# This output was generated with AUGUSTUS (version 3.3.2). # AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de), # O. Keller, S. König, L. Gerischer, L. Romoth and Katharina Hoff. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Initialising the parameters using config directory /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/ab_initio_parameters/augustus/ ... # species_name version. Using default transition matrix. # admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0) # Looks like /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/augustus.training.pasa.gb.test is in genbank format. Augustus uses the annotation for evaluation of accuracy. # Read in 275 genbank sequences. # # ----- sequence number 1 (length = 2295, name = scaffold_1_952229-954523) ----- # # annotation: # Sequence scaffold_1_952229-954523 length=2295 scaffold_1_952229-954523 database start_codon 601 603 . + 0 transcript_id "g_6-T1.1"; gene_id "g_6-T1"; scaffold_1_952229-954523 database intron 749 1315 . + . transcript_id "g_6-T1.1"; gene_id "g_6-T1"; scaffold_1_952229-954523 database CDS 601 748 . + 0 transcript_id "g_6-T1.1"; gene_id "g_6-T1"; scaffold_1_952229-954523 database CDS 1316 1695 . + 2 transcript_id "g_6-T1.1"; gene_id "g_6-T1"; scaffold_1_952229-954523 database stop_codon 1693 1695 . + 0 transcript_id "g_6-T1.1"; gene_id "g_6-T1"; # Predicted genes for sequence number 1 on both strands # start gene g1 scaffold_1_952229-954523 AUGUSTUS gene 631 1695 0.89 + . g1 scaffold_1_952229-954523 AUGUSTUS transcript 631 1695 0.89 + . g1.t1 scaffold_1_952229-954523 AUGUSTUS start_codon 631 633 . + 0 transcript_id "g1.t1"; gene_id "g1"; scaffold_1_952229-954523 AUGUSTUS intron 749 1315 0.99 + . transcript_id "g1.t1"; gene_id "g1"; scaffold_1_952229-954523 AUGUSTUS CDS 631 748 0.89 + 0 transcript_id "g1.t1"; gene_id "g1"; scaffold_1_952229-954523 AUGUSTUS CDS 1316 1695 1 + 2 transcript_id "g1.t1"; gene_id "g1"; scaffold_1_952229-954523 AUGUSTUS stop_codon 1693 1695 . + 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [MGPEVTAAATFVSRLLRTRGFLSEHQLQVFRDCLQQSLSEHYQQHWFPDKPQKGSGYRCIRINHEMDPIIGRAAGRIG # LTSDELFSLLPRELTMWVDPYEVSYRIGEDGSTCVLYEAEAPSTPSPAASAVNKTASPYESQLTCKKSFLMGGRTSPPKNYLMTVSS] # end gene g1 ### # # ----- sequence number 2 (length = 1940, name = scaffold_1_3605535-3607474) ----- # # annotation: # Sequence scaffold_1_3605535-3607474 length=1940 scaffold_1_3605535-3607474 database start_codon 601 603 . + 0 transcript_id "g_21-T1.1"; gene_id "g_21-T1"; scaffold_1_3605535-3607474 database intron 728 1020 . + . transcript_id "g_21-T1.1"; gene_id "g_21-T1"; scaffold_1_3605535-3607474 database CDS 601 727 . + 0 transcript_id "g_21-T1.1"; gene_id "g_21-T1"; scaffold_1_3605535-3607474 database CDS 1021 1340 . + 2 transcript_id "g_21-T1.1"; gene_id "g_21-T1"; scaffold_1_3605535-3607474 database stop_codon 1338 1340 . + 0 transcript_id "g_21-T1.1"; gene_id "g_21-T1"; # Predicted genes for sequence number 2 on both strands # start gene g2 scaffold_1_3605535-3607474 AUGUSTUS gene 601 1340 0.59 + . g2 scaffold_1_3605535-3607474 AUGUSTUS transcript 601 1340 0.59 + . g2.t1 scaffold_1_3605535-3607474 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g2.t1"; gene_id "g2"; scaffold_1_3605535-3607474 AUGUSTUS intron 728 1020 1 + . transcript_id "g2.t1"; gene_id "g2"; scaffold_1_3605535-3607474 AUGUSTUS CDS 601 727 0.59 + 0 transcript_id "g2.t1"; gene_id "g2"; scaffold_1_3605535-3607474 AUGUSTUS CDS 1021 1340 1 + 2 transcript_id "g2.t1"; gene_id "g2"; scaffold_1_3605535-3607474 AUGUSTUS stop_codon 1338 1340 . + 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MALRACGFIVFRRLALPELPPASIEFLLLQTSYGEHHWTPPKGHVDPGEDDLTTALRETKEEAGLGEEHLRVIDGFLH # KLKYEVRGKPKEVLYWLAELRDPKMVVTLSEEHQDYRWSGLDEACALAQYKDLQETLRAAQRHLEATGWR] # end gene g2 ### # # ----- sequence number 3 (length = 2355, name = scaffold_1_3662840-3665194) ----- # # annotation: # Sequence scaffold_1_3662840-3665194 length=2355 scaffold_1_3662840-3665194 database start_codon 601 603 . + 0 transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database intron 721 1100 . + . transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database intron 1203 1380 . + . transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database intron 1487 1747 . + . transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database CDS 601 720 . + 0 transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database CDS 1101 1202 . + 0 transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database CDS 1381 1486 . + 0 transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database CDS 1748 1755 . + 2 transcript_id "g_24-T1.1"; gene_id "g_24-T1"; scaffold_1_3662840-3665194 database stop_codon 1753 1755 . + 0 transcript_id "g_24-T1.1"; gene_id "g_24-T1"; # Predicted genes for sequence number 3 on both strands # start gene g3 scaffold_1_3662840-3665194 AUGUSTUS gene 131 2355 0.32 + . g3 scaffold_1_3662840-3665194 AUGUSTUS transcript 131 2355 0.32 + . g3.t1 scaffold_1_3662840-3665194 AUGUSTUS start_codon 131 133 . + 0 transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS intron 193 587 0.91 + . transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS intron 721 1100 1 + . transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS intron 1203 1380 0.79 + . transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS intron 1487 2355 0.5 + . transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS CDS 131 192 0.72 + 0 transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS CDS 588 720 0.91 + 1 transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS CDS 1101 1202 1 + 0 transcript_id "g3.t1"; gene_id "g3"; scaffold_1_3662840-3665194 AUGUSTUS CDS 1381 1486 0.72 + 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MEAVEEQMSVVGKLTEAPYKQTQQKMGMSRVVIGCLVLAFFVVMMAQQAEGHITFFSPQEMRTLKEREGKKLMEPRSE # DGQIDKPANQHLPKDDGVGNPEKTVEISMQLSAKQLDHVAPVLEEVLQELMEDGNK] # end gene g3 ### # # ----- sequence number 4 (length = 2367, name = scaffold_1_4586258-4588624) ----- # # annotation: # Sequence scaffold_1_4586258-4588624 length=2367 scaffold_1_4586258-4588624 database start_codon 601 603 . + 0 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database intron 702 820 . + . transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database intron 849 948 . + . transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database intron 1036 1220 . + . transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database intron 1426 1557 . + . transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database intron 1618 1729 . + . transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database CDS 601 701 . + 0 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database CDS 821 848 . + 1 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database CDS 949 1035 . + 0 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database CDS 1221 1425 . + 0 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database CDS 1558 1617 . + 2 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database CDS 1730 1767 . + 2 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; scaffold_1_4586258-4588624 database stop_codon 1765 1767 . + 0 transcript_id "g_27-T1.1"; gene_id "g_27-T1"; # Predicted genes for sequence number 4 on both strands # start gene g4 scaffold_1_4586258-4588624 AUGUSTUS gene 601 2305 0.31 + . g4 scaffold_1_4586258-4588624 AUGUSTUS transcript 601 2305 0.31 + . g4.t1 scaffold_1_4586258-4588624 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS intron 702 820 0.75 + . transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS intron 849 1220 0.67 + . transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS intron 1426 1557 0.94 + . transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS intron 1618 2243 0.51 + . transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS CDS 601 701 0.68 + 0 transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS CDS 821 848 0.75 + 1 transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS CDS 1221 1425 1 + 0 transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS CDS 1558 1617 0.93 + 2 transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS CDS 2244 2305 0.56 + 2 transcript_id "g4.t1"; gene_id "g4"; scaffold_1_4586258-4588624 AUGUSTUS stop_codon 2303 2305 . + 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MASQNMDPAAASSTSSRKANETGGSAAKGSVSKRLQQELMTLMVYEGLRYKLSLEFPSGYPYKAPRVKFITPCFHPNV # DEQGFICLDILKDKWSALYDVRSILLSIQSLLGEPNNESPLNAGAAELWDNQEGCHHCHGCHPDIQLPPRPSE] # end gene g4 ### # # ----- sequence number 5 (length = 4864, name = scaffold_1_5759279-5764142) ----- # # annotation: # Sequence scaffold_1_5759279-5764142 length=4864 scaffold_1_5759279-5764142 database start_codon 601 603 . + 0 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database intron 766 3183 . + . transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database intron 3289 3421 . + . transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database intron 3714 3855 . + . transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database intron 3972 4117 . + . transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database CDS 601 765 . + 0 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database CDS 3184 3288 . + 0 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database CDS 3422 3713 . + 0 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database CDS 3856 3971 . + 2 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database CDS 4118 4264 . + 0 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; scaffold_1_5759279-5764142 database stop_codon 4262 4264 . + 0 transcript_id "g_165-T1.1"; gene_id "g_165-T1"; # Predicted genes for sequence number 5 on both strands # start gene g5 scaffold_1_5759279-5764142 AUGUSTUS gene 649 4264 0.85 + . g5 scaffold_1_5759279-5764142 AUGUSTUS transcript 649 4264 0.85 + . g5.t1 scaffold_1_5759279-5764142 AUGUSTUS start_codon 649 651 . + 0 transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS intron 766 3183 0.92 + . transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS intron 3289 3421 0.99 + . transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS intron 3714 3855 1 + . transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS intron 3972 4117 0.96 + . transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS CDS 649 765 0.97 + 0 transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS CDS 3184 3288 1 + 0 transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS CDS 3422 3713 0.99 + 0 transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS CDS 3856 3971 0.96 + 2 transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS CDS 4118 4264 1 + 0 transcript_id "g5.t1"; gene_id "g5"; scaffold_1_5759279-5764142 AUGUSTUS stop_codon 4262 4264 . + 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MTWGSSTSSGYYSEDDFDSEFEQYFTARTSFARKPKKEKDEKIEWGKQELSVAEIQQKVKEYNAQINSNLFMNMNKDG # SYTGFIKVQFKLVRPVSVPPPKKGAATQETGGKRAGGVKRRTSFYLPKDTSKHLHISSRTRAREVIEALLKKFTVVDNPGKFALFERSERNDQVYLRK # LPDDERPLILRLCAGPNEKVLSFVLKENETGEVNWDAFSMPELKNFLRILQREEEEHVKQIVQRYALARTRMQEALAGSTPG] # end gene g5 ### # # ----- sequence number 6 (length = 4014, name = scaffold_1_5949133-5953146) ----- # # annotation: # Sequence scaffold_1_5949133-5953146 length=4014 scaffold_1_5949133-5953146 database start_codon 601 603 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 658 851 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 891 987 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 1095 1737 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 1802 1956 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 2120 2256 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 2324 2563 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 2766 2915 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database intron 3133 3307 . + . transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 601 657 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 852 890 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 988 1094 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 1738 1801 . + 1 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 1957 2119 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 2257 2323 . + 2 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 2564 2765 . + 1 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 2916 3132 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database CDS 3308 3414 . + 2 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; scaffold_1_5949133-5953146 database stop_codon 3412 3414 . + 0 transcript_id "g_43-T1.1"; gene_id "g_43-T1"; # Predicted genes for sequence number 6 on both strands # start gene g6 scaffold_1_5949133-5953146 AUGUSTUS gene 601 3414 0.84 + . g6 scaffold_1_5949133-5953146 AUGUSTUS transcript 601 3414 0.84 + . g6.t1 scaffold_1_5949133-5953146 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 658 851 1 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 891 987 1 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 1095 1737 1 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 1802 1956 1 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 2120 2256 1 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 2324 2563 0.99 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 2766 2915 0.92 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS intron 3133 3307 0.95 + . transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 601 657 0.98 + 0 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 852 890 1 + 0 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 988 1094 1 + 0 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 1738 1801 1 + 1 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 1957 2119 1 + 0 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 2257 2323 1 + 2 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 2564 2765 0.9 + 1 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 2916 3132 1 + 0 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS CDS 3308 3414 0.95 + 2 transcript_id "g6.t1"; gene_id "g6"; scaffold_1_5949133-5953146 AUGUSTUS stop_codon 3412 3414 . + 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MSELDQLRQEAEQLKSQIRDARKACADATLSQITANIDAVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK # LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ # TTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMIYSHDNIICGIT # SVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN] # end gene g6 ### # # ----- sequence number 7 (length = 2698, name = scaffold_1_6341551-6344248) ----- # # annotation: # Sequence scaffold_1_6341551-6344248 length=2698 scaffold_1_6341551-6344248 database start_codon 601 603 . + 0 transcript_id "g_50-T1.1"; gene_id "g_50-T1"; scaffold_1_6341551-6344248 database intron 1151 1511 . + . transcript_id "g_50-T1.1"; gene_id "g_50-T1"; scaffold_1_6341551-6344248 database CDS 601 1150 . + 0 transcript_id "g_50-T1.1"; gene_id "g_50-T1"; scaffold_1_6341551-6344248 database CDS 1512 2098 . + 2 transcript_id "g_50-T1.1"; gene_id "g_50-T1"; scaffold_1_6341551-6344248 database stop_codon 2096 2098 . + 0 transcript_id "g_50-T1.1"; gene_id "g_50-T1"; # Predicted genes for sequence number 7 on both strands # start gene g7 scaffold_1_6341551-6344248 AUGUSTUS gene 601 2098 0.95 + . g7 scaffold_1_6341551-6344248 AUGUSTUS transcript 601 2098 0.95 + . g7.t1 scaffold_1_6341551-6344248 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g7.t1"; gene_id "g7"; scaffold_1_6341551-6344248 AUGUSTUS intron 1151 1511 1 + . transcript_id "g7.t1"; gene_id "g7"; scaffold_1_6341551-6344248 AUGUSTUS CDS 601 1150 0.95 + 0 transcript_id "g7.t1"; gene_id "g7"; scaffold_1_6341551-6344248 AUGUSTUS CDS 1512 2098 1 + 2 transcript_id "g7.t1"; gene_id "g7"; scaffold_1_6341551-6344248 AUGUSTUS stop_codon 2096 2098 . + 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MLQSFSQSQDWFYSEPLLFDDEFCQSLMKDLQSLPTPPQSPPTKAGLSSKPLSKEDQLSYVSDILLEDQDPQLNWNCD # FFNNVNGTESKDQRPEESEDCLWHCLGDSKSIEEKLSSVLSSSPLLSDIDTRIFEEIAGSTLDCHRAALACQALESEDLLQDSQESTSDYGSAGGEFS # TNSSSDSEEEIDVVTVRKPSGSSPQPQSADESLRLQQQRHHLEIQQQHNYAAPCPASPLRPEPASASLSGYHSKRARGSESSHRHHHHSGRSSSSSRH # HHHHHHGSGSSRQSLDVEDEEERRRTHNVMERQRRNELKNCFLRLRDNVPELSQNDKASKVVILKRARDGIRSLEVEGRRLQARKDKLRDRQEKLKAR # LEQLRR] # end gene g7 ### # # ----- sequence number 8 (length = 8810, name = scaffold_1_9204467-9213276) ----- # # annotation: # Sequence scaffold_1_9204467-9213276 length=8810 scaffold_1_9204467-9213276 database start_codon 601 603 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 634 1050 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 1076 3012 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 3110 3416 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 3526 3689 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 3743 3832 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 3926 4078 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 4161 4247 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 4340 4491 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 4608 4728 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 4851 5039 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 5163 5248 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 5437 5648 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 5794 5975 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 6120 6229 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 6416 6519 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 6589 6788 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 6904 7024 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 7153 7584 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 7680 7784 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database intron 7935 8107 . + . transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 601 633 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 1051 1075 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 3013 3109 . + 2 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 3417 3525 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 3690 3742 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 3833 3925 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 4079 4160 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 4248 4339 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 4492 4607 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 4729 4850 . + 2 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 5040 5162 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 5249 5436 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 5649 5793 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 5976 6119 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 6230 6415 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 6520 6588 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 6789 6903 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 7025 7152 . + 2 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 7585 7679 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 7785 7934 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database CDS 8108 8210 . + 1 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; scaffold_1_9204467-9213276 database stop_codon 8208 8210 . + 0 transcript_id "g_67-T1.1"; gene_id "g_67-T1"; # Predicted genes for sequence number 8 on both strands # start gene g8 scaffold_1_9204467-9213276 AUGUSTUS gene 2392 8210 0.72 + . g8 scaffold_1_9204467-9213276 AUGUSTUS transcript 2392 8210 0.72 + . g8.t1 scaffold_1_9204467-9213276 AUGUSTUS start_codon 2392 2394 . + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 2411 3012 0.76 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 3110 3416 0.98 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 