8156045-8155334)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033151-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8180758-8180859, 8182278-8182286, 8182967-8183138, 8183364-8183488, 8183575-8183672, 8183952-8184115, 8185690-8185854, 8186079-8186223, 8186369-8186562, 8186663-8186973, 8187675-8187806, 8188018-8188176, 8188604-8188716, 8188850-8188928, 8189168-8189266, 8190434-8190559)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033154-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8201795 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8201107-8201142, 8201308-8201397, 8201541-8201614, 8201730-8201795, 8201889-8201930, 8202047-8202101, 8202234-8202337, 8202910-8202985, 8203259-8203400, 8203518-8203618, 8203783-8203856, 8204140-8204265, 8204437-8204560, 8204666-8204755)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033157-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8201889 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8201107-8201142, 8201308-8201397, 8201541-8201614, 8201730-8201795, 8201889-8201930, 8202047-8202101, 8202234-8202337, 8202910-8202985, 8203259-8203400, 8203518-8203618, 8203783-8203856, 8204140-8204265, 8204437-8204560, 8204666-8204755)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033157-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8203400 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8201107-8201142, 8201308-8201397, 8201541-8201614, 8201730-8201795, 8201889-8201930, 8202047-8202101, 8202234-8202337, 8202910-8202985, 8203259-8203400, 8203518-8203618, 8203783-8203856, 8204140-8204265, 8204437-8204560, 8204666-8204755)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033157-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8259226 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8256357-8256407, 8256821-8256838, 8257850-8257885, 8257990-8258057, 8258134-8258176, 8258394-8258474, 8258672-8258750, 8258873-8258969, 8259142-8259226, 8259400-8259520, 8259655-8259798, 8259932-8260018, 8260321-8260407, 8261413-8261420)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033170-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8333879 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c8334925-8334853, c8334573-8334482, c8334366-8334259, c8334148-8334072, c8333960-8333879, c8333791-8333661, c8333444-8333259, c8333172-8333038, c8332866-8332752, c8332675-8332530, c8332392-8332264, c8332162-8332033, c8331873-8331713, c8331500-8331346, c8331243-8331068, c8330951-8330817, c8330676-8330604, c8330497-8330406)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033178-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c8372579-8372464, c8372351-8372289, c8371920-8371907, c8371760-8371572, c8371436-8371257, c8369017-8368910, c8368701-8368610, c8368392-8368162, c8366917-8366803, c8365655-8365495, c8365380-8365233, c8365079-8364943, c8364804-8364632, c8364415-8363130, c8363029-8362773)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033183-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8746141 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8740869-8740970, 8741082-8741234, 8741313-8741428, 8741585-8741686, 8741828-8741888, 8742026-8742169, 8742257-8742458, 8742531-8743583, 8743697-8743992, 8744332-8744451, 8745189-8745402, 8745703-8745847, 8745941-8746141, 8746378-8746397, 8747160-8747281)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033216-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8746378 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8740869-8740970, 8741082-8741234, 8741313-8741428, 8741585-8741686, 8741828-8741888, 8742026-8742169, 8742257-8742458, 8742531-8743583, 8743697-8743992, 8744332-8744451, 8745189-8745402, 8745703-8745847, 8745941-8746141, 8746378-8746397, 8747160-8747281)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033216-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8752831 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8752814-8752831, 8752918-8753083, 8753215-8753360, 8753726-8753870, 8754301-8755341, 8755470-8755627, 8755744-8755861, 8756123-8756508)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033218-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8850432 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:8850258-8850432, 8850570-8850738, 8850876-8851006, 8851820-8851902, 8852106-8852202, 8852362-8852441)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033230-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8882158 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c8883440-8883299, c8882800-8882685, c8882261-8882158, c8881729-8881660, c8881570-8881497, c8881335-8881173, c8880963-8880874, c8880792-8880710, c8880556-8880489, c8880367-8880249, c8880091-8879899, c8879786-8879682, c8879561-8879451, c8879090-8879005, c8878766-8878659, c8878507-8878394, c8878268-8878163, c8878072-8877900, c8877805-8877653, c8877444-8877349)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033235-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8881729 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c8883440-8883299, c8882800-8882685, c8882261-8882158, c8881729-8881660, c8881570-8881497, c8881335-8881173, c8880963-8880874, c8880792-8880710, c8880556-8880489, c8880367-8880249, c8880091-8879899, c8879786-8879682, c8879561-8879451, c8879090-8879005, c8878766-8878659, c8878507-8878394, c8878268-8878163, c8878072-8877900, c8877805-8877653, c8877444-8877349)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033235-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10782402 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:10773308-10774099, 10774781-10774849, 10775250-10775370, 10775416-10775600, 10778818-10778950, 10779168-10779335, 10780002-10780285, 10781410-10781593, 10781805-10781980, 10782227-10782402, 10782531-10783203)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033428-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c10829704-10829436, c10826988-10826931, c10826067-10825896, c10825572-10825462, c10825271-10825122, c10824793-10824606, c10824513-10824411, c10824310-10824206, c10824022-10824010, c10823058-10823025, c10822792-10822754)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033433-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c10861042-10860885, c10860424-10860368, c10860210-10860082, c10859897-10859777, c10858608-10858444, c10858074-10857877, c10857211-10856954, c10856508-10856497, c10855192-10855028)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033438-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:11042920-11042931, 11043255-11043268, 11043601-11043847)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033458-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11183926 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:11181155-11181775, 11181940-11182043, 11182500-11182608, 11182779-11182902, 11183447-11183586, 11183754-11183926, 11184037-11184200, 11184407-11184634, 11184733-11184817, 11184901-11185021, 11185131-11185241)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033477-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c>11336537-11336407, c11334795-11334648, c11334471-11334237, c11333980-11333589)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033504-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11336537 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c>11336537-11336407, c11334795-11334648, c11334471-11334237, c11333980-11333589)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033504-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11564710 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c11571531-11571454, c11569846-11569766, c11569235-11569043, c11568949-11568847, c11568742-11568646, c11568517-11568413, c11568138-11568016, c11567742-11567622, c11567523-11567436, c11567336-11567230, c11567032-11566908, c11566728-11566639, c11566533-11566360, c11566226-11566008, c11565606-11565523, c11565401-11565269, c11565021-11564900, c11564806-11564710, c11564566-11564394, c11564253-11564142, c11564011-11563956, c11563831-11563709, c11563476-11563257, c11563156-11562928, c11562814-11562673, c11562550-11562464)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033531-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11564566 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c11571531-11571454, c11569846-11569766, c11569235-11569043, c11568949-11568847, c11568742-11568646, c11568517-11568413, c11568138-11568016, c11567742-11567622, c11567523-11567436, c11567336-11567230, c11567032-11566908, c11566728-11566639, c11566533-11566360, c11566226-11566008, c11565606-11565523, c11565401-11565269, c11565021-11564900, c11564806-11564710, c11564566-11564394, c11564253-11564142, c11564011-11563956, c11563831-11563709, c11563476-11563257, c11563156-11562928, c11562814-11562673, c11562550-11562464)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033531-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11582217 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c11585632-11584712, c11584406-11584250, c11584119-11583983, c11583877-11583726, c11583363-11583260, c11582300-11582217, c11582062-11581761)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033534-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12088543 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c12089019-12088908, c12088736-12088543, c12088445-12088362, c12088233-12088123, c12087980-12087850, c12087680-12087574, c12087465-12087368, c12087004-12086909, c12086626-12086440, c12086355-12086263, c12085896-12085844)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033599-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12380128 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:12378002-12378289, 12379499-12380128, 12380981-12381158, 12381640-12381832, 12381962-12382103, 12382295-12382498)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033642-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12477306 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c12479744-12479684, c12477453-12477306, c12476022-12475021, c12474921-12474482, c12474405-12474262, c12474079-12473897, c12471089-12470935, c12470771-12470683, c12470496-12470309, c12469810-12469624, c12469480-12469407, c12469205-12469047, c12468825-12468636, c12467665-12467436, c12467301-12467182, c12466959-12466855, c12466430-12466224, c12466052-12465929, c12465666-12465494, c12465231-12465119, c12464946-12464778, c12464207-12464108, c12463852-12463652, c12463128-12463071, c12462926-12462849, c12462677-12462505, c12462227-12462201, c12461903-12461751, c12461528-12461486, c12461357-12461292, c12461187-12459190, c12459012-12458309, c12458116-12457884, c12457632-12457465, c12455780-12455658, c12455171-12455007, c12454778-12454276, c12453807-12453662, c12452982-12452743, ...] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033647-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12521656 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c12531275-12531206, c12531044-12530842, c12530497-12530423, c12530033-12529938, c12529764-12529657, c12529557-12529486, c12529270-12529141, c12528737-12528634, c12528309-12528220, c12528124-12528083, c12527783-12527613, c12527525-12527444, c12527356-12526895, c12526705-12526497, c12526317-12526207, c12525749-12525527, c12524073-12523895, c12523783-12523477, c12522847-12522738, c12522252-12522155, c12521837-12521656, c12518771-12518687, c12517633-12517551, c12516701-12516475, c12516294-12516157)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033655-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12755292 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c12756049-12755937, c12755688-12755493, c12755375-12755292, c12755002-12754848, c12754614-12754287, c12754125-12753938, c12753213-12753093, c12752689-12752450)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033686-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13232324 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c13233003-13232828, c13232474-13232324, c13232217-13232098, c13231937-13231836, c13231630-13231523, c13231328-13231149, c13229954-13229785, c13229216-13229093, c13228306-13228219, c13227772-13227660, c13226885-13226757, c13226153-13225973, c13225742-13225597, c13225511-13225446, c13225260-13225114, c13224869-13224756, c13224483-13224328, c13224243-13224073, c13223339-13223157, c13222595-13222461, c13221948-13221799, c13220753-13220592, c13219947-13219846, c13219733-13219560, c13219217-13219062, c13218882-13218712, c13218535-13218356, c13217933-13217811, c13217561-13217391, c13216797-13216675, c13216536-13216402, c13216327-13216175, c13215098-13214928, c13213721-13213599, c13213484-13213312, c13213157-13213022, c13212329-13212154, c13211933-13211786, c13211703-13211566, ...] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033743-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13193951 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c13233003-13232828, c13232474-13232324, c13232217-13232098, c13231937-13231836, c13231630-13231523, c13231328-13231149, c13229954-13229785, c13229216-13229093, c13228306-13228219, c13227772-13227660, c13226885-13226757, c13226153-13225973, c13225742-13225597, c13225511-13225446, c13225260-13225114, c13224869-13224756, c13224483-13224328, c13224243-13224073, c13223339-13223157, c13222595-13222461, c13221948-13221799, c13220753-13220592, c13219947-13219846, c13219733-13219560, c13219217-13219062, c13218882-13218712, c13218535-13218356, c13217933-13217811, c13217561-13217391, c13216797-13216675, c13216536-13216402, c13216327-13216175, c13215098-13214928, c13213721-13213599, c13213484-13213312, c13213157-13213022, c13212329-13212154, c13211933-13211786, c13211703-13211566, ...] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033743-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13329858 of lcl|scaffold_19 FEATURE: CDS: hypothetical protein [(lcl|scaffold_19:c13336794-13336747, c13335689-13335589, c13335409-13335283, c13335093-13334901, c13334673-13334502, c13333850-13333617, c13332972-13332888, c13332765-13332706, c13330750-13330640, c13330354-13330218, c13330065-13329858, c13329724-13329612, c13329380-13329266, c13329029-13328883, c13328714-13328538, c13328420-13328202, c13327888-13327664, c13327432-13327214, c13326930-13326706, c13325580-13325324, c13325223-13325172, c13325000-13324791, c13324655-13324583, c13324506-13324427, c13324288-13324187, c13324059-13323904, c13323751-13323554, c13323375-13323202, c13322842-13322682, c13322614-13322176)] [lcl|scaffold_19: delta, dna len= 13762102] -> [gnl|ncbi|FUN_033758-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 590841 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:586791-586898, 587315-587503, 590475-590537, 590811-590841, 591017-591096, 591389-591567, 594394-594476, 594853-594937, 595092-595167, 595691-595814, 596389-596497, 598235-598404, 598953-599347)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 727795 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:724161-724364, 724485-724558, 724689-724783, 725523-725683, 725801-725900, 726158-726336, 726541-726655, 726809-726912, 727000-727216, 727599-727795, 728199-728322, 728428-728576, 728787-728933, 729019-729173, 729467-729654, 729908-730222)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 728933 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:724161-724364, 724485-724558, 724689-724783, 725523-725683, 725801-725900, 726158-726336, 726541-726655, 726809-726912, 727000-727216, 727599-727795, 728199-728322, 728428-728576, 728787-728933, 729019-729173, 729467-729654, 729908-730222)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 825715 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c828368-828189, c828032-827942, c827724-827635, c827534-827264, c827110-826946, c826685-826584, c826249-825715, c825494-825283)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 825715 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c827811-827635, c827534-827264, c827110-826946, c826685-826584, c826249-825715, c825494-825283)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 987527 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:974140-974310, 974705-974896, 974983-975113, 975460-975547, 977925-978780, 979188-979457, 981273-981333, 981727-981835, 982932-983033, 984008-984230, 985428-985520, 985681-985742, 985848-985913, 987462-987527, 987865-987909, 988604-988636, 991732-991797, 994520-994774, 994920-995143, 995489-995563, 995932-996166, 996330-996392, 996722-996866, 998182-998966, 999182-999446, 999762-999917, 1000208-1000338, 1001072-1001307, 1002157-1002292, 1002640-1002786, 1002983-1003347, 1003646-1003789, 1004008-1005420)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3309593 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c3314644-3314387, c3313523-3313364, c3311764-3311574, c3311125-3311029, c3310886-3310750, c3310308-3309593, c3309536-3308557)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6746112 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:6745723-6745794, 6745903-6746112, 6746194-6746285, 6746361-6747125)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7255198 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c7259345-7259336, c7259147-7259125, c7257890-7257816, c7257426-7257280, c7255296-7255198, c7255078-7255005, c7254872-7254820, c7254606-7254521, c7254333-7254103, c7253919-7253791)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7674207 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c7675173-7675023, c7674654-7674540, c7674402-7674207, c7673986-7673800, c7673114-7672953, c7672870-7672774, c7672669-7672501, c7672404-7672272, c7671994-7671810, c7671401-7671323, c7669633-7669150)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8149458 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8148235-8149458, 8149707-8149864, 8150090-8150197, 8150544-8150729, 8150851-8150997, 8151125-8151841)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8201795 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8200646-8200854, 8201090-8201142, 8201308-8201397, 8201541-8201614, 8201730-8201795, 8201889-8201930, 8202047-8202101, 8202234-8202337, 8202910-8202985, 8203259-8203400, 8203518-8203618, 8203783-8203856, 8204140-8204265, 8204437-8204560, 8204666-8204797)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8201889 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8200646-8200854, 8201090-8201142, 8201308-8201397, 8201541-8201614, 8201730-8201795, 8201889-8201930, 8202047-8202101, 8202234-8202337, 8202910-8202985, 8203259-8203400, 8203518-8203618, 8203783-8203856, 8204140-8204265, 8204437-8204560, 8204666-8204797)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8203400 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8200646-8200854, 8201090-8201142, 8201308-8201397, 8201541-8201614, 8201730-8201795, 8201889-8201930, 8202047-8202101, 8202234-8202337, 8202910-8202985, 8203259-8203400, 8203518-8203618, 8203783-8203856, 8204140-8204265, 8204437-8204560, 8204666-8204797)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8259226 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8256357-8256407, 8256821-8256838, 8257850-8257885, 8257990-8258057, 8258134-8258176, 8258394-8258474, 8258672-8258750, 8258873-8258969, 8259142-8259226, 8259400-8259520, 8259655-8259798, 8259932-8260018, 8260321-8260407, 8261413-8263183)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8333879 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c8335531-8335445, c8334929-8334853, c8334573-8334482, c8334366-8334259, c8334148-8334072, c8333960-8333879, c8333791-8333661, c8333444-8333259, c8333172-8333038, c8332866-8332752, c8332675-8332530, c8332392-8332264, c8332162-8332033, c8331873-8331713, c8331500-8331346, c8331243-8331068, c8330951-8330817, c8330676-8330604, c8330497-8330215)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8746141 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8740869-8740970, 8741082-8741234, 8741313-8741428, 8741585-8741686, 8741828-8741888, 8742026-8742169, 8742257-8742458, 8742531-8743583, 8743697-8743992, 8744332-8744451, 8745189-8745402, 8745703-8745847, 8745941-8746141, 8746378-8746397, 8747160-8747332)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8746378 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8740869-8740970, 8741082-8741234, 8741313-8741428, 8741585-8741686, 8741828-8741888, 8742026-8742169, 8742257-8742458, 8742531-8743583, 8743697-8743992, 8744332-8744451, 8745189-8745402, 8745703-8745847, 8745941-8746141, 8746378-8746397, 8747160-8747332)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8752831 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8752698-8752831, 8752918-8753083, 8753215-8753360, 8753726-8753870, 8754301-8755341, 8755470-8755627, 8755744-8755861, 8756123-8756985)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8850432 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:8850258-8850432, 8850570-8850738, 8850876-8851006, 8851820-8851902, 8852106-8852202, 8852362-8852441)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8882158 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c8884054-8883299, c8882800-8882685, c8882261-8882158, c8881729-8881660, c8881570-8881497, c8881335-8881173, c8880963-8880874, c8880792-8880710, c8880556-8880489, c8880367-8880249, c8880091-8879899, c8879786-8879682, c8879561-8879451, c8879090-8879005, c8878766-8878659, c8878507-8878394, c8878268-8878163, c8878072-8877900, c8877805-8877653, c8877444-8877005)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8881729 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c8884054-8883299, c8882800-8882685, c8882261-8882158, c8881729-8881660, c8881570-8881497, c8881335-8881173, c8880963-8880874, c8880792-8880710, c8880556-8880489, c8880367-8880249, c8880091-8879899, c8879786-8879682, c8879561-8879451, c8879090-8879005, c8878766-8878659, c8878507-8878394, c8878268-8878163, c8878072-8877900, c8877805-8877653, c8877444-8877005)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10302385 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:10302348-10302385, 10302539-10303764, 10304271-10307358)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10782402 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:10773308-10774099, 10774781-10774849, 10775250-10775370, 10775416-10775600, 10778818-10778950, 10779168-10779335, 10780002-10780285, 10781410-10781593, 10781805-10781980, 10782227-10782402, 10782531-10784662)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11183926 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:11180581-11180676, 11181091-11181775, 11181940-11182043, 11182500-11182608, 11182779-11182902, 11183447-11183586, 11183754-11183926, 11184037-11184200, 11184407-11184634, 11184733-11184817, 11184901-11185021, 11185131-11185820)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c>11336538-11336407, c11334795-11334648, c11334471-11334237, c11333980-11333425)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11336538 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c>11336538-11336407, c11334795-11334648, c11334471-11334237, c11333980-11333425)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11564710 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c11571603-11571454, c11569846-11569766, c11569235-11569043, c11568949-11568847, c11568742-11568646, c11568517-11568413, c11568138-11568016, c11567742-11567622, c11567523-11567436, c11567336-11567230, c11567032-11566908, c11566728-11566639, c11566533-11566360, c11566226-11566008, c11565606-11565523, c11565401-11565269, c11565021-11564900, c11564806-11564710, c11564566-11564394, c11564253-11564142, c11564011-11563956, c11563831-11563709, c11563476-11563257, c11563156-11562928, c11562814-11562673, c11562550-11561419)] [lcl|scaffold_19: delta, dna len= 13762102]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11564566 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c11571603-11571454, c11569846-11569766, c11569235-11569043, c11568949-11568847, c11568742-11568646, c11568517-11568413, c11568138-11568016, c11567742-11567622, c11567523-11567436, c11567336-11567230, c11567032-11566908, c11566728-11566639, c11566533-11566360, c11566226-11566008, c11565606-11565523, c11565401-11565269, c11565021-11564900, c11564806-11564710, c11564566-11564394, c11564253-11564142, c11564011-11563956, c11563831-11563709, c11563476-11563257, c11563156-11562928, c11562814-11562673, c11562550-11561419)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11582217 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c11585719-11584712, c11584406-11584250, c11584119-11583983, c11583877-11583726, c11583363-11583260, c11582300-11582217, c11582062-11581587)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11582217 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c11585719-11584712, c11584406-11584250, c11584119-11583983, c11583877-11583781, c11583363-11583260, c11582300-11582217, c11582062-11581587)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12088543 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c12089268-12088908, c12088736-12088543, c12088445-12088362, c12088233-12088123, c12087980-12087850, c12087680-12087574, c12087465-12087368, c12087004-12086909, c12086626-12086440, c12086355-12086263, c12085896-12085481)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12380128 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:12377570-12378289, 12379499-12380128, 12380981-12381158, 12381640-12381832, 12381962-12382103, 12382295-12384205)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12477306 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c12481292-12481263, c12479788-12479684, c12477453-12477306, c12476022-12475021, c12474921-12474482, c12474405-12474262, c12474079-12473897, c12471089-12470935, c12470771-12470683, c12470496-12470309, c12469810-12469624, c12469480-12469407, c12469205-12469047, c12468825-12468636, c12467665-12467436, c12467301-12467182, c12466959-12466855, c12466430-12466224, c12466052-12465929, c12465666-12465494, c12465231-12465119, c12464946-12464778, c12464207-12464108, c12463852-12463652, c12463128-12463071, c12462926-12462849, c12462677-12462505, c12462227-12462201, c12461903-12461751, c12461528-12461486, c12461357-12461292, c12461187-12459190, c12459012-12458309, c12458116-12457884, c12457632-12457465, c12455780-12455658, c12455171-12455007, c12454778-12454276, c12453807-12453662, ...] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12521656 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c12531275-12531206, c12531044-12530842, c12530497-12530423, c12530033-12529938, c12529764-12529657, c12529557-12529486, c12529270-12529141, c12528737-12528634, c12528309-12528220, c12528124-12528083, c12527783-12527613, c12527525-12527444, c12527356-12526895, c12526705-12526497, c12526317-12526207, c12525749-12525527, c12524073-12523895, c12523783-12523477, c12522847-12522738, c12522252-12522155, c12521837-12521656, c12518771-12518687, c12517633-12517551, c12516701-12516475, c12516294-12514942)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12755292 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c12757351-12757131, c12756132-12755937, c12755688-12755493, c12755375-12755292, c12755002-12754848, c12754614-12754287, c12754125-12753938, c12753213-12753093, c12752689-12751123)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13232324 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c13233004-13232828, c13232474-13232324, c13232217-13232098, c13231937-13231836, c13231630-13231523, c13231328-13231149, c13229954-13229785, c13229216-13229093, c13228306-13228219, c13227772-13227660, c13226885-13226757, c13226153-13225973, c13225742-13225597, c13225511-13225446, c13225260-13225114, c13224869-13224756, c13224483-13224328, c13224243-13224073, c13223339-13223157, c13222595-13222461, c13221948-13221799, c13220753-13220592, c13219947-13219846, c13219733-13219560, c13219217-13219062, c13218882-13218712, c13218535-13218356, c13217933-13217811, c13217561-13217391, c13216797-13216675, c13216536-13216402, c13216327-13216175, c13215098-13214928, c13213721-13213599, c13213484-13213312, c13213157-13213022, c13212329-13212154, c13211933-13211786, c13211703-13211566, ...] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13193951 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c13233004-13232828, c13232474-13232324, c13232217-13232098, c13231937-13231836, c13231630-13231523, c13231328-13231149, c13229954-13229785, c13229216-13229093, c13228306-13228219, c13227772-13227660, c13226885-13226757, c13226153-13225973, c13225742-13225597, c13225511-13225446, c13225260-13225114, c13224869-13224756, c13224483-13224328, c13224243-13224073, c13223339-13223157, c13222595-13222461, c13221948-13221799, c13220753-13220592, c13219947-13219846, c13219733-13219560, c13219217-13219062, c13218882-13218712, c13218535-13218356, c13217933-13217811, c13217561-13217391, c13216797-13216675, c13216536-13216402, c13216327-13216175, c13215098-13214928, c13213721-13213599, c13213484-13213312, c13213157-13213022, c13212329-13212154, c13211933-13211786, c13211703-13211566, ...] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13329858 of lcl|scaffold_19 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_19:c13336794-13336747, c13335689-13335589, c13335409-13335283, c13335093-13334901, c13334673-13334502, c13333850-13333617, c13332972-13332888, c13332765-13332706, c13330750-13330640, c13330354-13330218, c13330065-13329858, c13329724-13329612, c13329380-13329266, c13329029-13328883, c13328714-13328538, c13328420-13328202, c13327888-13327664, c13327432-13327214, c13326930-13326706, c13325580-13325324, c13325223-13325172, c13325000-13324791, c13324655-13324583, c13324506-13324427, c13324288-13324187, c13324059-13323904, c13323751-13323554, c13323375-13323202, c13322842-13322682, c13322614-13322176)] [lcl|scaffold_19: delta, dna len= 13762102]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 818729 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:814123-814128, 815392-816051, 818681-818729, 818757-819172)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_038939-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c1234804-1234728, c1234110-1233929, c1231836-1231784, c1231007-1231000, c1230912-1230819, c1230384-1230079, c1229851-1229698, c1229597-1229548, c1229450-1229390, c1229197-1229063, c1228861-1228820, c1228708-1228622, c1228528-1228427, c1228329-1227701, c1227498-1227447, c1227082-1226919)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_038974-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1416183 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c1417846-1417762, c1416312-1416183, c1415155-1415008, c1414233-1414195)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_038992-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:2243724-2243856, 2244594-2244603, 2244878-2245080, 2245749-2245903, 2246302-2246473, 2247471-2247877)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039065-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c2385881-2385774, c2384835-2384729, c2384631-2384478, c2384042-2383698, c2383081-2382929, c2382616-2382494, c2382103-2382014, c2381901-<2381819)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039078-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2381819 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c2385881-2385774, c2384835-2384729, c2384631-2384478, c2384042-2383698, c2383081-2382929, c2382616-2382494, c2382103-2382014, c2381901-<2381819)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039078-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2396811 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c2397121-2397024, c2396873-2396811, c2396670-2396638, c2396489-2396465, c2395667-2395535, c2395316-2395157, c2394992-2394899, c2394532-2394441, c2394308-2394254, c2393901-2393774, c2392884-2392803, c2391958-2391810, c2391240-2391078, c2390491-2390411, c2390136-2389991, c2389650-2389554, c2388630-2388492, c2388079-2387947, c2387298-2387196)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039079-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:2920019-2920150, 2920287-2920475, 2920725-2920890, 2921819-2921961, 2922569-2922765, 2922968-2923115, 2923239-2923446, 2923547-2923619, 2923824->2924153)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039126-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2924153 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:2920019-2920150, 2920287-2920475, 2920725-2920890, 2921819-2921961, 2922569-2922765, 2922968-2923115, 2923239-2923446, 2923547-2923619, 2923824->2924153)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039126-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2964511 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c2965067-2964902, c2964609-2964511, c2963133-2962922, c2960433-2959852)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039132-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:3078489-3078547, 3079115-3079187, 3079410-3079480, 3079618-3079692, 3079803-3079881, 3080262-3080360, 3080698-3081229, 3081419-3081599, 3082053-3082183, 3082327-3082430, 3082524-3082601, 3082852-3082934, 3083246-3083297, 3085353-3085364, 3085622-3085696, 3086754-3086887, 3087245-3087378, 3087550-3087620, 3088151-3088423)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039145-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3347316 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c3347588-3347516, c3347396-3347316, c3347224-3347079)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039159-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3655844 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:3655129-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656073-3656195)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039186-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3656073 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:3655129-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656073-3656195)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039186-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3655844 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:3655129-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656570-3656644)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039186-T4]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3656570 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:3655129-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656570-3656644)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039186-T4]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3745738 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c3784017-3784008, c3783719-3783652, c3783006-3782863, c3782733-3782611, c3781579-3781544, c3781247-3781182, c3779394-3779329, c3778987-3778913, c3778594-3778436, c3778221-3778107, c3777637-3777534, c3777186-3777079, c3776674-3776579, c3776287-3776126, c3775098-3775012, c3774566-3774487, c3774458-3774230, c3773846-3773791, c3773519-3773369, c3773002-3772954, c3771232-3771156, c3770914-3770774, c3770533-3770480, c3770078-3769963, c3769260-3769194, c3768931-3768821, c3768716-3768618, c3768303-3768130, c3766504-3766419, c3766039-3765931, c3765749-3765594, c3764100-3764003, c3763913-3763818, c3763348-3763126, c3761848-3761686, c3761601-3761440, c3761317-3761247, c3761054-3760894, c3760804-3760743, c3760243-3760052, c3759773-3759659, c3759479-3759335, c3759026-3758907, c37585...] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039202-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4237150 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c4242424-4242413, c4241829-4241735, c4240316-4240121, c4239389-4239316, c4237285-4237150, c4234746-4234660, c4233165-4232964, c4231041-4230749, c4230304-4230170, c4228156-4228076, c4226999-4226839, c4223628-4223451)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039233-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4318144 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:4313111-4313150, 4313238-4313258, 4313370-4313521, 4313610-4313861, 4313959-4314120, 4314199-4314347, 4314464-4314614, 4314716-4314873, 4314957-4315122, 4315203-4315328, 4315410-4315628, 4315736-4315953, 4316050-4316147, 4316253-4316377, 4316459-4316560, 4316671-4316790, 4316915-4317101, 4317197-4317290, 4317411-4317596, 4317689-4317827, 4317925-4318144, 4318243-4318760, 4318839-4318880, 4318956-4319024, 4319132-4319281)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039242-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4403246 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c4408262-4408223, c4408124-4408104, c4408012-4407861, c4407773-4407522, c4407424-4407263, c4407184-4407036, c4406919-4406769, c4406667-4406510, c4406426-4406261, c4406180-4406055, c4405973-4405755, c4405654-4405437, c4405340-4405243, c4405137-4405013, c4404931-4404830, c4404719-4404600, c4404475-4404289, c4404193-4404100, c4403979-4403794, c4403701-4403563, c4403465-4403246, c4403147-4402645, c4402568-4402524, c4402447-4402379, c4402271-4402065, c4401814-4401672, c4401541-4401403, c4401317-4401188, c4401093-4400916, c4400765-4400671, c4400567-4400473, c4400357-4400192, c4400061-4399900, c4399809-4399697)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039253-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5376966 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:5373923-5373982, 5374255-5374370, 5376139-5376208, 5376473-5376565, 5376874-5376966, 5377660-5377785, 5378045-5378266, 5378939-5379031, 5379715-5379793, 5379892-5379946, 5380058-5380155, 5380893-5380979, 5381301-5381387, 5382082-5382153, 5382733-5382834, 5383216-5383325, 5383660-5383775, 5385310-5385310)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039319-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5376966 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:5373923-5373982, 5374255-5374370, 5376139-5376208, 5376473-5376565, 5376874-5376966, 5377660-5377785, 5378045-5378266, 5378939-5379031, 5379715-5379793, 5379892-5379946, 5380058-5380155, 5380893-5380979, 5381301-5381387, 5382082-5382153, 5382733-5382834, 5383216-5383325, 5383660-5383775, 5384277-5384350, 5385310-5385401)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039319-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:5788549-5788604, 5788740-5788846, 5789571-5790164, 5790762-5790899, 5791271-5791365, 5791533-5791783, 5791973-5792060, 5792825-5793037, 5793376-5793542, 5794844-5794959, 5796567-5796573, 5796604-5796719, 5797511-5797587, 5797695-5797829, 5799497-5799674, 5800350-5800397, 5800886-5800908)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039369-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5892266 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:5891009-5891014, 5891094-5891201, 5891451-5891604, 5892199-5892266, 5894336-5894457, 5894877-5895003, 5895437-5895541, 5895822-5895924, 5896826-5897052, 5897185-5897358, 5897551-5897747, 5898296-5898464)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039383-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c6110269-6110230, c6109109-6108989, c6107331-6107274, c6106028-6105909, c6105346-6105293, c6104386-6104328, c6103178-6102995, c6101418-6101374, c6101225-6101130, c6098149-6098075, c6096823-6096812, c6095475-6095413, c6093214-6093102, c6092330-6092279, c6091890-6091790, c6091467-6091362, c6091068-6090860, c6090631-6090562, c6090356-6090262, c6090066-6089864, c6088876-6088784, c6088446-6088211, c6088088-6087979, c6087732-6087622, c6087491-6087344)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039400-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:6289757-6289781, 6290496-6290669, 6292065-6292231, 6292661-6292798, 6292930-6293081, 6293288-6293399, 6293536-6293625, 6293720-6293906, 6294001-6294161, 6294284->6294337)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039417-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6294337 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:6289757-6289781, 6290496-6290669, 6292065-6292231, 6292661-6292798, 6292930-6293081, 6293288-6293399, 6293536-6293625, 6293720-6293906, 6294001-6294161, 6294284->6294337)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039417-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:6289757-6289781, 6290496-6290669, 6291224-6291262, 6292065-6292231, 6292661-6292798, 6292930->6293060)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039417-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6293060 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:6289757-6289781, 6290496-6290669, 6291224-6291262, 6292065-6292231, 6292661-6292798, 6292930->6293060)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039417-T2]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:6289757-6289781, 6290496-6290669, 6292065-6292231, 6292661-6292798, 6292930-6293081, 6293288->6293423)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039417-T3]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6293423 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:6289757-6289781, 6290496-6290669, 6292065-6292231, 6292661-6292798, 6292930-6293081, 6293288->6293423)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039417-T3]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:7006438-7006507, 7006784-7006823, 7007982-7008045, 7009392-7009469, 7009694-7009807, 7009936-7010003, 7010935-7011034, 7011148-7011283, 7013421-7013447, 7013634-7013665, 7013744-7013798, 7013911-7014071, 7015642-7015651, 7015854-7015904, 7016022-7016223, 7016983-7017096, 7017186-7017327)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039501-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:7087922-7087979, 7088082-7088369, 7088738-7089001, 7089558-7089692, 7090242-7090249, 7090376-7090538, 7091453-7091675, 7091782-7091897, 7092135-7092431, 7092561-7092964, 7093112-7093280, 7093381-7093570, 7093792-7093907, 7093987-7094113, 7094243-7094439, 7094768-7094862, 7095089-7095221, 7095376-7095480, 7095627-7095737, 7095827-7095980, 7097770-7097812)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039507-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7212099 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c7215130-7215029, c7214850-7214724, c7214623-7214503, c7214279-7214193, c7214024-7213938, c7213785-7213725, c7213499-7213323, c7212932-7212588, c7212434-7212333, c7212242-7212099, c7211745-7211622, c7211110-7211031, c7210934-7210764, c7210441-7210259)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039520-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7211745 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c7215130-7215029, c7214850-7214724, c7214623-7214503, c7214279-7214193, c7214024-7213938, c7213785-7213725, c7213499-7213323, c7212932-7212588, c7212434-7212333, c7212242-7212099, c7211745-7211622, c7211110-7211031, c7210934-7210764, c7210441-7210259)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039520-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7290621 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c7292870-7292375, c7291917-7291788, c7291484-7291389, c7291146-7291042, c7290937-7290843, c7290753-7290621, c7290529-7290446, c7290352-7290256, c7290143-7289841)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039531-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c7656195-7656077, c7655958-7655841, c7655605-7655516, c7654851-7654774, c7654354-7654253, c7654025-7653844, c7652965-7652953, c7652717-7652369, c7652301-7652276, c7652264-7652160, c7651799-7651708, c7650174-7650081, c7649975-7649853, c7648644-7648519, c7648193-7648027, c7647067-7646920, c7645343-7645190, c7645018-7644862, c7644719-7644623, c7644496-7644420, c7644268-7644160, c7644011-7643892, c7643572-7643373, c7641604-7641447, c7641152-7641145)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039581-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c8324270-8324254, c8324140-8324128, c8324083-8323931)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039680-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8778729 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c8785381-8785211, c8784734-8784592, c8784341-8784252, c8784143-8783976, c8783805-8783625, c8783261-8783100, c8782775-8782688, c8782432-8782334, c8781788-8781665, c8781538-8781379, c8781192-8781074, c8780753-8780589, c8780317-8780203, c8779714-8779571, c8779371-8779158, c8778846-8778729, c8778619-8778463, c8778162-8778020, c8777780-8777606, c8777507-8777426, c8777203-8777039, c8776925-8776705, c8776506-8776416, c8776177-8775966, c8775590-8775492)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039724-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9052168 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:9050316-9050438, 9050742-9050862, 9050956-9051087, 9051393-9051507, 9051744-9051855, 9052082-9052168, 9052305-9052367, 9052461-9052540, 9052745-9052871, 9052947-9053042, 9053181-9053246)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039758-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9087792 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:9087790-9087792, 9088044-9088215, 9088430-9088540, 9088804-9088932, 9089078-9089139, 9089280-9089380, 9089918-9090095, 9090499-9090658, 9090793-9090872, 9091360-9091512, 9091940-9092075, 9092296-9092441, 9092572-9092718, 9092886-9093038, 9093393-9093535, 9093951-9094062, 9094224-9094316)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039764-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9118374 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:9114305-9114341, 9114672-9116510, 9116747-9116867, 9116958-9117194, 9117394-9117484, 9117893-9118112, 9118232-9118374, 9118817-9119017, 9119909-9120007, 9120347-9120376)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039767-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9118374 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:9114305-9114341, 9114672-9116510, 9116765-9116867, 9116958-9117194, 9117394-9117484, 9117893-9118112, 9118232-9118374, 9118817-9119017, 9119909-9120028)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039767-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10485868 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:10485163-10485262, 10485425-10485531, 10485700-10485868, 10486322-10486427, 10486640-10486671, 10487820-10487839)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039932-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10536590 of lcl|scaffold_24 FEATURE: CDS: hypothetical protein [(lcl|scaffold_24:c10539016-10538951, c10538817-10538710, c10537041-10536928, c10536740-10536590, c10535675-10535479)] [lcl|scaffold_24: delta, dna len= 10845424] -> [gnl|ncbi|FUN_039941-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 818729 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:814123-814128, 815392-816051, 818681-818729, 818757-819172)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1416183 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c1417874-1417762, c1416312-1416183, c1415155-1415008, c1414233-1414155, c1414013-1413777)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2381819 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c2386131-2385774, c2384835-2384729, c2384631-2384478, c2384042-2383698, c2383081-2382929, c2382616-2382494, c2382103-2382014, c2381901-<2381819)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2396811 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c2397417-2397384, c2397122-2397024, c2396873-2396811, c2396670-2396638, c2396489-2396465, c2395667-2395535, c2395316-2395157, c2394992-2394899, c2394532-2394441, c2394308-2394254, c2393901-2393774, c2392884-2392803, c2391958-2391810, c2391240-2391078, c2390491-2390411, c2390136-2389991, c2389650-2389554, c2388630-2388492, c2388079-2387947, c2387298-2386816)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2924153 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:2919425-2919466, 2919992-2920150, 2920287-2920475, 2920725-2920890, 2921819-2921961, 2922569-2922765, 2922968-2923115, 2923239-2923446, 2923547-2923619, 2923824->2924153)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2964511 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c2965098-2964902, c2964609-2964511, c2963133-2962922, c2960433-2959159)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3347316 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c3347588-3347516, c3347396-3347316, c3347224-3347079)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3433703 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:3433581-3433703, 3433733-3434976)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3655844 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:3655114-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656073-3656771)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3656073 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:3655114-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656073-3656771)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3655844 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:3655114-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656570-3656771)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3656570 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:3655114-3655166, 3655371-3655461, 3655546-3655651, 3655777-3655844, 3656570-3656771)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3745738 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c3784017-3784008, c3783719-3783652, c3783006-3782863, c3782733-3782611, c3781579-3781544, c3781247-3781182, c3779394-3779329, c3778987-3778913, c3778594-3778436, c3778221-3778107, c3777637-3777534, c3777186-3777079, c3776674-3776579, c3776287-3776126, c3775098-3775012, c3774566-3774487, c3774458-3774230, c3773846-3773791, c3773519-3773369, c3773002-3772954, c3771232-3771156, c3770914-3770774, c3770533-3770480, c3770078-3769963, c3769260-3769194, c3768931-3768821, c3768716-3768618, c3768303-3768130, c3766504-3766419, c3766039-3765931, c3765749-3765594, c3764100-3764003, c3763913-3763818, c3763348-3763126, c3761848-3761686, c3761601-3761440, c3761317-3761247, c3761054-3760894, c3760804-3760743, c3760243-3760052, c3759773-3759659, c3759479-3759335, c3759026-3758907, c37585...] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4237150 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c4242424-4242413, c4241829-4241735, c4240316-4240121, c4239389-4239316, c4237285-4237150, c4234746-4234660, c4233165-4232964, c4231041-4230749, c4230304-4230170, c4228156-4228076, c4226999-4226839, c4223628-4223451)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4318144 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:4313108-4313150, 4313238-4313258, 4313370-4313521, 4313610-4313861, 4313959-4314120, 4314199-4314347, 4314464-4314614, 4314716-4314873, 4314957-4315122, 4315203-4315328, 4315410-4315628, 4315736-4315953, 4316050-4316147, 4316253-4316377, 4316459-4316560, 4316671-4316790, 4316915-4317101, 4317197-4317290, 4317411-4317596, 4317689-4317827, 4317925-4318144, 4318243-4318760, 4318839-4318880, 4318956-4319024, 4319132-4319281)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4403246 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c4408263-4408223, c4408124-4408104, c4408012-4407861, c4407773-4407522, c4407424-4407263, c4407184-4407036, c4406919-4406769, c4406667-4406510, c4406426-4406261, c4406180-4406055, c4405973-4405755, c4405654-4405437, c4405340-4405243, c4405137-4405013, c4404931-4404830, c4404719-4404600, c4404475-4404289, c4404193-4404100, c4403979-4403794, c4403701-4403563, c4403465-4403246, c4403147-4402645, c4402568-4402524, c4402447-4402379, c4402271-4402065, c4401814-4401672, c4401541-4401403, c4401317-4401188, c4401093-4400916, c4400765-4400671, c4400567-4400473, c4400357-4400192, c4400061-4399900, c4399809-4399438)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5376966 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:5373913-5373982, 5374255-5374370, 5376139-5376208, 5376473-5376565, 5376874-5376966, 5377660-5377785, 5378045-5378266, 5378939-5379031, 5379715-5379793, 5379892-5379946, 5380058-5380155, 5380893-5380979, 5381301-5381387, 5382082-5382153, 5382733-5382834, 5383216-5383325, 5383660-5383775, 5385310-5387190)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5376966 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:5373913-5373982, 5374255-5374370, 5376139-5376208, 5376473-5376565, 5376874-5376966, 5377660-5377785, 5378045-5378266, 5378939-5379031, 5379715-5379793, 5379892-5379946, 5380058-5380155, 5380893-5380979, 5381301-5381387, 5382082-5382153, 5382733-5382834, 5383216-5383325, 5383660-5383775, 5384277-5384350, 5385310-5387190)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5892266 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:5891009-5891014, 5891094-5891201, 5891451-5891604, 5892199-5892266, 5894336-5894457, 5894877-5895003, 5895437-5895541, 5895822-5895924, 5896826-5897052, 5897185-5897358, 5897551-5897747, 5898296-5898679)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6294337 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:6289628-6289781, 6290496-6290669, 6292065-6292231, 6292661-6292798, 6292930-6293081, 6293288-6293399, 6293536-6293625, 6293720-6293906, 6294001-6294161, 6294284->6294337)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6293060 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:6289628-6289781, 6290496-6290669, 6291224-6291262, 6292065-6292231, 6292661-6292798, 6292930->6293060)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6293423 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:6289628-6289781, 6290496-6290669, 6292065-6292231, 6292661-6292798, 6292930-6293081, 6293288->6293423)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7212099 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c7215252-7215029, c7214850-7214724, c7214623-7214503, c7214279-7214193, c7214024-7213938, c7213785-7213725, c7213499-7213323, c7212932-7212588, c7212434-7212333, c7212242-7212099, c7211745-7211622, c7211110-7211031, c7210934-7210764, c7210441-7209891)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7211745 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c7215252-7215029, c7214850-7214724, c7214623-7214503, c7214279-7214193, c7214024-7213938, c7213785-7213725, c7213499-7213323, c7212932-7212588, c7212434-7212333, c7212242-7212099, c7211745-7211622, c7211110-7211031, c7210934-7210764, c7210441-7209891)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7290621 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c7292870-7292375, c7291917-7291788, c7291484-7291389, c7291146-7291042, c7290937-7290843, c7290753-7290621, c7290529-7290446, c7290352-7290256, c7290143-7289025)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8749461 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c8755956-8755936, c8755907-8755777, c8754216-8754060, c8752009-8751896, c8751166-8751086, c8750849-8750668, c8750512-8749461, c8749382-8748789)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8778729 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c8785562-8785211, c8784734-8784592, c8784341-8784252, c8784143-8783976, c8783805-8783625, c8783261-8783100, c8782775-8782688, c8782432-8782334, c8781788-8781665, c8781538-8781379, c8781192-8781074, c8780753-8780589, c8780317-8780203, c8779714-8779571, c8779371-8779158, c8778846-8778729, c8778619-8778463, c8778162-8778020, c8777780-8777606, c8777507-8777426, c8777203-8777039, c8776925-8776705, c8776506-8776416, c8776177-8775966, c8775590-8775492)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8992307 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:8985882-8986138, 8986794-8987864, 8988004-8988034, 8988300-8988445, 8988561-8988647, 8989430-8989612, 8990536-8990715, 8990837-8991049, 8991478-8991597, 8991811-8991951, 8992043-8992307, 8992352-8992999)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9052168 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:9050152-9050438, 9050742-9050862, 9050956-9051087, 9051393-9051507, 9051744-9051855, 9052082-9052168, 9052305-9052367, 9052461-9052540, 9052745-9052871, 9052947-9053042, 9053181-9053631)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9087792 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:9087731-9087792, 9088044-9088215, 9088430-9088540, 9088804-9088932, 9089078-9089139, 9089280-9089380, 9089918-9090095, 9090499-9090658, 9090793-9090872, 9091360-9091512, 9091940-9092075, 9092296-9092441, 9092572-9092718, 9092886-9093038, 9093393-9093535, 9093951-9094062, 9094224-9095493)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9118374 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:9113896-9114007, 9114255-9114341, 9114672-9116510, 9116747-9116867, 9116958-9117194, 9117394-9117484, 9117893-9118112, 9118232-9118374, 9118817-9119017, 9119909-9120007, 9120347-9120807)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9118374 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:9113896-9114007, 9114255-9114341, 9114672-9116510, 9116765-9116867, 9116958-9117194, 9117394-9117484, 9117893-9118112, 9118232-9118374, 9118817-9119017, 9119909-9120807)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10485868 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:10484203-10484290, 10485154-10485262, 10485425-10485531, 10485700-10485868, 10486322-10486427, 10486640-10486671, 10487820-10488491)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10536590 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:c10539016-10538951, c10538817-10538710, c10537041-10536928, c10536740-10536590, c10535675-10535027)] [lcl|scaffold_24: delta, dna len= 10845424]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10668156 of lcl|scaffold_24 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_24:10668048-10668156, 10668266-10668422, 10668754-10668969, 10669138-10669281, 10669435-10669548, 10669683-10669857, 10670195-10670291, 10670535-10670837)] [lcl|scaffold_24: delta, dna len= 10845424]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_69:c21504-21496, c20927-20856, c20656-20576, c20140-20096, c18135-17959, c17624-17617, c17340-17314, c16601-16575, c16392-16366, c15845-15819, c15329-15270, c14758-14642, c14527-14452, c13850-13815, c13706-13689, c13597-13544, c13454-13410, c13215-13150, c13049-13005, c12766-12731, c12635-12546, c12339-12286, c12193-12137, c12020-11994, c11859-11791, c11169-11116, c10919-10833, c10762-10748)] [lcl|scaffold_69: delta, dna len= 25000] -> [gnl|ncbi|FUN_044545-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_224:c>9149-9106, c6788-6711, c5861-5665, c3588-3524, c3425-3319, c3073-<2970)] [lcl|scaffold_224: raw, dna len= 9370] -> [gnl|ncbi|FUN_044812-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2970 of lcl|scaffold_224 FEATURE: CDS: hypothetical protein [(lcl|scaffold_224:c>9149-9106, c6788-6711, c5861-5665, c3588-3524, c3425-3319, c3073-<2970)] [lcl|scaffold_224: raw, dna len= 9370] -> [gnl|ncbi|FUN_044812-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2970 of lcl|scaffold_224 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_224:c>9149-9106, c6788-6711, c5861-5665, c3588-3524, c3425-3319, c3073-<2970)] [lcl|scaffold_224: raw, dna len= 9370]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_349:c>5846-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854] -> [gnl|ncbi|FUN_044952-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_349:c>5846-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854] -> [gnl|ncbi|FUN_044952-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5846 of lcl|scaffold_349 FEATURE: CDS: hypothetical protein [(lcl|scaffold_349:c>5846-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854] -> [gnl|ncbi|FUN_044952-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 46 of lcl|scaffold_349 FEATURE: CDS: hypothetical protein [(lcl|scaffold_349:c>5846-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854] -> [gnl|ncbi|FUN_044952-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_349:c>5848-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5848 of lcl|scaffold_349 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_349:c>5848-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 46 of lcl|scaffold_349 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_349:c>5848-5634, c5096-4994, c4689-4502, c3920-3798, c3419-3213, c2996-2916, c2367-2133, c1878-1562, c1370-1184, c688-546, c191-<46)] [lcl|scaffold_349: raw, dna len= 7854]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2429 of lcl|scaffold_359 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_359:292-2429, 2502-4516)] [lcl|scaffold_359: raw, dna len= 7781]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_404:811-898, 1372-1469, 2108-2233, 2479-2562, 3536-3619, 3708-3832, 4228-4393, 5421-5566, 5635-5779, 6904->7096)] [lcl|scaffold_404: raw, dna len= 7246] -> [gnl|ncbi|FUN_044994-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7096 of lcl|scaffold_404 FEATURE: CDS: hypothetical protein [(lcl|scaffold_404:811-898, 1372-1469, 2108-2233, 2479-2562, 3536-3619, 3708-3832, 4228-4393, 5421-5566, 5635-5779, 6904->7096)] [lcl|scaffold_404: raw, dna len= 7246] -> [gnl|ncbi|FUN_044994-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7096 of lcl|scaffold_404 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_404:811-898, 1372-1469, 2108-2233, 2479-2562, 3536-3619, 3708-3832, 4228-4393, 5421-5566, 5635-5779, 6904->7096)] [lcl|scaffold_404: raw, dna len= 7246]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_419:178-292, 643-656, 965-1028, 1748-1935, 6350-6478, 6501-6605)] [lcl|scaffold_419: delta, dna len= 7104] -> [gnl|ncbi|FUN_045006-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_474:<3719-3790, 4096-4164, 4440-4543, 5508-5607, 6077->6173)] [lcl|scaffold_474: delta, dna len= 6679] -> [gnl|ncbi|FUN_045054-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6173 of lcl|scaffold_474 FEATURE: CDS: hypothetical protein [(lcl|scaffold_474:<3719-3790, 4096-4164, 4440-4543, 5508-5607, 6077->6173)] [lcl|scaffold_474: delta, dna len= 6679] -> [gnl|ncbi|FUN_045054-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_474:<3717-3790, 4096-4164, 4440-4543, 5508-5607, 6077->6173)] [lcl|scaffold_474: delta, dna len= 6679]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3717 of lcl|scaffold_474 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_474:<3717-3790, 4096-4164, 4440-4543, 5508-5607, 6077->6173)] [lcl|scaffold_474: delta, dna len= 6679]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6173 of lcl|scaffold_474 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_474:<3717-3790, 4096-4164, 4440-4543, 5508-5607, 6077->6173)] [lcl|scaffold_474: delta, dna len= 6679]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_489:<375-542, 1349-1445, 1842-1939, 2088-2180, 3482-3552, 3937-4044, 4222-4390)] [lcl|scaffold_489: delta, dna len= 6539] -> [gnl|ncbi|FUN_045070-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 375 of lcl|scaffold_489 FEATURE: CDS: hypothetical protein [(lcl|scaffold_489:<375-542, 1349-1445, 1842-1939, 2088-2180, 3482-3552, 3937-4044, 4222-4390)] [lcl|scaffold_489: delta, dna len= 6539] -> [gnl|ncbi|FUN_045070-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 375 of lcl|scaffold_489 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_489:<375-542, 1349-1445, 1842-1939, 2088-2180, 3482-3552, 3937-4044, 4222-4509)] [lcl|scaffold_489: delta, dna len= 6539]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_614:1121-1249, 1368-1413, 1500-1591, 1761-1804, 1995-2055, 2563-2610, 2711-2776, 2940-3010, 3103-3189, 3367-3535, 4048-4169, 4353-4496, 4734-4821, 5055->5129)] [lcl|scaffold_614: raw, dna len= 5371] -> [gnl|ncbi|FUN_045172-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3189 of lcl|scaffold_614 FEATURE: CDS: hypothetical protein [(lcl|scaffold_614:1121-1249, 1368-1413, 1500-1591, 1761-1804, 1995-2055, 2563-2610, 2711-2776, 2940-3010, 3103-3189, 3367-3535, 4048-4169, 4353-4496, 4734-4821, 5055->5129)] [lcl|scaffold_614: raw, dna len= 5371] -> [gnl|ncbi|FUN_045172-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5129 of lcl|scaffold_614 FEATURE: CDS: hypothetical protein [(lcl|scaffold_614:1121-1249, 1368-1413, 1500-1591, 1761-1804, 1995-2055, 2563-2610, 2711-2776, 2940-3010, 3103-3189, 3367-3535, 4048-4169, 4353-4496, 4734-4821, 5055->5129)] [lcl|scaffold_614: raw, dna len= 5371] -> [gnl|ncbi|FUN_045172-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3189 of lcl|scaffold_614 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_614:1121-1249, 1368-1413, 1500-1591, 1761-1804, 1995-2055, 2563-2610, 2711-2776, 2940-3010, 3103-3189, 3367-3535, 4048-4169, 4353-4496, 4734-4821, 5055->5129)] [lcl|scaffold_614: raw, dna len= 5371]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 5129 of lcl|scaffold_614 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_614:1121-1249, 1368-1413, 1500-1591, 1761-1804, 1995-2055, 2563-2610, 2711-2776, 2940-3010, 3103-3189, 3367-3535, 4048-4169, 4353-4496, 4734-4821, 5055->5129)] [lcl|scaffold_614: raw, dna len= 5371]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_654:<94-254, 703-814, 1256-1374, 1764-1973, 2342-2494)] [lcl|scaffold_654: delta, dna len= 5114]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 94 of lcl|scaffold_654 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_654:<94-254, 703-814, 1256-1374, 1764-1973, 2342-2494)] [lcl|scaffold_654: delta, dna len= 5114]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_719:2276-2377, 3044-3196, 3875-4038, 4445-4496, 4674->4824)] [lcl|scaffold_719: delta, dna len= 4857] -> [gnl|ncbi|FUN_045252-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4824 of lcl|scaffold_719 FEATURE: CDS: hypothetical protein [(lcl|scaffold_719:2276-2377, 3044-3196, 3875-4038, 4445-4496, 4674->4824)] [lcl|scaffold_719: delta, dna len= 4857] -> [gnl|ncbi|FUN_045252-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4824 of lcl|scaffold_719 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_719:1898-1934, 2269-2377, 3044-3196, 3875-4038, 4445-4496, 4674->4824)] [lcl|scaffold_719: delta, dna len= 4857]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_734:c>4429-4264, c4120-3978, c3764-3605, c3382-3301, c3202-3115, c2988-2500)] [lcl|scaffold_734: raw, dna len= 4749] -> [gnl|ncbi|FUN_045267-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4429 of lcl|scaffold_734 FEATURE: CDS: hypothetical protein [(lcl|scaffold_734:c>4429-4264, c4120-3978, c3764-3605, c3382-3301, c3202-3115, c2988-2500)] [lcl|scaffold_734: raw, dna len= 4749] -> [gnl|ncbi|FUN_045267-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_734:c>4430-4264, c4120-3978, c3764-3605, c3382-3301, c3202-3115, c2988-2500)] [lcl|scaffold_734: raw, dna len= 4749]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_749:c4613-4518, c4331-3759, c3617-3509, c2679-2561, c2447-2316, c1607-1494, c1113-1029, c700-<582)] [lcl|scaffold_749: delta, dna len= 4682] -> [gnl|ncbi|FUN_045278-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 582 of lcl|scaffold_749 FEATURE: CDS: hypothetical protein [(lcl|scaffold_749:c4613-4518, c4331-3759, c3617-3509, c2679-2561, c2447-2316, c1607-1494, c1113-1029, c700-<582)] [lcl|scaffold_749: delta, dna len= 4682] -> [gnl|ncbi|FUN_045278-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 582 of lcl|scaffold_749 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_749:c4613-4518, c4331-3759, c3617-3509, c2679-2561, c2447-2316, c1607-1494, c1113-1029, c700-<582)] [lcl|scaffold_749: delta, dna len= 4682]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_994:<223-354, 1156->1333)] [lcl|scaffold_994: raw, dna len= 3641] -> [gnl|ncbi|FUN_045418-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1333 of lcl|scaffold_994 FEATURE: CDS: hypothetical protein [(lcl|scaffold_994:<223-354, 1156->1333)] [lcl|scaffold_994: raw, dna len= 3641] -> [gnl|ncbi|FUN_045418-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_994:<221-354, 1156->1333)] [lcl|scaffold_994: raw, dna len= 3641]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 221 of lcl|scaffold_994 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_994:<221-354, 1156->1333)] [lcl|scaffold_994: raw, dna len= 3641]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1333 of lcl|scaffold_994 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_994:<221-354, 1156->1333)] [lcl|scaffold_994: raw, dna len= 3641]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1204:<1122-1180, 1808-1880, 2450-2578, 2761->2887)] [lcl|scaffold_1204: raw, dna len= 2987] -> [gnl|ncbi|FUN_045526-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2887 of lcl|scaffold_1204 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1204:<1122-1180, 1808-1880, 2450-2578, 2761->2887)] [lcl|scaffold_1204: raw, dna len= 2987] -> [gnl|ncbi|FUN_045526-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2887 of lcl|scaffold_1204 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1204:<1122-1180, 1808-1880, 2450-2578, 2761->2887)] [lcl|scaffold_1204: raw, dna len= 2987]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1279:<82-206, 443-524, 864-994, 1345-1459, 1611-1672, 1928-2014, 2466->2611)] [lcl|scaffold_1279: raw, dna len= 2784] -> [gnl|ncbi|FUN_045555-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2611 of lcl|scaffold_1279 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1279:<82-206, 443-524, 864-994, 1345-1459, 1611-1672, 1928-2014, 2466->2611)] [lcl|scaffold_1279: raw, dna len= 2784] -> [gnl|ncbi|FUN_045555-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1279:<80-206, 443-524, 864-994, 1345-1459, 1611-1672, 1928-2014, 2466->2611)] [lcl|scaffold_1279: raw, dna len= 2784]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 80 of lcl|scaffold_1279 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1279:<80-206, 443-524, 864-994, 1345-1459, 1611-1672, 1928-2014, 2466->2611)] [lcl|scaffold_1279: raw, dna len= 2784]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2611 of lcl|scaffold_1279 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1279:<80-206, 443-524, 864-994, 1345-1459, 1611-1672, 1928-2014, 2466->2611)] [lcl|scaffold_1279: raw, dna len= 2784]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1409:c>2179-2129, c2033-1865, c692-610, c279-<199)] [lcl|scaffold_1409: raw, dna len= 2482] -> [gnl|ncbi|FUN_045608-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2179 of lcl|scaffold_1409 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1409:c>2179-2129, c2033-1865, c692-610, c279-<199)] [lcl|scaffold_1409: raw, dna len= 2482] -> [gnl|ncbi|FUN_045608-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1409:c>2180-2129, c2033-1865, c692-610, c279-<199)] [lcl|scaffold_1409: raw, dna len= 2482]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2180 of lcl|scaffold_1409 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1409:c>2180-2129, c2033-1865, c692-610, c279-<199)] [lcl|scaffold_1409: raw, dna len= 2482]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1549:<346-461, 543-728, 852-963, 1256-1384, 1891->2223)] [lcl|scaffold_1549: raw, dna len= 2236] -> [gnl|ncbi|FUN_045661-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 346 of lcl|scaffold_1549 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1549:<346-461, 543-728, 852-963, 1256-1384, 1891->2223)] [lcl|scaffold_1549: raw, dna len= 2236] -> [gnl|ncbi|FUN_045661-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1549:<344-461, 543-728, 852-963, 1256-1384, 1891->2223)] [lcl|scaffold_1549: raw, dna len= 2236]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1829:<106-263, 1080-1175, 1565->1726)] [lcl|scaffold_1829: delta, dna len= 1895]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 106 of lcl|scaffold_1829 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1829:<106-263, 1080-1175, 1565->1726)] [lcl|scaffold_1829: delta, dna len= 1895]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1914:<148->326] [lcl|scaffold_1914: delta, dna len= 1777] -> [gnl|ncbi|FUN_045806-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2044:c>1468-1352, c1209-1076, c247-<123)] [lcl|scaffold_2044: raw, dna len= 1637] -> [gnl|ncbi|FUN_045850-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2044:c>1468-1352, c1209-1076, c247-<123)] [lcl|scaffold_2044: raw, dna len= 1637] -> [gnl|ncbi|FUN_045850-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1468 of lcl|scaffold_2044 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2044:c>1468-1352, c1209-1076, c247-<123)] [lcl|scaffold_2044: raw, dna len= 1637] -> [gnl|ncbi|FUN_045850-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 123 of lcl|scaffold_2044 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2044:c>1468-1352, c1209-1076, c247-<123)] [lcl|scaffold_2044: raw, dna len= 1637] -> [gnl|ncbi|FUN_045850-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2044:c>1469-1352, c1209-1076, c247-<123)] [lcl|scaffold_2044: raw, dna len= 1637]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 123 of lcl|scaffold_2044 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2044:c>1469-1352, c1209-1076, c247-<123)] [lcl|scaffold_2044: raw, dna len= 1637]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2064:<658-958, 1082-1278)] [lcl|scaffold_2064: raw, dna len= 1616] -> [gnl|ncbi|FUN_045860-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 658 of lcl|scaffold_2064 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2064:<658-958, 1082-1278)] [lcl|scaffold_2064: raw, dna len= 1616] -> [gnl|ncbi|FUN_045860-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 658 of lcl|scaffold_2064 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2064:<658-958, 1082-1279)] [lcl|scaffold_2064: raw, dna len= 1616]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2074:c1399-1238, c1137-937, c489-<356)] [lcl|scaffold_2074: raw, dna len= 1608] -> [gnl|ncbi|FUN_045865-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 356 of lcl|scaffold_2074 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2074:c1399-1238, c1137-937, c489-<356)] [lcl|scaffold_2074: raw, dna len= 1608] -> [gnl|ncbi|FUN_045865-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 356 of lcl|scaffold_2074 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2074:c1399-1238, c1137-937, c489-<356)] [lcl|scaffold_2074: raw, dna len= 1608]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_2234:c>562-<96] [lcl|scaffold_2234: raw, dna len= 1454] -> [gnl|ncbi|FUN_045922-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2269:c>1308-1244, c1142-1065, c906-831, c525-<440)] [lcl|scaffold_2269: raw, dna len= 1423] -> [gnl|ncbi|FUN_045932-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1308 of lcl|scaffold_2269 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2269:c>1308-1244, c1142-1065, c906-831, c525-<440)] [lcl|scaffold_2269: raw, dna len= 1423] -> [gnl|ncbi|FUN_045932-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2269:c>1309-1244, c1142-1065, c906-831, c525-<440)] [lcl|scaffold_2269: raw, dna len= 1423]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2384:c>1235-1044, c858-631)] [lcl|scaffold_2384: raw, dna len= 1330] -> [gnl|ncbi|FUN_045969-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1235 of lcl|scaffold_2384 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2384:c>1235-1044, c858-631)] [lcl|scaffold_2384: raw, dna len= 1330] -> [gnl|ncbi|FUN_045969-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2384:c>1236-1044, c858-631)] [lcl|scaffold_2384: raw, dna len= 1330]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2569:<251-365, 845->1006)] [lcl|scaffold_2569: raw, dna len= 1199]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 251 of lcl|scaffold_2569 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2569:<251-365, 845->1006)] [lcl|scaffold_2569: raw, dna len= 1199]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2669:<615-765, 856-1157)] [lcl|scaffold_2669: raw, dna len= 1157]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 615 of lcl|scaffold_2669 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2669:<615-765, 856-1157)] [lcl|scaffold_2669: raw, dna len= 1157]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_3264:<165->513] [lcl|scaffold_3264: raw, dna len= 1041] -> [gnl|ncbi|FUN_046162-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3299:109-237, 691->919)] [lcl|scaffold_3299: raw, dna len= 1036] -> [gnl|ncbi|FUN_046172-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 919 of lcl|scaffold_3299 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3299:109-237, 691->919)] [lcl|scaffold_3299: raw, dna len= 1036] -> [gnl|ncbi|FUN_046172-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 919 of lcl|scaffold_3299 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3299:75-237, 691->919)] [lcl|scaffold_3299: raw, dna len= 1036]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3394:c>579-388, c209-<64)] [lcl|scaffold_3394: raw, dna len= 1023] -> [gnl|ncbi|FUN_046188-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 579 of lcl|scaffold_3394 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3394:c>579-388, c209-<64)] [lcl|scaffold_3394: raw, dna len= 1023] -> [gnl|ncbi|FUN_046188-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3394:c>580-388, c209-<64)] [lcl|scaffold_3394: raw, dna len= 1023]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 580 of lcl|scaffold_3394 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3394:c>580-388, c209-<64)] [lcl|scaffold_3394: raw, dna len= 1023]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3549:<417-606, 882->982)] [lcl|scaffold_3549: raw, dna len= 1001] -> [gnl|ncbi|FUN_046221-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3549:<417-606, 882->982)] [lcl|scaffold_3549: raw, dna len= 1001] -> [gnl|ncbi|FUN_046221-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 417 of lcl|scaffold_3549 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3549:<417-606, 882->982)] [lcl|scaffold_3549: raw, dna len= 1001] -> [gnl|ncbi|FUN_046221-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 982 of lcl|scaffold_3549 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3549:<417-606, 882->982)] [lcl|scaffold_3549: raw, dna len= 1001] -> [gnl|ncbi|FUN_046221-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3549:<415-606, 882->982)] [lcl|scaffold_3549: raw, dna len= 1001]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 982 of lcl|scaffold_3549 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3549:<415-606, 882->982)] [lcl|scaffold_3549: raw, dna len= 1001]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_3559:c>586-500, c142-<27)] [lcl|scaffold_3559: raw, dna len= 1000] -> [gnl|ncbi|FUN_046223-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 586 of lcl|scaffold_3559 FEATURE: CDS: hypothetical protein [(lcl|scaffold_3559:c>586-500, c142-<27)] [lcl|scaffold_3559: raw, dna len= 1000] -> [gnl|ncbi|FUN_046223-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3559:c>587-500, c142-<27)] [lcl|scaffold_3559: raw, dna len= 1000]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 587 of lcl|scaffold_3559 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_3559:c>587-500, c142-<27)] [lcl|scaffold_3559: raw, dna len= 1000]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:6555-6575, 10101-10261, 12219-12388, 13247-13369, 13573-13743, 14513-14627, 15282-15466, 15668-15799, 17229-17372, 18046-18157, 18949-19109, 19585-19735, 19851-19978, 22129-22329, 22537-22607, 23205-23433, 23808-23920, 24039-24294, 24743-24865, 25711-25884, 26214-26327, 26762-26911, 27091-27222, 28449-28521, 29235-29246, 29453-29708)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008291-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 61712 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:58414-58527, 60221-60313, 60973-61100, 61622-61712, 61932-62049, 63119-63191, 63880-63989, 64746-64894)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008296-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:131738-132163, 134540-134622, 136010-136166, 136526-136690, 136997-137005, 137077-137127, 138551-138771, 139206-139326)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008303-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c243209-243120, c242354-242247, c241517-241504, c240463-239596, c239452-239377, c239201-239064, c237070-236928, c236612-236514, c235741-235592)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008319-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 941007 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c943233-943138, c942947-942840, c942059-941905, c941285-941195, c941106-941007, c940789-940577, c940157-939907)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008380-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:991037-991177, 992280-992425, 993797-993872, 994297-994436, 995055-995171, 995946-995952, 996059-996253, 997178-997259, 997787-997976, 998181-998304)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008387-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:990847-990858, 991016-991177, 992280-992425, 993797-993872, 994297-994436, 995055-995171, 995946-995952, 996059-996253, 997178-997259, 997787-997976, 998181-998304)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008387-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:1335353-1335491, 1336501-1336574, 1336975-1337038, 1340223-1340425, 1341051-1341171, 1342151-1342312, 1342624-1342736, 1343556-1343612, 1343892-1344030, 1344866-1344972, 1345649-1345776, 1345895-1346027, 1346495-1346687, 1347001-1347077, 1348236-1348315, 1348540-1348675, 1351089-1351241, 1351726-1351853, 1351972-1352104, 1352574-1352766, 1353243-1353386, 1353855-1353943, 1354065-1354072, 1354349-1354512, 1356014-1356238, 1356528-1356745, 1357066-1357162, 1357418-1357680, 1358175-1358284, 1358538-1358722, 1358923-1359164, 1359400-1359879)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008418-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:1483624-1483780, 1483986-1484267, 1484548-1484670, 1485153-1485164, 1485468-1485488, 1486734-1486754, 1487063-1487091)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008432-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2570172 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:2545025-2545048, 2546023-2546242, 2548327-2548462, 2548693-2548780, 2549450-2549594, 2550553-2550782, 2552488-2552741, 2553740-2553850, 2556011-2556152, 2557610-2557710, 2558481-2558595, 2560563-2560646, 2561140-2561196, 2561733-2561849, 2562797-2562895, 2564419-2564617, 2564916-2565054, 2565893-2565992, 2566405-2566532, 2566873-2566971, 2567533-2567768, 2567932-2568058, 2568621-2568765, 2568995-2569129, 2569431-2569622, 2569998-2570172, 2571162-2571308, 2572557-2572624)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008514-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4596094 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:4593082-4593194, 4593964-4594093, 4594361-4594419, 4595031-4595136, 4595364-4595393, 4595844-4595891, 4595980-4596094, 4596314-4596385, 4596672-4596751, 4596907-4596985, 4597355-4597528, 4597672-4597757)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008690-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c4670511-4670508, c4669878-4669867, c4669027-4668862, c4668726-4668573, c4667924-4667759, c4667602-4667383, c4667282-4667153, c4666991-4666797, c4666681-4666550, c4666404-4666241, c4666139-4666013, c4665791-4665628, c4665427-4665307, c4665207-4665034, c4664777-4664667, c4664471-4664316)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008697-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4695392 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:4694816-4694974, 4695287-4695392, 4695547-4695689, 4695998-4696111, 4698078-4698129, 4698269-4698372, 4698458-4698466)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008700-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5027083 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c5028214-5028005, c5027916-5027800, c5027643-5027520, c5027365-5027279, c5027164-5027083, c5026993-5026728, c5026370-5026213, c5026005-5025903, c5025677-5025574)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008730-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6289649 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:6283044-6283116, 6283475-6283616, 6284441-6284565, 6285243-6285377, 6285489-6285534, 6285668-6285849, 6286015-6286294, 6286492-6286587, 6286935-6287109, 6287287-6287347, 6287516-6287600, 6287832-6287960, 6288727-6288799, 6289011-6289082, 6289561-6289649, 6290161-6290320, 6290600-6290733, 6290975-6291115, 6291264-6291384, 6291496-6291600, 6291870-6291966, 6292219-6292291, 6292557-6292656)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008856-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6945818 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:6940982-6941071, 6941773-6941901, 6942062-6942147, 6942455-6942539, 6942690-6942730, 6942914-6943010, 6943092-6943189, 6943406-6943510, 6943653-6943721, 6943899-6944025, 6944255-6944320, 6944428-6944487, 6944666-6944755, 6944964-6945070, 6945167-6945234, 6945421-6945574, 6945690-6945818, 6945914-6946082, 6946287-6946489, 6946689-6946881, 6946964-6947113, 6947198-6947372, 6947473-6947849, 6948178-6948336, 6948480-6948626, 6948900-6949028, 6949132-6949200)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008930-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7267830 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c7269954-7269886, c7268907-7268845, c7268648-7268543, c7268442-7268346, c7268145-7268000, c7267886-7267830, c7267666-7267512, c7267423-7267277, c7267168-7267097, c7266490-7266482)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008961-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7267666 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c7269954-7269886, c7268907-7268845, c7268648-7268543, c7268442-7268346, c7268145-7268000, c7267886-7267830, c7267666-7267512, c7267423-7267277, c7267168-7267097, c7266490-7266482)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008961-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7316046 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:7314019-7314048, 7315372-7315539, 7315689-7315772, 7315863-7316046, 7316165-7316808, 7317821-7317950, 7318140-7318203, 7318351-7318504, 7318607-7318745, 7320077-7320351)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008965-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7316046 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:7314026-7314048, 7315374-7315539, 7315689-7315772, 7315863-7316046, 7316165-7316808, 7317821-7317950, 7318140-7318203, 7318351-7318504, 7318607-7318745, 7320077-7320351)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_008965-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7720188 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c7731237-7731125, c7731012-7730839, c7730638-7730500, c7728541-7728465, c7728046-7727878, c7726849-7726694, c7726592-7726368, c7725745-7725524, c7725368-7725201, c7723825-7723652, c7722660-7722484, c7720388-7720188, c7719362-7719267, c7717981-7717843, c7717449-7717382, c7716107-7716029, c7715553-7715408)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009002-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7977023 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c7979773-7979716, c7978466-7978435, c7978259-7978080, c7977878-7977655, c7977473-7977376, c7977240-7977023, c7976920-7976701, c7976575-7976325, c7976144-7976070)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009017-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c8117067-8116225, c8115402-8115268, c8115159-8114985, c8114888-8114874, c8114594-8114503, c8114034-8113894, c8113650-8113351)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009033-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8412012 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:8411354-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413487)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009055-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8412012 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:8411354-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8414765-8414775)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009055-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8413452 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:8411354-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8414765-8414775)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009055-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8412012 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:8411354-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8413715-8413815)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009055-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8413452 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:8411354-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8413715-8413815)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009055-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8680775 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c8690762-8690721, c8690607-8690523, c8689125-8689003, c8688796-8688674, c8688519-8688382, c8688246-8688124, c8687987-8687865, c8687785-8687609, c8687418-8687290, c8687206-8687078, c8686308-8686180, c8686080-8685946, c8685833-8685699, c8684985-8684860, c8684233-8684102, c8683923-8683795, c8683670-8683539, c8683435-8683307, c8683158-8683030, c8682637-8682509, c8681827-8681699, c8681158-8681030, c8680906-8680775, c8680673-8680545, c8680426-8680298, c8680193-8680065, c8679978-8679850, c8679766-8679638, c8679533-8679405, c8679285-8679157, c8679070-8678994)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009087-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9051890 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c9064940-9064925, c9064229-9063999, c9063896-9063763, c9063028-9062915, c9062751-9062643, c9062528-9062425, c9062318-9062241, c9062027-9061848, c9061692-9061576, c9061452-9061360, c9060829-9060659, c9060560-9060415, c9059780-9059605, c9058678-9058563, c9058360-9058233, c9057334-9057234, c9057090-9056972, c9053799-9053713, c9053512-9053295, c9053047-9052890, c9052800-9052654, c9052243-9052224, c9052061-9051890, c9051735-9051613, c9051496-9050892)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009136-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9340425 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c9343110-9342980, c9342887-9342844, c9342597-9342466, c9342289-9342131, c9342037-9341792, c9341562-9341391, c9341273-9340988, c9340876-9340739, c9340578-9340425, c9340281-9340106)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009160-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:9595284-9595291, 9595537-9595826, 9597122-9597184, 9597734-9597850, 9598192-9598202, 9598974-9599051)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009187-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10130104 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:10129015-10129086, 10129773-10129902, 10130031-10130104, 10130237-10130338, 10130461-10130589, 10130735-10130857, 10130999-10131072, 10131163-10131352, 10131500-10131585, 10131717-10131833, 10132000-10132155, 10132316-10132385, 10132692-10132749, 10132845-10132987, 10133188-10133317, 10133667-10133692)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009240-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c10145003-10144970, c10144799-10144449, c10144315-10144237, c10144065-10144058, c10143638-10143494, c10142944-10142800, c10142700-10142628, c10142545-10142436, c10142306-10142109, c10141892-10141803)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009243-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c10188125-10187996, c10187906-10187775, c10187621-10187478, c10187372-10187261, c10187162-10186999, c10186907-10186760, c10186666-10186542, c10186453-10186352, c10186248-10186051, c10185942-10185872, c10185782-10185560, c10185231-10185116, c10184994-10184784, c10184690-10184568, c10184350-10184177, c10183976-10183845, c10183753-10183684, c10183263-10183252, c10183014-10182979, c10182383-10182155)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009251-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c10824482-10824133, c10824026-10823973, c10823836-10823729, c10823702-10823574, c10823277-10823170, c10823019-10823010, c10822932-10822731, c10822538-10822351, c10822197-10821955, c10821814-10821668)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009316-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10960876 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:10959206-10959314, 10959572-10959729, 10959941-10960047, 10960146-10960219, 10960323-10960459, 10960615-10960673, 10960767-10960876, 10960981-10961072, 10961160-10961292, 10961407-10961476, 10961581-10961681, 10961889-10961987, 10962073-10962092)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009334-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10960981 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:10959206-10959314, 10959572-10959729, 10959941-10960047, 10960146-10960219, 10960323-10960459, 10960615-10960673, 10960767-10960876, 10960981-10961072, 10961160-10961292, 10961407-10961476, 10961581-10961681, 10961889-10961987, 10962073-10962092)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009334-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11060445 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c11065261-11065142, c11064301-11064241, c11064121-11064003, c11063285-11063169, c11063073-11063015, c11062085-11062001, c11061829-11061759, c11060788-11060684, c11060588-11060445, c11060324-11060164, c11060024-11059954)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009345-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:11402382-11402440, 11403734-11403876, 11404409-11404422, 11405552-11405592, 11406080-11406156, 11407076-11407315, 11407830-11408066, 11408751-11408890, 11409098-11409262, 11409887-11410051, 11410334-11410540)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009373-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11448563 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:11447702-11447777, 11448475-11448563, 11448791-11448914, 11449016-11449168, 11449381-11449563, 11449736-11449854)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009381-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11552597 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:11552228-11552597, 11553060-11553488, 11554386-11554693)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009395-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12457025 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c12460078-12459942, c12459858-12459807, c12459606-12459417, c12459307-12459060, c12458894-12458841, c12458734-12458596, c12458505-12458365, c12458192-12458064, c12457963-12457790, c12457626-12457438, c12457228-12457025, c12456937-12456785, c12456696-12456574, c12456395-12456129, c12455953-12455816, c12455712-12455605, c12455474-12455322, c12455182-12454995)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009491-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12563751 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c12565711-12565642, c12564835-12564636, c12564468-12564319, c12564199-12564038, c12563870-12563751, c12563623-12563486, c12563375-12563202, c12563050-12562840, c12562669-12562585, c12562473-12562344, c12562190-12562011)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009510-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12979169 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:12977309-12977444, 12978837-12978956, 12979078-12979169, 12979275-12979419, 12979548-12979760, 12979871-12979992)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009548-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13087735 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c13093659-13093435, c13093321-13093152, c13092983-13092863, c13092752-13092675, c13092576-13092306, c13092138-13091793, c13091660-13091564, c13091478-13091359, c13091247-13091128, c13091028-13090900, c13090787-13090546, c13090403-13090255, c13090166-13090060, c13089965-13089867, c13089743-13089652, c13089549-13089408, c13089318-13089181, c13088852-13088762, c13088671-13088514, c13088149-13088006, c13087914-13087735, c13087593-13087500, c13087332-13087129, c13087034-13087000)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009563-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13317003 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c13320056-13319972, c13319818-13319641, c13319394-13319310, c13319142-13319082, c13318780-13318704, c13318599-13318453, c13318262-13318156, c13317410-13317322, c13317081-13317003, c13316698-13316548, c13316429-13316347, c13316251-13316221, c13316126-13316048, c13315957-13315820, c13315678-13315581, c13315291-13315166, c13314562-13314381, c13314081-13313991, c13313902-13313852, c13313670-13313583, c13313473-13313409, c13313268-13313214, c13312971-13312900, c13312809-13312691)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009591-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13316698 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c13320056-13319972, c13319818-13319641, c13319394-13319310, c13319142-13319082, c13318780-13318704, c13318599-13318453, c13318262-13318156, c13317410-13317322, c13317081-13317003, c13316698-13316548, c13316429-13316347, c13316251-13316221, c13316126-13316048, c13315957-13315820, c13315678-13315581, c13315291-13315166, c13314562-13314381, c13314081-13313991, c13313902-13313852, c13313670-13313583, c13313473-13313409, c13313268-13313214, c13312971-13312900, c13312809-13312691)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009591-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13881414 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:13878218-13878390, 13878518-13878584, 13878724-13879045, 13879178-13879362, 13879459-13879563, 13879658-13879816, 13879985-13880115, 13880234-13880411, 13880517-13880699, 13880929-13881005, 13881148-13881228, 13881334-13881414, 13881538-13881708, 13881872-13882322)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009643-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14253427 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c14253956-14253930, c14253534-14253427, c14253203-14253063, c14252967-14252836)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009690-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14568990 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c14569862-14569769, c14569606-14569510, c14569298-14569232, c14569064-14568990, c14568811-14568755, c14568652-14568531, c14568352-14568145, c14567977-14567831, c14567689-14567585, c14567450-14567321, c14567224-14567162, c14567070-14567006, c14566879-14566820)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009717-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c14853503-14853436, c14852429-14852420, c14851896-14851645, c14851463-14851344)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009771-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c>15316387-15316330, c15315996-15315905, c15313729-15313572, c15313102-15313023, c15312821-15312712, c15312143-15312097, c15311818-15311725, c15311395-15311345, c15311223-15311113, c15310828-15310748, c15310615-15310541)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009814-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15316387 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c>15316387-15316330, c15315996-15315905, c15313729-15313572, c15313102-15313023, c15312821-15312712, c15312143-15312097, c15311818-15311725, c15311395-15311345, c15311223-15311113, c15310828-15310748, c15310615-15310541)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009814-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15647028 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c15659901-15659810, c15657014-15656940, c15656813-15656728, c15655920-15655799, c15655552-15655466, c15654633-15654475, c15654319-15654221, c15653904-15653821, c15653713-15653567, c15653471-15653376, c15653256-15653212, c15653111-15652969, c15652753-15652654, c15652447-15652287, c15652133-15651992, c15651881-15651720, c15651568-15651396, c15651135-15651016, c15650930-15650739, c15650567-15650316, c15650197-15650053, c15649966-15649819, c15649628-15649435, c15649351-15649231, c15649154-15649100, c15649012-15648847, c15648678-15648526, c15648388-15648323, c15648025-15647906, c15647816-15647694, c15647565-15647365, c15647279-15647028, c15646907-15646782, c15646570-15646445, c15646351-15646231, c15646055-15645874, c15645654-15645506, c15645408-15645300, c15645160-15645067, c...] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009848-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15676106 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:15674349-15674378, 15674822-15675028, 15675619-15675725, 15675967-15676106, 15676283-15676380, 15677289-15677382, 15678315-15678406, 15678500-15678572, 15678647-15678705, 15678988-15679136, 15680147-15680328, 15680934-15681031, 15681286-15681366, 15683095-15683232, 15683373-15683445, 15683974-15684062)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009850-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15676283 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:15674349-15674378, 15674822-15675028, 15675619-15675725, 15675967-15676106, 15676283-15676380, 15677289-15677382, 15678315-15678406, 15678500-15678572, 15678647-15678705, 15678988-15679136, 15680147-15680328, 15680934-15681031, 15681286-15681366, 15683095-15683232, 15683373-15683445, 15683974-15684062)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009850-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:16445313-16445385, 16445803-16445810, 16446052-16446228)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009945-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16507780 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:16506455-16506493, 16506776-16506979, 16507114-16507208, 16507301-16507434, 16507631-16507780, 16507965-16508019, 16508109-16508192, 16508396-16508440, 16508547-16508609, 16508699-16508753)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_009955-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17036764 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:17036005-17036109, 17036358-17036467, 17036644-17036764, 17036890-17037031, 17037142-17037272, 17037448-17037584, 17037741-17037945, 17038194-17038238)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010013-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17330880 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:17327471-17327503, 17327783-17327807, 17329438-17329534, 17329926-17330049, 17330187-17330245, 17330539-17330658, 17330784-17330880, 17330988-17331073, 17331274-17331389, 17331627-17331748, 17331914-17332036, 17332296-17332483, 17333490-17333634, 17333822-17333965, 17334382-17334567, 17335056-17335139, 17335201-17335269, 17335414-17335528, 17335895-17336022, 17336260-17336354, 17336762-17336911, 17338208-17338310)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010055-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17881055 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c17881901-17881822, c17881368-17881055, c17880882-17880542, c17880153-17879803, c17879334-17878210)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010118-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17978761 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:17968239-17968268, 17968397-17968547, 17968763-17968881, 17969071-17969174, 17969346-17969538, 17969616-17969727, 17969871-17969955, 17970033-17970148, 17970273-17970343, 17970913-17971043, 17971309-17971376, 17971508-17971656, 17971890-17972027, 17972188-17972295, 17972337-17972414, 17972482-17972709, 17973372-17973442, 17973717-17973954, 17974090-17974218, 17974413-17974628, 17974821-17974988, 17975735-17975903, 17976160-17976292, 17976420-17976597, 17978663-17978761, 17978970-17979194)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010129-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17978761 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:17968239-17968268, 17968397-17968547, 17968763-17968881, 17969071-17969174, 17969346-17969538, 17969616-17969727, 17969871-17969955, 17970033-17970148, 17970273-17970343, 17970913-17971043, 17971309-17971376, 17971508-17971656, 17971890-17972027, 17972188-17972295, 17972337-17972414, 17972482-17972709, 17973372-17973442, 17973717-17973954, 17974090-17974218, 17974413-17974628, 17974821-17974988, 17975735-17975903, 17976160-17976292, 17978663-17978761, 17978970-17978973)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010129-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:18333488-18333566, 18334359-18334433, 18334812-18334825, 18334917-18334973, 18335382-18335440, 18336740-18336837, 18338633-18338762, 18339246-18339385, 18340639-18340749, 18341022-18341197, 18341630-18341773, 18341862-18342026, 18342244-18342396, 18342505-18342587, 18342691-18342838, 18342973-18343086, 18343923-18344000, 18344092-18344187, 18344424-18344530, 18344705-18344774, 18344889-18344981, 18345601-18345723, 18346061-18346234, 18346453-18346507, 18346967-18347100, 18349048-18349129, 18350141-18350355)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010172-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18563788 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c18567643-18567509, c18567315-18567145, c18567010-18566900, c18566751-18566647, c18566451-18566278, c18565925-18565832, c18565664-18565532, c18565429-18565276, c18564988-18564893, c18564781-18564641, c18564555-18564276, c18563951-18563788, c18563348-18563205)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010191-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c18721525-18721479, c18720697-18720643, c18720457-18720384, c18720167-18720109, c18719940-18719820, c18719731-18719601, c18719464-18719397, c18719278-18719136, c18718954-18718900, c18718525-18718465, c18717329-18717323, c18717248-18717077, c18716931-18716875)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010211-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c19035819-19035788, c19034944-19034697, c19031960-19031896, c19031566-19031504, c19029511-19029500, c19029107-19028997, c19028903-19028860, c19028737-19028676, c19028566-19028430, c19028237-19028064, c19026887-19026747, c19026597-19026445, c19025884-19025771)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010243-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c19178426-19178395, c19178139-19178129, c19177227-19177159, c19175886-19175824, c19175546-19175476)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010251-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c>19585578-19585546, c19585466-19585399, c19585278-19584910, c19583622-19583370)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010285-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 19585578 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:c>19585578-19585546, c19585466-19585399, c19585278-19584910, c19583622-19583370)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010285-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:<19601896-19602061, 19602783-19602898, 19604898-19605023, 19607797-19607932, 19608578->19608668)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010288-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 19601896 of lcl|scaffold_5 FEATURE: CDS: hypothetical protein [(lcl|scaffold_5:<19601896-19602061, 19602783-19602898, 19604898-19605023, 19607797-19607932, 19608578->19608668)] [lcl|scaffold_5: delta, dna len= 19661999] -> [gnl|ncbi|FUN_010288-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 61712 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:58183-58527, 60221-60313, 60973-61100, 61622-61712, 61932-62049, 63119-63191, 63880-63989, 64746-64894)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 188213 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:182363-182954, 183101-183229, 183312-183401, 183751-183828, 185280-185354, 185645-185813, 186187-186255, 187064-187093, 187985-188213, 188268-188823, 188863-189928, 189961-190400)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 188823 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:182363-182954, 183101-183229, 183312-183401, 183751-183828, 185280-185354, 185645-185813, 186187-186255, 187064-187093, 187985-188213, 188268-188823, 188863-189928, 189961-190400)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 188268 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:182363-182954, 183101-183229, 183312-183401, 183751-183828, 185280-185354, 185645-185813, 186187-186255, 187064-187093, 187985-188213, 188268-188823, 188863-189928, 189961-190400)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 420640 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c426503-426482, c426118-426032, c424187-424058, c423375-423315, c423061-420640, c420595-420562, c420429-420058)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 420562 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c426503-426482, c426118-426032, c424187-424058, c423375-423315, c423061-420640, c420595-420562, c420429-420058)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 420595 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c426503-426482, c426118-426032, c424187-424058, c423375-423315, c423061-420640, c420595-420562, c420429-420058)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 420429 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c426503-426482, c426118-426032, c424187-424058, c423375-423315, c423061-420640, c420595-420562, c420429-420058)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 941007 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c943233-943138, c942947-942840, c942059-941905, c941285-941195, c941106-941007, c940789-940577, c940157-939907)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2570172 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:2545025-2545048, 2546023-2546242, 2548327-2548462, 2548693-2548780, 2549450-2549594, 2550553-2550782, 2552488-2552741, 2553740-2553850, 2556011-2556152, 2557610-2557710, 2558481-2558595, 2560563-2560646, 2561140-2561196, 2561733-2561849, 2562797-2562895, 2564419-2564617, 2564916-2565054, 2565893-2565992, 2566405-2566532, 2566873-2566971, 2567533-2567768, 2567932-2568058, 2568621-2568765, 2568995-2569129, 2569431-2569622, 2569998-2570172, 2571162-2571308, 2572557-2573886)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3882521 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:3882445-3882521, 3882544-3882616, 3884342-3884389, 3885383-3885484, 3887993-3888165, 3889051-3889163, 3889272-3889341, 3889478-3889555, 3890307-3890450, 3891788-3891936, 3892157-3892328, 3892420-3892470, 3892779-3892860, 3892974-3893219, 3893445-3893857)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3882544 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:3882445-3882521, 3882544-3882616, 3884342-3884389, 3885383-3885484, 3887993-3888165, 3889051-3889163, 3889272-3889341, 3889478-3889555, 3890307-3890450, 3891788-3891936, 3892157-3892328, 3892420-3892470, 3892779-3892860, 3892974-3893219, 3893445-3893857)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4596094 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:4592733-4593194, 4593964-4594093, 4594361-4594419, 4595031-4595136, 4595364-4595393, 4595844-4595891, 4595980-4596094, 4596314-4596385, 4596672-4596751, 4596907-4596985, 4597355-4597528, 4597672-4598267)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4695392 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:4694545-4694974, 4695287-4695392, 4695547-4695689, 4695998-4696111, 4698078-4698129, 4698269-4698372, 4698458-4698597)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5027083 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c5028724-5028630, c5028246-5028005, c5027916-5027800, c5027643-5027520, c5027365-5027279, c5027164-5027083, c5026993-5026728, c5026370-5026213, c5026005-5025903, c5025677-5025184)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6289649 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:6280978-6281101, 6283021-6283116, 6283475-6283616, 6284441-6284565, 6285243-6285377, 6285489-6285534, 6285668-6285849, 6286015-6286294, 6286492-6286587, 6286935-6287109, 6287287-6287347, 6287516-6287600, 6287832-6287960, 6288727-6288799, 6289011-6289082, 6289561-6289649, 6290161-6290320, 6290600-6290733, 6290975-6291115, 6291264-6291384, 6291496-6291600, 6291870-6291966, 6292219-6292291, 6292557-6294269)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6945818 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:6940451-6940512, 6940958-6941071, 6941773-6941901, 6942062-6942147, 6942455-6942539, 6942690-6942730, 6942914-6943010, 6943092-6943189, 6943406-6943510, 6943653-6943721, 6943899-6944025, 6944255-6944320, 6944428-6944487, 6944666-6944755, 6944964-6945070, 6945167-6945234, 6945421-6945574, 6945690-6945818, 6945914-6946082, 6946287-6946489, 6946689-6946881, 6946964-6947113, 6947198-6947372, 6947473-6947849, 6948178-6948336, 6948480-6948626, 6948900-6949028, 6949132-6950233)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7267830 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c7269954-7269886, c7268907-7268845, c7268648-7268543, c7268442-7268346, c7268145-7268000, c7267886-7267830, c7267666-7267512, c7267423-7267277, c7267168-7267097, c7266490-7265825)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7267666 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c7269954-7269886, c7268907-7268845, c7268648-7268543, c7268442-7268346, c7268145-7268000, c7267886-7267830, c7267666-7267512, c7267423-7267277, c7267168-7267097, c7266490-7265825)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7316046 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:7313975-7314048, 7315372-7315539, 7315689-7315772, 7315863-7316046, 7316165-7316808, 7317821-7317950, 7318140-7318203, 7318351-7318504, 7318607-7318745, 7320077-7320399, 7320452-7320648)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7316046 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:7313975-7314048, 7315374-7315539, 7315689-7315772, 7315863-7316046, 7316165-7316808, 7317821-7317950, 7318140-7318203, 7318351-7318504, 7318607-7318745, 7320077-7320351)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7720188 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c7731237-7731125, c7731012-7730839, c7730638-7730500, c7728541-7728465, c7728046-7727878, c7726849-7726694, c7726592-7726368, c7725745-7725524, c7725368-7725201, c7723825-7723652, c7722660-7722484, c7720388-7720188, c7719362-7719267, c7717981-7717843, c7717449-7717382, c7716107-7716029, c7715553-7715408)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7977023 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c7980265-7980130, c7979782-7979716, c7978466-7978435, c7978259-7978080, c7977878-7977655, c7977473-7977376, c7977240-7977023, c7976920-7976701, c7976575-7976325, c7976144-7975698)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8412012 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:8409630-8409689, 8411353-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8415293)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8412012 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:8409630-8409689, 8411353-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8414765-8415293)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8413452 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:8409630-8409689, 8411353-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8414765-8415293)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8412012 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:8409630-8409689, 8411353-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8413715-8415293)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8413452 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:8409630-8409689, 8411353-8411434, 8411598-8411702, 8411913-8412012, 8412474-8412552, 8413060-8413195, 8413398-8413452, 8413715-8415293)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8680775 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c8690762-8690721, c8690607-8690523, c8689125-8689003, c8688796-8688674, c8688519-8688382, c8688246-8688124, c8687987-8687865, c8687785-8687609, c8687418-8687290, c8687206-8687078, c8686308-8686180, c8686080-8685946, c8685833-8685699, c8684985-8684860, c8684233-8684102, c8683923-8683795, c8683670-8683539, c8683435-8683307, c8683158-8683030, c8682637-8682509, c8681827-8681699, c8681158-8681030, c8680906-8680775, c8680673-8680545, c8680426-8680298, c8680193-8680065, c8679978-8679850, c8679766-8679638, c8679533-8679405, c8679285-8679157, c8679070-8678508)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9051890 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c9064940-9064925, c9064229-9063999, c9063896-9063763, c9063028-9062915, c9062751-9062643, c9062528-9062425, c9062318-9062241, c9062027-9061848, c9061692-9061576, c9061452-9061360, c9060829-9060659, c9060560-9060415, c9059780-9059605, c9058678-9058563, c9058360-9058233, c9057334-9057234, c9057090-9056972, c9053799-9053713, c9053512-9053295, c9053047-9052890, c9052800-9052654, c9052243-9052224, c9052061-9051890, c9051735-9051613, c9051496-9050892)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9340425 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c9343110-9342980, c9342887-9342844, c9342597-9342466, c9342289-9342131, c9342037-9341792, c9341562-9341391, c9341273-9340988, c9340876-9340739, c9340578-9340425, c9340281-9339653)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10130104 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:10128971-10129086, 10129773-10129902, 10130031-10130104, 10130237-10130338, 10130461-10130589, 10130735-10130857, 10130999-10131072, 10131163-10131352, 10131500-10131585, 10131717-10131833, 10132000-10132155, 10132316-10132385, 10132692-10132749, 10132845-10132987, 10133188-10133317, 