Index of /pp/annotation~Funannotate/contents/test/fun/training/pasa/__pasa_Species_name_pasa_SQLite_chkpts
Name Last modified Size Description
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Species_name_pasa.failed_blat_alignments.gff3.ok 2024-05-06 10:17 0
Species_name_pasa.failed_blat_alignments.gtf.ok 2024-05-06 10:17 0
Species_name_pasa.failed_custom_alignments.gff3.ok 2024-05-06 10:18 0
Species_name_pasa.failed_custom_alignments.gtf.ok 2024-05-06 10:18 0
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Species_name_pasa.valid_blat_alignments.bed.ok 2024-05-06 10:17 0
Species_name_pasa.valid_blat_alignments.gff3.ok 2024-05-06 10:17 0
Species_name_pasa.valid_blat_alignments.gtf.ok 2024-05-06 10:17 0
Species_name_pasa.valid_custom_alignments.bed.ok 2024-05-06 10:18 0
Species_name_pasa.valid_custom_alignments.gff3.ok 2024-05-06 10:17 0
Species_name_pasa.valid_custom_alignments.gtf.ok 2024-05-06 10:18 0
align_transcripts.ok 2024-05-06 06:35 0
alignment_assembly_loading.ok 2024-05-06 23:12 0
alignment_assembly_subcluster_loading.ok 2024-05-06 23:39 0
alignment_assembly_subclustering.ok 2024-05-06 23:16 0
alignment_assembly_to_gene_models.ok 2024-05-06 23:47 0
alt_splice_FL_FL_compare.ok 2024-05-07 01:37 0
alt_splicing_analysis.ok 2024-05-07 01:29 0
assemble_clusters.ok 2024-05-06 23:11 0
cluster_reassign_stringent_overlap.ok 2024-05-06 22:29 0
comprehensive_alt_splice_report.ok 2024-05-07 01:43 0
create_db.ok 2024-05-06 06:31 0
cuff_gtf_to_fasta.ok 2024-05-06 06:37 0
cuff_gtf_to_gff3.ok 2024-05-06 06:36 0
find_alternate_internal_exons.ok 2024-05-07 01:33 0
import_alignments.blat.ok 2024-05-06 06:35 0
import_cuff_gtf.ok 2024-05-06 06:37 0
import_custom_alignments.ok 2024-05-06 06:36 0
merge_in_cuff_transcripts.ok 2024-05-06 06:37 0
pasa_assemblies_described.ok 2024-05-06 23:48 0
pasa_assemblies_to_bed.ok 2024-05-06 23:48 0
pasa_assemblies_to_gff3.ok 2024-05-06 23:47 0
pasa_assemblies_to_gtf.ok 2024-05-06 23:48 0
polAsites.fasta.ok 2024-05-06 10:26 0
polyAsite_analysis.ok 2024-05-06 10:24 0
populate_db_assembly_alignment_field.ok 2024-05-06 23:16 0
populate_db_assembly_sequence_field.ok 2024-05-06 23:25 0
report_alt_splicing_findings.ok 2024-05-07 01:37 0
samtools_faidx_genome.ok 2024-05-06 06:31 0
samtools_faidx_transcriptome.ok 2024-05-06 06:31 0
set_spliced_orient_transcribed_orient.ok 2024-05-06 22:29 0
splicing_variation_to_splicing_event.ok 2024-05-07 01:37 0
transdecoder.extract_FL.ok 2024-05-06 06:52 0
transdecoder.update_FL_status.ok 2024-05-06 10:16 0
transdecoder_longorfs.ok 2024-05-06 06:41 0
transdecoder_predict.ok 2024-05-06 06:52 0
update_align_valid_status.ok 2024-05-06 10:17 0
upload_transcript_fasta.ok 2024-05-06 06:37 0
upload_transcripts.ok 2024-05-06 06:31 0
validate_alignments.ok 2024-05-06 10:16 0