3526 3689 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 3743 3832 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 3926 4078 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 4161 4247 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 4340 4491 0.99 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 4608 4728 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 4851 5039 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 5163 5248 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 5437 5648 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 5794 5975 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 6120 6229 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 6416 6519 0.99 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 6589 6788 0.99 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 6904 7024 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 7153 7584 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 7680 7784 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS intron 7935 8107 1 + . transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 2392 2410 0.76 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 3013 3109 0.98 + 2 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 3417 3525 1 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 3690 3742 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 3833 3925 1 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 4079 4160 1 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 4248 4339 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 4492 4607 0.99 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 4729 4850 1 + 2 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 5040 5162 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 5249 5436 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 5649 5793 1 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 5976 6119 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 6230 6415 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 6520 6588 0.99 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 6789 6903 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 7025 7152 1 + 2 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 7585 7679 1 + 0 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 7785 7934 1 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS CDS 8108 8210 0.98 + 1 transcript_id "g8.t1"; gene_id "g8"; scaffold_1_9204467-9213276 AUGUSTUS stop_codon 8208 8210 . + 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MFAQTKHSHKHKDKYKDKDHKHKDHKKDKEREKSKYGNSDHKDSDKKHKEERVKHKDGSTDRHKHKDKEKRKEEKVRV # LDGKPKKEKENGFASPPRIKSEPDSDGFYHSPKHEKSLKRVRDDDNSEFKPKKVKTENDRLDKKIKKKNREDEDIKPKKTKNKKGEGADGKKKAKKEP # EEKWKWWEEERSTDGSKWRFLEHKGPVFAAAYEPLPSKVKFYYDGKHMKLKPEAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTPEEKSKITDL # NKCEFGEMADYFKAQSEARKQMSKEEKLKIKEENERLLQEYGFCIMDNHKERIANFRIEPPGLFRGRGDHPKMGMLKRRIRPQDIIINCSKDSNHPKP # PPGTKWKELRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRLRAQYREDWKSKEMRIRQRAVALYFIDKLALRAGNEK # EEGETADTVGCCSLRVEHIVLSPEKDGQEFVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMEGKQPEDDLFDRLNTTILNKHLQELMDGLTAKVFRT # YNASITLQQQLKELTSPDENVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKKDQLSDAKRELKSAKADAKVRRDEKSKKSVETKKK # AVERIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKWDIPIEKIYNKTQREKFAWAIDMADDDFEF] # end gene g8 ### # # ----- sequence number 9 (length = 2102, name = scaffold_1_10463832-10465933) ----- # # annotation: # Sequence scaffold_1_10463832-10465933 length=2102 scaffold_1_10463832-10465933 database start_codon 601 603 . + 0 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database intron 685 859 . + . transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database intron 936 1033 . + . transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database intron 1109 1206 . + . transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database intron 1288 1419 . + . transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database CDS 601 684 . + 0 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database CDS 860 935 . + 0 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database CDS 1034 1108 . + 2 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database CDS 1207 1287 . + 2 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database CDS 1420 1502 . + 2 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; scaffold_1_10463832-10465933 database stop_codon 1500 1502 . + 0 transcript_id "g_77-T1.1"; gene_id "g_77-T1"; # Predicted genes for sequence number 9 on both strands # (none) # # ----- sequence number 10 (length = 5697, name = scaffold_1_10803358-10809054) ----- # # annotation: # Sequence scaffold_1_10803358-10809054 length=5697 scaffold_1_10803358-10809054 database start_codon 601 603 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 784 945 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 1040 1151 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 1254 1333 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 1441 1521 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 1623 1823 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 1903 2009 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 2185 2292 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 2367 2462 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 2539 2620 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 2692 2786 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 2907 2991 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 3121 3277 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 3358 3449 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 3577 3709 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 3788 4299 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 4429 4662 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database intron 4736 4996 . + . transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 601 783 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 946 1039 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 1152 1253 . + 2 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 1334 1440 . + 2 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 1522 1622 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 1824 1902 . + 1 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 2010 2184 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 2293 2366 . + 2 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 2463 2538 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 2621 2691 . + 2 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 2787 2906 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 2992 3120 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 3278 3357 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 3450 3576 . + 1 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 3710 3787 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 4300 4428 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 4663 4735 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database CDS 4997 5097 . + 2 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; scaffold_1_10803358-10809054 database stop_codon 5095 5097 . + 0 transcript_id "g_79-T1.1"; gene_id "g_79-T1"; # Predicted genes for sequence number 10 on both strands # start gene g9 scaffold_1_10803358-10809054 AUGUSTUS gene 1 5097 0.58 + . g9 scaffold_1_10803358-10809054 AUGUSTUS transcript 1 5097 0.58 + . g9.t1 scaffold_1_10803358-10809054 AUGUSTUS intron 1 945 0.67 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 1040 1151 0.99 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 1254 1333 0.99 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 1441 1521 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 1623 1823 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 1903 2009 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 2185 2292 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 2367 2462 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 2539 2620 0.96 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 2692 2786 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 2907 2991 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 3121 3277 0.99 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 3358 3449 1 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 3577 3709 0.98 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 3788 4299 0.98 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 4429 4662 0.98 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS intron 4736 4996 0.99 + . transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 946 1039 0.72 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 1152 1253 0.99 + 2 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 1334 1440 1 + 2 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 1522 1622 1 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 1824 1902 1 + 1 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 2010 2184 1 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 2293 2366 1 + 2 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 2463 2538 0.96 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 2621 2691 1 + 2 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 2787 2906 1 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 2992 3120 0.99 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 3278 3357 1 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 3450 3576 1 + 1 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 3710 3787 0.98 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 4300 4428 1 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 4663 4735 0.97 + 0 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS CDS 4997 5097 1 + 2 transcript_id "g9.t1"; gene_id "g9"; scaffold_1_10803358-10809054 AUGUSTUS stop_codon 5095 5097 . + 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [EEVFPYPEIGNEELEEMNMFVAPVEKFFNEQVDSKRIDHEAKIPPETLDGLKELGLFGIQVPEEYGGLGLSNTMYARL # GEIISLDGSIAVTLAAHQAIGLKGILIAGNEEQKAKYLPKLASGEHVAAFCLTEPGSGSDAASIQTRGTLSEDGTHYLISGSKIWISNGGMADVMTVF # ARTETVDKDGVKKDKISAFIVERAFGGITSGKPEDKLGIRGSNTCEVTFDCTPVPVENVIGEVGAGFKVAMNILNSGRFSMGSAGAGMIKKLIELTAE # YAGTRKQFNKKLSEFGMIQEKFAVMAQNAFVMESMAYLTAGMMDRPGVPDCSLEAAMVKVFSSEGGWVCVSEALQVLGGLGYTKNYPYERYLRDCRIL # LIFEGTNEILRMYIALTGMQYAGKILTGKIKELKKGNVGVVADMVGKRLREFAHMPKDLGLTGADGVVHPSLAESTKKFEESVLLFGNTVESLLYRYG # KTIVDEQLVLKRVADILINLYAMTAVLSRASRSIRIGLRNHDHEVLLTNTFCTEAFHKNNYLVFQLQKNSPENNDANIKKIAQAVLEQRAYLCSHPLD # RTF] # end gene g9 ### # # ----- sequence number 11 (length = 3493, name = scaffold_1_10971211-10974703) ----- # # annotation: # Sequence scaffold_1_10971211-10974703 length=3493 scaffold_1_10971211-10974703 database start_codon 601 603 . + 0 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database intron 866 1069 . + . transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database intron 1230 1337 . + . transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database intron 1477 1576 . + . transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database intron 1711 1820 . + . transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database intron 1982 2238 . + . transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database intron 2342 2544 . + . transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 601 865 . + 0 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 1070 1229 . + 2 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 1338 1476 . + 1 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 1577 1710 . + 0 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 1821 1981 . + 1 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 2239 2341 . + 2 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database CDS 2545 2893 . + 1 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; scaffold_1_10971211-10974703 database stop_codon 2891 2893 . + 0 transcript_id "g_81-T1.1"; gene_id "g_81-T1"; # Predicted genes for sequence number 11 on both strands # start gene g10 scaffold_1_10971211-10974703 AUGUSTUS gene 601 2893 0.82 + . g10 scaffold_1_10971211-10974703 AUGUSTUS transcript 601 2893 0.82 + . g10.t1 scaffold_1_10971211-10974703 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS intron 866 1069 1 + . transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS intron 1230 1337 1 + . transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS intron 1477 1576 1 + . transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS intron 1711 1820 0.93 + . transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS intron 1982 2238 1 + . transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS intron 2342 2544 1 + . transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 601 865 0.87 + 0 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 1070 1229 1 + 2 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 1338 1476 1 + 1 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 1577 1710 1 + 0 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 1821 1981 0.93 + 1 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 2239 2341 1 + 2 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS CDS 2545 2893 1 + 1 transcript_id "g10.t1"; gene_id "g10"; scaffold_1_10971211-10974703 AUGUSTUS stop_codon 2891 2893 . + 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MPKVKKSRGGGVEKSVGTLALADQILQGDMVRVPGRVKSRDTREDEEDEYVDERLSRKILEQARIQQEELQTEYGLEP # EVKKKPATVLGPHTNDEDSDEEWPALGEAGAGEGVDAGCATEVLVDAEDEKAIEIFMNKNPPMRRTLADIIMEKITEKQTEVGTVMSEASGRPMPQLD # PRVIEVYRGVNKVLSKYRSGKLPKAFKIIPALSNWEQVLYLTEPETWTAAAMYQATRIFSSNLKERMAQRFYNLVLLPRIRDDIAEYKRLNFHLYNAL # KKALFKPGAWFKGILIPLCESGTCTLREAIIIGSILTKCSIPVLHSSAAMLKLAEMEYNGANSIFLRLLLDKKYAVPFRVLDALVAHFLSFRSEKRAL # PVLWHQSLLTLTQRYKSDLASEQKTALLELLKIQTHPQISAEIRRELQNSESRDLETEMPVMMD] # end gene g10 ### # # ----- sequence number 12 (length = 4056, name = scaffold_1_11269483-11273538) ----- # # annotation: # Sequence scaffold_1_11269483-11273538 length=4056 scaffold_1_11269483-11273538 database start_codon 601 603 . + 0 transcript_id "g_87-T1.1"; gene_id "g_87-T1"; scaffold_1_11269483-11273538 database intron 604 2484 . + . transcript_id "g_87-T1.1"; gene_id "g_87-T1"; scaffold_1_11269483-11273538 database CDS 601 603 . + 0 transcript_id "g_87-T1.1"; gene_id "g_87-T1"; scaffold_1_11269483-11273538 database CDS 2485 3456 . + 0 transcript_id "g_87-T1.1"; gene_id "g_87-T1"; scaffold_1_11269483-11273538 database stop_codon 3454 3456 . + 0 transcript_id "g_87-T1.1"; gene_id "g_87-T1"; # Predicted genes for sequence number 12 on both strands # start gene g11 scaffold_1_11269483-11273538 AUGUSTUS gene 2032 3456 0.86 + . g11 scaffold_1_11269483-11273538 AUGUSTUS transcript 2032 3456 0.86 + . g11.t1 scaffold_1_11269483-11273538 AUGUSTUS start_codon 2032 2034 . + 0 transcript_id "g11.t1"; gene_id "g11"; scaffold_1_11269483-11273538 AUGUSTUS intron 2161 2484 0.88 + . transcript_id "g11.t1"; gene_id "g11"; scaffold_1_11269483-11273538 AUGUSTUS CDS 2032 2160 0.86 + 0 transcript_id "g11.t1"; gene_id "g11"; scaffold_1_11269483-11273538 AUGUSTUS CDS 2485 3456 0.92 + 0 transcript_id "g11.t1"; gene_id "g11"; scaffold_1_11269483-11273538 AUGUSTUS stop_codon 3454 3456 . + 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MHLLAASYCMSSATPERLEPVFITVTNYAFTVFSVLSYDMTVILCLRDSGDCLREQITYMMRSLQDLKHLRRSCPAPA # TTSAPVAAPRSAVARLRQQRALRECRTRLRMSDASTASTYDSACCLASPLEEEEEEDKETDSRLCLSMVLPSPSSEKSLEFDSGYSEASWQDEGVVLR # RTRNVRVSSSACLRTNRSSNGRVRPKSTSDACLETWTSFEASDPEDWTTSLLTRGRNRQPLVLGDNSFADLIENWMDLPECPEPSELKPSSGQKLAKG # FLVNMRKKIAGMSKSVEGRVRMRSSDSSSRVNRTAMAPNRLSCPVGVQPCTPFFHQSHSGLHELDTDFSHFTALMKSGSRQPIICNDIIGYI] # end gene g11 ### # # ----- sequence number 13 (length = 8019, name = scaffold_1_11739500-11747518) ----- # # annotation: # Sequence scaffold_1_11739500-11747518 length=8019 scaffold_1_11739500-11747518 database start_codon 601 603 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 751 1436 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 1620 1972 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 2037 2163 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 2241 2711 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 2811 3037 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 3240 3396 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 3553 4112 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 4220 4384 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 4440 4538 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 4631 4888 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 5102 5393 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 5596 5963 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 6132 6686 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database intron 6797 7278 . + . transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 601 750 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 1437 1619 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 1973 2036 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 2164 2240 . + 2 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 2712 2810 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 3038 3239 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 3397 3552 . + 2 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 4113 4219 . + 2 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 4385 4439 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 4539 4630 . + 2 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 4889 5101 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 5394 5595 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 5964 6131 . + 2 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 6687 6796 . + 2 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database CDS 7279 7419 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; scaffold_1_11739500-11747518 database stop_codon 7417 7419 . + 0 transcript_id "g_97-T1.1"; gene_id "g_97-T1"; # Predicted genes for sequence number 13 on both strands # start gene g12 scaffold_1_11739500-11747518 AUGUSTUS gene 703 7419 0.38 + . g12 scaffold_1_11739500-11747518 AUGUSTUS transcript 703 7419 0.38 + . g12.t1 scaffold_1_11739500-11747518 AUGUSTUS start_codon 703 705 . + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 751 1436 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 1620 1972 0.66 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 2037 2163 0.65 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 2241 2711 0.65 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 2811 3037 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 3240 3396 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 3553 4112 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 4220 4384 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 4440 4538 0.78 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 4631 4888 0.88 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 5102 5393 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 5596 5963 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 6132 6686 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS intron 6797 7278 1 + . transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 703 750 0.67 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 1437 1619 1 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 1973 2036 0.64 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 2164 2240 0.65 + 2 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 2712 2810 1 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 3038 3239 1 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 3397 3552 1 + 2 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 4113 4219 1 + 2 