10133667-10134145)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10815621 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:10815577-10815621, 10815840-10815969, 10816141-10816268, 10816569-10816627, 10816744-10816835, 10816951-10816997, 10817107-10817205, 10817403-10817546, 10817661-10817781, 10817975-10818099, 10818224-10818284, 10818372-10818462, 10818595-10818688, 10818804-10818871, 10818968-10819049, 10819167-10819251, 10819461-10819627)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10960876 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:10959206-10959314, 10959572-10959729, 10959941-10960047, 10960146-10960219, 10960323-10960459, 10960615-10960673, 10960767-10960876, 10960981-10961072, 10961160-10961292, 10961407-10961476, 10961581-10961681, 10961889-10961987, 10962073-10962132)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10960981 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:10959206-10959314, 10959572-10959729, 10959941-10960047, 10960146-10960219, 10960323-10960459, 10960615-10960673, 10960767-10960876, 10960981-10961072, 10961160-10961292, 10961407-10961476, 10961581-10961681, 10961889-10961987, 10962073-10962132)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11060445 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c11065261-11065142, c11064301-11064241, c11064121-11064003, c11063285-11063169, c11063073-11063015, c11062085-11062001, c11061829-11061759, c11060788-11060684, c11060588-11060445, c11060324-11060164, c11060024-11059954)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11448563 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:11447702-11447777, 11448475-11448563, 11448791-11448914, 11449016-11449168, 11449381-11449563, 11449736-11450044)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11552597 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:11551864-11552597, 11553060-11553488, 11554386-11555944)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12457025 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c12460078-12459942, c12459858-12459807, c12459606-12459417, c12459307-12459060, c12458894-12458841, c12458734-12458596, c12458505-12458365, c12458192-12458064, c12457963-12457790, c12457626-12457438, c12457228-12457025, c12456937-12456785, c12456696-12456574, c12456395-12456129, c12455953-12455816, c12455712-12455605, c12455474-12455322, c12455182-12454865)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12563751 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c12566117-12566083, c12565979-12565883, c12565758-12565642, c12564835-12564636, c12564468-12564319, c12564199-12564038, c12563870-12563751, c12563623-12563486, c12563375-12563202, c12563050-12562840, c12562669-12562585, c12562473-12562344, c12562190-12561489)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12979169 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:12977309-12977444, 12978837-12978956, 12979078-12979169, 12979275-12979419, 12979548-12979760, 12979871-12979992)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13087735 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c13093659-13093435, c13093321-13093152, c13092983-13092863, c13092752-13092675, c13092576-13092306, c13092138-13091793, c13091660-13091564, c13091478-13091359, c13091247-13091128, c13091028-13090900, c13090787-13090546, c13090403-13090255, c13090166-13090060, c13089965-13089867, c13089743-13089652, c13089549-13089408, c13089318-13089181, c13088852-13088762, c13088671-13088514, c13088149-13088006, c13087914-13087735, c13087593-13087500, c13087332-13087129, c13087034-13086701)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13317003 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c13320309-13320200, c13320093-13319972, c13319818-13319641, c13319394-13319310, c13319142-13319082, c13318780-13318704, c13318599-13318453, c13318262-13318156, c13317410-13317322, c13317081-13317003, c13316698-13316548, c13316429-13316347, c13316251-13316221, c13316126-13316048, c13315957-13315820, c13315678-13315581, c13315291-13315166, c13314562-13314381, c13314081-13313991, c13313902-13313852, c13313670-13313583, c13313473-13313409, c13313268-13313214, c13312971-13312900, c13312809-13311826)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13316698 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c13320309-13320200, c13320093-13319972, c13319818-13319641, c13319394-13319310, c13319142-13319082, c13318780-13318704, c13318599-13318453, c13318262-13318156, c13317410-13317322, c13317081-13317003, c13316698-13316548, c13316429-13316347, c13316251-13316221, c13316126-13316048, c13315957-13315820, c13315678-13315581, c13315291-13315166, c13314562-13314381, c13314081-13313991, c13313902-13313852, c13313670-13313583, c13313473-13313409, c13313268-13313214, c13312971-13312900, c13312809-13311826)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13881414 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:13877723-13877986, 13878213-13878390, 13878518-13878584, 13878724-13879045, 13879178-13879362, 13879459-13879563, 13879658-13879816, 13879985-13880115, 13880234-13880411, 13880517-13880699, 13880929-13881005, 13881148-13881228, 13881334-13881414, 13881538-13881708, 13881872-13883551)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13881414 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:13878066-13878390, 13878518-13878584, 13878724-13879045, 13879178-13879362, 13879459-13879563, 13879658-13879816, 13879985-13880115, 13880234-13880411, 13880517-13880699, 13880929-13881005, 13881148-13881414, 13881538-13881708, 13881872-13883551)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14253427 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c14253972-14253930, c14253534-14253427, c14253203-14253063, c14252967-14252673)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14568990 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c14570244-14569769, c14569606-14569510, c14569298-14569232, c14569064-14568990, c14568811-14568755, c14568652-14568531, c14568352-14568145, c14567977-14567831, c14567689-14567585, c14567450-14567321, c14567224-14567162, c14567070-14567006, c14566879-14565986)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c>15316388-15316330, c15315996-15315905, c15313729-15313572, c15313102-15313023, c15312821-15312712, c15312143-15312097, c15311818-15311725, c15311395-15311345, c15311223-15311113, c15310828-15310748, c15310615-15310530, c15310323-15309255)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15647028 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c15659901-15659810, c15657014-15656940, c15656813-15656728, c15655920-15655799, c15655552-15655466, c15654633-15654475, c15654319-15654221, c15653904-15653821, c15653713-15653567, c15653471-15653376, c15653256-15653212, c15653111-15652969, c15652753-15652654, c15652447-15652287, c15652133-15651992, c15651881-15651720, c15651568-15651396, c15651135-15651016, c15650930-15650739, c15650567-15650316, c15650197-15650053, c15649966-15649819, c15649628-15649435, c15649351-15649231, c15649154-15649100, c15649012-15648847, c15648678-15648526, c15648388-15648323, c15648025-15647906, c15647816-15647694, c15647565-15647365, c15647279-15647028, c15646907-15646782, c15646570-15646445, c15646351-15646231, c15646055-15645874, c15645654-15645506, c15645408-15645300, c15645160-15645067, c...] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 15676106 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:15674241-15674378, 15674822-15675028, 15675619-15675725, 15675967-15676106, 15676283-15676380, 15677289-15677382, 15678315-15678406, 15678500-15678572, 15678647-15678705, 15678988-15679136, 15680147-15680328, 15680934-15681031, 15681286-15681366, 15683095-15683232, 15683373-15683445, 15683974-15684131)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 15676283 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:15674241-15674378, 15674822-15675028, 15675619-15675725, 15675967-15676106, 15676283-15676380, 15677289-15677382, 15678315-15678406, 15678500-15678572, 15678647-15678705, 15678988-15679136, 15680147-15680328, 15680934-15681031, 15681286-15681366, 15683095-15683232, 15683373-15683445, 15683974-15684131)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16152170 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:16151894-16152170, 16152308-16152385, 16152588-16152756, 16152889-16153051, 16153419-16153481, 16153609-16153737, 16153868-16153996, 16154377-16154598, 16154722-16154823, 16154917-16155114, 16155363-16155447, 16155708-16155735, 16155862-16155958, 16156121-16156181, 16156287-16156364, 16156724-16156852, 16157610-16157715, 16158039-16158266, 16158353-16158583, 16158804-16158852, 16159039-16159879)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 16246187 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:16226856-16227122, 16227342-16227514, 16228444-16228664, 16229471-16229781, 16229834-16229922, 16230106-16230325, 16230567-16230879, 16231151-16231269, 16231443-16231649, 16231988-16235596, 16235994-16236037, 16236161-16236293, 16236409-16236525, 16236612-16236713, 16236849-16236897, 16237703-16237852, 16237948-16238858, 16239129-16240595, 16240890-16241007, 16242983-16243065, 16243168-16243517, 16243721-16243956, 16244321-16244416, 16244534-16244715, 16244992-16246187, 16246208-16248431)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16246208 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:16226856-16227122, 16227342-16227514, 16228444-16228664, 16229471-16229781, 16229834-16229922, 16230106-16230325, 16230567-16230879, 16231151-16231269, 16231443-16231649, 16231988-16235596, 16235994-16236037, 16236161-16236293, 16236409-16236525, 16236612-16236713, 16236849-16236897, 16237703-16237852, 16237948-16238858, 16239129-16240595, 16240890-16241007, 16242983-16243065, 16243168-16243517, 16243721-16243956, 16244321-16244416, 16244534-16244715, 16244992-16246187, 16246208-16248431)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16507780 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:16506455-16506493, 16506776-16506979, 16507114-16507208, 16507301-16507434, 16507631-16507780, 16507965-16508019, 16508109-16508192, 16508396-16508440, 16508547-16508609, 16508699-16508753)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17023109 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:17023014-17023109, 17023883-17023960, 17024122-17024674, 17024805-17024975, 17025109-17025178, 17026978-17027051, 17028125-17028211, 17028364-17028424, 17028530-17028688, 17028777-17028937, 17029620-17029717, 17030191-17030278, 17030591-17030798, 17030888-17030991, 17031069-17031153, 17031553-17031644, 17031927-17032121, 17032402-17032617, 17032725-17032787, 17032988-17033191, 17033512-17033556, 17033742-17033821, 17034219-17035000)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17036764 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:17036005-17036109, 17036358-17036467, 17036644-17036764, 17036890-17037031, 17037142-17037272, 17037448-17037584, 17037741-17037945, 17038194-17038294)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17330880 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:17327471-17327503, 17327783-17327807, 17329438-17329534, 17329926-17330049, 17330187-17330245, 17330539-17330658, 17330784-17330880, 17330988-17331073, 17331274-17331389, 17331627-17331748, 17331914-17332036, 17332296-17332483, 17333490-17333634, 17333822-17333965, 17334382-17334567, 17335056-17335139, 17335201-17335269, 17335414-17335528, 17335895-17336022, 17336260-17336354, 17336762-17336911, 17338208-17338391)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17881055 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c17881901-17881822, c17881368-17881055, c17880882-17880542, c17880153-17879803, c17879334-17877714)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17978761 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:17968239-17968268, 17968397-17968547, 17968763-17968881, 17969071-17969174, 17969346-17969538, 17969616-17969727, 17969871-17969955, 17970033-17970148, 17970273-17970343, 17970913-17971043, 17971309-17971376, 17971508-17971656, 17971890-17972027, 17972188-17972295, 17972337-17972414, 17972482-17972709, 17973372-17973442, 17973717-17973954, 17974090-17974218, 17974413-17974628, 17974821-17974988, 17975735-17975903, 17976160-17976292, 17976420-17976597, 17978663-17978761, 17978970-17979264)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 17978761 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:17968239-17968268, 17968397-17968547, 17968763-17968881, 17969071-17969174, 17969346-17969538, 17969616-17969727, 17969871-17969955, 17970033-17970148, 17970273-17970343, 17970913-17971043, 17971309-17971376, 17971508-17971656, 17971890-17972027, 17972188-17972295, 17972337-17972414, 17972482-17972709, 17973372-17973442, 17973717-17973954, 17974090-17974218, 17974413-17974628, 17974821-17974988, 17975735-17975903, 17976160-17976292, 17978663-17978761, 17978970-17979264)] [lcl|scaffold_5: delta, dna len= 19661999]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 18563788 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c18567752-18567509, c18567315-18567145, c18567010-18566900, c18566751-18566647, c18566451-18566278, c18565925-18565832, c18565664-18565532, c18565429-18565276, c18564988-18564893, c18564781-18564641, c18564555-18564276, c18563951-18563788, c18563348-18562866)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c>19585579-19585546, c19585466-19585399, c19585278-19584910, c19583622-19583151)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 19585579 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:c>19585579-19585546, c19585466-19585399, c19585278-19584910, c19583622-19583151)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:<19601895-19602061, 19602783-19602898, 19604898-19605023, 19607797-19607932, 19608578->19608668)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 19601895 of lcl|scaffold_5 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_5:<19601895-19602061, 19602783-19602898, 19604898-19605023, 19607797-19607932, 19608578->19608668)] [lcl|scaffold_5: delta, dna len= 19661999]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:<1199-1378, 2280-2486, 2901-3083, 4575-4658, 4887-4919)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017724-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1199 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:<1199-1378, 2280-2486, 2901-3083, 4575-4658, 4887-4919)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017724-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:<1199-1378, 2280-2486, 2901-3083, 4575-4703)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017724-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1199 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:<1199-1378, 2280-2486, 2901-3083, 4575-4703)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017724-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 337693 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c338045-337937, c337799-337693, c337484-337426, c337327-337186, c337083-336994, c334926-334819, c334711-334624, c334299-334163, c333762-333544, c331571-331458, c328199-327975, c326878-326782, c326618-326527, c326049-325825)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017747-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 920400 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:908297-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922304, 922682-922779, 922919-923047, 923259-923409)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017808-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 920649 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:908297-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922304, 922682-922779, 922919-923047, 923259-923409)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017808-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 920400 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:907393-907536, 907895-908036, 908289-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922403)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017808-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 920649 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:907393-907536, 907895-908036, 908289-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922403)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017808-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 930068 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:929936-930068, 930233-930411, 930526-930654, 930808-930957, 931153-931392, 931647-932022, 932335-932597)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_046234-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 950875 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:948663-948695, 949039-949197, 949467-949542, 949621-949668, 949797-949852, 949997-950059, 950154-950175, 950326-950454, 950759-950875, 951295-951421, 951507-951552)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017812-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 999397 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c1001662-1000541, c1000247-1000113, c999896-999777, c999489-999397, c999174-999097, c998996-998856, c998766-998596, c998442-998332, c998164-998027, c997831-997652, c997566-997372, c997272-997081, c996839-996707, c996480-996341, c996144-996028, c995929-995783, c995624-995503, c995335-995196, c992495-992355, c992098-991983, c991339-991178, c990686-990585, c990390-990275, c990136-989692, c989599-987976, c987376-987263, c986770-986622, c986390-986029, c985810-985578, c985218-985167, c982809-982619, c980017-979667, c979468-979343, c979068-978952, c978823-978634, c977196-977034, c976944-976827, c976768-976506, c976416-976258, c976034-975896, c975560-975514, c975362-975308, c974801-974647)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017815-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:1142981-1143004, 1144148-1144263, 1147310-1147366, 1147542-1147689, 1149496-1149690, 1149783-1149796, 1149874-1150063)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017831-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:1161318-1161428, 1161624-1161770, 1163009-1163203, 1165192-1165380, 1167539-1167679, 1168063-1168155, 1170526-1170540, 1172810-1172919, 1173269-1173401, 1173555-1173682, 1173806-1173951, 1174181-1174339, 1175351-1175367)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017833-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1484218 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:1483844-1483888, 1483975-1484053, 1484173-1484218, 1484325-1484422, 1484841-1484966, 1485093-1485181, 1485303-1485391, 1485520-1485580, 1485680-1485865, 1486065-1486145, 1486507-1486655, 1486806-1486946, 1487086-1487185, 1487416-1487614, 1487798-1487874, 1488196-1488334, 1488443-1488628, 1488936-1489051, 1489197-1489262, 1489369-1489497)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017855-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1629440 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c1630512-1630438, c1629508-1629440, c1629204-1629091, c1628970-1628769, c1628163-1628110, c1627160-1627114)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017867-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:<1928924-1929009, 1929112-1929160, 1929314-1929463, 1932431-1932607, 1932933-1933016, 1933677-1933763, 1934021-1934118, 1935130-1935227, 1935804-1935899, 1937045-1937154)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017895-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1928924 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:<1928924-1929009, 1929112-1929160, 1929314-1929463, 1932431-1932607, 1932933-1933016, 1933677-1933763, 1934021-1934118, 1935130-1935227, 1935804-1935899, 1937045-1937154)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017895-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2649526 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c2658586-2658506, c2658340-2658287, c2658140-2658078, c2657930-2657793, c2657597-2657495, c2657133-2657064, c2656879-2656766, c2656511-2656433, c2655622-2655076, c2654894-2654745, c2654602-2654490, c2653527-2653355, c2653046-2652952, c2652127-2652094, c2651975-2651930, c2651755-2651575, c2651349-2651223, c2650779-2650610, c2650435-2650354, c2650013-2649905, c2649795-2649693, c2649594-2649526, c2649372-2649215)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017952-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2672103 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c2672105-2672103, c2671945-2671885, c2671662-2671535, c2671444-2671362, c2671213-2671022, c2670811-2670739, c2670619-2670457, c2670295-2670214, c2670030-2669964)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017956-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3025351 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:3018410-3021817, 3021952-3022100, 3022578-3022669, 3022756-3022969, 3023115-3023304, 3023504-3023687, 3023920-3024062, 3024518-3024579, 3024863-3025001, 3025109-3025351, 3025480-3025577, 3025920-3026001, 3026151-3026268, 3026367-3026478, 3026603-3026708, 3026843-3026983, 3027531-3027644, 3027819-3028020, 3028135-3028592, 3028684-3028731, 3028827-3028994, 3029453-3029554, 3029739-3029795, 3029957-3030080, 3030178-3030321, 3030807-3030898, 3031019-3031090, 3032347-3032415, 3032711-3032932)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_017994-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3159011 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:3154202-3154218, 3154988-3155099, 3155249-3155421, 3155767-3155909, 3156020-3156150, 3156268-3156399, 3156606-3156708, 3156849-3156982, 3157235-3157370, 3157460-3157572, 3157665-3157829, 3157939-3158061, 3158274-3158486, 3158703-3159011, 3159461-3159616, 3159863-3160017, 3160232-3160337)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018014-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c>3175909-3175764, c3175353-3175160, c3174842-3174653, c3174519-3174391, c3174201-3174072, c3173912-3173841, c3173555-3173408, c3172012-3171878, c3171783-3171734, c3171585-3171328)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018018-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3175909 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c>3175909-3175764, c3175353-3175160, c3174842-3174653, c3174519-3174391, c3174201-3174072, c3173912-3173841, c3173555-3173408, c3172012-3171878, c3171783-3171734, c3171585-3171328)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018018-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3286036 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c3291610-3291561, c3289298-3289226, c3289111-3288998, c3288866-3288738, c3288442-3288132, c3287873-3287820, c3287429-3287390, c3286817-3286802, c3286576-3286544, c3286393-3286326, c3286205-3286036, c3285614-3285584)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018033-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3506991 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:3498815-3498868, 3500413-3500526, 3501412-3501486, 3501656-3501781, 3502017-3502160, 3502274-3502315, 3502591-3502719, 3505457-3505549, 3505983-3506093, 3506908-3506991, 3507880-3507951, 3508672-3508869, 3508967-3509089)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018066-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4217205 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c4217255-4217205, c4216524-4216361, c4215199-4215034, c4214569-4214432)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018139-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4278174 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c4278767-4278637, c4278245-4278174, c4277446-4277375, c4277094-4277013, c4276871-4276767, c4276657-4276589, c4275840-4275760, c4275666-4275606, c4275463-4275368, c4275084-4275015, c4274563-4274485, c4273454-4273272, c4273219-4273124, c4273021-4272848, c4272755-4272675, c4271074-4271036)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018149-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c4532988-4532904, c4531167-4531041, c4530916-4530765, c4530331-4530204, c4530079-4529938, c4529672-4529548, c4528871-4528712, c4527636-4527630, c4526099-4525836, c4525457-4525300, c4524981-4524958, c4524825-4524737, c4522761-4522602, c4522522-4522330, c4522213-4522022, c4520063-4519915, c4519222-4518513)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018178-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4733380 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c4733840-4733740, c4733588-4733380, c4733287-4733203, c4733111-4732895, c4732741-4732678, c4732595-4732492)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018199-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5235688 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:5227043-5227184, 5227993-5228113, 5228844-5228953, 5229718-5229806, 5230059-5230173, 5230652-5230779, 5231104-5231252, 5231424-5231574, 5231950-5232124, 5232333-5232406, 5232641-5232785, 5233272-5233414, 5233573-5233716, 5233848-5234099, 5234312-5234442, 5235259-5235422, 5235549-5235688, 5236105-5236221, 5237147-5237223, 5237636-5237762, 5238098-5238181, 5238288-5238364, 5238569-5238655, 5238739-5238844, 5238988-5239104, 5239192-5239296, 5239386-5239493, 5239738-5239827, 5239928-5240041, 5240188-5240244)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018266-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5813454 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:5811314-5811414, 5811566-5811774, 5811888-5812034, 5812210-5812333, 5813072-5813187, 5813349-5813454, 5814116-5814203)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018321-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6017737 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c6021188-6021089, c6019741-6019653, c6019433-6019243, c6017830-6017737, c6017640-6017547, c6016373-6016273, c6016032-6015940, c6015756-6015624, c6015077-6014989, c6014516-6014367, c6013830-6013732, c6013287-6013186)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018340-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:6182843-6182945, 6183199-6183206, 6184173-6184248, 6184957-6185060, 6186039-6186137)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018358-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c6349335-6349261, c6348251-6348239, c6348038-6347856, c6346615-6346491, c6343937-6343874, c6343498-6343421, c6342717-6342689)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018376-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:6643710-6643763, 6644099-6644112, 6645042-6645136, 6652713-6652807)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018416-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:6899164-6899209, 6901750-6901784, 6901969-6902004, 6902184-6902190, 6902960-6903268, 6903383-6903480, 6905384-6905497, 6905631-6905852, 6905972-6906069, 6906736-6906850, 6907651-6907758, 6908195-6908305, 6908460-6908599, 6908691-6908742)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018438-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:7139099-7139143, 7139264-7139278, 7139364-7139492, 7139677-7139805, 7140211-7140285, 7140541-7140621)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018462-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c7148975-7148950, c7148765-7148758, c7148586-7148489, c7147875-7147633)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018465-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:7160924-7160998, 7161275-7161337, 7162424-7162438, 7162569-7162625, 7162770-7162814, 7162907-7163137)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018469-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8341528 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c8346673-8346626, c8345946-8345771, c8345660-8345510, c8345394-8345334, c8345016-8344922, c8344710-8344530, c8344265-8344207, c8344075-8343954, c8343562-8343522, c8343427-8343315, c8343137-8343063, c8342953-8342864, c8342709-8342596, c8342049-8341918, c8341773-8341528, c8341406-8341161)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018563-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8348174 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:8347183-8347465, 8347548-8347758, 8348045-8348174, 8348390-8348464, 8348732-8348848)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018564-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8491161 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c8491259-8491161, c8490365-8490183, c8489837-8489649, c8489263-8489087, c8488825-8488684, c8488433-8488195, c8487913-8487908)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018584-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8644129 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:8637511-8637534, 8637742-8637828, 8638100-8638242, 8640193-8640329, 8640510-8640603, 8640749-8640918, 8641485-8641574, 8641883-8642025, 8642599-8642785, 8643631-8643799, 8643973-8644129, 8644258-8644341, 8644477-8644614, 8645062-8645298, 8645662-8645733, 8645876-8645899)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018595-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8777499 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:8775171-8775236, 8775503-8775591, 8776021-8776108, 8776296-8776373, 8776560-8776647, 8776966-8777050, 8777358-8777499, 8777707-8777799, 8778161-8778277, 8778385-8778595, 8778723-8779033)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018602-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9470074 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:9465029-9465061, 9465396-9465586, 9465714-9465751, 9465944-9466033, 9466192-9466400, 9469036-9469173, 9469406-9469543, 9469943-9470074, 9470643-9470699)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018679-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9664233 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c9668260-9668152, c9667789-9667754, c9667376-9667325, c9667102-9666780, c9666547-9666332, c9665989-9665751, c9664394-9664233, c9664020-9663862, c9663725-9663590, c9663483-9663344, c9663129-9663030, c9662830-9662685, c9662466-9662263)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018698-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9846524 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c9849548-9849512, c9849386-9849313, c9849148-9849093, c9849000-9848928, c9848804-9848749, c9848673-9848544, c9848455-9848333, c9848203-9848138, c9847578-9847508, c9847370-9847280, c9847186-9847095, c9846955-9846778, c9846622-9846524, c9846011-9845940, c9845832-9845758, c9845653-9845511, c9845266-9845074, c9844963-9844767, c9844559-9844481, c9844312-9844217, c9844062-9844000)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018713-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10297010-10296927, c10296422-10296374, c10295884-10295873, c10294516-10293996)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018739-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10324703 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10325004-10324703, c10324674-10324548)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018742-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10324674 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10325004-10324703, c10324674-10324548)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018742-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10611119 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:10596646-10597591, 10598833-10598885, 10599440-10599515, 10601457-10601686, 10601783-10601920, 10602451-10602522, 10603456-10603541, 10604088-10604148, 10605329-10605475, 10606216-10606343, 10609490-10609604, 10610334-10610421, 10610622-10610702, 10611004-10611119, 10611587-10611766, 10612649-10612819)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018779-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10645930 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10647683-10647530, c10647295-10647098, c10646598-10646434, c10646112-10645930, c10645811-10645681, c10644884-10644726, c10644381-10644078, c10643834-10643703, c10643487-10643156, c10642961-10642769, c10642572-10642468, c10642036-10641909, c10641554-10641420, c10641141-10641015, c10640812-10640625, c10640425-10640279, c10640095-10639517)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018783-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10695063-10695033, c10694693-10694652, c10694424-10694302, c10694021-10693977, c10693869-10693790, c10693580-10693481, c10693339-10693256, c10689346-10689140, c10688068-10688022, c10687985-10687971, c10686692-10686547, c10686045-10685895)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018786-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10831987 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10833058-10832950, c10832196-10831987, c10831589-10831408)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018799-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10831987 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c10833058-10832950, c10832196-10831987, c10831589-10831412, c10829236-10829188)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018799-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11080320 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:11080238-11080320, 11080569-11080605, 11081039-11081244, 11081734-11081808, 11081915-11082008, 11082162-11082274, 11082592-11082691, 11082917-11083088, 11083203-11083513)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_046236-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11080320 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:11079972-11080088, 11080190-11080320, 11080569-11080605, 11081039-11081244, 11081734-11081808, 11081915-11082008, 11082162-11082274, 11082592-11082691, 11082917-11083088, 11083203-11083513)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_046236-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:11580742-11580774, 11580910-11580921, 11581491-11581619, 11582028-11582169, 11582600-11582685, 11583019-11583066, 11583179-11583248, 11583333-11583391, 11583537-11583620)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018863-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:12405339-12405414, 12405639-12405707, 12405924-12405934, 12406364-12406506, 12407445-12407518, 12408536-12408675)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018935-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:12582173-12582236, 12582762-12582881, 12586074-12586288, 12586592-12586786, 12587717-12587924, 12589081-12589182, 12589411-12589646, 12591143-12591224, 12591989-12592174, 12593932-12593958, 12595907-12595915, 12597322-12597468, 12598227-12598446, 12600001-12600120, 12601813-12602074, 12606375-12606626, 12606808-12606943, 12609008-12609151, 12609750-12609850, 12610073-12610310, 12614196-12614696, 12619955-12620032, 12620672-12620921, 12622847-12623079, 12625287-12625441, 12627930-12628031, 12628385-12628558, 12628732-12629093, 12629313-12629567, 12630230-12630405, 12631367-12631602, 12631693-12631862, 12632135-12632261, 12635322-12635612)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018944-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12734692 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c12740549-12740536, c12740297-12738599, c12737029-12736968, c12736769-12736740, c12736519-12736362, c12736196-12735913, c12735823-12735596, c12735313-12735215, c12734921-12734881, c12734762-12734692, c12734576-12734545, c12734439-12734320, c12734118-12733987, c12733856-12733815, c12733627-12733493, c12733157-12732174, c12732007-12730708, c12730079-12729957, c12729744-12729623, c12729381-12729331)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018965-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12814949 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:12814761-12814949, 12815636-12815718, 12815867-12816012, 12816235-12816444, 12816731-12816850, 12817068-12817203, 12817685-12817802, 12817948-12818067, 12818218-12818329, 12819332-12819520, 12819822-12820009)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018977-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12814949 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:12814761-12814949, 12815636-12815718, 12815867-12816012, 12816235-12816444, 12816731-12816850, 12817068-12817203, 12817685-12817802, 12817948-12818067, 12819822-12819851)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018977-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12814949 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:12814761-12814949, 12815636-12815718, 12815867-12816012, 12816235-12816444, 12816731-12816850, 12817068-12817203, 12817685-12817802, 12817948-12818067, 12818218-12818329, 12819332-12819520, 12819857-12820017)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_018977-T3]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12947986 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:12947683-12947986, 12948085-12948191, 12948281-12949096, 12949436-12949546)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019007-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13312993 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c13313699-13313527, c13313167-13312993, c13312744-13312600, c13312321-13312174, c13311025-13310881, c13310736-13310527, c13310382-13310142, c13309878-13309753, c13309329-13309163, c13308880-13308655, c13308378-13308210, c13307746-13307632, c13307372-13307240, c13306923-13306720, c13306546-13306459, c13306252-13306017, c13305826-13305651)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019071-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13310527 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c13313699-13313527, c13313167-13312993, c13312744-13312600, c13312321-13312174, c13311025-13310881, c13310736-13310527, c13310382-13310142, c13309878-13309753, c13309329-13309163, c13308880-13308655, c13308378-13308210, c13307746-13307632, c13307372-13307240, c13306923-13306720, c13306546-13306459, c13306252-13306017, c13305826-13305651)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019071-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13486019 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:13475695-13475755, 13475949-13476103, 13476422-13476520, 13476883-13477153, 13478244-13478359, 13479138-13480226, 13480767-13480868, 13481547-13481624, 13481836-13482609, 13483016-13483189, 13483377-13483667, 13483821-13483896, 13484179-13484613, 13484751-13486019, 13486370-13486536, 13486821-13486946, 13487403-13487522, 13487736-13487873, 13488210-13488383)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019096-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13486370 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:13475695-13475755, 13475949-13476103, 13476422-13476520, 13476883-13477153, 13478244-13478359, 13479138-13480226, 13480767-13480868, 13481547-13481624, 13481836-13482609, 13483016-13483189, 13483377-13483667, 13483821-13483896, 13484179-13484613, 13484751-13486019, 13486370-13486536, 13486821-13486946, 13487403-13487522, 13487736-13487873, 13488210-13488383)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019096-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13766518 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:c13766644-13766518, c13766344-13766282, c13766183-13766103, c13765820-13765712, c13765603-13765453)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019139-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13987490 