Training data created successfully! Check exons.dat and seqs for accuracy.


Acceptor sites for training: 19193
False acceptor sites for training: 82530
Donor sites for training: 19060
False donor sites for training: 82524

Default threshold value for the acceptor sites: -14.04115
Default threshold value for the donor sites: -7.521239

Start sites for training: 2747
False start sites for training: 132499

Default threshold value for the start sites: -4.631095


Stop sites for training: 2747
False stop sites for training: 159153

Default threshold value for the stop sites: -3.917817


IMMs trained successfully.


GlimmerHMM was trained successfully! All training files are in:
fun/predict_misc/glimmerhmm.

Different thresholds that can be chosen for the splice sites
can be consulted in:
- false.acc for acceptor sites
- false.don for donor sites.

Different threshold that can be chosen for the start sites
can be consulted in false.atg