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 4385 4439 1 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 4539 4630 0.78 + 2 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 4889 5101 0.88 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 5394 5595 1 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 5964 6131 1 + 2 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 6687 6796 1 + 2 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS CDS 7279 7419 1 + 0 transcript_id "g12.t1"; gene_id "g12"; scaffold_1_11739500-11747518 AUGUSTUS stop_codon 7417 7419 . + 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MKYGIQILPDPVIMGQVKTEEVMLVSSKYKQLYECRLPVQAVRFHQDPASEPDHQSYSGPSIPDLLKPMHSVPCLVKT # KDWWTYEFCFGQHIRQYHLEDTEIRGDILFLGFYESEFDWSNETAKASKQHKLKRYHSQSYVNGSKCDLNGSHRETEVRFVCEEGSGDYISRVDEPQS # CRYVLTIHTSRTCLHPYLRPPSTAKPQGIVCQPALSAQQYMDYVRAQVSDTKRKVEQISEELKSLDEMLAGGDRTDGSVKETTGKESTMPTDDILDTH # TKGTEAENSHAAPEEPEDSEFWEGVAKPQGAKETNTQQTADDSENRGLVDNEVIEEGFVDEKFNFKIITDPADLMKFVQHLKESNRKKSQTQAKTQAK # SHRMSEEKERQEEERQEEEEEEGHLLQEFEEEIADLSMPAAKIDEIKEEMQKQFDNIIDEAQQELETEGLKGEFDRTQATQTLETTLDKLLDRLEDKE # SLETESQTEGGQRANDPARGSPSLAPHQPEQAADDHVKIKITKYKTGSSPDGEVRVQEMGEGDPQWQHIKDVVKEQLEKAGLKAEGKIEVKILTRKNA # EETGEQWLTEEDTKSFRELLINLLTGGTEEVYKEQKRQQELENNYRFVWGESQEEHQSTTTTSDSEDLEL] # end gene g12 ### # # ----- sequence number 14 (length = 7595, name = scaffold_1_11868946-11876540) ----- # # annotation: # Sequence scaffold_1_11868946-11876540 length=7595 scaffold_1_11868946-11876540 database start_codon 601 603 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 686 1784 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 1859 2070 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 2149 2535 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 2726 2867 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 3034 3138 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 3184 3319 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 3429 3853 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 3950 4036 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 4130 4311 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 4438 4544 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 4610 4694 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 4759 4832 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 4980 5100 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 5172 5279 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 5368 5500 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 5654 5734 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 5900 6017 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 6080 6204 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 6317 6424 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 6525 6605 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database intron 6712 6859 . + . transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 601 685 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 1785 1858 . + 2 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 2071 2148 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 2536 2725 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 2868 3033 . + 2 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 3139 3183 . + 1 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 3320 3428 . + 1 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 3854 3949 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 4037 4129 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 4312 4437 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 4545 4609 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 4695 4758 . + 1 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 4833 4979 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 5101 5171 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 5280 5367 . + 1 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 5501 5653 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 5735 5899 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 6018 6079 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 6205 6316 . + 1 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 6425 6524 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 6606 6711 . + 2 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database CDS 6860 6995 . + 1 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; scaffold_1_11868946-11876540 database stop_codon 6993 6995 . + 0 transcript_id "g_161-T1.1"; gene_id "g_161-T1"; # Predicted genes for sequence number 14 on both strands # start gene g13 scaffold_1_11868946-11876540 AUGUSTUS gene 235 6995 0.42 + . g13 scaffold_1_11868946-11876540 AUGUSTUS transcript 235 6995 0.42 + . g13.t1 scaffold_1_11868946-11876540 AUGUSTUS start_codon 235 237 . + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 281 535 0.65 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 686 1784 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 1859 2070 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 2149 2535 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 2726 2867 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 3034 3138 0.9 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 3184 3319 0.9 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 3429 3853 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 3950 4036 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 4130 4311 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 4438 4544 0.94 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 4610 4694 0.94 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 4759 4832 0.96 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 4980 5100 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 5172 5279 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 5368 5500 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 5654 5734 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 5900 6017 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 6080 6204 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 6317 6424 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 6525 6605 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS intron 6712 6859 1 + . transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 235 280 0.51 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 536 685 0.81 + 2 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 1785 1858 1 + 2 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 2071 2148 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 2536 2725 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 2868 3033 1 + 2 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 3139 3183 0.9 + 1 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 3320 3428 1 + 1 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 3854 3949 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 4037 4129 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 4312 4437 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 4545 4609 0.94 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 4695 4758 0.94 + 1 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 4833 4979 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 5101 5171 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 5280 5367 1 + 1 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 5501 5653 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 5735 5899 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 6018 6079 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 6205 6316 1 + 1 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 6425 6524 1 + 0 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 6606 6711 1 + 2 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS CDS 6860 6995 1 + 1 transcript_id "g13.t1"; gene_id "g13"; scaffold_1_11868946-11876540 AUGUSTUS stop_codon 6993 6995 . + 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MGVLYLGLWEEPESYDFLLPPVRLPASVPASGTSASTMSKTAHVDPTKMGVGRAIAVLTSGGDAQGMNAAVRATVRVG # LYTGAKVFFVHEGYQGLVDGGDNIRPATWESVSMMLQLGGTVIGSARCQDFRTKEGRTKAAHNLVKRGITNLCVIGGDGSLTGANQFRTEWSELLADL # LKAGQITEAEAKSSSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIIEVVDAITTTAQSHQRTFILEVMGRHCGYLALVTALACGADWVFIPEMPPED # NWEEHLCRRLTDQRERGSRLNVIIVAEGAMNRQGKPITCDQLKQLVSERLGFDTRATILGHVQRGGTPSAFDRILGSRMGVEAVMALLEATPDTPACV # VSLSGNMAVRLPLMECVQVTKDVTIAMAEGRFEDAVKLRGKSFENNWNTYKMLAHVHPPDTKSNINIAIVNVGAPCAGMNAAVRSAVRIGLIQGHHML # AVHDGFDGLAYGQIEPITWAGVGGWTGKGGSMLGTKRSLPGKLMEEISLNIAKFNIHALVIIGGFEAFLGGLELVQAREKYEELCIPLVVIPATVSNN # IPGSDFSIGADTALNTITSTCDRIKQSAAGTKRRVFIIETMGGYCGYLATMAGLASGADAAYIYEEHFGIRDLEMNVEHLVEKMKTTVKRGLILRNER # CNANYTTDFVFNLYSEEGKGVFDCRKNILGHMQQGGTPTPFDRNFGTKMGAKSVLWLTDKLKECYRHGRIFANSPDSACVLGMKKRSLVFQPLAELKD # HTDIEHRIPKTQWWLKLRPILKILAKYNISLDTSEIAHMEHVIKKRVLV] # end gene g13 ### # # ----- sequence number 15 (length = 3289, name = scaffold_1_12683523-12686811) ----- # # annotation: # Sequence scaffold_1_12683523-12686811 length=3289 scaffold_1_12683523-12686811 database start_codon 601 603 . + 0 transcript_id "g_110-T1.1"; gene_id "g_110-T1"; scaffold_1_12683523-12686811 database intron 643 973 . + . transcript_id "g_110-T1.1"; gene_id "g_110-T1"; scaffold_1_12683523-12686811 database intron 1058 1951 . + . transcript_id "g_110-T1.1"; gene_id "g_110-T1"; scaffold_1_12683523-12686811 database CDS 601 642 . + 0 transcript_id "g_110-T1.1"; gene_id "g_110-T1"; scaffold_1_12683523-12686811 database CDS 974 1057 . + 0 transcript_id "g_110-T1.1"; gene_id "g_110-T1"; scaffold_1_12683523-12686811 database CDS 1952 2689 . + 0 transcript_id "g_110-T1.1"; gene_id "g_110-T1"; scaffold_1_12683523-12686811 database stop_codon 2687 2689 . + 0 transcript_id "g_110-T1.1"; gene_id "g_110-T1"; # Predicted genes for sequence number 15 on both strands # start gene g14 scaffold_1_12683523-12686811 AUGUSTUS gene 1 2689 0.38 + . g14 scaffold_1_12683523-12686811 AUGUSTUS transcript 1 2689 0.38 + . g14.t1 scaffold_1_12683523-12686811 AUGUSTUS intron 1 480 0.56 + . transcript_id "g14.t1"; gene_id "g14"; scaffold_1_12683523-12686811 AUGUSTUS intron 643 973 1 + . transcript_id "g14.t1"; gene_id "g14"; scaffold_1_12683523-12686811 AUGUSTUS intron 1058 2275 0.66 + . transcript_id "g14.t1"; gene_id "g14"; scaffold_1_12683523-12686811 AUGUSTUS CDS 481 642 1 + 0 transcript_id "g14.t1"; gene_id "g14"; scaffold_1_12683523-12686811 AUGUSTUS CDS 974 1057 0.98 + 0 transcript_id "g14.t1"; gene_id "g14"; scaffold_1_12683523-12686811 AUGUSTUS CDS 2276 2689 0.78 + 0 transcript_id "g14.t1"; gene_id "g14"; scaffold_1_12683523-12686811 AUGUSTUS stop_codon 2687 2689 . + 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [EELQESYKEVVQELSGLEVQRETLLFQVDVLQDALEGVEEMLAEAQREASQTSMELEREREAKKKLEDMVNSLMQEVE # RLKELGSSVDLEDVGESTEDGQSPLSKLHRMVNKTFGQMSSLALGSSPSQEGVFVRPEESQTEGKRDTSPDSNNDTDSISAYEDACADTPELENVFPG # FSGLNGTGLTDGACPSAEEQDGDPTNTIQTSEARNPNDSCIVS] # end gene g14 ### # # ----- sequence number 16 (length = 3573, name = scaffold_1_12913844-12917416) ----- # # annotation: # Sequence scaffold_1_12913844-12917416 length=3573 scaffold_1_12913844-12917416 database start_codon 601 603 . + 0 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database intron 1435 1575 . + . transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database intron 1706 1840 . + . transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database intron 2005 2117 . + . transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database intron 2321 2428 . + . transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database intron 2608 2710 . + . transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database CDS 601 1434 . + 0 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database CDS 1576 1705 . + 0 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database CDS 1841 2004 . + 2 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database CDS 2118 2320 . + 0 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database CDS 2429 2607 . + 1 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database CDS 2711 2973 . + 2 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; scaffold_1_12913844-12917416 database stop_codon 2971 2973 . + 0 transcript_id "g_117-T1.1"; gene_id "g_117-T1"; # Predicted genes for sequence number 16 on both strands # start gene g15 scaffold_1_12913844-12917416 AUGUSTUS gene 601 2973 0.85 + . g15 scaffold_1_12913844-12917416 AUGUSTUS transcript 601 2973 0.85 + . g15.t1 scaffold_1_12913844-12917416 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS intron 1435 1575 1 + . transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS intron 1706 1840 1 + . transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS intron 2005 2117 0.99 + . transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS intron 2321 2428 1 + . transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS intron 2608 2710 1 + . transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS CDS 601 1434 0.86 + 0 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS CDS 1576 1705 1 + 0 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS CDS 1841 2004 1 + 2 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS CDS 2118 2320 0.99 + 0 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS CDS 2429 2607 1 + 1 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS CDS 2711 2973 1 + 2 transcript_id "g15.t1"; gene_id "g15"; scaffold_1_12913844-12917416 AUGUSTUS stop_codon 2971 2973 . + 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MPCVQTQYASLPYDNNYFSSEFLNPDLSAKLAMDISGQRDQLSASLPSINTLVGSSYMGEFDAYSCQVTTSTPSIVPS # SNGAVAGSTSPQAQHQAFKLDDLQVYGCYPGSFALSYLEETLSSCGSDYYGSPVSAATSPPTPGFQSQPTPAWDSPFSPYSPGPGCWVSDKTALAQQP # SYFTFTTPTEQHSPLGQHHTPQNCDEDAFFQSPQPQASPLHYPPMSLENSSLDNPGLLEGHMASPKTCSPGTNEGRCAVCGDNASCQHYGVRTCEGCK # GFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKTVSESAFTPPPVNIITSLVRAHIDSNPAIGKL # DYSKYQETVASLSEKEDANDIQQFYDLLSGTMDVIRKWAETIPGFTAFCPEDQELLLESAFVELFILRLAYRSSPEKNKLIFCNGVVLHRMQCVRGFG # DWIDSIMDFSQSLHRMNLDVSSFSCLAALVIITDRHGLKEPKRVEEFQNRLITCLRDHVTGSGSEQGRPQPNYLSRLLGKLPELRTLCTQGLQRIFYL # KLEDLVPPPPIVDKIFMDTLPF] # end gene g15 ### # # ----- sequence number 17 (length = 4126, name = scaffold_1_12940799-12944924) ----- # # annotation: # Sequence scaffold_1_12940799-12944924 length=4126 scaffold_1_12940799-12944924 database start_codon 601 603 . + 0 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database intron 1879 2056 . + . transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database intron 2164 2281 . + . transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database intron 2402 2533 . + . transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database intron 2695 2831 . + . transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database intron 2935 3228 . + . transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database CDS 601 1878 . + 0 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database CDS 2057 2163 . + 0 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database CDS 2282 2401 . + 1 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database CDS 2534 2694 . + 1 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database CDS 2832 2934 . + 2 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database CDS 3229 3526 . + 1 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; scaffold_1_12940799-12944924 database stop_codon 3524 3526 . + 0 transcript_id "g_119-T1.1"; gene_id "g_119-T1"; # Predicted genes for sequence number 17 on both strands # start gene g16 scaffold_1_12940799-12944924 AUGUSTUS gene 601 3526 0.34 + . g16 scaffold_1_12940799-12944924 AUGUSTUS transcript 601 3526 0.34 + . g16.t1 scaffold_1_12940799-12944924 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS intron 1879 2056 1 + . transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS intron 2164 2281 0.99 + . transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS intron 2402 2533 0.99 + . transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS intron 2695 2831 0.99 + . transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS intron 2935 3228 0.92 + . transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS CDS 601 1878 0.91 + 0 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS CDS 2057 2163 0.99 + 0 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS CDS 2282 2401 0.99 + 1 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS CDS 2534 2694 0.99 + 1 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS CDS 2832 2934 0.93 + 2 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS CDS 3229 3526 0.37 + 1 transcript_id "g16.t1"; gene_id "g16"; scaffold_1_12940799-12944924 AUGUSTUS stop_codon 3524 3526 . + 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MDLGVAEGEMESQTGVEKTLLSDVPLSSPKFTPDEREAGEDEADVPGEAVSEVEFTDNLRSNPQDTQSPVTFEDTFGN # IDVELSVTPEAEEEVGIQPETRVGQQELWGRETEEEAEEGSQNEAGKEQHMNGESGLRKEGAGRRGRPRHSGGGINTEHTSHTTPSSTSPSYPLKGSL # PSSGGRHKQARRRNHHHHQGRGRRRMGTQLALTLRELMSESLSPWCISCIHMVVELIVTVTHHCGVCVETGAVVLYDFGSQLLAKMTDIPGLKADVGR # TVDRARDIGTVIINTSLKSIRGVQQASASYFGLFCSVVLLGTQWAKNTLVRLGGERGRRVWTAIQDSRVWRGVASMAERFSGWFKRRVTQFPESTPES # PGGTGRVQAGQELDRLLALALVPEDELDPFTVLGVEAHATEAELKRAYRQLAVQVHPDKNKHPRAGEAFKVLRAAWDVVSNPETRREYEMKRMAATEL # SKSMNEFLTKLQDDLKEAMNTMMCTKCEGKHKRFEMDREPAEARFCAECNRRHSAEEGDLWAESSMLGLRITYFACMDGKVYDITEWAGCQRIGISPD # THRVPYHISFGSKNNGSSTRQRTPSEHPPGPSSPADLQDFFNRIFQGGPPSDLTANGGFFPSGPPPHHPPGAGPSGPFTPPPPQTGFFMPGGQRPEPS # ETWTEAGKPPRRRKKVRKPFQR] # end gene g16 ### # # ----- sequence number 18 (length = 5068, name = scaffold_1_14435280-14440347) ----- # # annotation: # Sequence scaffold_1_14435280-14440347 length=5068 scaffold_1_14435280-14440347 database start_codon 601 603 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 844 1595 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 1661 1748 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 2056 2207 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 2418 2508 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 2702 2809 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 2910 3003 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 3143 3547 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 3668 3783 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database intron 4030 4285 . + . transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 601 843 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 1596 1660 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 1749 2055 . + 1 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 2208 2417 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 2509 2701 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 2810 2909 . + 2 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 3004 3142 . + 1 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 3548 3667 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 3784 4029 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database CDS 4286 4468 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; scaffold_1_14435280-14440347 database stop_codon 4466 4468 . + 0 transcript_id "g_163-T1.1"; gene_id "g_163-T1"; # Predicted genes for sequence number 18 on both strands # start gene g17 scaffold_1_14435280-14440347 AUGUSTUS gene 601 4468 0.9 + . g17 scaffold_1_14435280-14440347 AUGUSTUS transcript 601 4468 0.9 + . g17.t1 scaffold_1_14435280-14440347 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 844 1595 0.96 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 1661 1748 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 2056 2207 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 2418 2508 0.97 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 2702 2809 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 2910 3003 