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:13984439-13984458, 13984759-13984890, 13984976-13985156, 13985310-13985365, 13985581-13985745, 13985925-13986082, 13986243-13986362, 13986944-13987107, 13987350-13987490, 13987711-13987758)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019168-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16254318 of lcl|scaffold_10 FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:16252863-16253034, 16253890-16253954, 16254116-16254157, 16254265-16254318, 16254921-16255040, 16255992-16256078, 16256687-16256813, 16257590-16257717, 16258477-16258562, 16259450-16259519, 16259933-16259972, 16260107-16260135)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019368-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_10:16918333-16918414, 16919343-16919419, 16920730-16920802, 16921825-16921968, 16922366-16922499, 16923439-16923597, 16924238-16924344, 16925013-16925134, 16925626-16925640, 16925889-16925900, 16926222-16926233, 16927239-16927250, 16927579-16927775)] [lcl|scaffold_10: delta, dna len= 17789119] -> [gnl|ncbi|FUN_019407-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:<1198-1378, 2280-2486, 2901-3083, 4575-4658, 4887-6775)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1198 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:<1198-1378, 2280-2486, 2901-3083, 4575-4658, 4887-6775)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:<1198-1378, 2280-2486, 2901-3083, 4575-6775)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1198 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:<1198-1378, 2280-2486, 2901-3083, 4575-6775)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 337693 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c338045-337937, c337799-337693, c337484-337426, c337327-337186, c337083-336994, c334926-334819, c334711-334624, c334299-334163, c333762-333544, c331571-331458, c328199-327975, c326878-326782, c326618-326527, c326049-325825)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 920400 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:906486-906538, 908224-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922304, 922682-922779, 922919-923047, 923259-923471)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 920649 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:906486-906538, 908224-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922304, 922682-922779, 922919-923047, 923259-923471)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 920400 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:907393-907536, 907895-908036, 908289-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922779, 922919-923047, 923259-923471)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 920649 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:907393-907536, 907895-908036, 908289-908380, 908561-908634, 908777-908929, 909628-909678, 910328-910442, 910751-910937, 911274-911798, 912585-912787, 913146-913205, 913412-913458, 913787-913983, 914677-914768, 916421-916567, 917292-917384, 918382-918467, 918708-918813, 919781-919856, 920316-920400, 920649-920741, 921066-921251, 921394-921478, 921619-921713, 921903-921981, 922203-922779, 922919-923047, 923259-923471)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 930068 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:929834-930068, 930233-930411, 930526-930654, 930808-930957, 931153-931392, 931647-932022, 932335-932610)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 950875 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:948495-948695, 949039-949197, 949467-949542, 949621-949668, 949797-949852, 949997-950059, 950154-950175, 950326-950454, 950759-950875, 951295-951421, 951507-952634)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 999397 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c1001662-1000541, c1000247-1000113, c999896-999777, c999489-999397, c999174-999097, c998996-998856, c998766-998596, c998442-998332, c998164-998027, c997831-997652, c997566-997372, c997272-997081, c996839-996707, c996480-996341, c996144-996028, c995929-995783, c995624-995503, c995335-995196, c992495-992355, c992098-991983, c991339-991178, c990686-990585, c990390-990275, c990136-989692, c989599-987976, c987376-987263, c986770-986622, c986390-986029, c985810-985578, c985218-985167, c982809-982619, c980017-979667, c979468-979343, c979068-978952, c978823-978634, c977196-977034, c976944-976827, c976768-976506, c976416-976258, c976034-975896, c975560-975514, c975362-975308, c974801-974647)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1484218 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:1483552-1483888, 1483975-1484053, 1484173-1484218, 1484325-1484422, 1484841-1484966, 1485093-1485181, 1485303-1485391, 1485520-1485580, 1485680-1485865, 1486065-1486145, 1486507-1486655, 1486806-1486946, 1487086-1487185, 1487416-1487614, 1487798-1487874, 1488196-1488334, 1488443-1488628, 1488936-1489051, 1489197-1489262, 1489369-1489721)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1629440 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c1630568-1630438, c1629508-1629440, c1629204-1629091, c1628970-1628769, c1628163-1628110, c1627160-1626730)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1928924 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:<1928924-1929009, 1929112-1929160, 1929314-1929463, 1932431-1932607, 1932933-1933016, 1933677-1933763, 1934021-1934118, 1935130-1935227, 1935804-1935899, 1937045-1937154)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2649526 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c2659229-2659096, c2658613-2658506, c2658340-2658287, c2658140-2658078, c2657930-2657793, c2657597-2657495, c2657133-2657064, c2656879-2656766, c2656511-2656433, c2655622-2655076, c2654894-2654745, c2654602-2654490, c2653527-2653355, c2653046-2652952, c2652127-2652094, c2651975-2651930, c2651755-2651575, c2651349-2651223, c2650779-2650610, c2650435-2650354, c2650013-2649905, c2649795-2649693, c2649594-2649526, c2649372-2649215)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2672103 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c2672230-2672103, c2671945-2671885, c2671662-2671535, c2671444-2671362, c2671213-2671022, c2670811-2670739, c2670619-2670457, c2670295-2670214, c2670030-2669831)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2752449 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:2747734-2747778, 2748074-2748095, 2748762-2748881, 2750072-2750347, 2750558-2751134, 2751262-2751447, 2751623-2751707, 2751850-2752449, 2753448-2753622)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2753448 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:2747734-2747778, 2748074-2748095, 2748762-2748881, 2750072-2750347, 2750558-2751134, 2751262-2751447, 2751623-2751707, 2751850-2752449, 2753448-2753622)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3025351 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:3018410-3021817, 3021952-3022100, 3022578-3022669, 3022756-3022969, 3023115-3023304, 3023504-3023687, 3023920-3024062, 3024518-3024579, 3024863-3025001, 3025109-3025351, 3025480-3025577, 3025920-3026001, 3026151-3026268, 3026367-3026478, 3026603-3026708, 3026843-3026983, 3027531-3027644, 3027819-3028020, 3028135-3028592, 3028684-3028731, 3028827-3028994, 3029453-3029554, 3029739-3029795, 3029957-3030080, 3030178-3030321, 3030807-3030898, 3031019-3031090, 3032347-3032415, 3032711-3032932)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3159011 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:3154063-3154218, 3154988-3155099, 3155249-3155421, 3155767-3155909, 3156020-3156150, 3156268-3156399, 3156606-3156708, 3156849-3156982, 3157235-3157370, 3157460-3157572, 3157665-3157829, 3157939-3158061, 3158274-3158486, 3158703-3159011, 3159461-3159616, 3159863-3160017, 3160232-3160841)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c>3175911-3175764, c3175353-3175160, c3174842-3174653, c3174519-3174391, c3174201-3174072, c3173912-3173841, c3173555-3173408, c3172012-3171878, c3171783-3171734, c3171585-3171106)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 3175911 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c>3175911-3175764, c3175353-3175160, c3174842-3174653, c3174519-3174391, c3174201-3174072, c3173912-3173841, c3173555-3173408, c3172012-3171878, c3171783-3171734, c3171585-3171106)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3286036 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c3291610-3291561, c3289298-3289226, c3289111-3288998, c3288866-3288738, c3288442-3288132, c3287873-3287820, c3287429-3287390, c3286817-3286802, c3286576-3286544, c3286393-3286326, c3286205-3286036, c3285614-3284608)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3506991 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:3498815-3498868, 3500413-3500526, 3501412-3501486, 3501656-3501781, 3502017-3502160, 3502274-3502315, 3502591-3502719, 3505457-3505549, 3505983-3506093, 3506908-3506991, 3507880-3507951, 3508672-3508869, 3508967-3511074)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3753424 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c3753507-3753424, c3753197-3748910)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4217205 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c4217383-4217205, c4216524-4216361, c4215199-4215034, c4214569-4214247)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4278174 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c4278948-4278637, c4278245-4278174, c4277446-4277375, c4277094-4277013, c4276871-4276767, c4276657-4276589, c4275840-4275760, c4275666-4275606, c4275463-4275368, c4275084-4275015, c4274563-4274485, c4273454-4273272, c4273219-4273124, c4273021-4272848, c4272755-4272675, c4271074-4270749)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4733380 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c4733854-4733740, c4733588-4733380, c4733287-4733203, c4733111-4732895, c4732741-4732678, c4732595-4732093)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5235688 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:5227043-5227184, 5227993-5228113, 5228844-5228953, 5229718-5229806, 5230059-5230173, 5230652-5230779, 5231104-5231252, 5231424-5231574, 5231950-5232124, 5232333-5232406, 5232641-5232785, 5233272-5233414, 5233573-5233716, 5233848-5234099, 5234312-5234442, 5235259-5235422, 5235549-5235688, 5236105-5236221, 5237147-5237223, 5237636-5237762, 5238098-5238181, 5238288-5238364, 5238569-5238655, 5238739-5238844, 5238988-5239104, 5239192-5239296, 5239386-5239493, 5239738-5239827, 5239928-5240041, 5240188-5241797)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5813454 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:5811289-5811414, 5811566-5811774, 5811888-5812034, 5812210-5812333, 5813072-5813187, 5813349-5813454, 5814116-5814246)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6017737 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c6021258-6021089, c6019741-6019653, c6019433-6019243, c6017830-6017737, c6017640-6017547, c6016373-6016273, c6016032-6015940, c6015756-6015624, c6015077-6014989, c6014516-6014367, c6013830-6013732, c6013287-6012026)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8341528 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c8346911-8346626, c8345946-8345771, c8345660-8345510, c8345394-8345334, c8345016-8344922, c8344710-8344530, c8344265-8344207, c8344075-8343954, c8343562-8343522, c8343427-8343315, c8343137-8343063, c8342953-8342864, c8342709-8342596, c8342049-8341918, c8341773-8341528, c8341406-8340274)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8348174 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:8346748-8347465, 8347548-8347758, 8348045-8348174, 8348390-8348464, 8348732-8349137)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8491161 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c8491317-8491161, c8490365-8490183, c8489837-8489649, c8489263-8489087, c8488825-8488684, c8488433-8488195, c8487913-8486611)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8644129 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:8637312-8637534, 8637742-8637828, 8638100-8638242, 8640193-8640329, 8640510-8640603, 8640749-8640918, 8641485-8641574, 8641883-8642025, 8642599-8642785, 8643631-8643799, 8643973-8644129, 8644258-8644341, 8644477-8644614, 8645062-8645298, 8645662-8645733, 8645876-8646548)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8777499 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:8775016-8775236, 8775503-8775591, 8776021-8776108, 8776296-8776373, 8776560-8776647, 8776966-8777050, 8777358-8777499, 8777707-8777799, 8778161-8778277, 8778385-8778595, 8778723-8779149)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9375632 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:9360803-9360858, 9361726-9361856, 9362058-9362174, 9362325-9362443, 9362590-9362739, 9362869-9363040, 9363247-9363386, 9363511-9363589, 9363707-9363826, 9363937-9364022, 9364132-9364207, 9364333-9364382, 9364469-9364535, 9364773-9364895, 9365108-9365211, 9365322-9365445, 9365536-9365616, 9365741-9365963, 9366052-9366143, 9366273-9366407, 9366566-9366737, 9366839-9367011, 9367147-9367248, 9367363-9367486, 9367639-9367784, 9367898-9367952, 9368054-9368168, 9368283-9368351, 9368492-9368609, 9368731-9368898, 9369047-9369126, 9369251-9369356, 9369438-9369485, 9369984-9370102, 9370255-9370405, 9370569-9370634, 9370765-9370854, 9371184-9371250, 9371470-9371561, 9371671-9371737, 9371822-9372019, 9372167-9372378, 9372514-9372557, 9372651-9372843, 9373888-9374035, 9374394-9374499...] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9375596 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:9360803-9360858, 9363247-9363386, 9363511-9363589, 9363707-9363826, 9363937-9364022, 9364132-9364207, 9364333-9364382, 9364469-9364535, 9364773-9364895, 9365108-9365211, 9365322-9365445, 9365536-9365616, 9365741-9365963, 9366052-9366143, 9366273-9366407, 9366566-9366737, 9366839-9367011, 9367147-9367248, 9367363-9367486, 9367639-9367784, 9367898-9367952, 9368054-9368168, 9368283-9368351, 9368492-9368609, 9368731-9368898, 9369047-9369126, 9369251-9369356, 9369438-9369485, 9369984-9370102, 9370255-9370405, 9370569-9370634, 9370765-9370854, 9371184-9371250, 9371470-9371561, 9371671-9371737, 9371822-9372019, 9372167-9372378, 9372514-9372557, 9372651-9372843, 9373888-9374035, 9374394-9374499, 9374577-9374665, 9374875-9374946, 9375054-9375596, 9375889-9376794)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9470074 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:9465029-9465061, 9465396-9465586, 9465714-9465751, 9465944-9466033, 9466192-9466400, 9469036-9469173, 9469406-9469543, 9469943-9470074, 9470643-9470726)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9664233 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c9668380-9668152, c9667789-9667754, c9667376-9667325, c9667102-9666780, c9666547-9666332, c9665989-9665751, c9664394-9664233, c9664020-9663862, c9663725-9663590, c9663483-9663344, c9663129-9663030, c9662830-9662685, c9662466-9661817)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9846524 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c9849548-9849512, c9849386-9849313, c9849148-9849093, c9849000-9848928, c9848804-9848749, c9848673-9848544, c9848455-9848333, c9848203-9848138, c9847578-9847508, c9847370-9847280, c9847186-9847095, c9846955-9846778, c9846622-9846524, c9846011-9845940, c9845832-9845758, c9845653-9845511, c9845266-9845074, c9844963-9844767, c9844559-9844481, c9844312-9844217, c9844062-9843934)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10324703 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c10325004-10324703, c10324674-10322873)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10324674 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c10325004-10324703, c10324674-10322873)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10611119 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:10596105-10596234, 10596466-10596532, 10596629-10597591, 10598833-10598885, 10599440-10599515, 10601457-10601686, 10601783-10601920, 10602451-10602522, 10603456-10603541, 10604088-10604148, 10605329-10605475, 10606216-10606343, 10609490-10609604, 10610334-10610421, 10610622-10610702, 10611004-10611119, 10611587-10611766, 10612649-10615492)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10645930 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c10648137-10647895, c10647739-10647530, c10647295-10647098, c10646598-10646434, c10646112-10645930, c10645811-10645681, c10644884-10644726, c10644381-10644078, c10643834-10643703, c10643487-10643156, c10642961-10642769, c10642572-10642468, c10642036-10641909, c10641554-10641420, c10641141-10641015, c10640812-10640625, c10640425-10640279, c10640095-10637119)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10831987 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c10833058-10832950, c10832196-10831987, c10831589-10831403, c10829236-10829186, c10828742-10828736)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10831403 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c10833058-10832950, c10832196-10831987, c10831589-10831403, c10829236-10829186, c10828742-10828736)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10831987 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c10833058-10832950, c10832196-10831987, c10831589-10831412, c10829236-10829186, c10828742-10828736)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11079733 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:11079478-11079733, 11080190-11080320, 11080569-11080605, 11081039-11081244, 11081734-11081808, 11081915-11082008, 11082162-11082274, 11082592-11082691, 11082917-11083088, 11083203-11084569)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11080320 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:11079478-11079733, 11080190-11080320, 11080569-11080605, 11081039-11081244, 11081734-11081808, 11081915-11082008, 11082162-11082274, 11082592-11082691, 11082917-11083088, 11083203-11084569)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11080320 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:11079478-11080088, 11080190-11080320, 11080569-11080605, 11081039-11081244, 11081734-11081808, 11081915-11082008, 11082162-11082274, 11082592-11082691, 11082917-11083088, 11083203-11084569)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12734692 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c12740549-12740536, c12740297-12738599, c12737029-12736968, c12736769-12736740, c12736519-12736362, c12736196-12735913, c12735823-12735596, c12735313-12735215, c12734921-12734881, c12734762-12734692, c12734576-12734545, c12734439-12734320, c12734118-12733987, c12733856-12733815, c12733627-12733493, c12733157-12732174, c12732007-12730708, c12730079-12729957, c12729744-12729623, c12729381-12729119)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12814949 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:12814705-12814949, 12815636-12815718, 12815867-12816012, 12816235-12816444, 12816731-12816850, 12817068-12817203, 12817685-12817802, 12817948-12818067, 12818218-12818329, 12819332-12819520, 12819822-12820677)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12814949 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:12814705-12814949, 12815636-12815718, 12815867-12816012, 12816235-12816444, 12816731-12816850, 12817068-12817203, 12817685-12817802, 12817948-12818067, 12819822-12820677)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12814949 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:12814705-12814949, 12815636-12815718, 12815867-12816012, 12816235-12816444, 12816731-12816850, 12817068-12817203, 12817685-12817802, 12817948-12818067, 12818218-12818329, 12819332-12819520, 12819857-12820677)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12947986 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:12947559-12947986, 12948085-12948191, 12948281-12949096, 12949436-12949659)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13312993 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c13314088-13314038, c13313797-13313527, c13313167-13312993, c13312744-13312600, c13312321-13312174, c13311025-13310881, c13310736-13310527, c13310382-13310142, c13309878-13309753, c13309329-13309163, c13308880-13308655, c13308378-13308210, c13307746-13307632, c13307372-13307240, c13306923-13306720, c13306546-13306459, c13306252-13306017, c13305826-13305420)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13310527 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c13314088-13314038, c13313797-13313527, c13313167-13312993, c13312744-13312600, c13312321-13312174, c13311025-13310881, c13310736-13310527, c13310382-13310142, c13309878-13309753, c13309329-13309163, c13308880-13308655, c13308378-13308210, c13307746-13307632, c13307372-13307240, c13306923-13306720, c13306546-13306459, c13306252-13306017, c13305826-13305420)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 13486019 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:13475695-13475755, 13475949-13476103, 13476422-13476520, 13476883-13477153, 13478244-13478359, 13479138-13480226, 13480767-13480868, 13481547-13481624, 13481836-13482609, 13483016-13483189, 13483377-13483667, 13483821-13483896, 13484179-13484613, 13484751-13486019, 13486370-13486536, 13486821-13486946, 13487403-13487522, 13487736-13487873, 13488210-13489848)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 13486370 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:13475695-13475755, 13475949-13476103, 13476422-13476520, 13476883-13477153, 13478244-13478359, 13479138-13480226, 13480767-13480868, 13481547-13481624, 13481836-13482609, 13483016-13483189, 13483377-13483667, 13483821-13483896, 13484179-13484613, 13484751-13486019, 13486370-13486536, 13486821-13486946, 13487403-13487522, 13487736-13487873, 13488210-13489848)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13766518 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c13767036-13766967, c13766666-13766518, c13766344-13766282, c13766183-13766103, c13765820-13765712, c13765603-13765303)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13987490 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:13983429-13983523, 13984425-13984458, 13984759-13984890, 13984976-13985156, 13985310-13985365, 13985581-13985745, 13985925-13986082, 13986243-13986362, 13986944-13987107, 13987350-13987490, 13987711-13987817)] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14839148 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:c14850297-14850285, c14849996-14849922, c14849566-14849451, c14847168-14847064, c14846707-14846545, c14844161-14843974, c14843334-14843179, c14842526-14842413, c14842176-14842069, c14841530-14841419, c14841317-14839148, c14838865-14838717, c14838681-14838063)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [lcl|scaffold_10:c>15313219-15312685] [lcl|scaffold_10: delta, dna len= 17789119]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16254318 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:16252754-16253034, 16253890-16253954, 16254116-16254157, 16254265-16254318, 16254921-16255040, 16255992-16256078, 16256687-16256813, 16257590-16257717, 16258477-16258562, 16259450-16259519, 16259933-16259972, 16260107-16260192)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 17687357 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:17687199-17687357, 17687726-17688007, 17688511-17688557, 17690598-17690715, 17691051-17691588)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 17687726 of lcl|scaffold_10 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_10:17687199-17687357, 17687726-17688007, 17688511-17688557, 17690598-17690715, 17691051-17691588)] [lcl|scaffold_10: delta, dna len= 17789119]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c104364-104254, c103967-103818, c101060-100902, c99938-99759, c99424-99356, c99266-99222, c99097-99022, c98410-98254, c98170-98029, c97920-97778, c97144-96937, c96536-96396, c96111-95905, c95543-95487, c95193-95184, c94983-94898)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026576-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 343744 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:341579-341612, 342997-343156, 343336-343489, 343637-343744, 344443-344495, 346455-346550, 347490-347571, 348242-348367, 349243-349309, 349690-349723, 349862-349989, 350134-350270, 351629-351734, 353270-353427, 355155-355332, 355770-355787, 356158-356335, 356424-356592, 356747-356932, 357799-357904, 359156-359411, 359705-359793, 360272-360360, 361268-361344, 361466-361520)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026595-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 376709 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:375143-375262, 375424-375546, 375632-375709, 375834-375996, 376105-376240, 376343-376494, 376593-376709, 376889-377118)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026598-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 376709 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:375193-375262, 375434-375546, 375632-375709, 375834-375996, 376105-376240, 376343-376494, 376593-376709, 376889-377118)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026598-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1263956 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:1261575-1261661, 1262014-1262124, 1262247-1262312, 1262452-1262497, 1262955-1263093, 1263832-1263956, 1265030-1265158, 1265450-1265580, 1265841-1265922, 1266217-1266326, 1266556-1266777, 1268698-1268758, 1268879-1268959, 1271452-1271519, 1272255-1272354, 1273256-1273317, 1274830-1274945, 1275513-1275693)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026691-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1615852 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c1621869-1621851, c1621549-1621475, c1619476-1619382, c1618991-1618831, c1618376-1618274, c1618203-1618060, c1617956-1617771, c1617684-1617428, c1617298-1616249, c1615951-1615852, c1615484-1615377, c1615031-1613535, c1613423-1613301, c1613212-1613084, c1612718-1612526, c1612367-1612243, c1612154-1611964, c1611411-1611278, c1611194-1610962)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026732-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c1723759-1723701, c1722985-1722886, c1722403-1722396, c1720728-1720554)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026743-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:1783072-1783206, 1783427-1783620, 1785680-1785870, 1786931-1789309, 1789889-1790550, 1791970-1792189, 1792473-1792683, 1793111-1793254, 1793913-1793925, 1794621-1794696, 1795026-1795032, 1795326-1795464)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026751-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c1838595-1838329, c1836901-1836832, c1836582-1836509, c1836147-1836136, c1835457-1835328, c1835250-1835145, c1835050-1834995, c1834899-1834802, c1834396-1834232, c1834147-1834070)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026759-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c1983743-1983664, c1983572-1983521, c1983432-1983355, c1983231-1983166, c1982635-1982540, c1982470-1982399, c1982280-1982209, c1981961-1981694, c1981449-1981391, c1981278-1981205, c1981103-1981060, c1980903-1980795, c1980384-1980333, c1979825-1979640, c1979424-1979320, c1978653-1978576, c1978299-1978239, c1978012-1977954, c1977378-1977311, c1976844-1976801, c1976399-1976300, c1976069-1976018, c1975715-1975650, c1975413-1975399, c1975369-1975355, c1975278-1975264, c1975232-1975218, c1975188-<1975094)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026778-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2461261 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:2461184-2461261, 2461295-2461411)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026825-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2461295 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:2461184-2461261, 2461295-2461411)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026825-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3152033 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c3168266-3168119, c3168021-3167963, c3167877-3167848, c3167692-3167633, c3165024-3164874, c3164579-3164481, c3164121-3163961, c3162511-3162290, c3161956-3161856, c3161742-3161672, c3161540-3161440, c3161275-3161235, c3160550-3160452, c3160025-3159869, c3159768-3159634, c3158643-3158515, c3157790-3157565, c3156943-3156815, c3156282-3156099, c3155828-3155729, c3155580-3155446, c3155243-3155140, c3154854-3154647, c3154570-3154460, c3154316-3154209, c3154077-3153953, c3153761-3153679, c3153366-3153255, c3153047-3152986, c3152806-3152651, c3152153-3152033, c3151672-3151547, c3151403-3151328, c3151183-3151118, c3151034-3150882, c3150453-3150301, c3150073-3149865, c3149693-3149443, c3149312-3149157, c3149065-3148353)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_026908-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5183961 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c5185321-5185313, c5184712-5184477, c5184298-5184217, c5184092-5183961, c5183822-5183717, c5183626-5183569, c5183327-5183158, c5182977-5182775, c5182679-5182649, c5182538-5182467, c5182418-5182380, c5181442-5181329, c5181308-5181055)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027123-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c5410743-5410638, c5409518-5409427, c5408219-5408199, c5405864-5405790, c5405486-5405408, c5404970-5404858, c5403518-5403325, c5402865-5402791, c5401969-5401813, c5400860-5400696, c5399898-5399777, c5399675-5399495, c5399213-5399078, c5397924-5397829, c5397708-5397590, c5396670-5396537, c5396286-5396045, c5394783-5394591, c5394259-5394043, c5393900-5393796, c5392399-5392296, c5391725-5391642, c5390992-5390833, c5390653-5390509, c5390377-5390172, c5390030-5389856, c5389600-5389392, c5389065-5388902, c5388759-5388711, c5388444-5388284, c5387084-5386928, c5386203-5386117, c5385917-5385691, c5385476-5385264, c5385133-5384527, c5384424-5384224, c5382974-5382872, c5382691-5382560, c5379139-5378866, c5378681-5378567, c5377171-5377039, c5375837-5375734, c5375612-5375477, c53753...] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027142-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5388284 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c5410743-5410638, c5409518-5409427, c5408219-5408199, c5405864-5405790, c5405486-5405408, c5404970-5404858, c5403518-5403325, c5402865-5402791, c5401969-5401813, c5400860-5400696, c5399898-5399777, c5399675-5399495, c5399213-5399078, c5397924-5397829, c5397708-5397590, c5396670-5396537, c5396286-5396045, c5394783-5394591, c5394259-5394043, c5393900-5393796, c5392399-5392296, c5391725-5391642, c5390992-5390833, c5390653-5390509, c5390377-5390172, c5390030-5389856, c5389600-5389392, c5389065-5388902, c5388759-5388711, c5388444-5388284, c5387084-5386928, c5386203-5386117, c5385917-5385691, c5385476-5385264, c5385133-5384527, c5384424-5384224, c5382974-5382872, c5382691-5382560, c5379139-5378866, c5378681-5378567, c5377171-5377039, c5375837-5375734, c5375612-5375477, c53753...] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027142-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5349732 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c5410743-5410638, c5409518-5409427, c5408219-5408199, c5405864-5405790, c5405486-5405408, c5404970-5404858, c5403518-5403325, c5402865-5402791, c5401969-5401813, c5400860-5400696, c5399898-5399777, c5399675-5399495, c5399213-5399078, c5397924-5397829, c5397708-5397590, c5396670-5396537, c5396286-5396045, c5394783-5394591, c5394259-5394043, c5393900-5393796, c5392399-5392296, c5391725-5391642, c5390992-5390833, c5390653-5390509, c5390377-5390172, c5390030-5389856, c5389600-5389392, c5389065-5388902, c5388759-5388711, c5388444-5388284, c5387084-5386928, c5386203-5386117, c5385917-5385691, c5385476-5385264, c5385133-5384527, c5384424-5384224, c5382974-5382872, c5382691-5382560, c5379139-5378866, c5378681-5378567, c5377171-5377039, c5375837-5375734, c5375612-5375477, c53753...] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027142-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c5490408-5490339, c5489713-5489620, c5487678-5487666, c5487517-5487457, c5487297-5487205, c5486849-5486669, c5486420-5486333, c5486055-5485921, c5485788-5485676, c5485300-5485189, c5484938-5484726, c5484440-5484330, c5484143-5484009, c5483926-5483796, c5483692-5483606, c5483482-5483295, c5483179-5482951, c5482758-5482596, c5482374-5482228, c5481920-5481771, c5481581-5481471, c5481374-5481198, c5481059-5480902, c5480809-5480677, c5480590-5480444, c5480353-5480324, c5480206-5480107, c5479954-5479828, c5479744-5479689, c5479519-5479401, c5479314-5479138, c5479043-5478951, c5478840-5478688, c5478558-5478481, c5477984-5477891, c5477533-5477415, c5477213-5477151, c5477048-5475602, c5475450-5475194)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027155-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:5683299-5683326, 5683747-5683838, 5686687-5686770, 5687378-5687473, 5688616-5688764, 5692902-5692995, 5693866-5694066, 5694500-5694638, 5694846-5694955, 5695085-5695164, 5695599-5695756, 5695904-5696041, 5696487-5696620, 5696733-5696975, 5697178-5697288, 5697374-5697621, 5698354-5698459, 5699742-5699866, 5700576-5700681, 5700928-5701076, 5701222-5701313, 5701447-5701523, 5702124-5702137, 5702836-5702935, 5703337-5703453, 5703593-5703673, 5704013-5704118, 5704256-5704392, 5704763-5704902, 5704996-5705077, 5705386-5705605, 5706346-5706408, 5706560-5706813, 5707147-5707486, 5707596-5707693, 5707825-5707909, 5708718-5708841, 5709397-5709514, 5709971-5710088, 5710202-5710362, 5713356-5713487)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027177-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:5828501-5828509, 5828827-5828833, 5829113-5829175, 5829342-5829477, 5829582-5829668, 5829756-5829876, 5830090-5830224, 5830429-5830540, 5830762-5830942, 5831189-5831249, 5831341-5831512, 5831746-5831870, 5832026-5832193, 5832393-5832491, 5832594-5832731, 5832957-5833133)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027192-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6087595 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:6086080-6086215, 6086316-6086406, 6086550-6086677, 6086771-6086850, 6087214-6087310, 6087506-6087595, 6087723-6087787, 6087924-6087963, 6088204-6088330, 6088502-6088619)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027211-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6087723 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:6086080-6086215, 6086316-6086406, 6086550-6086677, 6086771-6086850, 6087214-6087310, 6087506-6087595, 6087723-6087787, 6087924-6087963, 6088204-6088330, 6088502-6088619)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027211-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7223230 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:7221935-7222291, 7222393-7222451, 7222539-7222591, 7222684-7222870, 7223090-7223230, 7223593-7223707, 7223955-7224114, 7224391-7224428)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027298-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7223593 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:7221935-7222291, 7222393-7222451, 7222539-7222591, 7222684-7222870, 7223090-7223230, 7223593-7223707, 7223955-7224114, 7224391-7224428)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027298-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8036102 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c8037822-8037774, c8037157-8037023, c8036845-8036664, c8036576-8036459, c8036245-8036102, c8035981-8035859, c8035668-8035514, c8035418-8035308, c8035195-8035025)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027367-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8350507 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:8347445-8347838, 8348361-8348636, 8348674-8348939, 8349594-8349731, 8350087-8350183, 8350371-8350507, 8350816-8350975, 8351179-8352077)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027391-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8712755 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c8717246-8717043, c8716264-8716086, c8715654-8715567, c8715190-8715111, c8714925-8714863, c8714735-8714681, c8714521-8714381, c8714241-8714167, c8713961-8713860, c8713739-8713622, c8713426-8713390, c8713205-8713174, c8713012-8712968, c8712852-8712755, c8712415-8712334, c8712220-8712120, c8711979-8711864, c8711722-8711622, c8711502-8711413, c8711305-8711101, c8710947-8710830, c8710691-8710635, c8710514-8710392, c8710282-8710133, c8709901-8709866, c8709660-8709636, c8709504-8709470, c8709378-8709244, c8709044-8708964, c8708719-8708498)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027430-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8930713 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:8920126-8920212, 8920411-8920547, 8920663-8920774, 8921006-8921104, 8921262-8921363, 8921559-8921628, 8921736-8921848, 8922101-8922196, 8924855-8925055, 8925140-8925283, 8925432-8925577, 8925760-8926005, 8926105-8926247, 8926389-8926563, 8926780-8926943, 8927184-8927308, 8927412-8927617, 8929203-8929383, 8929504-8929674, 8930151-8930367, 8930477-8930713, 8930915-8931080, 8931473-8931545, 8931702-8931916, 8932735-8932855, 8933061-8933192, 8933325-8933495)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027452-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8930915 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:8920126-8920212, 8920411-8920547, 8920663-8920774, 8921006-8921104, 8921262-8921363, 8921559-8921628, 8921736-8921848, 8922101-8922196, 8924855-8925055, 8925140-8925283, 8925432-8925577, 8925760-8926005, 8926105-8926247, 8926389-8926563, 8926780-8926943, 8927184-8927308, 8927412-8927617, 8929203-8929383, 8929504-8929674, 8930151-8930367, 8930477-8930713, 8930915-8931080, 8931473-8931545, 8931702-8931916, 8932735-8932855, 8933061-8933192, 8933325-8933495)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027452-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9646464 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c9655297-9655279, c9653646-9653437, c9650908-9650783, c9650661-9650635, c9649349-9649323, c9649196-9647139, c9646908-9646759, c9646604-9646464, c9646114-9646058, c9645001-9644960, c9644813-9644769, c9644679-9644632, c9644445-9644395, c9644302-9644258, c9643995-9643942, c9643760-9643710, c9642821-9642636, c9642431-9642384, c9642230-9642195, c9641872-9641825, c9641740-9641687, c9641312-9641265, c9641038-9640994, c9640772-9640740, c9638323-9638276, c9637530-9637486, c9637383-9637360, c9635131-9635087, c9634930-9634782)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027519-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9725692 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:9722561-9722573, 9723176-9723364, 9724166-9724204, 9725630-9725692, 9725939-9726070, 9726302-9726324)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027528-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9831143 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c9831162-9831143, c9830319-9829218)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027539-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9879878 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:9879275-9879445, 9879749-9879878, 9879988-9880115, 9880202-9880277, 9880422-9880573, 9880732-9880862, 9881102-9881340, 9881683-9881940, 9882024-9882103, 9882265-9882405, 9882631-9882730, 9882820-9882913, 9883009-9883070, 9883209-9883264)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027545-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10656856 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c10656941-10656856, c10656093-10655931, c10655596-10655409, c10655218-10655068, c10654574-10654392, c10654305-10654168, c10654028-10653837, c10653557-10653251, c10652945-10652877, c10652240-10652107, c10651816-10651696, c10651482-10651274, c10650858-10650652, c10650546-10650418, c10650244-10649966, c10649752-10649660, c10648862-10648804, c10646965-10646692)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027613-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10777507 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c10781759-10781752, c10781164-10781061, c10780620-10780553, c10780255-10780165, c10779869-10779748, c10779568-10779452, c10779212-10779132, c10779037-10778938, c10778634-10778504, c10778412-10778321, c10778227-10778170, c10778009-10777907, c10777750-10777699, c10777589-10777507, c10777373-10777284, c10777195-10777129, c10777023-10776939)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027622-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10777373 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c10781759-10781752, c10781164-10781061, c10780620-10780553, c10780255-10780165, c10779869-10779748, c10779568-10779452, c10779212-10779132, c10779037-10778938, c10778634-10778504, c10778412-10778321, c10778227-10778170, c10778009-10777907, c10777750-10777699, c10777589-10777507, c10777373-10777284, c10777195-10777129, c10777023-10776939)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027622-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11142186 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c11148315-11148304, c11146319-11146233, c11145719-11145645, c11144773-11144704, c11144501-11144389, c11143790-11143710, c11142282-11142186, c11141941-11141906, c11141168-11141030, c11140814-11140730, c11140488-11140363, c11140227-11140110, c11139982-11139852, c11139748-11139645, c11139494-11139391, c11139299-11139222, c11138952-11138876, c11137763-11137674, c11137577-11137463, c11137204-11137113, c11136909-11136862)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027664-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11165646 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:11158142-11158150, 11158629-11158662, 11158862-11158998, 11159127-11159162, 11159998-11160118, 11160242-11160357, 11160463-11160556, 11160660-11160719, 11160833-11161300, 11161496-11161620, 11161828-11161926, 11163127-11163174, 11163918-11164050, 11165627-11165646, 11167144-11168782, 11170150-11170239, 11173058-11173152)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027667-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11167144 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:11158142-11158150, 11158629-11158662, 11158862-11158998, 11159127-11159162, 11159998-11160118, 11160242-11160357, 11160463-11160556, 11160660-11160719, 11160833-11161300, 11161496-11161620, 11161828-11161926, 11163127-11163174, 11163918-11164050, 11165627-11165646, 11167144-11168782, 11170150-11170239, 11173058-11173152)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027667-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c11395038-11394974, c11394723-11394638, c11394075-11394064, c11393244-11393155, c11392794-11392732, c11392394-11392265, c11392163-11391997, c11391874-11391761, c11391432-11391327, c11391232-11391169, c11390968-11390891, c11390614-11390526, c11390221-11390156, c11390017-11389970, c11389677-11389636, c11389491-11389368, c11389254-11389118, c11388697-11388608, c11388421-11388280, c11388160-11387997, c11387738-11387622, c11387503-11387441, c11387248-11387173, c11386695-11386609)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027696-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:11581562-11581566, 11582199-11582316, 11582500-11582571, 11583221-11583349, 11583772-11583782, 11584234-11584407, 11584704-11584938, 11585422-11585526, 11585908-11586168, 11586371-11586553, 11586931-11587067, 11587272-11587383, 11587589-11587705, 11588020-11588118, 11588346-11588429, 11588907-11589020)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027712-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11726247 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:11721720-11721962, 11722257-11723767, 11723897-11724128, 11724233-11724389, 11724592-11724680, 11724772-11724825, 11724940-11725042, 11725185-11725253, 11725342-11725408, 11725582-11725688, 11725814-11725874, 11726045-11726247, 11726384-11726428, 11726523-11726621, 11726876-11726940, 11727062-11727143, 11727534-11727682)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027727-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11873074 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:11871745-11871792, 11872166-11872318, 11872410-11872501, 11872606-11872764, 11872908-11873074, 11873248-11873426, 11873639-11873809, 11873937-11874128, 11874245-11874304, 11874390-11874470, 11874732-11874971, 11875197-11875298, 11875439-11875687, 11875910-11876596)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027747-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11873248 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:11871745-11871792, 11872166-11872318, 11872410-11872501, 11872606-11872764, 11872908-11873074, 11873248-11873426, 11873639-11873809, 11873937-11874128, 11874245-11874304, 11874390-11874470, 11874732-11874971, 11875197-11875298, 11875439-11875687, 11875910-11876596)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027747-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12038344 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:12038333-12038344, 12038767-12038895, 12039000-12039033, 12039794-12039987, 12040128-12040267, 12040380-12040496, 12040829-12040951, 12041005-12041097, 12041286-12041653, 12041768-12041856, 12041966-12042054, 12042246-12042314, 12042408-12042558, 12042665-12042901)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027759-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:<12088334-12088381, 12091186-12091329, 12091855-12091995, 12092135-12092317, 12092713-12092850, 12093182-12093367, 12093533-12093655, 12093944-12094126, 12094397-12094525, 12095445-12095549, 12095698-12096156, 12096384-12096466, 12096591-12096729, 12096935-12097051, 12097181-12097336, 12097477-12097677, 12097874-12097972, 12098293-12098475, 12098801-12098974, 12099147-12099281, 12100178-12100374, 12100613-12100748, 12101165-12101347, 12101927-12102076, 12102344-12102514, 12102763-12102918, 12103084-12103233, 12103467-12103637, 12103835-12103968, 12105008-12105215, 12105731-12105913, 12106203-12106316, 12106521-12106675, 12106786-12106933, 12107808-12107902, 12108726-12108957, 12109356-12109553, 12111212-12111337, 12112287-12112442, 12112723-12112765, 12113468-12113550)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027766-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12088334 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:<12088334-12088381, 12091186-12091329, 12091855-12091995, 12092135-12092317, 12092713-12092850, 12093182-12093367, 12093533-12093655, 12093944-12094126, 12094397-12094525, 12095445-12095549, 12095698-12096156, 12096384-12096466, 12096591-12096729, 12096935-12097051, 12097181-12097336, 12097477-12097677, 12097874-12097972, 12098293-12098475, 12098801-12098974, 12099147-12099281, 12100178-12100374, 12100613-12100748, 12101165-12101347, 12101927-12102076, 12102344-12102514, 12102763-12102918, 12103084-12103233, 12103467-12103637, 12103835-12103968, 12105008-12105215, 12105731-12105913, 12106203-12106316, 12106521-12106675, 12106786-12106933, 12107808-12107902, 12108726-12108957, 12109356-12109553, 12111212-12111337, 12112287-12112442, 12112723-12112765, 12113468-12113550)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027766-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12106675 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:<12088334-12088381, 12091186-12091329, 12091855-12091995, 12092135-12092317, 12092713-12092850, 12093182-12093367, 12093533-12093655, 12093944-12094126, 12094397-12094525, 12095445-12095549, 12095698-12096156, 12096384-12096466, 12096591-12096729, 12096935-12097051, 12097181-12097336, 12097477-12097677, 12097874-12097972, 12098293-12098475, 12098801-12098974, 12099147-12099281, 12100178-12100374, 12100613-12100748, 12101165-12101347, 12101927-12102076, 12102344-12102514, 12102763-12102918, 12103084-12103233, 12103467-12103637, 12103835-12103968, 12105008-12105215, 12105731-12105913, 12106203-12106316, 12106521-12106675, 12106786-12106933, 12107808-12107902, 12108726-12108957, 12109356-12109553, 12111212-12111337, 12112287-12112442, 12112723-12112765, 12113468-12113550)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027766-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12387830 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:12386177-12386465, 12386679-12386972, 12387191-12387464, 12387692-12387830, 12389281-12389463)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027797-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13561768 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c13566638-13566633, c13565700-13565599, c13565123-13564949, c13563033-13562834, c13561908-13561768, c13561445-13561253, c13560666-13560493, c13558873-13558743, c13558455-13558002, c13557906-13557152, c13556709-13556572, c13556357-13556224, c13556066-13555900, c13555603-13555404, c13554909-13554868)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027919-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14040868 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:14036918-14036941, 14037217-14037408, 14037647-14037823, 14037904-14038033, 14038119-14038246, 14038333-14038408, 14039073-14039224, 14039402-14039532, 14039626-14039870, 14040146-14040397, 14040521-14040600, 14040728-14040868, 14040990-14041089, 14041202-14041295, 14041446-14041507, 14042021-14042064)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_027981-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14438570 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:14437957-14437995, 14438388-14438570, 14438814-14439209)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028016-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15175558 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:15174629-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15188654-15188687)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028081-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15176770 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:15174629-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15188654-15188687)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028081-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15175558 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:15174629-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15184893-15185114, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15189526-15189529)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028081-T4]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15176770 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:15174629-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15184893-15185114, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15189526-15189529)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028081-T4]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15569501 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:15568318-15568380, 15568608-15568746, 15568868-15569501, 15569789-15569810)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028124-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15919393 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:15913420-15913495, 15913607-15913827, 15913911-15913968, 15914076-15914236, 15914413-15914595, 15914717-15914800, 15917292-15917539, 15917608-15917722, 15918309-15918398, 15918512-15918585, 15918704-15918854, 15918958-15919393, 15919563-15919861, 15920047-15920145, 15920356-15920403, 15920531-15920623)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028152-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c>16405054-16404869, c16404793-16403801)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028194-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 16405054 of lcl|scaffold_15 FEATURE: CDS: hypothetical protein [(lcl|scaffold_15:c>16405054-16404869, c16404793-16403801)] [lcl|scaffold_15: delta, dna len= 16416864] -> [gnl|ncbi|FUN_028194-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 343744 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:341579-341612, 342997-343156, 343336-343489, 343637-343744, 344443-344495, 346455-346550, 347490-347571, 348242-348367, 349243-349309, 349690-349723, 349862-349989, 350134-350270, 351629-351734, 353270-353427, 355155-355332, 355770-355787, 356158-356335, 356424-356592, 356747-356932, 357799-357904, 359156-359411, 359705-359793, 360272-360360, 361268-361344, 361466-361520)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 376709 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:375057-375262, 375424-375546, 375632-375709, 375834-375996, 376105-376240, 376343-376494, 376593-376709, 376889-377393)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 376709 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:375057-375262, 375434-375546, 375632-375709, 375834-375996, 376105-376240, 376343-376494, 376593-376709, 376889-377340)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1263956 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:1260681-1260831, 1261523-1261661, 1262014-1262124, 1262247-1262312, 1262452-1262497, 1262955-1263093, 1263832-1263956, 1265030-1265158, 1265450-1265580, 1265841-1265922, 1266217-1266326, 1266556-1266777, 1268698-1268758, 1268879-1268959, 1271452-1271519, 1272255-1272354, 1273256-1273317, 1274830-1274945, 1275513-1275693)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1615852 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c1621869-1621851, c1621549-1621475, c1619476-1619382, c1618991-1618831, c1618376-1618274, c1618203-1618060, c1617956-1617771, c1617684-1617428, c1617298-1616249, c1615951-1615852, c1615484-1615377, c1615031-1613535, c1613423-1613301, c1613212-1613084, c1612718-1612526, c1612367-1612243, c1612154-1611964, c1611411-1611278, c1611194-1610962)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2434242 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c2434696-2434242, c2434219-2434100)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2434219 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c2434696-2434242, c2434219-2434100)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2461261 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:2461135-2461261, 2461295-2461509)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2461295 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:2461135-2461261, 2461295-2461509)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2990689 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c2990915-2990689, c2990160-2990031, c2989890-2989784, c2989677-2989581, c2988969-2988874, c2988755-2988683, c2988323-2988218, c2987753-2987664, c2987484-2987399, c2986905-2986824, c2986300-2986150, c2985437-2985347, c2984320-2984246, c2984082-2983945)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3152033 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c3168266-3168119, c3168021-3167963, c3167877-3167848, c3167692-3167633, c3165024-3164874, c3164579-3164481, c3164121-3163961, c3162511-3162290, c3161956-3161856, c3161742-3161672, c3161540-3161440, c3161275-3161235, c3160550-3160452, c3160025-3159869, c3159768-3159634, c3158643-3158515, c3157790-3157565, c3156943-3156815, c3156282-3156099, c3155828-3155729, c3155580-3155446, c3155243-3155140, c3154854-3154647, c3154570-3154460, c3154316-3154209, c3154077-3153953, c3153761-3153679, c3153366-3153255, c3153047-3152986, c3152806-3152651, c3152153-3152033, c3151672-3151547, c3151403-3151328, c3151183-3151118, c3151034-3150882, c3150453-3150301, c3150073-3149865, c3149693-3149443, c3149312-3149157, c3149065-3147987)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4125030 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:4124786-4125030, 4125708-4126000, 4126209-4126288, 4126710-4126853, 4127692-4127767, 4128273-4128308, 4128730-4128818, 4128931-4129010, 4129454-4129515, 4129717-4129818, 4130000-4130143, 4130489-4130545, 4130715-4130830, 4131048-4131198, 4131227-4132271)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 4131198 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:4124786-4125030, 4125708-4126000, 4126209-4126288, 4126710-4126853, 4127692-4127767, 4128273-4128308, 4128730-4128818, 4128931-4129010, 4129454-4129515, 4129717-4129818, 4130000-4130143, 4130489-4130545, 4130715-4130830, 4131048-4131198, 4131227-4132271)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4131227 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:4124786-4125030, 4125708-4126000, 4126209-4126288, 4126710-4126853, 4127692-4127767, 4128273-4128308, 4128730-4128818, 4128931-4129010, 4129454-4129515, 4129717-4129818, 4130000-4130143, 4130489-4130545, 4130715-4130830, 4131048-4131198, 4131227-4132271)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5183961 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c5185438-5185313, c5184712-5184477, c5184298-5184217, c5184092-5183961, c5183822-5183717, c5183626-5183569, c5183327-5183158, c5182977-5182775, c5182679-5182649, c5182538-5182467, c5182418-5182380, c5181442-5181329, c5181308-5180547)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5388284 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c5410743-5410638, c5409518-5409427, c5408219-5408199, c5405864-5405790, c5405486-5405408, c5404970-5404858, c5403518-5403325, c5402865-5402791, c5401969-5401813, c5400860-5400696, c5399898-5399777, c5399675-5399495, c5399213-5399078, c5397924-5397829, c5397708-5397590, c5396670-5396537, c5396286-5396045, c5394783-5394591, c5394259-5394043, c5393900-5393796, c5392399-5392296, c5391725-5391642, c5390992-5390833, c5390653-5390509, c5390377-5390172, c5390030-5389856, c5389600-5389392, c5389065-5388902, c5388759-5388711, c5388444-5388284, c5387084-5386928, c5386203-5386117, c5385917-5385691, c5385476-5385264, c5385133-5384527, c5384424-5384224, c5382974-5382872, c5382691-5382560, c5379139-5378866, c5378681-5378567, c5377171-5377039, c5375837-5375734, c5375612-5375477, c53753...] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5349732 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c5410743-5410638, c5409518-5409427, c5408219-5408199, c5405864-5405790, c5405486-5405408, c5404970-5404858, c5403518-5403325, c5402865-5402791, c5401969-5401813, c5400860-5400696, c5399898-5399777, c5399675-5399495, c5399213-5399078, c5397924-5397829, c5397708-5397590, c5396670-5396537, c5396286-5396045, c5394783-5394591, c5394259-5394043, c5393900-5393796, c5392399-5392296, c5391725-5391642, c5390992-5390833, c5390653-5390509, c5390377-5390172, c5390030-5389856, c5389600-5389392, c5389065-5388902, c5388759-5388711, c5388444-5388284, c5387084-5386928, c5386203-5386117, c5385917-5385691, c5385476-5385264, c5385133-5384527, c5384424-5384224, c5382974-5382872, c5382691-5382560, c5379139-5378866, c5378681-5378567, c5377171-5377039, c5375837-5375734, c5375612-5375477, c53753...] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6087595 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:6085917-6086215, 6086316-6086406, 6086550-6086677, 6086771-6086850, 6087214-6087310, 6087506-6087595, 6087723-6087787, 6087924-6087963, 6088204-6088330, 6088502-6088619)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6087723 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:6085917-6086215, 6086316-6086406, 6086550-6086677, 6086771-6086850, 6087214-6087310, 6087506-6087595, 6087723-6087787, 6087924-6087963, 6088204-6088330, 6088502-6088619)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 7223230 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:7221834-7222291, 7222393-7222451, 7222539-7222591, 7222684-7222870, 7223090-7223230, 7223593-7223707, 7223955-7224114, 7224391-7224934)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7223593 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:7221834-7222291, 7222393-7222451, 7222539-7222591, 7222684-7222870, 7223090-7223230, 7223593-7223707, 7223955-7224114, 7224391-7224934)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8036102 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c8037822-8037774, c8037157-8037023, c8036845-8036664, c8036576-8036459, c8036245-8036102, c8035981-8035859, c8035668-8035514, c8035418-8035308, c8035195-8034417)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8350507 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:8347445-8347838, 8348361-8348636, 8348674-8348939, 8349594-8349731, 8350087-8350183, 8350371-8350507, 8350816-8350975, 8351179-8352077)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8712755 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c8717246-8717043, c8716264-8716086, c8715654-8715567, c8715190-8715111, c8714925-8714863, c8714735-8714681, c8714521-8714381, c8714241-8714167, c8713961-8713860, c8713739-8713622, c8713426-8713390, c8713205-8713174, c8713012-8712968, c8712852-8712755, c8712415-8712334, c8712220-8712120, c8711979-8711864, c8711722-8711622, c8711502-8711413, c8711305-8711101, c8710947-8710830, c8710691-8710635, c8710514-8710392, c8710282-8710133, c8709901-8709866, c8709660-8709636, c8709504-8709470, c8709378-8709244, c8709044-8708964, c8708719-8708498)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 8930713 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:8920126-8920212, 8920411-8920547, 8920663-8920774, 8921006-8921104, 8921262-8921363, 8921559-8921628, 8921736-8921848, 8922101-8922196, 8924855-8925055, 8925140-8925283, 8925432-8925577, 8925760-8926005, 8926105-8926247, 8926389-8926563, 8926780-8926943, 8927184-8927308, 8927412-8927617, 8929203-8929383, 8929504-8929674, 8930151-8930367, 8930477-8930713, 8930915-8931080, 8931473-8931545, 8931702-8931916, 8932735-8932855, 8933061-8933192, 8933325-8933806)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 8930915 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:8920126-8920212, 8920411-8920547, 8920663-8920774, 8921006-8921104, 8921262-8921363, 8921559-8921628, 8921736-8921848, 8922101-8922196, 8924855-8925055, 8925140-8925283, 8925432-8925577, 8925760-8926005, 8926105-8926247, 8926389-8926563, 8926780-8926943, 8927184-8927308, 8927412-8927617, 8929203-8929383, 8929504-8929674, 8930151-8930367, 8930477-8930713, 8930915-8931080, 8931473-8931545, 8931702-8931916, 8932735-8932855, 8933061-8933192, 8933325-8933806)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9646464 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c9655297-9655279, c9653646-9653437, c9650908-9650783, c9650661-9650635, c9649349-9649323, c9649196-9647139, c9646908-9646759, c9646604-9646464, c9646114-9646058, c9645001-9644960, c9644813-9644769, c9644679-9644632, c9644445-9644395, c9644302-9644258, c9643995-9643942, c9643760-9643710, c9642821-9642636, c9642431-9642384, c9642230-9642195, c9641872-9641825, c9641740-9641687, c9641312-9641265, c9641038-9640994, c9640772-9640740, c9638323-9638276, c9637530-9637486, c9637383-9637360, c9635131-9635087, c9634930-9634782)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9725692 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:9722561-9722573, 9723176-9723364, 9724166-9724204, 9725630-9725692, 9725939-9726070, 9726302-9726324)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9831143 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c9831374-9831143, c9830319-9828194)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9879878 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:9879275-9879445, 9879749-9879878, 9879988-9880115, 9880202-9880277, 9880422-9880573, 9880732-9880862, 9881102-9881340, 9881683-9881940, 9882024-9882103, 9882265-9882405, 9882631-9882730, 9882820-9882913, 9883009-9883070, 9883209-9884055)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10656856 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c10657064-10656856, c10656093-10655931, c10655596-10655409, c10655218-10655068, c10654574-10654392, c10654305-10654168, c10654028-10653837, c10653557-10653251, c10652945-10652877, c10652240-10652107, c10651816-10651696, c10651482-10651274, c10650858-10650652, c10650546-10650418, c10650244-10649966, c10649752-10649660, c10648862-10648804, c10646965-10645601)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10777507 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c10781759-10781752, c10781164-10781061, c10780620-10780553, c10780255-10780165, c10779869-10779748, c10779568-10779452, c10779212-10779132, c10779037-10778938, c10778634-10778504, c10778412-10778321, c10778227-10778170, c10778009-10777907, c10777750-10777699, c10777589-10777507, c10777373-10777284, c10777195-10777129, c10777023-10775482)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10777373 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c10781759-10781752, c10781164-10781061, c10780620-10780553, c10780255-10780165, c10779869-10779748, c10779568-10779452, c10779212-10779132, c10779037-10778938, c10778634-10778504, c10778412-10778321, c10778227-10778170, c10778009-10777907, c10777750-10777699, c10777589-10777507, c10777373-10777284, c10777195-10777129, c10777023-10775482)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11142186 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c11148315-11148304, c11146319-11146233, c11145719-11145645, c11144773-11144704, c11144501-11144389, c11143790-11143710, c11142282-11142186, c11141941-11141906, c11141168-11141030, c11140814-11140730, c11140488-11140363, c11140227-11140110, c11139982-11139852, c11139748-11139645, c11139494-11139391, c11139299-11139222, c11138952-11138876, c11137763-11137674, c11137577-11137463, c11137204-11137113, c11136909-11136786)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11165646 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:11158142-11158150, 11158629-11158662, 11158862-11158998, 11159127-11159162, 11159998-11160118, 11160242-11160357, 11160463-11160556, 11160660-11160719, 11160833-11161300, 11161496-11161620, 11161828-11161926, 11163127-11163174, 11163918-11164050, 11165627-11165646, 11167144-11168782, 11170150-11170239, 11173058-11173170)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11167144 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:11158142-11158150, 11158629-11158662, 11158862-11158998, 11159127-11159162, 11159998-11160118, 11160242-11160357, 11160463-11160556, 11160660-11160719, 11160833-11161300, 11161496-11161620, 11161828-11161926, 11163127-11163174, 11163918-11164050, 11165627-11165646, 11167144-11168782, 11170150-11170239, 11173058-11173170)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11726247 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:11721720-11721962, 11722257-11723767, 11723897-11724128, 11724233-11724389, 11724592-11724680, 11724772-11724825, 11724940-11725042, 11725185-11725253, 11725342-11725408, 11725582-11725688, 11725814-11725874, 11726045-11726247, 11726384-11726428, 11726523-11726621, 11726876-11726940, 11727062-11727143, 11727534-11727682)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 11873074 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:11871621-11871792, 11872166-11872318, 11872410-11872501, 11872606-11872764, 11872908-11873074, 11873248-11873426, 11873639-11873809, 11873937-11874128, 11874245-11874304, 11874390-11874470, 11874732-11874971, 11875197-11875298, 11875439-11875687, 11875910-11876752)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 11873248 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:11871621-11871792, 11872166-11872318, 11872410-11872501, 11872606-11872764, 11872908-11873074, 11873248-11873426, 11873639-11873809, 11873937-11874128, 11874245-11874304, 11874390-11874470, 11874732-11874971, 11875197-11875298, 11875439-11875687, 11875910-11876752)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12038344 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:12038103-12038344, 12038767-12038895, 12039000-12039033, 12039794-12039987, 12040128-12040267, 12040380-12040496, 12040829-12040951, 12041005-12041097, 12041286-12041653, 12041768-12041856, 12041966-12042054, 12042246-12042314, 12042408-12042558, 12042665-12043458)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [lcl|scaffold_15:<12084012->12084591] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:<12088333-12088381, 12091186-12091329, 12091855-12091995, 12092135-12092317, 12092713-12092850, 12093182-12093367, 12093533-12093655, 12093944-12094126, 12094397-12094525, 12095445-12095549, 12095698-12096156, 12096384-12096466, 12096591-12096729, 12096935-12097051, 12097181-12097336, 12097477-12097677, 12097874-12097972, 12098293-12098475, 12098801-12098974, 12099147-12099281, 12100178-12100374, 12100613-12100748, 12101165-12101347, 12101927-12102076, 12102344-12102514, 12102763-12102918, 12103084-12103233, 12103467-12103637, 12103835-12103968, 12105008-12105215, 12105731-12105913, 12106203-12106316, 12106521-12106675, 12106786-12106933, 12107808-12107902, 12108726-12108957, 12109356-12109553, 12111212-12111337, 12112287-12112442, 12112723-12112765, 12113468-12113550)] [lcl|scaffold_15: delta, dna len= 16416864]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 12088333 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:<12088333-12088381, 12091186-12091329, 12091855-12091995, 12092135-12092317, 12092713-12092850, 12093182-12093367, 12093533-12093655, 12093944-12094126, 12094397-12094525, 12095445-12095549, 12095698-12096156, 12096384-12096466, 12096591-12096729, 12096935-12097051, 12097181-12097336, 12097477-12097677, 12097874-12097972, 12098293-12098475, 12098801-12098974, 12099147-12099281, 12100178-12100374, 12100613-12100748, 12101165-12101347, 12101927-12102076, 12102344-12102514, 12102763-12102918, 12103084-12103233, 12103467-12103637, 12103835-12103968, 12105008-12105215, 12105731-12105913, 12106203-12106316, 12106521-12106675, 12106786-12106933, 12107808-12107902, 12108726-12108957, 12109356-12109553, 12111212-12111337, 12112287-12112442, 12112723-12112765, 12113468-12113550)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12106675 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:<12088333-12088381, 12091186-12091329, 12091855-12091995, 12092135-12092317, 12092713-12092850, 12093182-12093367, 12093533-12093655, 12093944-12094126, 12094397-12094525, 12095445-12095549, 12095698-12096156, 12096384-12096466, 12096591-12096729, 12096935-12097051, 12097181-12097336, 12097477-12097677, 12097874-12097972, 12098293-12098475, 12098801-12098974, 12099147-12099281, 12100178-12100374, 12100613-12100748, 12101165-12101347, 12101927-12102076, 12102344-12102514, 12102763-12102918, 12103084-12103233, 12103467-12103637, 12103835-12103968, 12105008-12105215, 12105731-12105913, 12106203-12106316, 12106521-12106675, 12106786-12106933, 12107808-12107902, 12108726-12108957, 12109356-12109553, 12111212-12111337, 12112287-12112442, 12112723-12112765, 12113468-12113550)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12387830 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:12385057-12385229, 12385808-12385850, 12386160-12386465, 12386679-12386972, 12387191-12387464, 12387692-12387830, 12389281-12390062)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 12537193 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c12537298-12537193, c12537083-12536954, c12536582-12536449, c12536248-12536188, c12536082-12535987, c12535846-12535793, c12535445-12535340, c12535091-12534961, c12534118-12533933, c12533676-12533499, c12532990-12532929, c12532644-12531684)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 13561768 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c13566638-13566633, c13565700-13565599, c13565123-13564949, c13563033-13562834, c13561908-13561768, c13561445-13561253, c13560666-13560493, c13558873-13558743, c13558455-13558002, c13557906-13557152, c13556709-13556572, c13556357-13556224, c13556066-13555900, c13555603-13555404, c13554909-13553651)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14040868 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:14036800-14036941, 14037217-14037408, 14037647-14037823, 14037904-14038033, 14038119-14038246, 14038333-14038408, 14039073-14039224, 14039402-14039532, 14039626-14039870, 14040146-14040397, 14040521-14040600, 14040728-14040868, 14040990-14041089, 14041202-14041295, 14041446-14041507, 14042021-14043403)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 14438570 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:14437957-14437995, 14438388-14438570, 14438814-14439209)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15175558 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:15174210-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15188654-15188737, 15189129-15189219, 15189526-15190203)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15176770 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:15174210-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15188654-15188737, 15189129-15189219, 15189526-15190203)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15175558 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:15174210-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15184893-15185114, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15189526-15190203)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15176770 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:15174210-15174846, 15175465-15175558, 15175765-15175850, 15176722-15176770, 15176879-15177014, 15177256-15177347, 15177546-15177792, 15178937-15179043, 15179382-15179541, 15179702-15179862, 15180043-15180227, 15180460-15180529, 15180760-15180863, 15181966-15182152, 15182751-15182844, 15183040-15183134, 15183583-15183777, 15184420-15184588, 15184893-15185114, 15185471-15185538, 15185639-15185727, 15186060-15186138, 15186849-15187116, 15187808-15188078, 15189526-15190203)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15569501 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:15568318-15568380, 15568608-15568746, 15568868-15569501, 15569789-15570489)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 15919393 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:15912697-15912859, 15913402-15913495, 15913607-15913827, 15913911-15913968, 15914076-15914236, 15914413-15914595, 15914717-15914800, 15917292-15917539, 15917608-15917722, 15918309-15918398, 15918512-15918585, 15918704-15918854, 15918958-15919393, 15919563-15919861, 15920047-15920145, 15920356-15920403, 15920531-15921462)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 16358545 of lcl|scaffold_15 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:16358439-16358545, 16358641-16358754, 16358845-16358951, 16359081-16359188, 16360775-16360809, 16363682-16363860, 16363950-16364054, 16364152-16364293, 16364377-16364497, 16364607-16364706, 16364823-16364909, 16365032-16365222)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_15:c>16405055-16404869, c16404793-16403676)] [lcl|scaffold_15: delta, dna len= 16416864]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 394739 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c398669-398636, c396832-396770, c394809-394739, c393203-393162)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033825-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c462272-462200, c461948-461906, c461536-461439, c460823-460705, c460454-460283, c460008-459909, c459074-459062, c459032-458937, c458813-458663, c458391-458287, c458177-457959, c457654-457484, c457032-456947, c454867-454775, c454507-454416, c452654-452540, c451637-451508, c451184-451048)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033835-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c607715-607221, c606580-606414, c605764-605757, c604955-604884, c604397-604302, c604127-603987, c602896-602844)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033846-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 862307 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:858443-858535, 858945-859103, 859502-859654, 860269-860382, 860964-861131, 861683-861830, 862156-862307, 863279-863311)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033874-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 863279 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:858443-858535, 858945-859103, 859502-859654, 860269-860382, 860964-861131, 861683-861830, 862156-862307, 863279-863311)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033874-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:1085122-1085310, 1089617-1089668, 1089959-1090003, 1090217-1090320, 1090859-1090869, 1090961-1090981, 1091401-1091506, 1091967-1092039, 1092254-1092297, 1092389-1092446, 1092838-1092926, 1093086-1093259)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033914-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1134460 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c1138344-1138299, c1136295-1136234, c1134588-1134460, c1131477-1131379, c1130997-1130915, c1130356-1130230, c1129308-1129213, c1128681-1128559, c1127350-1127186, c1127052-1126927)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033921-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1132353 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c1132415-1132353, c1131477-1131379, c1130997-1130915, c1130356-1130230, c1129308-1129213, c1128681-1128559, c1127350-1127186, c1127052-1126927)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033921-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:1313973-1314133, 1316553-1316580, 1316646-1316667, 1317293-1317442, 1317992-1318195, 1318624-1318722, 1319386-1319546, 1320612-1320700, 1321027-1321162, 1321529-1321611, 1321891-1322029, 1322221-1322231, 1322349-1322396, 1322817-1322955, 1324762-1324848, 1325056-1325126, 1325335-1325395, 1325699-1325809, 1326074-1326183, 1326747-1326858, 1327297-1327464, 1327782-1328008, 1328723-1328813)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033939-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c1334880-1334689, c1334188-1334091, c1333985-1333796, c1333245-1333078, c1331385-1331378, c1329352-1329319, c1329049-1328939)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_033940-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:1686584-1686955, 1687090-1687482, 1687583-1687888, 1688334-1688460, 1689451-1689461, 1689777-1689869, 1690230-1690262, 1690874-1690965, 1691085-1691252, 1691457-1691531, 1692122-1692149, 1692376-1692498, 1692609-1692696, 1693228-1693315, 