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 3143 3547 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 3668 3783 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS intron 4030 4285 1 + . transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 601 843 0.92 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 1596 1660 1 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 1749 2055 1 + 1 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 2208 2417 1 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 2509 2701 0.97 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 2810 2909 1 + 2 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 3004 3142 1 + 1 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 3548 3667 1 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 3784 4029 1 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS CDS 4286 4468 1 + 0 transcript_id "g17.t1"; gene_id "g17"; scaffold_1_14435280-14440347 AUGUSTUS stop_codon 4466 4468 . + 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MAQKNRLLGCIYLLVITALGQRVAANGLVNDEVKRTVDLSTHLAKITAEIVLSNQGDSAVQTFILAVEPDLVSHLAYI # GASVKGDEEEDGILELKQTTLQGQSGEFYKVQLPSSLASGAKLRVKVETVFSHVLKPFPSHITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTV # ESYTKLGNPSKNDEVIEYGPFRDIGAFSEDAMKVHYENNSPFLTISSITRTIEVSHWGNIAVEETIDLRHTGASLKGPFSRYDYQRQSDSGISSVKSF # KTILPASAQDVYYRDEIGNISTSHLQILEDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVIDSLTVKLILPEGA # RNIHVDTPYPIDRIPDQLHYTYLDTFGRPVLVASKNNLVEQHIQDVVVHYNFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFAITKDPAAEVRMKVA # SITEQVLTLVNKRLGLYRHMDEVVNRYKQSRDTGALNSGRKTLEADHRTLTNDISSLQARLKAEGSDLADKVGEVQKLDGQVKELVCRSCQEAERLVA # GKVKKEAYIENEKGLASKRQELITRIDSLLDAL] # end gene g17 ### # # ----- sequence number 19 (length = 2253, name = scaffold_1_16532904-16535156) ----- # # annotation: # Sequence scaffold_1_16532904-16535156 length=2253 scaffold_1_16532904-16535156 database start_codon 601 603 . + 0 transcript_id "g_143-T1.1"; gene_id "g_143-T1"; scaffold_1_16532904-16535156 database intron 757 1172 . + . transcript_id "g_143-T1.1"; gene_id "g_143-T1"; scaffold_1_16532904-16535156 database intron 1295 1532 . + . transcript_id "g_143-T1.1"; gene_id "g_143-T1"; scaffold_1_16532904-16535156 database CDS 601 756 . + 0 transcript_id "g_143-T1.1"; gene_id "g_143-T1"; scaffold_1_16532904-16535156 database CDS 1173 1294 . + 0 transcript_id "g_143-T1.1"; gene_id "g_143-T1"; scaffold_1_16532904-16535156 database CDS 1533 1653 . + 1 transcript_id "g_143-T1.1"; gene_id "g_143-T1"; scaffold_1_16532904-16535156 database stop_codon 1651 1653 . + 0 transcript_id "g_143-T1.1"; gene_id "g_143-T1"; # Predicted genes for sequence number 19 on both strands # start gene g18 scaffold_1_16532904-16535156 AUGUSTUS gene 1 153 0.46 - . g18 scaffold_1_16532904-16535156 AUGUSTUS transcript 1 153 0.46 - . g18.t1 scaffold_1_16532904-16535156 AUGUSTUS intron 1 91 0.46 - . transcript_id "g18.t1"; gene_id "g18"; scaffold_1_16532904-16535156 AUGUSTUS CDS 92 153 0.46 - 0 transcript_id "g18.t1"; gene_id "g18"; scaffold_1_16532904-16535156 AUGUSTUS start_codon 151 153 . - 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MDRDLYRQHTAWISSTAPEN] # end gene g18 ### # start gene g19 scaffold_1_16532904-16535156 AUGUSTUS gene 252 1653 0.26 + . g19 scaffold_1_16532904-16535156 AUGUSTUS transcript 252 1653 0.26 + . g19.t1 scaffold_1_16532904-16535156 AUGUSTUS start_codon 252 254 . + 0 transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS intron 260 428 0.55 + . transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS intron 757 1172 1 + . transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS intron 1295 1532 0.76 + . transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS CDS 252 259 0.77 + 0 transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS CDS 429 756 0.56 + 1 transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS CDS 1173 1294 1 + 0 transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS CDS 1533 1653 0.61 + 1 transcript_id "g19.t1"; gene_id "g19"; scaffold_1_16532904-16535156 AUGUSTUS stop_codon 1651 1653 . + 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MDLEAKAAYPPASKSLTPTRTTIEPFEPAGPDHLNPDTGACIPLSPSLSAFSSSRVLLFAMDTAAVVTVLALVLTVAG # VGQALQMQEDGVLNRENLMPGSSEDNMAEQLMELESEEVGGNGLEERMLLSSLLRSLLIGPQRHARNSVLHQPQRFGRGARGGLLSDERIQSRDWEAA # PGQIWSMAVPQRFGRK] # end gene g19 ### # # ----- sequence number 20 (length = 3763, name = scaffold_1_18324862-18328624) ----- # # annotation: # Sequence scaffold_1_18324862-18328624 length=3763 scaffold_1_18324862-18328624 database start_codon 601 603 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 762 892 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 994 1145 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 1213 1315 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 1416 1543 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 1661 1824 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 1981 2176 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 2247 2457 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database intron 2601 3133 . + . transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 601 761 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 893 993 . + 1 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 1146 1212 . + 2 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 1316 1415 . + 1 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 1544 1660 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 1825 1980 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 2177 2246 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 2458 2600 . + 2 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database CDS 3134 3163 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; scaffold_1_18324862-18328624 database stop_codon 3161 3163 . + 0 transcript_id "g_147-T1.1"; gene_id "g_147-T1"; # Predicted genes for sequence number 20 on both strands # start gene g20 scaffold_1_18324862-18328624 AUGUSTUS gene 1 3163 0.15 + . g20 scaffold_1_18324862-18328624 AUGUSTUS transcript 1 3163 0.15 + . g20.t1 scaffold_1_18324862-18328624 AUGUSTUS intron 1 91 0.47 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 146 892 0.59 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 994 1145 1 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 1213 1315 0.98 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 1416 1543 1 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 1661 1824 1 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 1981 2176 1 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 2247 2457 1 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS intron 2601 3133 0.6 + . transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 92 145 0.47 + 1 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 893 993 0.98 + 1 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 1146 1212 1 + 2 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 1316 1415 0.98 + 1 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 1544 1660 1 + 0 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 1825 1980 1 + 0 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 2177 2246 1 + 0 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 2458 2600 1 + 2 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS CDS 3134 3163 0.6 + 0 transcript_id "g20.t1"; gene_id "g20"; scaffold_1_18324862-18328624 AUGUSTUS stop_codon 3161 3163 . + 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [SDMCPHEHGYYSRRYVTTPTRTLYSKKYGVDLIRYTNKDADTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTARVVAL # SVSPVDDKFISSSLDNTIRLWDLRSPNCQGLTNPLGKPVCCFDPEGLIFAAGVNSEMINLYDIRSFDKGPFSSFETQFSRVCEWTGLKFSKDGKQILI # SSNGGAIRVLDAFDGSVLHTFSGYNNTRGISLEACFTPDSKFVMIGSEDGRIHMWSTESGMKIAVLDGKHSGPINTLQFNPKYMTFASACTNMAFWLP # CVND] # end gene g20 ### # # ----- sequence number 21 (length = 4737, name = scaffold_1_20753825-20758561) ----- # # annotation: # Sequence scaffold_1_20753825-20758561 length=4737 scaffold_1_20753825-20758561 database start_codon 601 603 . + 0 transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database intron 652 1349 . + . transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database intron 1400 3245 . + . transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database intron 3504 4025 . + . transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database CDS 601 651 . + 0 transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database CDS 1350 1399 . + 0 transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database CDS 3246 3503 . + 1 transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database CDS 4026 4137 . + 1 transcript_id "g_155-T1.1"; gene_id "g_155-T1"; scaffold_1_20753825-20758561 database stop_codon 4135 4137 . + 0 transcript_id "g_155-T1.1"; gene_id "g_155-T1"; # Predicted genes for sequence number 21 on both strands # start gene g21 scaffold_1_20753825-20758561 AUGUSTUS gene 1596 2689 0.6 - . g21 scaffold_1_20753825-20758561 AUGUSTUS transcript 1596 2689 0.6 - . g21.t1 scaffold_1_20753825-20758561 AUGUSTUS stop_codon 1596 1598 . - 0 transcript_id "g21.t1"; gene_id "g21"; scaffold_1_20753825-20758561 AUGUSTUS intron 1627 2174 0.6 - . transcript_id "g21.t1"; gene_id "g21"; scaffold_1_20753825-20758561 AUGUSTUS CDS 1596 1626 0.62 - 1 transcript_id "g21.t1"; gene_id "g21"; scaffold_1_20753825-20758561 AUGUSTUS CDS 2175 2689 0.95 - 0 transcript_id "g21.t1"; gene_id "g21"; scaffold_1_20753825-20758561 AUGUSTUS start_codon 2687 2689 . - 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MLVDFRRRHSTAPSPVNIQGKDIERVDAYKYLGVHLNHKLDWTHNTDALYRKSQSQLYLLRRLRSFGASGPLLRTFYD # SVVASAVLYGVVCWSSSITERERKKLDKVIEKSSSVLGCALDSVREVGDRRVLAKLKSMLDHESHPLQDAMSALESSFSDRLIHPRCMKERFRRSLSQ # LQGTP] # end gene g21 ### # start gene g22 scaffold_1_20753825-20758561 AUGUSTUS gene 2860 4137 0.45 + . g22 scaffold_1_20753825-20758561 AUGUSTUS transcript 2860 4137 0.45 + . g22.t1 scaffold_1_20753825-20758561 AUGUSTUS start_codon 2860 2862 . + 0 transcript_id "g22.t1"; gene_id "g22"; scaffold_1_20753825-20758561 AUGUSTUS intron 2868 3245 0.47 + . transcript_id "g22.t1"; gene_id "g22"; scaffold_1_20753825-20758561 AUGUSTUS intron 3504 4025 0.98 + . transcript_id "g22.t1"; gene_id "g22"; scaffold_1_20753825-20758561 AUGUSTUS CDS 2860 2867 0.47 + 0 transcript_id "g22.t1"; gene_id "g22"; scaffold_1_20753825-20758561 AUGUSTUS CDS 3246 3503 0.81 + 1 transcript_id "g22.t1"; gene_id "g22"; scaffold_1_20753825-20758561 AUGUSTUS CDS 4026 4137 0.99 + 1 transcript_id "g22.t1"; gene_id "g22"; scaffold_1_20753825-20758561 AUGUSTUS stop_codon 4135 4137 . + 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MSMKPASNSLLRTAIVIQDDSLPAAPPPQIRILKRPTRNGSVGSSAASSRPSQQVKSLAQREAEYAEARLRILGSSSF # EDTQDKTNVDRVVRVTAPPPSETARSNSQVIRQPIGPDDTIGFRHSR] # end gene g22 ### # start gene g23 scaffold_1_20753825-20758561 AUGUSTUS gene 4392 4737 0.52 - . g23 scaffold_1_20753825-20758561 AUGUSTUS transcript 4392 4737 0.52 - . g23.t1 scaffold_1_20753825-20758561 AUGUSTUS stop_codon 4392 4394 . - 0 transcript_id "g23.t1"; gene_id "g23"; scaffold_1_20753825-20758561 AUGUSTUS intron 4625 4737 0.52 - . transcript_id "g23.t1"; gene_id "g23"; scaffold_1_20753825-20758561 AUGUSTUS CDS 4392 4624 0.52 - 2 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [PGHSVELRVDLAQCYTPATEDPGHSVELRVDLAQCYTPATVDPGHSVELRVDLAQCYTPVTVDPGHSVELRVDLVL] # end gene g23 ### # # ----- sequence number 22 (length = 2129, name = scaffold_2_3741015-3743143) ----- # # annotation: # Sequence scaffold_2_3741015-3743143 length=2129 scaffold_2_3741015-3743143 database start_codon 601 603 . + 0 transcript_id "g_1270-T1.1"; gene_id "g_1270-T1"; scaffold_2_3741015-3743143 database intron 1184 1371 . + . transcript_id "g_1270-T1.1"; gene_id "g_1270-T1"; scaffold_2_3741015-3743143 database CDS 601 1183 . + 0 transcript_id "g_1270-T1.1"; gene_id "g_1270-T1"; scaffold_2_3741015-3743143 database CDS 1372 1529 . + 2 transcript_id "g_1270-T1.1"; gene_id "g_1270-T1"; scaffold_2_3741015-3743143 database stop_codon 1527 1529 . + 0 transcript_id "g_1270-T1.1"; gene_id "g_1270-T1"; # Predicted genes for sequence number 22 on both strands # start gene g24 scaffold_2_3741015-3743143 AUGUSTUS gene 601 1529 0.71 + . g24 scaffold_2_3741015-3743143 AUGUSTUS transcript 601 1529 0.71 + . g24.t1 scaffold_2_3741015-3743143 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g24.t1"; gene_id "g24"; scaffold_2_3741015-3743143 AUGUSTUS intron 1184 1371 1 + . transcript_id "g24.t1"; gene_id "g24"; scaffold_2_3741015-3743143 AUGUSTUS CDS 601 1183 0.71 + 0 transcript_id "g24.t1"; gene_id "g24"; scaffold_2_3741015-3743143 AUGUSTUS CDS 1372 1529 1 + 2 transcript_id "g24.t1"; gene_id "g24"; scaffold_2_3741015-3743143 AUGUSTUS stop_codon 1527 1529 . + 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MNRALCSALLLSRVGRQCSPHLSGGVFNEPWAAVPTTLLRSYSSNVKVRSYLQYIKHKIRPPPRPPYPHVCQVGDPVL # RSHAAPVDPSAVLGSEVQEVIGTMVKVMRKLQCVGLSAPQVGVPLRILALEFPESMLKDLSPAVREARGVVAFPLRVFINPQLRVLDRRTILFQEACE # SISGFSARVPRFLEVEVSGLNEKAEPVTWQVSGWPARIVQHELDHLDGVLYIDRMDTKTFINIKWEEHNE] # end gene g24 ### # # ----- sequence number 23 (length = 2395, name = scaffold_2_4007669-4010063) ----- # # annotation: # Sequence scaffold_2_4007669-4010063 length=2395 scaffold_2_4007669-4010063 database start_codon 601 603 . + 0 transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database intron 763 839 . + . transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database intron 973 1449 . + . transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database intron 1578 1702 . + . transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database CDS 601 762 . + 0 transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database CDS 840 972 . + 0 transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database CDS 1450 1577 . + 2 transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database CDS 1703 1795 . + 0 transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; scaffold_2_4007669-4010063 database stop_codon 1793 1795 . + 0 transcript_id "g_1273-T1.1"; gene_id "g_1273-T1"; # Predicted genes for sequence number 23 on both strands # start gene g25 scaffold_2_4007669-4010063 AUGUSTUS gene 143 1795 0.7 + . g25 scaffold_2_4007669-4010063 AUGUSTUS transcript 143 1795 0.7 + . g25.t1 scaffold_2_4007669-4010063 AUGUSTUS start_codon 143 145 . + 0 transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS intron 155 839 0.72 + . transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS intron 973 1449 1 + . transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS intron 1578 1702 0.98 + . transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS CDS 143 154 0.72 + 0 transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS CDS 840 972 0.88 + 0 transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS CDS 1450 1577 0.98 + 2 transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS CDS 1703 1795 0.98 + 0 transcript_id "g25.t1"; gene_id "g25"; scaffold_2_4007669-4010063 AUGUSTUS stop_codon 1793 1795 . + 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MVQKCKGSQNKKSEETRVSPSGPVACNKSGNVTISVHAKPGSKQNAITDVTAEAVGVAIAAPPTDGEANSELVRYLSK # VLDLKKSEVILDKGCRSREKVIKLSGSLTPEEVLERLKKEAAG] # end gene g25 ### # # ----- sequence number 24 (length = 7485, name = scaffold_2_4677903-4685387) ----- # # annotation: # Sequence scaffold_2_4677903-4685387 length=7485 scaffold_2_4677903-4685387 database start_codon 601 603 . + 0 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 647 896 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 1045 1627 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 1649 1732 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 1766 2124 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 2155 2511 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 2670 3017 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 3098 3213 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 3307 3479 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 3598 3884 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 4035 4118 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 4366 4629 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 4737 4838 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 4990 5129 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 5216 5827 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 5937 6159 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 6254 6493 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database intron 6579 6727 . + . transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 601 646 . + 0 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 897 1044 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 1628 1648 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 1733 1765 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 2125 2154 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 2512 2669 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 3018 3097 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 3214 3306 . + 0 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 3480 3597 . + 0 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 3885 4034 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 4119 4365 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 4630 4736 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 4839 4989 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 5130 5215 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 5828 5936 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 6160 6253 . + 1 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 6494 6578 . + 0 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database CDS 6728 6885 . + 2 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; scaffold_2_4677903-4685387 database stop_codon 6883 6885 . + 0 transcript_id "g_1278-T1.1"; gene_id "g_1278-T1"; # Predicted genes for sequence number 24 on both strands # start gene g26 scaffold_2_4677903-4685387 AUGUSTUS gene 601 6885 0.11 + . g26 scaffold_2_4677903-4685387 AUGUSTUS transcript 601 6885 0.11 + . g26.t1 scaffold_2_4677903-4685387 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 647 896 0.8 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 1045 1627 0.76 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 1649 1732 0.76 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 1766 2124 0.63 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 2155 2511 0.63 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 2670 3017 0.9 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 3098 3213 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 3307 3479 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 3598 3884 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 4035 4118 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 4366 4629 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 4737 4838 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 4990 5129 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 5216 5430 0.62 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 5611 5827 0.96 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 5937 6159 0.99 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 6254 6493 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS intron 6579 6727 1 + . transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 601 646 0.43 + 0 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 897 1044 0.83 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 1628 1648 0.76 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 1733 1765 1 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 2125 2154 0.63 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 2512 2669 0.9 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 3018 3097 1 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 3214 3306 1 + 0 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 3480 3597 1 + 0 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 3885 4034 1 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 4119 4365 1 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 4630 4736 1 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 4839 4989 1 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 5130 5215 1 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 5431 5610 0.62 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 5828 5936 1 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 6160 6253 0.99 + 1 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 6494 6578 1 + 0 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS CDS 6728 6885 1 + 2 transcript_id "g26.t1"; gene_id "g26"; scaffold_2_4677903-4685387 AUGUSTUS stop_codon 6883 6885 . + 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MEGDAFETEDVMNICDDLMADQRMDITSTMNEFMSPSSTDLISSSLHPPGMDFTRKRKGSTSDYQIDGFSFDDMDSDK # DKLGGDHHGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRASDG # FLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPSPSRLCSGARRSFFCRMKCNR # PSVKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIIPQPAHIDIRVKPTEYVSRHAIDGKFVFV # DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCSVLEGGDP # SYPQSAASPQSMDSVLTSEALIPYLLPHSPYPLPSTSQPISPTFYLTALIPYLLPHSPYPLPSTSQPIPHSPYLLAPIPXGGRRALQTVPGIPGGTRA # GAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNITSTPPPDTCSPGGKKIQNGGTPDLSLAGVIPGPDSVGYPYSVMSDASHPSIDIMDEPGSSSPSN # DEAAMAVIMSLLEADAGLGGPVDFSDLPWPL] # end gene g26 ### # # ----- sequence number 25 (length = 6952, name = scaffold_2_6109408-6116359) ----- # # annotation: # Sequence scaffold_2_6109408-6116359 length=6952 scaffold_2_6109408-6116359 database start_codon 601 603 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 626 1757 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 1839 1967 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 2147 2872 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 2969 3103 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 3209 4780 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 4907 5318 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 5470 5910 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database intron 6033 6184 . + . transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 601 625 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 1758 1838 . + 2 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 1968 2146 . + 2 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 2873 2968 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 3104 3208 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 4781 4906 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 5319 5469 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 5911 6032 . + 2 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database CDS 6185 6352 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; scaffold_2_6109408-6116359 database stop_codon 6350 6352 . + 0 transcript_id "g_1282-T1.1"; gene_id "g_1282-T1"; # Predicted genes for sequence number 25 on both strands # start gene g27 scaffold_2_6109408-6116359 AUGUSTUS gene 2885 6352 0.75 + . g27 scaffold_2_6109408-6116359 AUGUSTUS transcript 2885 6352 0.75 + . g27.t1 scaffold_2_6109408-6116359 AUGUSTUS start_codon 2885 2887 . + 0 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS intron 2969 3103 1 + . transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS intron 3209 4780 1 + . transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS intron 4907 5318 1 + . transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS intron 5470 5910 1 + . transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS intron 6033 6184 1 + . transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS CDS 2885 2968 0.75 + 0 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS CDS 3104 3208 1 + 0 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS CDS 4781 4906 1 + 0 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS CDS 5319 5469 1 + 0 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS CDS 5911 6032 1 + 2 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS CDS 6185 6352 1 + 0 transcript_id "g27.t1"; gene_id "g27"; scaffold_2_6109408-6116359 AUGUSTUS stop_codon 6350 6352 . + 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MLYAATRATLKKEFGGGHIKDEIFGTSKDEMCLKGYKKYLTSQAAPLPLTAAEEELRKIKLNEVQTDISVDTKQQTLQ # GVAFPMHGDAVEALERFRDKKVNYVQLEIDFEKELIRLTNTDPTELKDLPKRIPKDTARYHFFLYKHSHEGDYLESTVFIYSMPGYKCSIKERMLYSS # CKNPLVDMVENNLQMEIEKKLEIENGEELTGDFLYEEVHPKQHAHKQAFAKPKGPAGKRGGRRITRQPGDGEEDD] # end gene g27 ### # # ----- sequence number 26 (length = 4239, name = scaffold_2_6651294-6655532) ----- # # annotation: # Sequence scaffold_2_6651294-6655532 length=4239 scaffold_2_6651294-6655532 database start_codon 601 603 . + 0 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 656 948 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 1052 1306 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 1438 1607 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 1693 1790 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 1877 2025 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 2222 2465 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 2576 3275 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database intron 3340 3473 . + . transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 601 655 . + 0 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 949 1051 . + 2 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 1307 1437 . + 1 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 1608 1692 . + 2 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 1791 1876 . + 1 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 2026 2221 . + 2 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 2466 2575 . + 1 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 3276 3339 . + 2 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database CDS 3474 3639 . + 1 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; scaffold_2_6651294-6655532 database stop_codon 3637 3639 . + 0 transcript_id "g_1286-T1.1"; gene_id "g_1286-T1"; # Predicted genes for sequence number 26 on both strands # start gene g28 scaffold_2_6651294-6655532 AUGUSTUS gene 613 3639 0.53 + . g28 scaffold_2_6651294-6655532 AUGUSTUS transcript 613 3639 0.53 + . g28.t1 scaffold_2_6651294-6655532 AUGUSTUS start_codon 613 615 . + 0 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 656 948 0.87 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 1052 1306 1 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 1438 1607 1 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 1693 1790 1 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 1877 2025 0.91 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 2222 2465 1 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 2576 3275 1 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS intron 3340 3473 1 + . transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 613 655 0.61 + 0 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 949 1051 0.98 + 2 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 1307 1437 1 + 1 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 1608 1692 1 + 2 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 1791 1876 1 + 1 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 2026 2221 0.91 + 2 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 2466 2575 1 + 1 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 3276 3339 1 + 2 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS CDS 3474 3639 1 + 1 transcript_id "g28.t1"; gene_id "g28"; scaffold_2_6651294-6655532 AUGUSTUS stop_codon 3637 3639 . + 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MNRFNTALSVDDYLGETNVLFYLNDAVTQLLEHKEEYIQFGLVRYFAEYFSSVKNGNHVLFREFSYIKATPHNRASFI # RVFWRCYRQIGKNGDLLAMLEYSSLLQLLCPDFPLEMVQNAARIVLMEDALDSLLSFSDFLYSFQLQFYFGEFLESVSMIYQDLLSGKSPNTVIVPTS # TSVEQLHPVAAEEDDTQEGVDSSLFGDCIEGLCERFKYSHPSTLAIREVLEQSQKVSFYSYLMALARHEDINQDIGALPNKSELLIDPEMDQEVEKLI # SQVAISPTSNSSSSAPGLKEPPRKASPRKSLHHRKRIEMESDGSTEETDSSEN] # end gene g28 ### # # ----- sequence number 27 (length = 2557, name = scaffold_2_7218189-7220745) ----- # # annotation: # Sequence scaffold_2_7218189-7220745 length=2557 scaffold_2_7218189-7220745 database start_codon 601 603 . + 0 transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database intron 629 730 . + . transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database intron 800 1614 . + . transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database intron 1735 1850 . + . transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database CDS 601 628 . + 0 transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database CDS 731 799 . + 2 transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database CDS 1615 1734 . + 2 transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database CDS 1851 1957 . + 2 transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; scaffold_2_7218189-7220745 database stop_codon 1955 1957 . + 0 transcript_id "g_1290-T1.1"; gene_id "g_1290-T1"; # Predicted genes for sequence number 27 on both strands # (none) # # ----- sequence number 28 (length = 2719, name = scaffold_2_7874906-7877624) ----- # # annotation: # Sequence scaffold_2_7874906-7877624 length=2719 scaffold_2_7874906-7877624 database start_codon 601 603 . + 0 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database intron 656 742 . + . transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database intron 940 1035 . + . transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database intron 1150 1359 . + . transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database intron 1454 1540 . + . transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database intron 1684 1975 . + . transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database CDS 601 655 . + 0 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database CDS 743 939 . + 2 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database CDS 1036 1149 . + 0 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database CDS 1360 1453 . + 0 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database CDS 1541 1683 . + 2 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database CDS 1976 2119 . + 0 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; scaffold_2_7874906-7877624 database stop_codon 2117 2119 . + 0 transcript_id "g_1293-T1.1"; gene_id "g_1293-T1"; # Predicted genes for sequence number 28 on both strands # start gene g29 scaffold_2_7874906-7877624 AUGUSTUS gene 601 1803 0.54 + . g29 scaffold_2_7874906-7877624 AUGUSTUS transcript 601 1803 0.54 + . g29.t1 scaffold_2_7874906-7877624 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS intron 656 742 0.94 + . transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS intron 940 1035 0.97 + . transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS intron 1150 1359 0.99 + . transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS intron 1454 1540 0.99 + . transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS intron 1684 1791 0.63 + . transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS CDS 601 655 0.9 + 0 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS CDS 743 939 0.91 + 2 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS CDS 1036 1149 0.99 + 0 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS CDS 1360 1453 0.99 + 0 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS CDS 1541 1683 0.99 + 2 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS CDS 1792 1803 0.63 + 0 transcript_id "g29.t1"; gene_id "g29"; scaffold_2_7874906-7877624 AUGUSTUS stop_codon 1801 1803 . + 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MLDIVKMIDKDSDKYLSPEEITLWIQRVYRKYALEDAEERFPEFDTNKDGIVAWDEYNLVVHKHISDTDEHTVLHDPE # EESLRFLHMKEKRRFDFADVDGTPGLNVTEFLAFTHPSEVDHMADFAIEGVLSEYDIDKDGFISLREFIGEARSNEDSELSQWEIEESVRFQDLYDQD # RDGKLNREEQLRWVAPNSYSSAREETCC] # end gene g29 ### # # ----- sequence number 29 (length = 2883, name = scaffold_2_9790228-9793110) ----- # # annotation: # Sequence scaffold_2_9790228-9793110 length=2883 scaffold_2_9790228-9793110 database start_codon 601 603 . + 0 transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database intron 775 941 . + . transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database intron 1116 1580 . + . transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database intron 1692 2082 . + . transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database CDS 601 774 . + 0 transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database CDS 942 1115 . + 0 transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database CDS 1581 1691 . + 0 transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database CDS 2083 2283 . + 0 transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; scaffold_2_9790228-9793110 database stop_codon 2281 2283 . + 0 transcript_id "g_1307-T1.1"; gene_id "g_1307-T1"; # Predicted genes for sequence number 29 on both strands # start gene g30 scaffold_2_9790228-9793110 AUGUSTUS gene 1 2283 1 + . g30 scaffold_2_9790228-9793110 AUGUSTUS transcript 1 2283 1 + . g30.t1 scaffold_2_9790228-9793110 AUGUSTUS intron 1 147 1 + . transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS intron 312 653 1 + . transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS intron 775 941 1 + . transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS intron 1116 1580 1 + . transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS intron 1692 2082 1 + . transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS CDS 148 311 1 + 0 transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS CDS 654 774 1 + 1 transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS CDS 942 1115 1 + 0 transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS CDS 1581 1691 1 + 0 transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS CDS 2083 2283 1 + 0 transcript_id "g30.t1"; gene_id "g30"; scaffold_2_9790228-9793110 AUGUSTUS stop_codon 2281 2283 . + 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [VTGFDSVDDESKHSDHMFSYKSPKPEEWTTDDNPPYTYYLFHMYANIMVLNNLRKERGLSTFQFRPHCGEAGSITHLV # SAFLTADNISHGLNLKKSPVLQYLYYLAQVPIAMSPLSNNSLFLEYSKNPLKEFLHKGLCVSLSTDDPMQFHYTKEALMEEYAIAAQLWKLSTCDVCE # IARNSVLQSGLSHQEKKHFLGPNYLKDGPEGNDIRRTNVAQIRLAYRHETLCNELSFLVDAVKTEAAAALAMSQAASQKQ] # end gene g30 ### # # ----- sequence number 30 (length = 2190, name = scaffold_2_10879953-10882142) ----- # # annotation: # Sequence scaffold_2_10879953-10882142 length=2190 scaffold_2_10879953-10882142 database start_codon 601 603 . + 0 transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database intron 648 900 . + . transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database intron 992 1130 . + . transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database intron 1200 1482 . + . transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database CDS 601 647 . + 0 transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database CDS 901 991 . + 1 transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database CDS 1131 1199 . + 0 transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database CDS 1483 1590 . + 0 transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; scaffold_2_10879953-10882142 database stop_codon 1588 1590 . + 0 transcript_id "g_1315-T1.1"; gene_id "g_1315-T1"; # Predicted genes for sequence number 30 on both strands # start gene g31 scaffold_2_10879953-10882142 AUGUSTUS gene 1 1590 0.67 + . g31 scaffold_2_10879953-10882142 AUGUSTUS transcript 1 1590 0.67 + . g31.t1 scaffold_2_10879953-10882142 AUGUSTUS intron 1 174 0.99 + . transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS intron 323 553 1 + . transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS intron 648 900 1 + . transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS intron 992 1482 0.68 + . transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS CDS 175 322 0.99 + 0 transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS CDS 554 647 1 + 2 transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS CDS 901 991 1 + 1 transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS CDS 1483 1590 1 + 0 transcript_id "g31.t1"; gene_id "g31"; scaffold_2_10879953-10882142 AUGUSTUS stop_codon 1588 1590 . + 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [IQPTVARGSLATGLPLGISREEDGGRAFSTKKGAFHEVFNLSEAERPLAVCENGWRCCLINRDRKMPTDYIRNGVLYV # TENYLCFESSSSRSSASKKNKVIKLVDITDIQKPLVFGAMIHRDEAFEAIFTQYMKILTMGAASSPET] # end gene g31 ### # # ----- sequence number 31 (length = 3841, name = scaffold_2_15651345-15655185) ----- # # annotation: # Sequence scaffold_2_15651345-15655185 length=3841 scaffold_2_15651345-15655185 database start_codon 601 603 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 682 1104 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 1148 1277 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 1352 1564 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 1730 1846 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 1896 2002 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 2114 2236 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 2365 2535 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 2649 2765 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 2873 2957 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database intron 3090 3164 . + . transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 601 681 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 1105 1147 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 1278 1351 . + 2 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 1565 1729 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 1847 1895 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 2003 2113 . + 2 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 2237 2364 . + 2 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 2536 2648 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 2766 2872 . + 1 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 2958 3089 . + 2 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database CDS 3165 3241 . + 2 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; scaffold_2_15651345-15655185 database stop_codon 3239 3241 . + 0 transcript_id "g_1352-T1.1"; gene_id "g_1352-T1"; # Predicted genes for sequence number 31 on both strands # start gene g32 scaffold_2_15651345-15655185 AUGUSTUS gene 601 3241 0.74 + . g32 scaffold_2_15651345-15655185 AUGUSTUS transcript 601 3241 0.74 + . g32.t1 scaffold_2_15651345-15655185 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 682 1104 0.99 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 1148 1277 0.99 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 1352 1564 0.99 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 1730 1846 0.98 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 1896 2002 0.96 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 2114 2236 0.87 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 2365 2535 1 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 2649 2765 0.99 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 2873 2957 1 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS intron 3090 3164 0.95 + . transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 601 681 0.93 + 0 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 1105 1147 0.99 + 0 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 1278 1351 0.99 + 2 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 1565 1729 0.99 + 0 