1693699-1693702)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034002-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c2229934-2229813, c2229655-2229395, c2229261-2229075, c2228932-2228787, c2228342-2228177, c2228062-2227966, c2227810-2227691, c2227243-2227125, c2227006-2226875, c2226687-2226577, c2226147-2226034, c2225651-2225606, c2222411-2222406, c2222250-2222189, c2221669-2221571, c2220241-2220077, c2219786-2219640, c2219432-2219370)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034042-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c2928422-2928345, c2927706-2927378, c2927186-2927177, c2926485-2925800, c2925226-2924944, c2924695-2924204, c2923223-2923196, c2922386-2921866)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034115-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:3892157-3892179, 3893249-3893414, 3893873-3893971, 3894307-3894477, 3894589-3894732, 3895049-3895216, 3895442-3895451, 3895677-3895861)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034198-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Coding region has multiple internal exons that are too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:4295078-4295092, 4295596-4295671, 4295865-4295903, 4296015-4296082, 4296205-4296276, 4296374-4296453, 4296586-4296664, 4297388-4297505, 4297864-4298039, 4298332-4298412, 4298839-4299003, 4300603-4300724, 4300855-4301074, 4301460-4301563, 4302858-4303071, 4303398-4303501, 4305643-4305653, 4306212-4306234, 4306444-4306604, 4306828-4306969, 4307193-4307343, 4307598-4307605, 4310032-4310160, 4310498-4310656, 4310989-4311072, 4311346-4311509, 4311656-4311698, 4312542-4312649, 4312902-4313010, 4313224-4313471, 4314929-4315141, 4316082-4316273, 4316592-4316769, 4317354-4317460, 4318240-4318311)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034234-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4481668 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c4496652-4496634, c4496228-4496128, c4495745-4495424, c4494734-4494655, c4494188-4494021, c4493314-4493195, c4492769-4492656, c4492422-4492350, c4490821-4490672, c4490551-4490488, c4490272-4490104, c4489802-4489620, c4489363-4489245, c4488765-4488609, c4488049-4487933, c4487735-4487666, c4484369-4484253, c4481784-4481668, c4479804-4479656, c4479313-4479161, c4478710-4478594, c4478375-4478288, c4478056-4477893, c4477776-4477711)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034255-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c4611379-4611305, c4611082-4611077, c4610755-4610655, c4610604-4610592)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034265-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c4813840-4813808, c4813223-4813163, c4812250-4812176, c4811976-4811963, c4811408-4811384, c4808930-4808899)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034283-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5345518 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c5347429-5347427, c5347162-5347043, c5346912-5346856, c5346749-5346686, c5346513-5346467, c5346300-5346218, c5346127-5346029, c5345860-5345725, c5345571-5345518, c5345208-5345053)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034342-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6182873 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:6179285-6179881, 6180149-6180244, 6180415-6180648, 6180803-6180971, 6181941-6182012, 6182113-6182154, 6182471-6182557, 6182814-6182873, 6182989-6183521)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034437-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6723890 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:6721075-6721221, 6721690-6721803, 6721901-6721957, 6722124-6722272, 6722645-6722702, 6722823-6722964, 6723147-6723347, 6723569-6723645, 6723767-6723890, 6724024-6724115, 6724249-6724314, 6724443-6724627, 6724810-6724935, 6725045-6725281, 6725536-6725614, 6725751-6725843, 6725988-6726095, 6726318-6726431)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034494-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6742615 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:<6741338-6741699, 6741810-6741941, 6742534-6742615, 6743062-6743170, 6743400-6743693, 6743855-6745652, 6746455-6746579, 6746912-6747040, 6747395-6747545, 6747859-6747898, 6748006-6748240, 6748440-6748595, 6750771-6751013, 6751192-6751418, 6751733-6751955, 6752060-6752457, 6752749-6752910, 6753587-6753669, 6754713-6754938, 6755074-6755402, 6755877-6756054)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034498-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6743062 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:<6741338-6741699, 6741810-6741941, 6742534-6742615, 6743062-6743170, 6743400-6743693, 6743855-6745652, 6746455-6746579, 6746912-6747040, 6747395-6747545, 6747859-6747898, 6748006-6748240, 6748440-6748595, 6750771-6751013, 6751192-6751418, 6751733-6751955, 6752060-6752457, 6752749-6752910, 6753587-6753669, 6754713-6754938, 6755074-6755402, 6755877-6756054)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034498-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c7524770-7524755, c7523198-7523063, c7522597-7522590, c7522509-7522347, c7519920-7519809, c7518205-7518102, c7517247-7517202, c7516236-7516133, c7516068-7515813)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034587-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c7822383-7822204, c7821902-7821796, c7821749-7821612, c7821517-7821481, c7821383-7821244, c7821163-7820413, c7818604-7818594, c7818363-7818246, c7816301-7816177, c7815783-7815699, c7815169-7814990, c7814714-7814546, c7814205-7814042, c7813337-7813215)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034629-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:8290358-8290834, 8291307-8291389, 8291639-8291795, 8291955-8292116, 8292346-8292471, 8293197-8293417, 8293590-8293603, 8293727-8293770)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034692-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8391153 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c8402924-8402795, c8402403-8402236, c8401217-8401080, c8400974-8400820, c8394769-8394624, c8394495-8394377, c8393794-8393670, c8393534-8393437, c8393035-8392908, c8392536-8392412, c8391978-8391833, c8391636-8391534, c8391295-8391153, c8390923-8390815)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034703-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9095364 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:9083737-9083784, 9084360-9084554, 9084919-9085027, 9085189-9085337, 9085745-9085865, 9088542-9088687, 9088900-9089113, 9089497-9089691, 9090705-9090814, 9091255-9091398, 9091899-9091974, 9092229-9092364, 9093040-9093121, 9093721-9093797, 9093940-9094015, 9094184-9094275, 9094558-9094734, 9095066-9095128, 9095288-9095364, 9095688-9095830, 9096160-9096267, 9096371-9096451, 9096756-9096959)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034789-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c9457321-9457257, c9457110-9457097, c9456867-9456621, c9455886-9455679, c9455345-9455204, c9453948-9453787, c9452698-9452639, c9452547-9452474, c9452260-9451938, c9451584-9451532, c9450307-9450212, c9450056-9449996, c9449675-9449572, c9449465-9449363, c9448663-9448475, c9448319-9448219, c9447775-9447628, c9447306-9447259, c9446190-9445884)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034824-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9525348 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:9520656-9520686, 9520787-9520930, 9521163-9521258, 9521403-9521521, 9521772-9521924, 9522092-9522265, 9522509-9522682, 9522913-9523027, 9523216-9523409, 9523616-9523737, 9523851-9523920, 9524122-9524282, 9524538-9524646, 9524827-9524958, 9525142-9525348, 9525513-9525650, 9525819-9525942, 9526096-9526267, 9526448-9526660, 9526893-9527037, 9527301-9527507, 9527669-9527773, 9527926-9528078, 9528352-9528600, 9528782-9528994, 9529278-9529490, 9529632-9529793, 9529954-9530082, 9530189-9530277, 9530408-9530531, 9530721-9530929, 9531315-9531423, 9531894-9532066, 9533452-9533587)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034833-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9525348 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:9520656-9520686, 9520787-9520930, 9521163-9521258, 9521403-9521521, 9521772-9521924, 9522092-9522265, 9522509-9522682, 9522913-9523027, 9523216-9523409, 9523616-9523737, 9523851-9523920, 9524122-9524282, 9524538-9524646, 9524827-9524958, 9525142-9525348, 9525513-9525650, 9525819-9525942, 9526096-9526267, 9526448-9526660, 9526893-9527037, 9527301-9527507, 9527669-9527773, 9527926-9528078, 9528352-9528600, 9528782-9528994, 9529278-9529490, 9529632-9529793, 9529954-9530082, 9530189-9530277, 9530408-9530531, 9530721-9530929, 9531315-9531423, 9531894-9532066, 9532630-9532654)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034833-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9827350 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c9827433-9827350, c9827138-9827039, c9826806-9826708, c9826505-9826396, c9826300-9826271, c9826187-9826099, c9826014-9825848, c9825686-9825624, c9825447-9825335)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034878-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9827350 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c9827433-9827350, c9827138-9827039, c9826806-9826708, c9826505-9826396, c9826300-9826271, c9826187-9826099, c9826014-9825848, c9825686-9825598)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034878-T2]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9830807 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c9830890-9830807, c9830595-9830496, c9830265-9830167, c9829962-9829853, c9829761-9829732, c9829647-9829559, c9829474-9829308, c9829146-9829084, c9828907-9828795)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034879-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:9966443-9966490, 9968417-9968527, 9969246-9969260, 9969980-9970195, 9970763-9970835, 9971425-9971561, 9971803-9971952, 9973446-9973591, 9973799-9973931, 9974485-9974655)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034897-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10028311 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:10028287-10028311, 10029808-10029897, 10030404-10030462)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034904-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:10126208-10126378, 10127994-10128113, 10129353-10129436, 10129764-10129805, 10131280-10131362, 10131681-10131754, 10132069-10132189, 10132387-10132433, 10132650-10132661, 10132772-10132798, 10133162-10133262)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034917-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10301133 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:10291363-10292770, 10293916-10294043, 10295652-10295840, 10297889-10298063, 10298275-10298378, 10299797-10299954, 10300554-10301133, 10302357-10302631, 10304134-10304376, 10307499-10307642, 10308944-10309038, 10309321-10309412, 10311399-10311799, 10313363-10313545, 10315403-10315511, 10317065-10317296, 10318480-10318611, 10321359-10321412, 10321820-10321937, 10322300-10322381, 10322878-10323024)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034938-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10453052 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c10456752-10456737, c10456547-10456501, c10455814-10455616, c10454703-10454549, c10454266-10454134, c10453757-10453601, c10453175-10453052, c10452936-10452747, c10452206-10452046)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034947-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10562585 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c10570650-10570543, c10570123-10570041, c10569903-10569789, c10569650-10569585, c10568569-10568451, c10567815-10567714, c10567504-10567378, c10567188-10566984, c10566714-10566570, c10565416-10565231, c10565050-10564986, c10564326-10564239, c10564096-10564027, c10562804-10562585, c10562259-10562169, c10561988-10561875, c10561551-10561439, c10561111-10560978)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034963-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10562259 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c10570650-10570543, c10570123-10570041, c10569903-10569789, c10569650-10569585, c10568569-10568451, c10567815-10567714, c10567504-10567378, c10567188-10566984, c10566714-10566570, c10565416-10565231, c10565050-10564986, c10564326-10564239, c10564096-10564027, c10562804-10562585, c10562259-10562169, c10561988-10561875, c10561551-10561439, c10561111-10560978)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034963-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10819903 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c10821738-10821679, c10820637-10820618, c10819993-10819903, c10818868-10818823, c10818696-10818403, c10815474-10815355, c10815171-10815052, c10814880-10814757, c10814243-10814051, c10813019-10812858)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034983-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11075806 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:11074775-11074898, 11075760-11075806, 11076126-11076207, 11076734-11076876, 11077135-11077179)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_034998-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11487319 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:11482477-11482530, 11483460-11484197, 11484544-11484759, 11484909-11485200, 11487136-11487319, 11489892-11490085, 11490325-11490425)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035036-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11593424 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c11613348-11613242, c11612161-11612069, c11611524-11611389, c11608568-11608414, c11607967-11607875, c11606881-11606793, c11606655-11606611, c11605929-11605765, c11605672-11605511, c11604542-11604401, c11603791-11603592, c11603451-11603398, c11601043-11600916, c11600742-11600559, c11599628-11599454, c11599272-11599151, c11598758-11598571, c11598478-11598352, c11598272-11598094, c11597941-11597827, c11597677-11597518, c11597424-11597318, c11597241-11597197, c11597105-11596969, c11596639-11596495, c11596132-11596073, c11595992-11595925, c11595772-11595659, c11594339-11594252, c11594166-11594128, c11593854-11593749, c11593587-11593424, c11593208-11593172, c11593075-11593053, c11592953-11592898, c11591607-11591104)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035047-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11691029 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c11699964-11699834, c11699705-11699590, c11699495-11699392, c11699027-11698923, c11698546-11698415, c11698151-11697981, c11697350-11697195, c11695981-11695911, c11695578-11695431, c11695105-11694955, c11694302-11694139, c11693908-11693817, c11692994-11692837, c11691123-11691029, c11690808-11690584, c11690323-11690201, c11690066-11689967, c11689746-11689504, c11688575-11688442, c11688337-11688179, c11688048-11687913, c11687764-11687646, c11687494-11687414, c11687322-11687258, c11685826-11685738, c11685567-11685431)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035058-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11883083 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:11873347-11873371, 11873722-11873873, 11876475-11876648, 11877867-11877958, 11878749-11878864, 11878979-11879091, 11879372-11879559, 11879684-11879801, 11880056-11880214, 11880613-11880915, 11881246-11881399, 11881641-11882511, 11882946-11883083, 11883325-11884081, 11884295-11884497, 11884659-11884749, 11884970-11885116, 11885412-11885675, 11886144-11886368, 11886493-11886582, 11886777-11887055, 11887376-11887506, 11887959-11888163, 11888530-11888904, 11889202-11889446, 11889845-11889983, 11890071-11890155, 11890821-11891017, 11891257-11891357, 11891553-11891604, 11892175-11892386, 11893413-11893586, 11893689-11893731, 11894296-11894520)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035068-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11891357 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:11873347-11873371, 11873722-11873873, 11876475-11876648, 11877867-11877958, 11878749-11878864, 11878979-11879091, 11879372-11879559, 11879684-11879801, 11880056-11880214, 11880613-11880915, 11881246-11881399, 11881641-11882511, 11882946-11883083, 11883325-11884081, 11884295-11884497, 11884659-11884749, 11884970-11885116, 11885412-11885675, 11886144-11886368, 11886493-11886582, 11886777-11887055, 11887376-11887506, 11887959-11888163, 11888530-11888904, 11889202-11889446, 11889845-11889983, 11890071-11890155, 11890821-11891017, 11891257-11891357, 11891553-11891604, 11892175-11892386, 11893413-11893586, 11893689-11893731, 11894296-11894520)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035068-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11942685 of lcl|scaffold_20 FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c11945323-11945222, c11944813-11944696, c11944246-11944135, c11942854-11942685, c11942420-11942315, c11942191-11941822, c11941564-11941349)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035071-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c11957040-11956795, c11955641-11955572, c11953114-11952996, c11952888-11952755, c11952477-11952309, c11951504-11951421, c11951322-11951237, c11951025-11950951, c11950864-11950704, c11950416-11950247, c11949942-11949931, c11949750-11949539, c11949345-11949306, c11949215-11949150, c11948775-11948718, c11948482-11948418, c11947953-11947885, c11947728-11947650, c11947392-11947279, c11947175-11947117, c11946918-11946892)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035072-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_20:c11968893-11968657, c11967998-11967929, c11966504-11966386, c11966147-11966014, c11965807-11965639, c11965458-11965375, c11965041-11964956, c11964845-11964777, c11964568-11964408, c11963905-11963736, c11963619-11963608, c11963293-11963082, c11962825-11962789, c11962607-11962542, c11962084-11962027, c11961933-11961869, c11961741-11961673, c11961052-11960974, c11960673-11960557, c11960160-11960102, c11959981-11959958)] [lcl|scaffold_20: delta, dna len= 12182972] -> [gnl|ncbi|FUN_035073-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 324511 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c324637-324511, c324240-324149, c323524-323454, c323187-323008, c322420-322313, c321894-321736)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 394739 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c398669-398636, c396832-396770, c394809-394739, c393203-393162)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 862307 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:858429-858535, 858945-859103, 859502-859654, 860269-860382, 860964-861131, 861683-861830, 862156-862307, 863279-864284)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 863279 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:858429-858535, 858945-859103, 859502-859654, 860269-860382, 860964-861131, 861683-861830, 862156-862307, 863279-864284)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1134460 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c1138915-1138299, c1136295-1136234, c1134588-1134460, c1131477-1131379, c1130997-1130915, c1130356-1130230, c1129308-1129213, c1128681-1128559, c1127350-1127186, c1127052-1126751)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1132353 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c1132469-1132353, c1131477-1131379, c1130997-1130915, c1130356-1130230, c1129308-1129213, c1128681-1128559, c1127350-1127186, c1127052-1126751)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2559965 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c2562125-2562038, c2560763-2560630, c2560207-2559965, c2559885-2559877)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4481668 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c4496766-4496634, c4496228-4496128, c4495745-4495424, c4494734-4494655, c4494188-4494021, c4493314-4493195, c4492769-4492656, c4492422-4492350, c4490821-4490672, c4490551-4490488, c4490272-4490104, c4489802-4489620, c4489363-4489245, c4488765-4488609, c4488049-4487933, c4487735-4487666, c4484369-4484253, c4481784-4481668, c4479804-4479656, c4479313-4479161, c4478710-4478594, c4478375-4478288, c4478056-4477893, c4477776-4475465)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5345518 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c5347520-5347427, c5347162-5347043, c5346912-5346856, c5346749-5346686, c5346513-5346467, c5346300-5346218, c5346127-5346029, c5345860-5345725, c5345571-5345518, c5345208-5344798)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6182873 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:6178966-6178995, 6179262-6179881, 6180149-6180244, 6180415-6180648, 6180803-6180971, 6181941-6182012, 6182113-6182154, 6182471-6182557, 6182814-6182873, 6182989-6186048)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6723890 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:6721075-6721221, 6721690-6721803, 6721901-6721957, 6722124-6722272, 6722645-6722702, 6722823-6722964, 6723147-6723347, 6723569-6723645, 6723767-6723890, 6724024-6724115, 6724249-6724314, 6724443-6724627, 6724810-6724935, 6725045-6725281, 6725536-6725614, 6725751-6725843, 6725988-6726095, 6726318-6726902)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 6742615 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:<6741338-6741699, 6741810-6741941, 6742534-6742615, 6743062-6743170, 6743400-6743693, 6743855-6745652, 6746455-6746579, 6746912-6747040, 6747395-6747545, 6747859-6747898, 6748006-6748240, 6748440-6748595, 6750771-6751013, 6751192-6751418, 6751733-6751955, 6752060-6752457, 6752749-6752910, 6753587-6753669, 6754713-6754938, 6755074-6755402, 6755877-6756054)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 6743062 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:<6741338-6741699, 6741810-6741941, 6742534-6742615, 6743062-6743170, 6743400-6743693, 6743855-6745652, 6746455-6746579, 6746912-6747040, 6747395-6747545, 6747859-6747898, 6748006-6748240, 6748440-6748595, 6750771-6751013, 6751192-6751418, 6751733-6751955, 6752060-6752457, 6752749-6752910, 6753587-6753669, 6754713-6754938, 6755074-6755402, 6755877-6756054)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8391153 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c8402924-8402795, c8402403-8402236, c8401217-8401080, c8400974-8400820, c8394769-8394624, c8394495-8394377, c8393794-8393670, c8393534-8393437, c8393035-8392908, c8392536-8392412, c8391978-8391833, c8391636-8391534, c8391295-8391153, c8390923-8390815)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9095364 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:9083737-9083784, 9084360-9084554, 9084919-9085027, 9085189-9085337, 9085745-9085865, 9088542-9088687, 9088900-9089113, 9089497-9089691, 9090705-9090814, 9091255-9091398, 9091899-9091974, 9092229-9092364, 9093040-9093121, 9093721-9093797, 9093940-9094015, 9094184-9094275, 9094558-9094734, 9095066-9095128, 9095288-9095364, 9095688-9095830, 9096160-9096267, 9096371-9096451, 9096756-9096961)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9525348 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:9520613-9520686, 9520787-9520930, 9521163-9521258, 9521403-9521521, 9521772-9521924, 9522092-9522265, 9522509-9522682, 9522913-9523027, 9523216-9523409, 9523616-9523737, 9523851-9523920, 9524122-9524282, 9524538-9524646, 9524827-9524958, 9525142-9525348, 9525513-9525650, 9525819-9525942, 9526096-9526267, 9526448-9526660, 9526893-9527037, 9527301-9527507, 9527669-9527773, 9527926-9528078, 9528352-9528600, 9528782-9528994, 9529278-9529490, 9529632-9529793, 9529954-9530082, 9530189-9530277, 9530408-9530531, 9530721-9530929, 9531315-9531423, 9531894-9532066, 9533452-9534653)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9525348 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:9520613-9520686, 9520787-9520930, 9521163-9521258, 9521403-9521521, 9521772-9521924, 9522092-9522265, 9522509-9522682, 9522913-9523027, 9523216-9523409, 9523616-9523737, 9523851-9523920, 9524122-9524282, 9524538-9524646, 9524827-9524958, 9525142-9525348, 9525513-9525650, 9525819-9525942, 9526096-9526267, 9526448-9526660, 9526893-9527037, 9527301-9527507, 9527669-9527773, 9527926-9528078, 9528352-9528600, 9528782-9528994, 9529278-9529490, 9529632-9529793, 9529954-9530082, 9530189-9530277, 9530408-9530531, 9530721-9530929, 9531315-9531423, 9531894-9532066, 9532630-9532662, 9533452-9534653)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9827350 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c9827469-9827350, c9827138-9827039, c9826806-9826708, c9826505-9826396, c9826300-9826271, c9826187-9826099, c9826014-9825848, c9825686-9825624, c9825447-9825144)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9827350 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c9827469-9827350, c9827138-9827039, c9826806-9826708, c9826505-9826396, c9826300-9826271, c9826187-9826099, c9826014-9825848, c9825686-9825144)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9830807 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c9830890-9830807, c9830595-9830496, c9830265-9830167, c9829962-9829853, c9829761-9829732, c9829647-9829559, c9829474-9829308, c9829146-9829084, c9828907-9828731)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10028311 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:10028252-10028311, 10029808-10029897, 10030404-10030506, 10033448-10034229)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10301133 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:10291363-10292770, 10293916-10294043, 10295652-10295840, 10297889-10298063, 10298275-10298378, 10299797-10299954, 10300554-10301133, 10302357-10302631, 10304134-10304376, 10307499-10307642, 10308944-10309038, 10309321-10309412, 10311399-10311799, 10313363-10313545, 10315403-10315511, 10317065-10317296, 10318480-10318611, 10321359-10321412, 10321820-10321937, 10322300-10322381, 10322878-10324513)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10453052 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c10456851-10456737, c10456547-10456501, c10455814-10455616, c10454703-10454549, c10454266-10454134, c10453757-10453601, c10453175-10453052, c10452936-10452747, c10452206-10451628)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10562585 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c10570935-10570543, c10570123-10570041, c10569903-10569789, c10569650-10569585, c10568569-10568451, c10567815-10567714, c10567504-10567378, c10567188-10566984, c10566714-10566570, c10565416-10565231, c10565050-10564986, c10564326-10564239, c10564096-10564027, c10562804-10562585, c10562259-10562169, c10561988-10561875, c10561551-10561439, c10561111-10560641)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 10562259 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c10570935-10570543, c10570123-10570041, c10569903-10569789, c10569650-10569585, c10568569-10568451, c10567815-10567714, c10567504-10567378, c10567188-10566984, c10566714-10566570, c10565416-10565231, c10565050-10564986, c10564326-10564239, c10564096-10564027, c10562804-10562585, c10562259-10562169, c10561988-10561875, c10561551-10561439, c10561111-10560641)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 10819903 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c10821738-10821679, c10820637-10820618, c10819993-10819903, c10818868-10818823, c10818696-10818403, c10815474-10815355, c10815171-10815052, c10814880-10814757, c10814243-10814051, c10813019-10812858)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11075806 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:11074775-11074898, 11075760-11075806, 11076126-11076207, 11076734-11076876, 11077135-11077179)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11487319 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:11482477-11482530, 11483460-11484197, 11484544-11484759, 11484909-11485200, 11487136-11487319, 11489892-11490085, 11490325-11492552)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11593424 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c11613348-11613242, c11612161-11612069, c11611524-11611389, c11608568-11608414, c11607967-11607875, c11606881-11606793, c11606655-11606611, c11605929-11605765, c11605672-11605511, c11604542-11604401, c11603791-11603592, c11603451-11603398, c11601043-11600916, c11600742-11600559, c11599628-11599454, c11599272-11599151, c11598758-11598571, c11598478-11598352, c11598272-11598094, c11597941-11597827, c11597677-11597518, c11597424-11597318, c11597241-11597197, c11597105-11596969, c11596639-11596495, c11596132-11596073, c11595992-11595925, c11595772-11595659, c11594339-11594252, c11594166-11594128, c11593854-11593749, c11593587-11593424, c11593208-11593172, c11593075-11593053, c11592953-11592898, c11591607-11591104)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11691029 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c11700084-11699834, c11699705-11699590, c11699495-11699392, c11699027-11698923, c11698546-11698415, c11698151-11697981, c11697350-11697195, c11695981-11695911, c11695578-11695431, c11695105-11694955, c11694302-11694139, c11693908-11693817, c11692994-11692837, c11691123-11691029, c11690808-11690584, c11690323-11690201, c11690066-11689967, c11689746-11689504, c11688575-11688442, c11688337-11688179, c11688048-11687913, c11687764-11687646, c11687494-11687414, c11687322-11687258, c11685826-11685738, c11685567-11685347)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11883083 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:11873347-11873371, 11873722-11873873, 11876475-11876648, 11877867-11877958, 11878749-11878864, 11878979-11879091, 11879372-11879559, 11879684-11879801, 11880056-11880214, 11880613-11880915, 11881246-11881399, 11881641-11882511, 11882946-11883083, 11883325-11884081, 11884295-11884497, 11884659-11884749, 11884970-11885116, 11885412-11885675, 11886144-11886368, 11886493-11886582, 11886777-11887055, 11887376-11887506, 11887959-11888163, 11888530-11888904, 11889202-11889446, 11889845-11889983, 11890071-11890155, 11890821-11891017, 11891257-11891357, 11891553-11891604, 11892175-11892386, 11893413-11893586, 11893689-11893731, 11894296-11895733)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11891357 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:11873347-11873371, 11873722-11873873, 11876475-11876648, 11877867-11877958, 11878749-11878864, 11878979-11879091, 11879372-11879559, 11879684-11879801, 11880056-11880214, 11880613-11880915, 11881246-11881399, 11881641-11882511, 11882946-11883083, 11883325-11884081, 11884295-11884497, 11884659-11884749, 11884970-11885116, 11885412-11885675, 11886144-11886368, 11886493-11886582, 11886777-11887055, 11887376-11887506, 11887959-11888163, 11888530-11888904, 11889202-11889446, 11889845-11889983, 11890071-11890155, 11890821-11891017, 11891257-11891357, 11891553-11891604, 11892175-11892386, 11893413-11893586, 11893689-11893731, 11894296-11895733)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11924840 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:11924728-11924840, 11925166-11925326, 11925832-11925943, 11926140-11926315, 11927294-11927486, 11927754-11927893, 11928670-11928794, 11929379-11929583, 11930141-11930345, 11930888-11931028, 11931278-11931442, 11932126-11932266, 11932426-11933128)] [lcl|scaffold_20: delta, dna len= 12182972]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 11942685 of lcl|scaffold_20 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_20:c11945337-11945222, c11944813-11944696, c11944246-11944135, c11942854-11942685, c11942420-11942315, c11942191-11941822, c11941564-11941345, c11939840-11939158)] [lcl|scaffold_20: delta, dna len= 12182972]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 220309 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:219045-219523, 220226-220309, 221918-222007, 223025-223294, 223725-223852, 224709-224766, 229046-229083, 229142-229193, 229218-229329)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_039993-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 221918 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:219045-219523, 220226-220309, 221918-222007, 223025-223294, 223725-223852, 224709-224766, 229046-229083, 229142-229193, 229218-229329)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_039993-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c706240-706174, c704237-703923, c703031-703026, c702635-702460, c702057-701969, c701939-701819, c701418-701124, c699063-698900, c698168-698124)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040051-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 779178 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c783047-782789, c782437-782115, c781136-780903, c780796-780699, c780317-780241, c779276-779178, c778800-778712, c778569-778423)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040059-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1859072 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c1864630-1864385, c1862822-1862660, c1861254-1861111, c1860981-1860856, c1860699-1860481, c1860017-1859912, c1859626-1859511, c1859207-1859072, c1858859-1858676, c1858150-1858016, c1856336-1856247)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040138-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:2157023-2157184, 2159843-2159935, 2162872-2162886, 2165786-2166001)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040157-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2675452 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:2674104-2674233, 2674473-2674632, 2674777-2674898, 2675367-2675452, 2675851-2675961, 2676117-2676223, 2676643-2676669, 2676865-2676956, 2677111-2677159, 2677280-2677325)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040203-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3086849 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c3116780-3115623, c3114276-3114139, c3113502-3113383, c3113074-3112982, c3112623-3112414, c3112275-3112117, c3111908-3111810, c3111553-3111416, c3111217-3111038, c3110621-3110427, c3109975-3109712, c3109107-3108990, c3106838-3106732, c3106570-3106392, c3106278-3105972, c3105859-3105679, c3104976-3104860, c3104746-3104305, c3102923-3102688, c3099198-3098829, c3097157-3096910, c3095836-3095696, c3095413-3095210, c3092288-3092001, c3091492-3091361, c3089450-3089331, c3089037-3088848, c3088315-3088068, c3087958-3087863, c3087042-3086849, c3086685-3086542, c3086231-3086093, c3085171-3085125, c3084750-3084657, c3084204-3084059)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040229-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c3129710-3129561, c3129253-3129239, c3128980-3128894)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040231-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3261198 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c3267147-3267087, c3266999-3266937, c3266658-3266545, c3265033-3264969, c3264704-3264548, c3264343-3264223, c3264053-3263974, c3263606-3263363, c3263230-3263018, c3262459-3262269, c3262046-3261968, c3261598-3261435, c3261263-3261198, c3260931-3260805, c3260361-3260160)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040240-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3520568 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3518827-3519187, 3519489-3519593, 3519741-3519932, 3520068-3520262, 3520380-3520568, 3520662-3520847, 3521056-3521265, 3521375-3521563, 3521675-3521794, 3521910-3521931, 3522059-3522119)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040261-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3686391 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3685718-3685752, 3686353-3686391, 3686503-3686616, 3686779-3686859, 3686988-3687106, 3688250-3688323, 3688390-3688466, 3688581-3688654, 3688839-3689027, 3689190-3689356, 3689482-3689559, 3689653-3689727, 3690047-3690175, 3690449-3690487)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040287-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3690175 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3685718-3685752, 3686353-3686391, 3686503-3686616, 3686779-3686859, 3686988-3687106, 3688250-3688323, 3688390-3688466, 3688581-3688654, 3688839-3689027, 3689190-3689356, 3689482-3689559, 3689653-3689727, 3690047-3690175, 3690449-3690487)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040287-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3690175 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3688051-3688060, 3688250-3688323, 3688390-3688466, 3688581-3688654, 3688839-3689027, 3689190-3689356, 3689482-3689559, 3689653-3689727, 3690047-3690175, 3690449-3690487)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040287-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3761700-3761709, 3761886-3761896, 3762069-3762242)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040302-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c3809546-3809443, c3808632-3808456, c3807505-3807396, c3806974-3806857, c3805722-3805558, c3805508-3805419, c3805040-3804873, c3804558-3804478, c3804314-3804218, c3804206-3804106, c3804061-3803894, c3803669-3803660, c3803610-3803479)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040308-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3873365-3873536, 3873806-3874089, 3874592-3874747, 3875616-3875765, 3876308-3876487, 3877753-3878034, 3878891->3879042)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040317-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3879042 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:3873365-3873536, 3873806-3874089, 3874592-3874747, 3875616-3875765, 3876308-3876487, 3877753-3878034, 3878891->3879042)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040317-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c>4604458-4604425, c4604269-4604161, c4603986-4603952, c4603702-4603593, c4603146-4603056, c4602939-4602863, c4602707-4602671, c4602505-4602408, c4602130-4602005, c4601887-4601730, c4601428-4601293, c4601138-4600989, c4600851-4600761, c4599967-4599870, c4599582-4599448, c4599323-4599201, c4599094-4598928, c4598619-4598484, c4597729-4597403)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040412-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4604458 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c>4604458-4604425, c4604269-4604161, c4603986-4603952, c4603702-4603593, c4603146-4603056, c4602939-4602863, c4602707-4602671, c4602505-4602408, c4602130-4602005, c4601887-4601730, c4601428-4601293, c4601138-4600989, c4600851-4600761, c4599967-4599870, c4599582-4599448, c4599323-4599201, c4599094-4598928, c4598619-4598484, c4597729-4597403)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040412-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4759767 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:4757116-4757225, 4757354-4757430, 4757708-4757748, 4759732-4759767, 4760085-4760141, 4761036-4761122, 4761642-4761671)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040428-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4818694 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:4818617-4818694, 4818896-4819099, 4819199-4819319, 4819397-4819449, 4819668-4819734, 4819907-4820122, 4820218-4820350, 4820566-4820578)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040436-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4818694 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:4818617-4818694, 4818896-4819099, 4819199-4819319, 4819397-4819449, 4819668-4819734, 4819907-4820122, 4820218-4820350, 4820535-4820541)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040436-T2]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:4826876-4827061, 4827255-4827378, 4827454-4827524, 4827629-4827683, 4828136-4828162, 4828626-4828824, 4829932-4830045, 4831218-4831943, 4832126-4832210, 4833106-4833152, 4833228-4833306, 4833412-4833417, 4833566-4833640, 4833874-4834093, 4834291-4834518, 4834631-4834772, 4835069-4835238, 4835553-4835668, 4835976-4836139, 4836302-4836455, 4836640-4836708, 4836820-4836909, 4837161-4837295, 4837396-4837529, 4837822-4837907, 4838021-4838147, 4838235-4838331, 4838977-4839120, 4839266-4839343, 4839470-4839547, 4839794-4839882, 4840031-4840177, 4840495-4840618, 4844805-4844861, 4844945-4845025, 4845115-4845262, 4845967-4846023, 4846561-4846610)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040437-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c4957665-4957663, c4956849-4956843, c4956020-4955728)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040454-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5096560 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c5101811-5101766, c5100963-5100914, c5100780-5100699, c5100596-5100520, c5100373-5100301, c5100180-5100080, c5099501-5099356, c5099047-5098954, c5098802-5098678, c5098520-5098422, c5098150-5098093, c5097979-5097914, c5097601-5097521, c5097416-5097281, c5096669-5096560, c5096428-5096330, c5095402-5095317, c5094939-5094791, c5094471-5094365)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040467-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5998418 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c6029306-6029165, c6028700-6028434, c6028060-6027794, c6027635-6027366, c6027190-6026924, c6026389-6026114, c6026005-6025739, c6025412-6025146, c6024941-6024675, c6024567-6024301, c6024167-6023901, c6023643-6023377, c6023208-6022942, c6022732-6022463, c6022255-6021977, c6021668-6021411, c6021107-6020841, c6020374-6020108, c6019600-6019334, c6016449-6016183, c6015685-6015416, c6014948-6014682, c6014224-6013958, c6013776-6011809, c6011629-6011551, c6011447-6011365, c6011001-6010889, c6010775-6010575, c6010464-6010382, c6010199-6010026, c6009875-6009716, c6009602-6009519, c6008866-6008702, c6008339-6008181, c6008010-6007833, c6007490-6007377, c6007163-6006935, c6006396-6006267, c6006086-6005993, c6004492-6004384, c6004277-6004153, c6003835-6003723, c6003638-6003470, c60031...] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040580-T1]