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 1847 1895 0.98 + 0 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 2003 2113 0.96 + 2 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 2237 2364 0.89 + 2 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 2536 2648 1 + 0 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 2766 2872 0.99 + 1 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 2958 3089 0.95 + 2 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS CDS 3165 3241 0.95 + 2 transcript_id "g32.t1"; gene_id "g32"; scaffold_2_15651345-15655185 AUGUSTUS stop_codon 3239 3241 . + 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MQTLTPHVYWAQRHEEIHLRVELIDAQNIDIRVQDNALTFRAQGHGAKGENNYEFSLSFLMPVKPECVHKSTQRQVNI # TLKKQDWSWWDRLTLEERKPIFLTPDFDRWLDESDAEREMYEKEEKKSRLLTDAVNSELSFVSPKTGLLFMYNLVQFLGFSWIFVNMTVRLFILGQDS # VYDTFHTISDVMFFCQILAAVEVLNAAFGVVKTGVIPTLIQVVGRNFILFIIFGSVEQMHNKPVVFFVFYAWSAIEIFRYPFYMLGCIDTEWKLLTWL # RYTIWIPLYPLGVVAEAVAVIQSIPIFYDTKLFSIPLPQALGTSLNFSYVLQGYLVLMFLGLFVNFRHLYKQRKRRFRTKKRKAN] # end gene g32 ### # # ----- sequence number 32 (length = 2115, name = scaffold_2_15685830-15687944) ----- # # annotation: # Sequence scaffold_2_15685830-15687944 length=2115 scaffold_2_15685830-15687944 database start_codon 601 603 . + 0 transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; scaffold_2_15685830-15687944 database intron 691 778 . + . transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; scaffold_2_15685830-15687944 database intron 854 1299 . + . transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; scaffold_2_15685830-15687944 database CDS 601 690 . + 0 transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; scaffold_2_15685830-15687944 database CDS 779 853 . + 0 transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; scaffold_2_15685830-15687944 database CDS 1300 1515 . + 0 transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; scaffold_2_15685830-15687944 database stop_codon 1513 1515 . + 0 transcript_id "g_1353-T1.1"; gene_id "g_1353-T1"; # Predicted genes for sequence number 32 on both strands # start gene g33 scaffold_2_15685830-15687944 AUGUSTUS gene 601 1515 0.56 + . g33 scaffold_2_15685830-15687944 AUGUSTUS transcript 601 1515 0.56 + . g33.t1 scaffold_2_15685830-15687944 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g33.t1"; gene_id "g33"; scaffold_2_15685830-15687944 AUGUSTUS intron 691 778 0.56 + . transcript_id "g33.t1"; gene_id "g33"; scaffold_2_15685830-15687944 AUGUSTUS intron 854 1299 0.56 + . transcript_id "g33.t1"; gene_id "g33"; scaffold_2_15685830-15687944 AUGUSTUS CDS 601 690 0.99 + 0 transcript_id "g33.t1"; gene_id "g33"; scaffold_2_15685830-15687944 AUGUSTUS CDS 779 853 0.56 + 0 transcript_id "g33.t1"; gene_id "g33"; scaffold_2_15685830-15687944 AUGUSTUS CDS 1300 1515 1 + 0 transcript_id "g33.t1"; gene_id "g33"; scaffold_2_15685830-15687944 AUGUSTUS stop_codon 1513 1515 . + 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MHSRLQELKKEEETLLKIKVMLQDQLNRLKFEEGALKSIINSQLEEGLSEPATPEVPVNPDDANKINQTKLLLTGPVD # YNMEEEEEEEEEEEEEEEEEEDDEDDNELEVVPEEDEEEEEEEEEDYY] # end gene g33 ### # # ----- sequence number 33 (length = 5335, name = scaffold_2_16065403-16070737) ----- # # annotation: # Sequence scaffold_2_16065403-16070737 length=5335 scaffold_2_16065403-16070737 database start_codon 601 603 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 826 1602 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 1942 2639 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 2799 3606 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 3706 3819 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 3943 4052 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 4107 4265 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database intron 4466 4662 . + . transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 601 825 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 1603 1941 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 2640 2798 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 3607 3705 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 3820 3942 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 4053 4106 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 4266 4465 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database CDS 4663 4735 . + 1 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; scaffold_2_16065403-16070737 database stop_codon 4733 4735 . + 0 transcript_id "g_1357-T1.1"; gene_id "g_1357-T1"; # Predicted genes for sequence number 33 on both strands # start gene g34 scaffold_2_16065403-16070737 AUGUSTUS gene 601 4900 0.16 + . g34 scaffold_2_16065403-16070737 AUGUSTUS transcript 601 4900 0.16 + . g34.t1 scaffold_2_16065403-16070737 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 826 1602 0.76 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 1942 2639 0.99 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 2799 3606 0.79 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 3706 3819 0.53 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 3943 4052 0.64 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 4107 4265 0.79 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS intron 4466 4770 0.62 + . transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 601 825 0.76 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 1603 1941 0.75 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 2640 2798 1 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 3607 3705 0.77 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 3820 3942 0.64 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 4053 4106 1 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 4266 4465 0.72 + 0 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS CDS 4771 4900 0.62 + 1 transcript_id "g34.t1"; gene_id "g34"; scaffold_2_16065403-16070737 AUGUSTUS stop_codon 4898 4900 . + 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MNIFMSHLAAEMGQDQTKQQIEKGLKLYQSNHTDKALHVWTKVLEKTSDPGGKFRVLGCLITAHSEMGKYKEMLKYAL # AQIDTAREMEDPDFLTEGYLNLARSNEKLCDFQKTVSYCKTCLNMQGTTVSLQLNGQVCLSMGNAFLGLSVFQKALESYEKALRYAHNNDDKMLECRV # CCSLGNFYVQLKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQYHMSVAYRKLDRLPDAMECCEESMKIALQHGDRPLQALCLLNFADIHRCRNDVD # KALPRYESSMCIMTEIGNRLGQAQVYLGVAKCWLQQKELDRALESLQRTQELAEALGNKLCSLKVHCLSEGVFRSKEQQDELREQVVKFLQCVEELEL # YCGMCGESIGEKDQQLQALPCSHIFHLKTLNAATPLTPTVSKKSRQPLELQNASSDSTRMGTLVLWRLPP] # end gene g34 ### # # ----- sequence number 34 (length = 3077, name = scaffold_3_4903560-4906636) ----- # # annotation: # Sequence scaffold_3_4903560-4906636 length=3077 scaffold_3_4903560-4906636 database start_codon 601 603 . + 0 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database intron 653 948 . + . transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database intron 1121 1562 . + . transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database intron 1835 1976 . + . transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database intron 2117 2318 . + . transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database CDS 601 652 . + 0 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database CDS 949 1120 . + 2 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database CDS 1563 1834 . + 1 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database CDS 1977 2116 . + 2 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database CDS 2319 2477 . + 0 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; scaffold_3_4903560-4906636 database stop_codon 2475 2477 . + 0 transcript_id "g_1985-T1.1"; gene_id "g_1985-T1"; # Predicted genes for sequence number 34 on both strands # start gene g35 scaffold_3_4903560-4906636 AUGUSTUS gene 601 2477 0.6 + . g35 scaffold_3_4903560-4906636 AUGUSTUS transcript 601 2477 0.6 + . g35.t1 scaffold_3_4903560-4906636 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS intron 653 948 1 + . transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS intron 1121 1562 1 + . transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS intron 1726 2318 0.66 + . transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS CDS 601 652 0.93 + 0 transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS CDS 949 1120 1 + 2 transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS CDS 1563 1725 0.66 + 1 transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS CDS 2319 2477 1 + 0 transcript_id "g35.t1"; gene_id "g35"; scaffold_3_4903560-4906636 AUGUSTUS stop_codon 2475 2477 . + 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MTMWLLLAVSLLLRDATGFVSPRVRSSIVGGEDAPEGRWPWMVYLSITNGYDSWSCGGSVLNKEWVLTAAHCVEPALK # PLPEFSFARLGTHALEDESTFYRGISLFSSHPGYEENDEENDIALVKLAVKGDSGGPLVCRSGERFVQVGVVSFGNGCARKGYPGVYTRVAKYLDFIN # ETIHA] # end gene g35 ### # # ----- sequence number 35 (length = 4144, name = scaffold_3_7912310-7916453) ----- # # annotation: # Sequence scaffold_3_7912310-7916453 length=4144 scaffold_3_7912310-7916453 database start_codon 601 603 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 775 983 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 1320 1423 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 1520 1615 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 1710 1813 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 1983 2073 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 2174 2283 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 2530 2697 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 2873 3052 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database intron 3232 3376 . + . transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 601 774 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 984 1319 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 1424 1519 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 1616 1709 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 1814 1982 . + 2 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 2074 2173 . + 1 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 2284 2529 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 2698 2872 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 3053 3231 . + 2 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database CDS 3377 3544 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; scaffold_3_7912310-7916453 database stop_codon 3542 3544 . + 0 transcript_id "g_2048-T1.1"; gene_id "g_2048-T1"; # Predicted genes for sequence number 35 on both strands # start gene g36 scaffold_3_7912310-7916453 AUGUSTUS gene 601 3544 0.66 + . g36 scaffold_3_7912310-7916453 AUGUSTUS transcript 601 3544 0.66 + . g36.t1 scaffold_3_7912310-7916453 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 775 983 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 1320 1423 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 1520 1615 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 1710 1813 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 1983 2073 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 2174 2283 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 2530 2697 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 2873 3052 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS intron 3232 3376 1 + . transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 601 774 0.66 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 984 1319 1 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 1424 1519 1 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 1616 1709 1 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 1814 1982 1 + 2 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 2074 2173 1 + 1 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 2284 2529 1 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 2698 2872 1 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 3053 3231 1 + 2 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS CDS 3377 3544 1 + 0 transcript_id "g36.t1"; gene_id "g36"; scaffold_3_7912310-7916453 AUGUSTUS stop_codon 3542 3544 . + 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MLRLPTVLRQMRPVSRALAPHLTRSYAKDVKFGADARALMLQGVDLLTDAVAVTMGPKGRTVIIEQSWGSPKVTKDGV # TVAKSIELKNKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFDTISKGANPVEIRRGVMLAVETVINELKRLSKPVTTPEEIAQVATISA # NGDVEIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQDAYLLLSEKKISSVQSIVPALEIANQHRKPLVIV # AEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLHDMAIATGGTVFGDEAVGVALEDIQAHDFGKVGEVLVTKDDTMLLKGRGDVGAIEKRAQ # EIAEQLDNTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRCIPALDSVKPANDDQKIGLEIIRR # ALRIPAMTIAKNAGVEGSLVVEKILQGGPELGYDALIGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTELPKEEKEMPGGGMGGMGGMG # GMGGMGGGMF] # end gene g36 ### # # ----- sequence number 36 (length = 2566, name = scaffold_3_9846729-9849294) ----- # # annotation: # Sequence scaffold_3_9846729-9849294 length=2566 scaffold_3_9846729-9849294 database start_codon 601 603 . + 0 transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database intron 728 936 . + . transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database intron 1128 1254 . + . transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database intron 1488 1599 . + . transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database CDS 601 727 . + 0 transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database CDS 937 1127 . + 2 transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database CDS 1255 1487 . + 0 transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database CDS 1600 1966 . + 1 transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; scaffold_3_9846729-9849294 database stop_codon 1964 1966 . + 0 transcript_id "g_1999-T1.1"; gene_id "g_1999-T1"; # Predicted genes for sequence number 36 on both strands # start gene g37 scaffold_3_9846729-9849294 AUGUSTUS gene 601 1966 0.14 + . g37 scaffold_3_9846729-9849294 AUGUSTUS transcript 601 1966 0.14 + . g37.t1 scaffold_3_9846729-9849294 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g37.t1"; gene_id "g37"; scaffold_3_9846729-9849294 AUGUSTUS intron 728 1357 0.41 + . transcript_id "g37.t1"; gene_id "g37"; scaffold_3_9846729-9849294 AUGUSTUS intron 1488 1599 1 + . transcript_id "g37.t1"; gene_id "g37"; scaffold_3_9846729-9849294 AUGUSTUS CDS 601 727 0.4 + 0 transcript_id "g37.t1"; gene_id "g37"; scaffold_3_9846729-9849294 AUGUSTUS CDS 1358 1487 0.41 + 2 transcript_id "g37.t1"; gene_id "g37"; scaffold_3_9846729-9849294 AUGUSTUS CDS 1600 1966 1 + 1 transcript_id "g37.t1"; gene_id "g37"; scaffold_3_9846729-9849294 AUGUSTUS stop_codon 1964 1966 . + 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MQGLTDIEYNGCKKMLGLLSKGDIFSLNDTVTNKMIAVESVSVYARQFCQWFYQLLNSQNSSLGQPPQDWGPQHFWED # ARLRLFTCIDEQQTEEFHGSELASLRLLALTRDERLLLSPNLEPHGLRALSSPHGLVLVAVAGTIHRDKACLGIFEQVFGLIRSPLDNDQWKIKFANL # KIRKQDSLSGAEELTSPSVTCDPSELQLLCS] # end gene g37 ### # # ----- sequence number 37 (length = 3029, name = scaffold_3_10352935-10355963) ----- # # annotation: # Sequence scaffold_3_10352935-10355963 length=3029 scaffold_3_10352935-10355963 database start_codon 601 603 . + 0 transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; scaffold_3_10352935-10355963 database intron 723 1148 . + . transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; scaffold_3_10352935-10355963 database intron 1201 2168 . + . transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; scaffold_3_10352935-10355963 database CDS 601 722 . + 0 transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; scaffold_3_10352935-10355963 database CDS 1149 1200 . + 1 transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; scaffold_3_10352935-10355963 database CDS 2169 2429 . + 0 transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; scaffold_3_10352935-10355963 database stop_codon 2427 2429 . + 0 transcript_id "g_2001-T1.1"; gene_id "g_2001-T1"; # Predicted genes for sequence number 37 on both strands # start gene g38 scaffold_3_10352935-10355963 AUGUSTUS gene 1 2429 0.53 + . g38 scaffold_3_10352935-10355963 AUGUSTUS transcript 1 2429 0.53 + . g38.t1 scaffold_3_10352935-10355963 AUGUSTUS intron 1 1148 0.53 + . transcript_id "g38.t1"; gene_id "g38"; scaffold_3_10352935-10355963 AUGUSTUS intron 1201 2168 1 + . transcript_id "g38.t1"; gene_id "g38"; scaffold_3_10352935-10355963 AUGUSTUS CDS 1149 1200 0.77 + 1 transcript_id "g38.t1"; gene_id "g38"; scaffold_3_10352935-10355963 AUGUSTUS CDS 2169 2429 1 + 0 transcript_id "g38.t1"; gene_id "g38"; scaffold_3_10352935-10355963 AUGUSTUS stop_codon 2427 2429 . + 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [SSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIERNSQLEQENTLLKTLASPEQMAQFQAQVQTGSPP # APTQAPVSQPSGPAQPASHNSGPSA] # end gene g38 ### # # ----- sequence number 38 (length = 2086, name = scaffold_3_11299367-11301452) ----- # # annotation: # Sequence scaffold_3_11299367-11301452 length=2086 scaffold_3_11299367-11301452 database start_codon 601 603 . + 0 transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; scaffold_3_11299367-11301452 database intron 686 996 . + . transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; scaffold_3_11299367-11301452 database intron 1103 1245 . + . transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; scaffold_3_11299367-11301452 database CDS 601 685 . + 0 transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; scaffold_3_11299367-11301452 database CDS 997 1102 . + 2 transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; scaffold_3_11299367-11301452 database CDS 1246 1486 . + 1 transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; scaffold_3_11299367-11301452 database stop_codon 1484 1486 . + 0 transcript_id "g_2007-T1.1"; gene_id "g_2007-T1"; # Predicted genes for sequence number 38 on both strands # start gene g39 scaffold_3_11299367-11301452 AUGUSTUS gene 1 1486 0.99 + . g39 scaffold_3_11299367-11301452 AUGUSTUS transcript 1 1486 0.99 + . g39.t1 scaffold_3_11299367-11301452 AUGUSTUS intron 1 568 0.99 + . transcript_id "g39.t1"; gene_id "g39"; scaffold_3_11299367-11301452 AUGUSTUS intron 686 996 1 + . transcript_id "g39.t1"; gene_id "g39"; scaffold_3_11299367-11301452 AUGUSTUS intron 1103 1245 1 + . transcript_id "g39.t1"; gene_id "g39"; scaffold_3_11299367-11301452 AUGUSTUS CDS 569 685 0.99 + 2 transcript_id "g39.t1"; gene_id "g39"; scaffold_3_11299367-11301452 AUGUSTUS CDS 997 1102 1 + 2 transcript_id "g39.t1"; gene_id "g39"; scaffold_3_11299367-11301452 AUGUSTUS CDS 1246 1486 1 + 1 transcript_id "g39.t1"; gene_id "g39"; scaffold_3_11299367-11301452 AUGUSTUS stop_codon 1484 1486 . + 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [GFQRHLLDPLMRFHYTLKNLRLQEVEYVLMKAIALFSPDRVGVTNRAVIDSLQERLAFTLKTHIDSKRKGPDKHLLYP # KVMACLTEMRTMNEEYTKQVLQIQDIQPDVSPLILEVVSKDPLGPPSQTGIITDTLPSPQEPDASHTASSSCHSH] # end gene g39 ### # # ----- sequence number 39 (length = 2198, name = scaffold_3_12773936-12776133) ----- # # annotation: # Sequence scaffold_3_12773936-12776133 length=2198 scaffold_3_12773936-12776133 database start_codon 601 603 . + 0 transcript_id "g_2013-T1.1"; gene_id "g_2013-T1"; scaffold_3_12773936-12776133 database intron 1107 1405 . + . transcript_id "g_2013-T1.1"; gene_id "g_2013-T1"; scaffold_3_12773936-12776133 database CDS 601 1106 . + 0 transcript_id "g_2013-T1.1"; gene_id "g_2013-T1"; scaffold_3_12773936-12776133 database CDS 1406 1598 . + 1 transcript_id "g_2013-T1.1"; gene_id "g_2013-T1"; scaffold_3_12773936-12776133 database stop_codon 1596 1598 . + 0 transcript_id "g_2013-T1.1"; gene_id "g_2013-T1"; # Predicted genes for sequence number 39 on both strands # start gene g40 scaffold_3_12773936-12776133 AUGUSTUS gene 1 2198 0.28 + . g40 scaffold_3_12773936-12776133 AUGUSTUS transcript 1 2198 0.28 + . g40.t1 scaffold_3_12773936-12776133 AUGUSTUS intron 1 412 0.61 + . transcript_id "g40.t1"; gene_id "g40"; scaffold_3_12773936-12776133 AUGUSTUS intron 492 598 0.69 + . transcript_id "g40.t1"; gene_id "g40"; scaffold_3_12773936-12776133 AUGUSTUS intron 1107 2198 0.51 + . transcript_id "g40.t1"; gene_id "g40"; scaffold_3_12773936-12776133 AUGUSTUS CDS 413 491 0.61 + 0 transcript_id "g40.t1"; gene_id "g40"; scaffold_3_12773936-12776133 AUGUSTUS CDS 599 1106 0.54 + 2 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [SPVEDYRLQTDGPGVCVIIDCVGSDGGMLEEYFTLLHFKVFLHKWLNIEEMLSVFRGMSKQREIQEAGTLVVCIISRG # TATDLLATDSYSVGVRLDSVRNFFTSDTCPRLTGKPKLFFIQSYHVPETQRCSRAAHRDEDLETDGLSSLRLGVETVPVGADVFWSNCWTEERQLEET # AHHSVYLQALSQSLAKSPK] # end gene g40 ### # # ----- sequence number 40 (length = 6530, name = scaffold_3_16423935-16430464) ----- # # annotation: # Sequence scaffold_3_16423935-16430464 length=6530 scaffold_3_16423935-16430464 database start_codon 601 603 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 683 1267 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 1371 1463 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 1493 1861 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 1981 2068 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 2271 2392 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 2526 2659 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 2715 2830 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 2996 3578 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 3707 3945 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 4049 4406 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 4539 5367 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database intron 5577 5791 . + . transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 601 682 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 1268 1370 . + 2 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 1464 1492 . + 1 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 1862 1980 . + 2 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 2069 2270 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 2393 2525 . + 2 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 2660 2714 . + 1 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 2831 2995 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 3579 3706 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 3946 4048 . + 1 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 4407 4538 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 5368 5576 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database CDS 5792 5930 . + 1 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; scaffold_3_16423935-16430464 database stop_codon 5928 5930 . + 0 transcript_id "g_2028-T1.1"; gene_id "g_2028-T1"; # Predicted genes for sequence number 40 on both strands # start gene g41 scaffold_3_16423935-16430464 AUGUSTUS gene 601 5930 0.28 + . g41 scaffold_3_16423935-16430464 AUGUSTUS transcript 601 5930 0.28 + . g41.t1 scaffold_3_16423935-16430464 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 683 1267 0.98 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 1371 1463 0.62 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 1493 1861 0.61 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 1981 2068 1 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 2271 2392 1 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 2526 2659 1 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 2751 2830 0.94 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 2996 3578 0.48 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 3707 3945 0.97 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 4049 4406 1 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 4539 5367 1 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS intron 5577 5791 1 + . transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 601 682 0.99 + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 1268 1370 0.98 + 2 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 1464 1492 0.63 + 1 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 1862 1980 0.75 + 2 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 2069 2270 1 + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 2393 2525 1 + 2 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 2660 2750 0.94 + 1 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 2831 2995 1 + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 3579 3706 1 + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 3946 4048 0.97 + 1 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 4407 4538 1 + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 5368 5576 1 + 0 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS CDS 5792 5930 1 + 1 transcript_id "g41.t1"; gene_id "g41"; scaffold_3_16423935-16430464 AUGUSTUS stop_codon 5928 5930 . + 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MRWFEGSIPAAIAAAKQQNFVFVVVITGDDEQSTQMVSSWEDDIVADASLNTCVAIKVDAKSETCVQFSQIYPVVCIP # SSFFIGENGIPLEVIAGSVPAEELRKRIDKVKEMHAQQIRAGAEAVAPQAEMGLPMEAPLPEEQAPAPVTALPLSPPAPQDLQPTRTPATESTATPST # SKESLSRPADGGGASGHVTPGEDRSTSSDDASASSQPDEGLDAKVERLTKRLEERREQKKKVEEEVTPDVAEVVRQEGEIKKEMERRKQGKEILDFKK # KQEEDKTKRLLDERNKEKAEEKAARERVKQQIALDRADRAARYAQNQEELETARLAALQARQAEQEARRETLNRERSTIARIQFRLPDGSSFTNQFPS # ESRLQEARQFAAQEVGNRYGNFSLATMFPRREFTGEDLGKTLLELELAPSASVVLLPQTGRPAHSVVQSSEGGLWALLGSILYPLLAVWRFLTSFLVT # SQSPAPSSNPSQRPGTAPASGTAGGEPKRESLRKRTMEKRPEDFKKDGKIHRLRTQEDSEDDNNTWNGNSTQQM] # end gene g41 ### # # ----- sequence number 41 (length = 2620, name = scaffold_3_17143714-17146333) ----- # # annotation: # Sequence scaffold_3_17143714-17146333 length=2620 scaffold_3_17143714-17146333 database start_codon 601 603 . + 0 transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database intron 717 880 . + . transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database intron 946 1499 . + . transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database intron 1586 1978 . + . transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database CDS 601 716 . + 0 transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database CDS 881 945 . + 1 transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database CDS 1500 1585 . + 2 transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database CDS 1979 2020 . + 0 transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; scaffold_3_17143714-17146333 database stop_codon 2018 2020 . + 0 transcript_id "g_2034-T1.1"; gene_id "g_2034-T1"; # Predicted genes for sequence number 41 on both strands # start gene g42 scaffold_3_17143714-17146333 AUGUSTUS gene 1 2020 0.95 + . g42 scaffold_3_17143714-17146333 AUGUSTUS transcript 1 2020 0.95 + . g42.t1 scaffold_3_17143714-17146333 AUGUSTUS intron 1 547 1 + . transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS intron 717 880 1 + . transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS intron 946 1499 1 + . transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS intron 1586 1978 0.95 + . transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS CDS 548 716 1 + 2 transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS CDS 881 945 1 + 1 transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS CDS 1500 1585 1 + 2 transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS CDS 1979 2020 0.95 + 0 transcript_id "g42.t1"; gene_id "g42"; scaffold_3_17143714-17146333 AUGUSTUS stop_codon 2018 2020 . + 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [ETRFQDTITRLEGEIAKMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTTTSMTAPSGYASIRGDYRE # TSPEQQRSGETFSKKTVLIKTIETRDGEVVSESTQHQQDIM] # end gene g42 ### # # ----- sequence number 42 (length = 6848, name = scaffold_3_17525908-17532755) ----- # # annotation: # Sequence scaffold_3_17525908-17532755 length=6848 scaffold_3_17525908-17532755 database start_codon 601 603 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database intron 640 3462 . + . transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database intron 3733 4062 . + . transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database intron 4159 4330 . + . transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database intron 4514 5000 . + . transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database CDS 601 639 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database CDS 3463 3732 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database CDS 4063 4158 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database CDS 4331 4513 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database CDS 5001 6248 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; scaffold_3_17525908-17532755 database stop_codon 6246 6248 . + 0 transcript_id "g_2037-T1.1"; gene_id "g_2037-T1"; # Predicted genes for sequence number 42 on both strands # start gene g43 scaffold_3_17525908-17532755 AUGUSTUS gene 2994 6248 0.15 + . g43 scaffold_3_17525908-17532755 AUGUSTUS transcript 2994 6248 0.15 + . g43.t1 scaffold_3_17525908-17532755 AUGUSTUS start_codon 2994 2996 . + 0 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS intron 3013 3153 0.49 + . transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS intron 3399 3462 0.38 + . transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS intron 3733 4062 0.99 + . transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS intron 4159 4330 0.99 + . transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS intron 4514 5000 0.77 + . transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS CDS 2994 3012 0.44 + 0 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS CDS 3154 3398 0.38 + 2 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS CDS 3463 3732 1 + 0 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS CDS 4063 4158 0.99 + 0 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS CDS 4331 4513 1 + 0 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS CDS 5001 6248 0.87 + 0 transcript_id "g43.t1"; gene_id "g43"; scaffold_3_17525908-17532755 AUGUSTUS stop_codon 6246 6248 . + 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MMGGNSESNLCLALKRDKAHGADVLGSGGDEAKKQRSAFIIHASSSSFSFPVCVVIKGGRGTAAESLFSVAWRPVLGA # RRHGGSLTAPDMDLIDILWRQDIDLGARREVFDYSHRQKESERRRQREAAEEKRQELARQQEEALLAQLQLDEETGEFVPRSPPALGPSPSAGAPSEI # TQNGGYTEDGGDAMSFDECMQLLAETFPLVEDSEPTPPGLDATLAPAPSGSLITMAPEQPRVARLPSHPDPLPPQRTSPDLEQAWMELLSLPELQQCL # NMQMEDTLLDTSVYLPTSSPELHNPAYSFYPLPHHTSDSPSAPDLCPRDFVHSFEGVFQTGSPPDHLGQMTLEAPEVNTTFSADSFCDVFYPDLTTGE # MSSDAQVHSQTDGDGTLADPAHTLPFKPMDTQSLSPGEMFDGGELEAMTECPDSDSGVSFNTSPNASSPEKSMYGDGSYAFSDSDMEEMDSNPGSAES # DYSEMFSLNYQPDGYKPPPSASDSAAHKRGRKNRQDKTEPNEKTGHSSHPFTKDKPKKRSEKRLSRDEQKAKALQIPFTVETVINLPVDDFNEMMSKH # QLNEAQLALVRDIRRRGKNKVAAQNCRKRKMENIVGLEYDLDSLKEEKERQLEEKRRNAGSLREAKRQLSTLYLEVFSLLRDEEGRSYSPAEYSLQQT # TDGSVFLVPRVKKTLKSNPN] # end gene g43 ### # # ----- sequence number 43 (length = 2267, name = scaffold_3_17909066-17911332) ----- # # annotation: # Sequence scaffold_3_17909066-17911332 length=2267 scaffold_3_17909066-17911332 database start_codon 601 603 . + 0 transcript_id "g_2039-T1.1"; gene_id "g_2039-T1"; scaffold_3_17909066-17911332 database intron 788 1380 . + . transcript_id "g_2039-T1.1"; gene_id "g_2039-T1"; scaffold_3_17909066-17911332 database CDS 601 787 . + 0 transcript_id "g_2039-T1.1"; gene_id "g_2039-T1"; scaffold_3_17909066-17911332 database CDS 1381 1667 . + 2 transcript_id "g_2039-T1.1"; gene_id "g_2039-T1"; scaffold_3_17909066-17911332 database stop_codon 1665 1667 . + 0 transcript_id "g_2039-T1.1"; gene_id "g_2039-T1"; # Predicted genes for sequence number 43 on both strands # start gene g44 scaffold_3_17909066-17911332 AUGUSTUS gene 1 1667 1 + . g44 scaffold_3_17909066-17911332 AUGUSTUS transcript 1 1667 1 + . g44.t1 scaffold_3_17909066-17911332 AUGUSTUS intron 194 289 1 + . transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS intron 477 590 1 + . transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS intron 788 1380 1 + . transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS CDS 1 193 1 + 0 transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS CDS 290 476 1 + 2 transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS CDS 591 787 1 + 1 transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS CDS 1381 1667 1 + 2 transcript_id "g44.t1"; gene_id "g44"; scaffold_3_17909066-17911332 AUGUSTUS stop_codon 1665 1667 . + 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [QNLQLPTTPPQQITLAPVQTLSLGQGGALGAGQVSISAGQIPNLQTVTVNSMAQLQEGDVDSPGDIQIKEEPDAEDWQ # LSSDSTLNPSDLSHLRVRLVEEDEQLGQEGKRLRRVACTCPNCKESGGRGSNMGKKKQHICHIQGCGKVYGKTSHLRAHLRWHSGERPFVCSWMFCGK # RFTRSDELQRHRRTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKGVNTSSAVVASVESAGSSDSIITSGGTTLILTNIQQGSNSAQDILSKAEIP # LQLVTVAARDALD] # end gene g44 ### # # ----- sequence number 44 (length = 8071, name = scaffold_3_18758560-18766630) ----- # # annotation: # Sequence scaffold_3_18758560-18766630 length=8071 scaffold_3_18758560-18766630 database start_codon 601 603 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 694 831 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 907 995 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 1134 3230 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 3342 3480 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 3577 3920 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 3984 5491 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 5609 5814 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 5885 6314 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 6403 7089 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database intron 7184 7324 . + . transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 601 693 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 832 906 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 996 1133 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 3231 3341 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 3481 3576 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 3921 3983 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 5492 5608 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 5815 5884 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 6315 6402 . + 2 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 7090 7183 . + 1 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database CDS 7325 7471 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; scaffold_3_18758560-18766630 database stop_codon 7469 7471 . + 0 transcript_id "g_2042-T1.1"; gene_id "g_2042-T1"; # Predicted genes for sequence number 44 on both strands # start gene g45 scaffold_3_18758560-18766630 AUGUSTUS gene 1 1517 0.15 + . g45 scaffold_3_18758560-18766630 AUGUSTUS transcript 1 1517 0.15 + . g45.t1 scaffold_3_18758560-18766630 AUGUSTUS intron 1 571 0.65 + . transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS intron 694 831 0.99 + . transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS intron 907 995 1 + . transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS intron 1134 1258 0.31 + . transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS intron 1299 1374 0.32 + . transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS CDS 572 693 0.74 + 2 transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS CDS 832 906 0.99 + 0 transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS CDS 996 1133 0.96 + 0 transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS CDS 1259 1298 0.33 + 0 transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS CDS 1375 1517 0.32 + 2 transcript_id "g45.t1"; gene_id "g45"; scaffold_3_18758560-18766630 AUGUSTUS stop_codon 1515 1517 . + 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [RTIEDHESVMEVLSSWALDTDSRLYFRKNYAKYEFFKKPLDFFPDHMVSISSETNGLLKHCELVQTFLNLSACPEIHG # HLHAKEQGRKSWKKFYFVLRRSGLYFSNKGTSKSAGGDLDWISLLPGWPRYRSDQAGTLLYLATGPPQPPPSAPHRPPTGPSWLPHSLYLQLH] # end gene g45 ### # start gene g46 scaffold_3_18758560-18766630 AUGUSTUS gene 2364 7471 0.38 + . g46 scaffold_3_18758560-18766630 AUGUSTUS transcript 2364 7471 0.38 + . g46.t1 scaffold_3_18758560-18766630 AUGUSTUS start_codon 2364 2366 . + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 2576 2783 0.72 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 3124 3230 1 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 3342 3480 1 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 3577 3920 0.99 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 3984 4264 0.99 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 4397 5491 0.83 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 5609 5814 1 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 5885 6314 1 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 6403 7089 0.98 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS intron 7184 7324 1 + . transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 2364 2575 0.57 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 2784 3123 0.78 + 1 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 3231 3341 1 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 3481 3576 1 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 3921 3983 0.99 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 4265 4396 0.93 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 5492 5608 0.96 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 5815 5884 1 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 6315 6402 1 + 2 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 7090 7183 0.98 + 1 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS CDS 7325 7471 1 + 0 transcript_id "g46.t1"; gene_id "g46"; scaffold_3_18758560-18766630 AUGUSTUS stop_codon 7469 7471 . + 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MLVDREGSVLVDREGSVLVDREGSVLVDREDSMLVDREDSVLVDREDRYGWWTDEDSMLVIERTAGGQRGQEDSVLVD # REDSVLVDREGSVLVDREDSMLVDREDSMLVDREDSMLVDREDSVLVDREDSVLVDREGSVLMDREDSVLVDREDSVLVDREDNVLGETGCGLKNMWG # CCVHARRSEPRHLQFIAEFSDSDVYTLLSARKTHGAPTDYGFCVKSSKGVSSRDLKLLCADDEQTRTCWITAMRLFKYGMQLYQNFIQPHQKQKASPM # RNAVTLQADRAPGSAWGPLARPGGPGSSWGGLGGQVGPVGGGWMRSISENSLVAMDFSGQKSRVIENPSEALSVAVEEGLTWRRKSCHRLSSQGSPST # SQNPISTIALHMAQPWFHSKLSRDEAHRLITQQGLIDGVFLLRDSQSNPKMFVLSLCHTQRIKHFQILPVDEDGELFYSLDDGHTRFTDLIQLVEFYQ # LNRGVLPCKLKHHCARITL] # end gene g46 ### # # ----- sequence number 45 (length = 8325, name = scaffold_3_19811065-19819389) ----- # # annotation: # Sequence scaffold_3_19811065-19819389 length=8325 scaffold_3_19811065-19819389 database start_codon 601 603 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 697 1439 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 1591 1920 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 2055 2336 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 2452 3184 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 3298 3824 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 3942 4837 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 4976 6131 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 6228 6314 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 6402 6727 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 6825 7038 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 7101 7404 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database intron 7549 7635 . + . transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 601 696 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 1440 1590 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 1921 2054 . + 2 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 2337 2451 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 3185 3297 . + 2 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 3825 3941 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 4838 4975 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 6132 6227 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 6315 6401 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 