WARNING: valid [SEQ_FEAT.CDSmRNArange] mRNA overlaps or contains CDS but does not completely contain intervals FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c6029306-6029165, c6028700-6028434, c6028060-6027794, c6027635-6027366, c6027190-6026924, c6026389-6026114, c6026005-6025739, c6025412-6025146, c6024941-6024675, c6024567-6024301, c6024167-6023901, c6023643-6023377, c6023208-6022942, c6022732-6022463, c6022255-6021977, c6021668-6021411, c6021107-6020841, c6020374-6020108, c6019600-6019334, c6016449-6016183, c6015685-6015416, c6014948-6014682, c6014224-6013958, c6013776-6011809, c6011629-6011551, c6011447-6011365, c6011001-6010889, c6010775-6010575, c6010464-6010382, c6010199-6010026, c6009875-6009716, c6009602-6009519, c6008866-6008702, c6008339-6008181, c6008010-6007833, c6007490-6007377, c6007163-6006935, c6006396-6006267, c6006086-6005993, c6004492-6004384, c6004277-6004153, c6003835-6003723, c6003638-6003470, c60031...] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040580-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6176010 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:6168655-6168683, 6169808-6170132, 6171429-6171525, 6171699-6171806, 6173165-6173218, 6175922-6176010, 6177600-6177833, 6179194-6179247, 6179354-6179458, 6179571-6179657, 6179842-6179955, 6180168-6180248, 6180352-6180426, 6180938-6181009, 6181153-6181252, 6181588-6181718, 6182010-6182082, 6182171-6182243, 6182671-6182786, 6184455-6184519, 6184812-6184888, 6186260-6186425, 6186758-6186910, 6187280-6187388, 6187740-6187819, 6188440-6188580, 6188782-6188898, 6188995-6189088, 6189171-6189251, 6190904-6191085)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040596-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6184888 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:6168655-6168683, 6169808-6170132, 6171429-6171525, 6171699-6171806, 6173165-6173218, 6175922-6176010, 6177600-6177833, 6179194-6179247, 6179354-6179458, 6179571-6179657, 6179842-6179955, 6180168-6180248, 6180352-6180426, 6180938-6181009, 6181153-6181252, 6181588-6181718, 6182010-6182082, 6182171-6182243, 6182671-6182786, 6184455-6184519, 6184812-6184888, 6186260-6186425, 6186758-6186910, 6187280-6187388, 6187740-6187819, 6188440-6188580, 6188782-6188898, 6188995-6189088, 6189171-6189251, 6190904-6191085)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040596-T1]
WARNING: valid [SEQ_FEAT.ShortExon] Internal coding region exon is too short FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c7251427-7251282, c7251219-7251213, c7249654-7249610)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040739-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7906818 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c7907544-7907538, c7907323-7907195, c7906974-7906818, c7906722-7906621, c7906363-7906246, c7905873-7905691)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040821-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7926495 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:7922838-7922909, 7923559-7923635, 7924233-7924371, 7924785-7924988, 7925072-7925194, 7925321-7925389, 7925499-7925676, 7925783-7925861, 7925962-7926259, 7926362-7926495, 7926678-7926733, 7926908-7926978, 7927139-7927240, 7927534-7927630, 7927788-7927902, 7928000-7928096)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040825-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8700444 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c8701378-8701343, c8700824-8700750, c8700614-8700444, c8697799-8697646, c8697411-8697186, c8696996-8696672)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040916-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9565135 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:c9571672-9571670, c9570868-9570819, c9566961-9566895, c9566333-9566271, c9565680-9565611, c9565513-9565407, c9565302-9565135, c9564670-9564598, c9561881-9561807, c9560980-9560596, c9560079-9559902)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_040996-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:10055698-10055760, 10055881-10055983, 10058211->10058372)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_041031-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10058372 of lcl|scaffold_25 FEATURE: CDS: hypothetical protein [(lcl|scaffold_25:10055698-10055760, 10055881-10055983, 10058211->10058372)] [lcl|scaffold_25: delta, dna len= 10331693] -> [gnl|ncbi|FUN_041031-T1]
ERROR: valid [SEQ_FEAT.CDSmRNAXrefLocationProblem] CDS not contained within cross-referenced mRNA DESCRIPTOR: Pub: Palmer,J.M. (5-7-2024)  BIOSEQ: lcl|scaffold_25
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 6029744 FEATURE: Gene: FUN_040580 [lcl|scaffold_25:c6029759-5995714] [lcl|scaffold_25: delta, dna len= 10331693]
ERROR: valid [SEQ_FEAT.FeatureBeginsOrEndsInGap] Feature begins or ends in gap starting at 6029744 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c6029759-6029572, c6029428-6029165, c6028700-6028434, c6028060-6027794, c6027635-6027366, c6027190-6026924, c6026389-6026114, c6026005-6025739, c6025412-6025146, c6024941-6024675, c6024567-6024301, c6024167-6023901, c6023643-6023377, c6023208-6022942, c6022732-6022463, c6022255-6021977, c6021668-6021411, c6021107-6020841, c6020374-6020108, c6019600-6019334, c6016449-6016183, c6015685-6015416, c6014948-6014682, c6014224-6013958, c6013776-6011809, c6011629-6011551, c6011447-6011365, c6011001-6010889, c6010775-6010575, c6010464-6010382, c6010199-6010026, c6009875-6009716, c6009602-6009519, c6008866-6008702, c6008339-6008181, c6008010-6007833, c6007490-6007377, c6007163-6006935, c6006396-6006267, c6006086-6005993, c6004492-6004384, c6004277-6004153, c6003835-6003723, c60036...] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 220309 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:219045-219523, 220226-220309, 221918-222007, 223025-223294, 223725-223852, 224709-224766, 229046-229083, 229142-229193, 229218-229329)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 221918 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:219045-219523, 220226-220309, 221918-222007, 223025-223294, 223725-223852, 224709-224766, 229046-229083, 229142-229193, 229218-229329)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 779178 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c783185-782789, c782437-782115, c781136-780903, c780796-780699, c780317-780241, c779276-779178, c778800-778712, c778569-778351)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1859072 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c1864730-1864385, c1862822-1862660, c1861254-1861111, c1860981-1860856, c1860699-1860481, c1860017-1859912, c1859626-1859511, c1859207-1859072, c1858859-1858676, c1858150-1858016, c1856336-1856247)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 2675452 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:2674060-2674233, 2674473-2674632, 2674777-2674898, 2675367-2675452, 2675851-2675961, 2676117-2676223, 2676643-2676669, 2676865-2676956, 2677111-2677159, 2677280-2677770)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3086849 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c3117218-3115623, c3114276-3114139, c3113502-3113383, c3113074-3112982, c3112623-3112414, c3112275-3112117, c3111908-3111810, c3111553-3111416, c3111217-3111038, c3110621-3110427, c3109975-3109712, c3109107-3108990, c3106838-3106732, c3106570-3106392, c3106278-3105972, c3105859-3105679, c3104976-3104860, c3104746-3104305, c3102923-3102688, c3099198-3098829, c3097157-3096910, c3095836-3095696, c3095413-3095210, c3092288-3092001, c3091492-3091361, c3089450-3089331, c3089037-3088848, c3088315-3088068, c3087958-3087863, c3087042-3086849, c3086685-3086542, c3086231-3086093, c3085171-3085125, c3084750-3084657, c3084204-3083878)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3261198 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c3267147-3267087, c3266999-3266937, c3266658-3266545, c3265033-3264969, c3264704-3264548, c3264343-3264223, c3264053-3263974, c3263606-3263363, c3263230-3263018, c3262459-3262269, c3262046-3261968, c3261598-3261435, c3261263-3261198, c3260931-3260805, c3260361-3260160)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3520568 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:3518827-3519187, 3519489-3519593, 3519741-3519932, 3520068-3520262, 3520380-3520568, 3520662-3520847, 3521056-3521265, 3521375-3521563, 3521675-3521794, 3521910-3521931, 3522059-3522511)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3686391 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:3685591-3685752, 3686353-3686391, 3686503-3686616, 3686779-3686859, 3686988-3687106, 3688250-3688323, 3688390-3688466, 3688581-3688654, 3688839-3689027, 3689190-3689356, 3689482-3689559, 3689653-3689727, 3690047-3690175, 3690449-3690630)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3690175 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:3685591-3685752, 3686353-3686391, 3686503-3686616, 3686779-3686859, 3686988-3687106, 3688250-3688323, 3688390-3688466, 3688581-3688654, 3688839-3689027, 3689190-3689356, 3689482-3689559, 3689653-3689727, 3690047-3690175, 3690449-3690630)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3690175 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:3687916-3688060, 3688250-3688323, 3688390-3688466, 3688581-3688654, 3688839-3689027, 3689190-3689356, 3689482-3689559, 3689653-3689727, 3690047-3690175, 3690449-3690665)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 3879042 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:3873365-3873536, 3873806-3874089, 3874592-3874747, 3875616-3875765, 3876308-3876487, 3877753-3878034, 3878891->3879042)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c>4604459-4604425, c4604269-4604161, c4603986-4603952, c4603702-4603593, c4603146-4603056, c4602939-4602863, c4602707-4602671, c4602505-4602408, c4602130-4602005, c4601887-4601730, c4601428-4601293, c4601138-4600989, c4600851-4600761, c4599967-4599870, c4599582-4599448, c4599323-4599201, c4599094-4598928, c4598619-4598484, c4597729-4597403)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4604459 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c>4604459-4604425, c4604269-4604161, c4603986-4603952, c4603702-4603593, c4603146-4603056, c4602939-4602863, c4602707-4602671, c4602505-4602408, c4602130-4602005, c4601887-4601730, c4601428-4601293, c4601138-4600989, c4600851-4600761, c4599967-4599870, c4599582-4599448, c4599323-4599201, c4599094-4598928, c4598619-4598484, c4597729-4597403)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4759767 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:4757116-4757225, 4757354-4757430, 4757708-4757748, 4759732-4759767, 4760085-4760141, 4761036-4761122, 4761642-4761671)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4818694 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:4818152-4818188, 4818563-4818694, 4818896-4819099, 4819199-4819319, 4819397-4819449, 4819668-4819734, 4819907-4820122, 4820218-4820350, 4820566-4821053)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 4818694 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:4818152-4818188, 4818563-4818694, 4818896-4819099, 4819199-4819319, 4819397-4819449, 4819668-4819734, 4819907-4820122, 4820218-4820350, 4820535-4821053)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5096560 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c5101851-5101766, c5100963-5100914, c5100780-5100699, c5100596-5100520, c5100373-5100301, c5100180-5100080, c5099501-5099356, c5099047-5098954, c5098802-5098678, c5098520-5098422, c5098150-5098093, c5097979-5097914, c5097601-5097521, c5097416-5097281, c5096669-5096560, c5096428-5096330, c5095402-5095317, c5094939-5094791, c5094471-5093921)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 5998418 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c6029759-6029572, c6029428-6029165, c6028700-6028434, c6028060-6027794, c6027635-6027366, c6027190-6026924, c6026389-6026114, c6026005-6025739, c6025412-6025146, c6024941-6024675, c6024567-6024301, c6024167-6023901, c6023643-6023377, c6023208-6022942, c6022732-6022463, c6022255-6021977, c6021668-6021411, c6021107-6020841, c6020374-6020108, c6019600-6019334, c6016449-6016183, c6015685-6015416, c6014948-6014682, c6014224-6013958, c6013776-6011809, c6011629-6011551, c6011447-6011365, c6011001-6010889, c6010775-6010575, c6010464-6010382, c6010199-6010026, c6009875-6009716, c6009602-6009519, c6008866-6008702, c6008339-6008181, c6008010-6007833, c6007490-6007377, c6007163-6006935, c6006396-6006267, c6006086-6005993, c6004492-6004384, c6004277-6004153, c6003835-6003723, c60036...] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 5995878 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c6029759-6029572, c6029428-6029165, c6028700-6028434, c6028060-6027794, c6027635-6027366, c6027190-6026924, c6026389-6026114, c6026005-6025739, c6025412-6025146, c6024941-6024675, c6024567-6024301, c6024167-6023901, c6023643-6023377, c6023208-6022942, c6022732-6022463, c6022255-6021977, c6021668-6021411, c6021107-6020841, c6020374-6020108, c6019600-6019334, c6016449-6016183, c6015685-6015416, c6014948-6014682, c6014224-6013958, c6013776-6011809, c6011629-6011551, c6011447-6011365, c6011001-6010889, c6010775-6010575, c6010464-6010382, c6010199-6010026, c6009875-6009716, c6009602-6009519, c6008866-6008702, c6008339-6008181, c6008010-6007833, c6007490-6007377, c6007163-6006935, c6006396-6006267, c6006086-6005993, c6004492-6004384, c6004277-6004153, c6003835-6003723, c60036...] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6176010 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:6168497-6168683, 6169808-6170132, 6171429-6171525, 6171699-6171806, 6173165-6173218, 6175922-6176010, 6177600-6177833, 6179194-6179247, 6179354-6179458, 6179571-6179657, 6179842-6179955, 6180168-6180248, 6180352-6180426, 6180938-6181009, 6181153-6181252, 6181588-6181718, 6182010-6182082, 6182171-6182243, 6182671-6182786, 6184455-6184519, 6184812-6184888, 6186260-6186425, 6186758-6186910, 6187280-6187388, 6187740-6187819, 6188440-6188580, 6188782-6188898, 6188995-6189088, 6189171-6189251, 6190904-6191085)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6184888 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:6168497-6168683, 6169808-6170132, 6171429-6171525, 6171699-6171806, 6173165-6173218, 6175922-6176010, 6177600-6177833, 6179194-6179247, 6179354-6179458, 6179571-6179657, 6179842-6179955, 6180168-6180248, 6180352-6180426, 6180938-6181009, 6181153-6181252, 6181588-6181718, 6182010-6182082, 6182171-6182243, 6182671-6182786, 6184455-6184519, 6184812-6184888, 6186260-6186425, 6186758-6186910, 6187280-6187388, 6187740-6187819, 6188440-6188580, 6188782-6188898, 6188995-6189088, 6189171-6189251, 6190904-6191085)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 6525969 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c6528137-6527893, c6527717-6527606, c6527430-6527316, c6526929-6526851, c6526758-6526709, c6526617-6526548, c6526434-6526300, c6526091-6525969, c6525866-6525826)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7878591 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:7872132-7872147, 7872739-7872794, 7872996-7873047, 7873384-7873464, 7873591-7873656, 7873784-7873879, 7874106-7874215, 7874360-7874476, 7874607-7874710, 7874940-7875015, 7875219-7875300, 7875453-7875631, 7875742-7875862, 7875960-7876102, 7876410-7876638, 7877247-7877389, 7877684-7878591, 7878746-7879063)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7906818 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c7907575-7907538, c7907323-7907195, c7906974-7906818, c7906722-7906621, c7906363-7906246, c7905873-7905186)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 7926495 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:7922683-7922909, 7923559-7923635, 7924233-7924371, 7924785-7924988, 7925072-7925194, 7925321-7925389, 7925499-7925676, 7925783-7925861, 7925962-7926259, 7926362-7926495, 7926678-7926733, 7926908-7926978, 7927139-7927240, 7927534-7927630, 7927788-7927902, 7928000-7928247)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 8700444 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c8702377-8702302, c8701407-8701343, c8700824-8700750, c8700614-8700444, c8697799-8697646, c8697411-8697186, c8696996-8695489)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 9292425 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:9287385-9287563, 9287915-9287992, 9288076-9288179, 9288323-9288419, 9288507-9288573, 9288863-9289029, 9289353-9289449, 9289711-9289935, 9290225-9290370, 9290524-9290638, 9290949-9291110, 9291227-9291315, 9291409-9291593, 9291673-9292425, 9292454-9292928)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 9292454 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:9287385-9287563, 9287915-9287992, 9288076-9288179, 9288323-9288419, 9288507-9288573, 9288863-9289029, 9289353-9289449, 9289711-9289935, 9290225-9290370, 9290524-9290638, 9290949-9291110, 9291227-9291315, 9291409-9291593, 9291673-9292425, 9292454-9292928)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9513505 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:9512329-9512358, 9513221-9513344, 9513465-9513505, 9516158-9516290, 9516388-9516463, 9518611-9518792, 9519745-9519872, 9520713-9520733)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 9565135 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:c9571672-9571670, c9570868-9570819, c9566961-9566895, c9566333-9566271, c9565680-9565611, c9565513-9565407, c9565302-9565135, c9564670-9564598, c9561881-9561807, c9560980-9560596, c9560079-9559193)] [lcl|scaffold_25: delta, dna len= 10331693]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 10058372 of lcl|scaffold_25 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_25:10055654-10055760, 10055881-10055983, 10058211->10058372)] [lcl|scaffold_25: delta, dna len= 10331693]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3649 of lcl|scaffold_225 FEATURE: CDS: hypothetical protein [(lcl|scaffold_225:c3742-3649, c3195-2852)] [lcl|scaffold_225: delta, dna len= 9362] -> [gnl|ncbi|FUN_044813-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 3649 of lcl|scaffold_225 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_225:c3775-3649, c3195-2715)] [lcl|scaffold_225: delta, dna len= 9362]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_310:<151->397] [lcl|scaffold_310: delta, dna len= 8299] -> [gnl|ncbi|FUN_044906-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_385:c>7294-7198, c2770-2692, c2303-2221, c1847-1762, c1507-1317, c1049-820, c530-361, c151-<21)] [lcl|scaffold_385: delta, dna len= 7491] -> [gnl|ncbi|FUN_044981-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_385:c>7294-7198, c2770-2692, c2303-2221, c1847-1762, c1507-1317, c1049-820, c530-361, c151-<21)] [lcl|scaffold_385: delta, dna len= 7491] -> [gnl|ncbi|FUN_044981-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 7294 of lcl|scaffold_385 FEATURE: CDS: hypothetical protein [(lcl|scaffold_385:c>7294-7198, c2770-2692, c2303-2221, c1847-1762, c1507-1317, c1049-820, c530-361, c151-<21)] [lcl|scaffold_385: delta, dna len= 7491] -> [gnl|ncbi|FUN_044981-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 21 of lcl|scaffold_385 FEATURE: CDS: hypothetical protein [(lcl|scaffold_385:c>7294-7198, c2770-2692, c2303-2221, c1847-1762, c1507-1317, c1049-820, c530-361, c151-<21)] [lcl|scaffold_385: delta, dna len= 7491] -> [gnl|ncbi|FUN_044981-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_385:c>7296-7198, c2770-2692, c2303-2221, c1847-1762, c1507-1317, c1049-820, c530-361, c151-<21)] [lcl|scaffold_385: delta, dna len= 7491]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 21 of lcl|scaffold_385 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_385:c>7296-7198, c2770-2692, c2303-2221, c1847-1762, c1507-1317, c1049-820, c530-361, c151-<21)] [lcl|scaffold_385: delta, dna len= 7491]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_505:c>5202-5077, c3805-3658, c3576-3420, c2881-2758, c2506-2458, c2108-2029, c1911-1805, c1468-<1324)] [lcl|scaffold_505: delta, dna len= 6396] -> [gnl|ncbi|FUN_045087-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1324 of lcl|scaffold_505 FEATURE: CDS: hypothetical protein [(lcl|scaffold_505:c>5202-5077, c3805-3658, c3576-3420, c2881-2758, c2506-2458, c2108-2029, c1911-1805, c1468-<1324)] [lcl|scaffold_505: delta, dna len= 6396] -> [gnl|ncbi|FUN_045087-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 1324 of lcl|scaffold_505 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_505:c>5202-5077, c3805-3658, c3576-3420, c2881-2758, c2506-2458, c2108-2029, c1911-1805, c1468-<1324)] [lcl|scaffold_505: delta, dna len= 6396]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_565:657-742, 1445-1577, 1812-1948, 2289->2535)] [lcl|scaffold_565: raw, dna len= 5814] -> [gnl|ncbi|FUN_045130-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2535 of lcl|scaffold_565 FEATURE: CDS: hypothetical protein [(lcl|scaffold_565:657-742, 1445-1577, 1812-1948, 2289->2535)] [lcl|scaffold_565: raw, dna len= 5814] -> [gnl|ncbi|FUN_045130-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2535 of lcl|scaffold_565 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_565:653-742, 1445-1577, 1812-1948, 2289->2535)] [lcl|scaffold_565: raw, dna len= 5814]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_570:c>4610-4490, c2997-2746, c1704-1499, c1094-937, c656-<571)] [lcl|scaffold_570: raw, dna len= 5751] -> [gnl|ncbi|FUN_045133-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 4610 of lcl|scaffold_570 FEATURE: CDS: hypothetical protein [(lcl|scaffold_570:c>4610-4490, c2997-2746, c1704-1499, c1094-937, c656-<571)] [lcl|scaffold_570: raw, dna len= 5751] -> [gnl|ncbi|FUN_045133-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_570:c>4611-4490, c2997-2746, c1704-1499, c1094-937, c656-<571)] [lcl|scaffold_570: raw, dna len= 5751]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_865:c>3539-<3376] [lcl|scaffold_865: raw, dna len= 4168] -> [gnl|ncbi|FUN_045352-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_900:c>2321-2107, c293-<108)] [lcl|scaffold_900: raw, dna len= 4006] -> [gnl|ncbi|FUN_045375-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2321 of lcl|scaffold_900 FEATURE: CDS: hypothetical protein [(lcl|scaffold_900:c>2321-2107, c293-<108)] [lcl|scaffold_900: raw, dna len= 4006] -> [gnl|ncbi|FUN_045375-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_900:c>2322-2107, c293-<108)] [lcl|scaffold_900: raw, dna len= 4006]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2322 of lcl|scaffold_900 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_900:c>2322-2107, c293-<108)] [lcl|scaffold_900: raw, dna len= 4006]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1160:c>1709-1604, c521-<16)] [lcl|scaffold_1160: raw, dna len= 3101] -> [gnl|ncbi|FUN_045504-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1709 of lcl|scaffold_1160 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1160:c>1709-1604, c521-<16)] [lcl|scaffold_1160: raw, dna len= 3101] -> [gnl|ncbi|FUN_045504-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1160:c>1710-1604, c521-<16)] [lcl|scaffold_1160: raw, dna len= 3101]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1225:c>2242-2102, c1586-1511, c598-384, c194-<85)] [lcl|scaffold_1225: raw, dna len= 2930] -> [gnl|ncbi|FUN_045531-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2242 of lcl|scaffold_1225 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1225:c>2242-2102, c1586-1511, c598-384, c194-<85)] [lcl|scaffold_1225: raw, dna len= 2930] -> [gnl|ncbi|FUN_045531-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1225:c>2243-2102, c1586-1511, c598-384, c194-<85)] [lcl|scaffold_1225: raw, dna len= 2930]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2243 of lcl|scaffold_1225 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1225:c>2243-2102, c1586-1511, c598-384, c194-<85)] [lcl|scaffold_1225: raw, dna len= 2930]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1340:<36-244, 1750-1937, 2465->2587)] [lcl|scaffold_1340: delta, dna len= 2617] -> [gnl|ncbi|FUN_045580-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2587 of lcl|scaffold_1340 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1340:<36-244, 1750-1937, 2465->2587)] [lcl|scaffold_1340: delta, dna len= 2617] -> [gnl|ncbi|FUN_045580-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1340:<35-244, 1750-1937, 2465->2587)] [lcl|scaffold_1340: delta, dna len= 2617]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 35 of lcl|scaffold_1340 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1340:<35-244, 1750-1937, 2465->2587)] [lcl|scaffold_1340: delta, dna len= 2617]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 2587 of lcl|scaffold_1340 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1340:<35-244, 1750-1937, 2465->2587)] [lcl|scaffold_1340: delta, dna len= 2617]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1395:c>1026-<701] [lcl|scaffold_1395: raw, dna len= 2504] -> [gnl|ncbi|FUN_045603-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1410:<489->661] [lcl|scaffold_1410: raw, dna len= 2479] -> [gnl|ncbi|FUN_045609-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1490:c>2342-2309, c1904-1835, c1722-1575, c1375-1190, c977-839, c708-623, c498-353, c127-<55)] [lcl|scaffold_1490: raw, dna len= 2344] -> [gnl|ncbi|FUN_045636-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 2342 of lcl|scaffold_1490 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1490:c>2342-2309, c1904-1835, c1722-1575, c1375-1190, c977-839, c708-623, c498-353, c127-<55)] [lcl|scaffold_1490: raw, dna len= 2344] -> [gnl|ncbi|FUN_045636-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1545:c>2032-1829, c1660-1556, c1358-1251, c1171-860, c722-519, c356-252, c54-<2)] [lcl|scaffold_1545: raw, dna len= 2242] -> [gnl|ncbi|FUN_045660-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1555:c>1899-1786, c478-333, c100-<18)] [lcl|scaffold_1555: delta, dna len= 2225] -> [gnl|ncbi|FUN_045663-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18 of lcl|scaffold_1555 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1555:c>1899-1786, c478-333, c100-<18)] [lcl|scaffold_1555: delta, dna len= 2225] -> [gnl|ncbi|FUN_045663-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1555:c>1899-1786, c1456-1311, c1078-<996)] [lcl|scaffold_1555: delta, dna len= 2225] -> [gnl|ncbi|FUN_045663-T2]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 996 of lcl|scaffold_1555 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1555:c>1899-1786, c1456-1311, c1078-<996)] [lcl|scaffold_1555: delta, dna len= 2225] -> [gnl|ncbi|FUN_045663-T2]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1555:c>1901-1786, c478-333, c100-<18)] [lcl|scaffold_1555: delta, dna len= 2225]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1901 of lcl|scaffold_1555 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1555:c>1901-1786, c478-333, c100-<18)] [lcl|scaffold_1555: delta, dna len= 2225]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 18 of lcl|scaffold_1555 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1555:c>1901-1786, c478-333, c100-<18)] [lcl|scaffold_1555: delta, dna len= 2225]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1555:c>1901-1786, c1456-1311, c1078-<996)] [lcl|scaffold_1555: delta, dna len= 2225]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1901 of lcl|scaffold_1555 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1555:c>1901-1786, c1456-1311, c1078-<996)] [lcl|scaffold_1555: delta, dna len= 2225]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 996 of lcl|scaffold_1555 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1555:c>1901-1786, c1456-1311, c1078-<996)] [lcl|scaffold_1555: delta, dna len= 2225]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1580:c>1912-1681, c1538-1431, c1293-1167, c816-739, c623-1)] [lcl|scaffold_1580: raw, dna len= 2191]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1750:c>977-<809] [lcl|scaffold_1750: raw, dna len= 1985] -> [gnl|ncbi|FUN_045751-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1805:c>1494-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918] -> [gnl|ncbi|FUN_045770-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1805:c>1494-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918] -> [gnl|ncbi|FUN_045770-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1494 of lcl|scaffold_1805 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1805:c>1494-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918] -> [gnl|ncbi|FUN_045770-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 342 of lcl|scaffold_1805 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1805:c>1494-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918] -> [gnl|ncbi|FUN_045770-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1805:c>1496-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1496 of lcl|scaffold_1805 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1805:c>1496-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 342 of lcl|scaffold_1805 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1805:c>1496-1281, c456-<342)] [lcl|scaffold_1805: delta, dna len= 1918]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1825:c>1793-<18] [lcl|scaffold_1825: raw, dna len= 1902] -> [gnl|ncbi|FUN_045778-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [lcl|scaffold_1825:c>1794-<18] [lcl|scaffold_1825: raw, dna len= 1902]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_1830:c>1610-<1330] [lcl|scaffold_1830: raw, dna len= 1892] -> [gnl|ncbi|FUN_045780-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_1980:<261-377, 947-1077, 1343-1386, 1551->1600)] [lcl|scaffold_1980: raw, dna len= 1699] -> [gnl|ncbi|FUN_045829-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 261 of lcl|scaffold_1980 FEATURE: CDS: hypothetical protein [(lcl|scaffold_1980:<261-377, 947-1077, 1343-1386, 1551->1600)] [lcl|scaffold_1980: raw, dna len= 1699] -> [gnl|ncbi|FUN_045829-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_1980:<260-377, 947-1077, 1343-1386, 1551->1600)] [lcl|scaffold_1980: raw, dna len= 1699]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2055:c>1250-1067, c919-798, c528-<426)] [lcl|scaffold_2055: raw, dna len= 1623] -> [gnl|ncbi|FUN_045856-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 426 of lcl|scaffold_2055 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2055:c>1250-1067, c919-798, c528-<426)] [lcl|scaffold_2055: raw, dna len= 1623] -> [gnl|ncbi|FUN_045856-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2055:c>1251-1067, c919-798, c528-<426)] [lcl|scaffold_2055: raw, dna len= 1623]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1251 of lcl|scaffold_2055 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2055:c>1251-1067, c919-798, c528-<426)] [lcl|scaffold_2055: raw, dna len= 1623]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 426 of lcl|scaffold_2055 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2055:c>1251-1067, c919-798, c528-<426)] [lcl|scaffold_2055: raw, dna len= 1623]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1369 of lcl|scaffold_2135 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2135:855-957, 1223->1369)] [lcl|scaffold_2135: raw, dna len= 1552] -> [gnl|ncbi|FUN_045885-T1]
NOTE: valid [SEQ_FEAT.RareSpliceConsensusDonor] Rare splice donor consensus (GC) found instead of (GT) after exon ending at position 1369 of lcl|scaffold_2135 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2135:855-957, 1223->1369)] [lcl|scaffold_2135: raw, dna len= 1552]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2155:c>1499-1317, c962-819, c608-579, c456-<424)] [lcl|scaffold_2155: raw, dna len= 1532] -> [gnl|ncbi|FUN_045891-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1499 of lcl|scaffold_2155 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2155:c>1499-1317, c962-819, c608-579, c456-<424)] [lcl|scaffold_2155: raw, dna len= 1532] -> [gnl|ncbi|FUN_045891-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2155:c>1501-1317, c962-819, c608-579, c456-<424)] [lcl|scaffold_2155: raw, dna len= 1532]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1501 of lcl|scaffold_2155 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2155:c>1501-1317, c962-819, c608-579, c456-<424)] [lcl|scaffold_2155: raw, dna len= 1532]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2205:<81-176, 509-604)] [lcl|scaffold_2205: raw, dna len= 1474] -> [gnl|ncbi|FUN_045907-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 81 of lcl|scaffold_2205 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2205:<81-176, 509-604)] [lcl|scaffold_2205: raw, dna len= 1474] -> [gnl|ncbi|FUN_045907-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2205:<80-176, 509-1468)] [lcl|scaffold_2205: raw, dna len= 1474]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 80 of lcl|scaffold_2205 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2205:<80-176, 509-1468)] [lcl|scaffold_2205: raw, dna len= 1474]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [lcl|scaffold_2250:c>1037-<785] [lcl|scaffold_2250: raw, dna len= 1436] -> [gnl|ncbi|FUN_045926-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2320:<57-107, 395-616)] [lcl|scaffold_2320: raw, dna len= 1385] -> [gnl|ncbi|FUN_045946-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 57 of lcl|scaffold_2320 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2320:<57-107, 395-616)] [lcl|scaffold_2320: raw, dna len= 1385] -> [gnl|ncbi|FUN_045946-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 57 of lcl|scaffold_2320 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2320:<57-107, 395-616)] [lcl|scaffold_2320: raw, dna len= 1385]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2720:c>1038-921, c809-649, c370-<198)] [lcl|scaffold_2720: raw, dna len= 1138] -> [gnl|ncbi|FUN_046050-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 1038 of lcl|scaffold_2720 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2720:c>1038-921, c809-649, c370-<198)] [lcl|scaffold_2720: raw, dna len= 1138] -> [gnl|ncbi|FUN_046050-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2720:c>1039-921, c809-649, c370-<198)] [lcl|scaffold_2720: raw, dna len= 1138]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 5' partial is not at start AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2790:<62-107, 197-380, 790->958)] [lcl|scaffold_2790: raw, dna len= 1123] -> [gnl|ncbi|FUN_046067-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 62 of lcl|scaffold_2790 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2790:<62-107, 197-380, 790->958)] [lcl|scaffold_2790: raw, dna len= 1123] -> [gnl|ncbi|FUN_046067-T1]
NOTE: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence (but is at consensus splice site) FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2790:<60-107, 197-380, 790->958)] [lcl|scaffold_2790: raw, dna len= 1123]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2815:c>1102-836, c432-<333)] [lcl|scaffold_2815: raw, dna len= 1117] -> [gnl|ncbi|FUN_046074-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 333 of lcl|scaffold_2815 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2815:c>1102-836, c432-<333)] [lcl|scaffold_2815: raw, dna len= 1117] -> [gnl|ncbi|FUN_046074-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 333 of lcl|scaffold_2815 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2815:c>1102-836, c432-<333)] [lcl|scaffold_2815: raw, dna len= 1117]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: 3' partial is not at stop AND is not at consensus splice site FEATURE: CDS: hypothetical protein [(lcl|scaffold_2945:<108-260, 452->915)] [lcl|scaffold_2945: raw, dna len= 1095] -> [gnl|ncbi|FUN_046101-T1]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 915 of lcl|scaffold_2945 FEATURE: CDS: hypothetical protein [(lcl|scaffold_2945:<108-260, 452->915)] [lcl|scaffold_2945: raw, dna len= 1095] -> [gnl|ncbi|FUN_046101-T1]
WARNING: valid [SEQ_FEAT.PartialProblem] PartialLocation: Start does not include first/last residue of sequence FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2945:<106-260, 452->915)] [lcl|scaffold_2945: raw, dna len= 1095]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusAcceptor] Splice acceptor consensus (AG) not found before exon starting at position 106 of lcl|scaffold_2945 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2945:<106-260, 452->915)] [lcl|scaffold_2945: raw, dna len= 1095]
WARNING: valid [SEQ_FEAT.NotSpliceConsensusDonor] Splice donor consensus (GT) not found after exon ending at position 915 of lcl|scaffold_2945 FEATURE: mRNA: hypothetical protein [(lcl|scaffold_2945:<106-260, 452->915)] [lcl|scaffold_2945: raw, dna len= 1095]