6728 6824 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 7039 7100 . + 2 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 7405 7548 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database CDS 7636 7725 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; scaffold_3_19811065-19819389 database stop_codon 7723 7725 . + 0 transcript_id "g_2045-T1.1"; gene_id "g_2045-T1"; # Predicted genes for sequence number 45 on both strands # start gene g47 scaffold_3_19811065-19819389 AUGUSTUS gene 1 7725 0.37 + . g47 scaffold_3_19811065-19819389 AUGUSTUS transcript 1 7725 0.37 + . g47.t1 scaffold_3_19811065-19819389 AUGUSTUS intron 1 587 0.49 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 697 1439 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 1591 1920 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 2055 2336 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 2452 3205 0.98 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 3298 3824 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 3942 4837 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 4976 6131 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 6228 6314 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 6402 6727 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 6825 7038 0.87 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 7101 7404 1 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS intron 7549 7635 0.92 + . transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 588 696 0.92 + 1 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 1440 1590 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 1921 2054 1 + 2 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 2337 2451 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 3206 3297 0.98 + 2 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 3825 3941 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 4838 4975 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 6132 6227 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 6315 6401 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 6728 6824 1 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 7039 7100 0.87 + 2 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 7405 7548 0.92 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS CDS 7636 7725 0.92 + 0 transcript_id "g47.t1"; gene_id "g47"; scaffold_3_19811065-19819389 AUGUSTUS stop_codon 7723 7725 . + 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [KAEQMFGDQEVWSCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPT # FAEDEELQNMDKEDALICFEEHIRALEKEEEDDKQKCLLRERRRQRKNRESFQKFLDELHDHGQLHSMSAWMEMYPTISSDIRFSNMLGQPGSTPLDL # FKFYVEDLKARYHDEKRIIKDILKDKGFLVEVNTGFEDFGSIISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKEAAFKSMLKQAT # PPLEPEATWETVRERFLKESAFEDVTLESERKRIFKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEEEDYHNNKKKKRSQSKSPSER # SSSGESERSYKKSKKHKKKGKKRRHKSASPESEGEKKGRDRDSKRELEKENDKARVKSRSDSKQKSPKRKATKEEGGWDTSGSELSEGELEKRRRTLL # EQLDAP] # end gene g47 ### # # ----- sequence number 46 (length = 6300, name = scaffold_4_1974014-1980313) ----- # # annotation: # Sequence scaffold_4_1974014-1980313 length=6300 scaffold_4_1974014-1980313 database start_codon 601 603 . + 0 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 2304 2557 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 2642 2910 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 2995 3337 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 3422 3639 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 3724 3804 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 3889 4068 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 4153 4287 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database intron 4372 5627 . + . transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 601 2303 . + 0 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 2558 2641 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 2911 2994 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 3338 3421 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 3640 3723 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 3805 3888 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 4069 4152 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 4288 4371 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database CDS 5628 5700 . + 1 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; scaffold_4_1974014-1980313 database stop_codon 5698 5700 . + 0 transcript_id "g_2054-T1.1"; gene_id "g_2054-T1"; # Predicted genes for sequence number 46 on both strands # start gene g48 scaffold_4_1974014-1980313 AUGUSTUS gene 1 5700 0.67 + . g48 scaffold_4_1974014-1980313 AUGUSTUS transcript 1 5700 0.67 + . g48.t1 scaffold_4_1974014-1980313 AUGUSTUS intron 66 204 0.72 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 380 487 0.94 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 2304 2557 1 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 2642 2910 1 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 2995 3337 0.98 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 3422 3639 1 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 3724 3804 1 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 3889 4068 1 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 4153 4287 1 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS intron 4372 5627 0.96 + . transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 1 65 1 + 2 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 205 379 0.7 + 0 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 488 2303 1 + 2 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 2558 2641 1 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 2911 2994 0.99 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 3338 3421 0.99 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 3640 3723 1 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 3805 3888 1 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 4069 4152 1 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 4288 4371 1 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS CDS 5628 5700 0.99 + 1 transcript_id "g48.t1"; gene_id "g48"; scaffold_4_1974014-1980313 AUGUSTUS stop_codon 5698 5700 . + 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [SGFFCQEDVEMVQPAVTKADQVRKILELVQSKGEPACEYFLYILYKVYDAYIDLQPWLKEINYKPPDFIQEIPVVNTD # PISRYCEKLRHELRRDTRFIASYSQREETLLDELYTDTQMELLDGHNDSLGYLESLDQLLGEQGVYNPEAETVFVTGGAGVGKSLLLQKVQNLWSKRE # LQTDAMFFFKFRCRMFSTFKKTDEISLQDLLFKHNCYPDQDLDNEVYRYILRFPEKVLFTFDGYDEVQGELDLVNVPEVVSPEEKTHPLLLLINLLCG # KLLKGSRKVLTARTGTEVLAKVIRKRVALRGFSPAHLKTYTSLHFKEQEHRDLVTVQLDASPHLCGLCSTPLFCWIVFKSFKHLHTMYDDFELPDTSV # TLTNIFLLLSEVFLSRSVQSPAGMLKRSTRCTAETFRAGMRPLAAFAKLALLGLEGGGFLFSLEEAASCGLLEADLQVGFLRPVSCYDGTCSSDAFEF # LHLTLQSFLAAFALVLEEQAGVSSTLRFFTECSRKKDTSCLRWASCVRRSSKLRGTEPFQTNDQLQFANLFLCGLLSKTNTGLMEHLVSPALLDRKRS # VLKSYLSTSVRCQLRGLPVHGTDSEGSKVHVMPNFLWTLRCIFETGSREVAQLTAKGITASYIKLGYCNVCSGDCSALNYVLQHRKKRLGVDMDNNNI # SDYGVKQLQSSLSTMTVVRLCVNNISDSSVEILAEELTKRKVVEVLGLYKNHITDVGAKLVAQIIEDCPKLRIVKIGSNKITSVGGTYLAQAIQKSSC # IFDVGMWGNTIGDEGAEAFAEALRHHPSLTNLSLSANGITSKGGRSLAQALKENTVLRIFWLVQNQITDDVAPDMAELIRANTGLSHLWLIDNQLTVT # GMKILSDALSHNTTLKEICVKGNRVSKEEETLFKEQPRLRFH] # end gene g48 ### # # ----- sequence number 47 (length = 3840, name = scaffold_4_3319389-3323228) ----- # # annotation: # Sequence scaffold_4_3319389-3323228 length=3840 scaffold_4_3319389-3323228 database start_codon 601 603 . + 0 transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; scaffold_4_3319389-3323228 database intron 614 784 . + . transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; scaffold_4_3319389-3323228 database intron 916 1347 . + . transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; scaffold_4_3319389-3323228 database CDS 601 613 . + 0 transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; scaffold_4_3319389-3323228 database CDS 785 915 . + 2 transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; scaffold_4_3319389-3323228 database CDS 1348 3240 . + 0 transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; scaffold_4_3319389-3323228 database stop_codon 3238 3240 . + 0 transcript_id "g_2058-T1.1"; gene_id "g_2058-T1"; # Predicted genes for sequence number 47 on both strands # start gene g49 scaffold_4_3319389-3323228 AUGUSTUS gene 1 3240 0.51 + . g49 scaffold_4_3319389-3323228 AUGUSTUS transcript 1 3240 0.51 + . g49.t1 scaffold_4_3319389-3323228 AUGUSTUS intron 614 784 1 + . transcript_id "g49.t1"; gene_id "g49"; scaffold_4_3319389-3323228 AUGUSTUS intron 916 1347 1 + . transcript_id "g49.t1"; gene_id "g49"; scaffold_4_3319389-3323228 AUGUSTUS CDS 1 613 0.51 + 0 transcript_id "g49.t1"; gene_id "g49"; scaffold_4_3319389-3323228 AUGUSTUS CDS 785 915 1 + 2 transcript_id "g49.t1"; gene_id "g49"; scaffold_4_3319389-3323228 AUGUSTUS CDS 1348 3240 1 + 0 transcript_id "g49.t1"; gene_id "g49"; scaffold_4_3319389-3323228 AUGUSTUS stop_codon 3238 3240 . + 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [GRERMQGPSGASAQTSMPPQMMQQGPDGPQGGMWQGRGEMSYPNYPSRPGAPGGSGPPGPGYPGMNRSEEMMSSEQRM # NHEGQWGGQMGPRQPPYGPGGSGPPITRPLQPNYQSPQGMQNHIPQVSSPAPMPRPLESRTSPGKTPYMHGGIKMQKAGPPVPASHIVPPSAQSPLIR # RDMPFPPGSIEATHPILKTRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNTISTFNLNTLPGLLELVVEYFRRCLIEIFGILREY # EVGDPGQRTLLDPHALDQDWGSTEDELPDLEDVEQVDEDEEEDEEEGEKDKGMTEGQARVKDEEEAEPCSGPGGEEEEEEKKKKDEDEEKGAPPEQPS # SSQPPPALQERPKQASKFDKLPVKVVRKKDPFSASRSSRRGQVQEFDSGLLHWSAGGGDSTEHIQTHLERREGYLEPRQRVLIPMKLMKRRALEDMIL # DNVPLEKEEPKPAQTPSSDKTSASAEERAASEGVEVDAGDAPRCDDPKSQRESGVLPNDVGEDDSFLPKRAKVMGTILEDEPHSKDEGPLLTLANWQD # SLARRCVCISNIVRSLSFVPGNDQEMSKHPGLLLLLGRLILLHHRHPERKQAPLTYEKDEDSEESGASQRDEWWWDCLELLRENTLVTLANISGQLDL # SVYPESICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSALSPQRLVLETLSKLSIQDNNVDLILATPPFRRLEKLYGTLVRLVGDRRIAVCREMAVVLL # ANLAQGDSVAARAIAIQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQGMHFEPTSVDMMRRAARAMHAFAKVEENHSEFTLYESRLLDLSVSPLMNS # LVSHVICDVLFLIGQS] # end gene g49 ### # # ----- sequence number 48 (length = 4616, name = scaffold_4_6701837-6706452) ----- # # annotation: # Sequence scaffold_4_6701837-6706452 length=4616 scaffold_4_6701837-6706452 database start_codon 601 603 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 748 1321 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 1400 1649 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 1770 2066 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 2243 2361 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 2488 2969 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 3306 3434 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database intron 3562 3845 . + . transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 601 747 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 1322 1399 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 1650 1769 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 2067 2242 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 2362 2487 . + 1 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 2970 3305 . + 1 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 3435 3561 . + 1 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database CDS 3846 4016 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; scaffold_4_6701837-6706452 database stop_codon 4014 4016 . + 0 transcript_id "g_2088-T1.1"; gene_id "g_2088-T1"; # Predicted genes for sequence number 48 on both strands # start gene g50 scaffold_4_6701837-6706452 AUGUSTUS gene 601 4016 0.4 + . g50 scaffold_4_6701837-6706452 AUGUSTUS transcript 601 4016 0.4 + . g50.t1 scaffold_4_6701837-6706452 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 748 1321 0.91 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 1400 1649 0.89 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 1770 2066 0.49 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 2243 2361 1 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 2488 2969 1 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 3306 3434 1 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS intron 3562 3845 1 + . transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 601 747 0.86 + 0 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 1322 1399 0.91 + 0 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 1650 1769 0.49 + 0 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 2067 2242 1 + 0 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 2362 2487 1 + 1 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 2970 3305 1 + 1 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 3435 3561 1 + 1 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS CDS 3846 4016 0.98 + 0 transcript_id "g50.t1"; gene_id "g50"; scaffold_4_6701837-6706452 AUGUSTUS stop_codon 4014 4016 . + 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MDSGTVDSSITLVIKTPNQKYDDQTINCFLNWTVEMLKSHISDVYPSKPSSKDQRLVYSGRLLQDHLQLRDILRKQDE # YHMMHLVCASQSPPESPCPSNHNHASNPASLPSTSSMSSDNIGSTSLDTTPNQEAQSASFSSSSVSVTASDDGLRHRRGFPQSGPHNPTSTGGMQWPD # GRQYPIHGHLATGTNPHPIYMPMQMLWWQQMYARHYHMQYQAAIAASQPPSANLTSLPRPSPSPQPVQPNEPPPPLGPNPAPNPIREDRPANPNIQMN # AQGGPVMNEDEVNRDWLDWIYTMSRAAILVSIVYFYSSFSRFVMVMGAMLLVYLHQAGWFPFRPEFQNPRAGGVGAQGGAVAPQEEADRHQDIQEMER # IMDEGMEEEGDSDAEDGQEDGTAVRQPGFLSSAWSFISTFFTSLIPEVRPHPAN] # end gene g50 ### # # ----- sequence number 49 (length = 4517, name = scaffold_4_6845844-6850360) ----- # # annotation: # Sequence scaffold_4_6845844-6850360 length=4517 scaffold_4_6845844-6850360 database start_codon 601 603 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 648 851 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 967 1639 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 1787 1927 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 2117 2282 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 2433 2609 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 2745 2994 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 3098 3671 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database intron 3738 3840 . + . transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 601 647 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 852 966 . + 1 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 1640 1786 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 1928 2116 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 2283 2432 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 2610 2744 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 2995 3097 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 3672 3737 . + 2 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database CDS 3841 3917 . + 2 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; scaffold_4_6845844-6850360 database stop_codon 3915 3917 . + 0 transcript_id "g_2089-T1.1"; gene_id "g_2089-T1"; # Predicted genes for sequence number 49 on both strands # start gene g51 scaffold_4_6845844-6850360 AUGUSTUS gene 1 3917 0.9 + . g51 scaffold_4_6845844-6850360 AUGUSTUS transcript 1 3917 0.9 + . g51.t1 scaffold_4_6845844-6850360 AUGUSTUS intron 120 509 1 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 648 851 1 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 967 1639 1 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 1787 1927 1 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 2117 2282 0.93 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 2433 2609 0.98 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 2745 2994 1 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 3098 3671 0.98 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS intron 3738 3840 1 + . transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 1 119 1 + 0 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 510 647 1 + 1 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 852 966 1 + 1 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 1640 1786 1 + 0 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 1928 2116 1 + 0 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 2283 2432 0.91 + 0 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 2610 2744 1 + 0 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 2995 3097 1 + 0 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 3672 3737 0.99 + 2 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS CDS 3841 3917 1 + 2 transcript_id "g51.t1"; gene_id "g51"; scaffold_4_6845844-6850360 AUGUSTUS stop_codon 3915 3917 . + 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [RLGSSVDVTLPKDINATSLGQDKKSGPAKHPAPTGFDVPGVAVDALRILLARVQLDEVVRRLDQDGAWDTMKDPQRHT # AGVTLLSRAMAKHAGPRLPSVVECLCPCLNNIYECQRVTVTAFFSELLNHHVVTELMLMDVLMNNMMERISDPCSTVRMLAVRGLGNIAVGSPEKVNK # YAKELLAAMSSGMEEKDDPGKHITLEAMSGLSKVLLYLDKKNGHLLVVYIFMKIKPFLESENDDIRCASIMLLGNLSRFGSGEPIFKDQIHNVLVSLL # LHLADPNLQVVKACKYAMRVCAPVVGSEQITTMFQNHLHDDKGLHYGEFINDLTKYIIQDFPGMLNFYHISVLQFFKSNWAEVRAGAAMFIGFLLGNL # PEELFSHLNMGSVTKGLVMLLQDPDPVVRVKAAEAMGHFH] # end gene g51 ### # # ----- sequence number 50 (length = 3214, name = scaffold_4_7351775-7354988) ----- # # annotation: # Sequence scaffold_4_7351775-7354988 length=3214 scaffold_4_7351775-7354988 database start_codon 601 603 . + 0 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 642 1014 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 1092 1272 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 1406 1568 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 1692 1880 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 1963 2143 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 2218 2325 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database intron 2384 2497 . + . transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 601 641 . + 0 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 1015 1091 . + 1 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 1273 1405 . + 2 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 1569 1691 . + 1 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 1881 1962 . + 1 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 2144 2217 . + 0 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 2326 2383 . + 1 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database CDS 2498 2614 . + 0 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; scaffold_4_7351775-7354988 database stop_codon 2612 2614 . + 0 transcript_id "g_2093-T1.1"; gene_id "g_2093-T1"; # Predicted genes for sequence number 50 on both strands # start gene g52 scaffold_4_7351775-7354988 AUGUSTUS gene 1254 2614 0.37 + . g52 scaffold_4_7351775-7354988 AUGUSTUS transcript 1254 2614 0.37 + . g52.t1 scaffold_4_7351775-7354988 AUGUSTUS start_codon 1254 1256 . + 0 transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS intron 1406 1568 0.91 + . transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS intron 1692 2325 0.79 + . transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS intron 2384 2497 0.78 + . transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS CDS 1254 1405 0.55 + 0 transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS CDS 1569 1691 0.91 + 1 transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS CDS 2326 2383 0.79 + 1 transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS CDS 2498 2614 0.98 + 0 transcript_id "g52.t1"; gene_id "g52"; scaffold_4_7351775-7354988 AUGUSTUS stop_codon 2612 2614 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MTISLSATNGVVLATEKKQKSILYDEQSVHKVEPITKHIGMVYSGMGPDYRVLLRRARKLAQQYFLVYQEPIPTAQLV # QRVASVMQEYTQSGYNNDLELEDAIHTAILTLKESFEGQMTEENIEVGICNEAGFRRLTPAEVKDYLAAIA] # end gene g52 ### # # ----- sequence number 51 (length = 4728, name = scaffold_4_10303560-10308287) ----- # # annotation: # Sequence scaffold_4_10303560-10308287 length=4728 scaffold_4_10303560-10308287 database start_codon 601 603 . + 0 transcript_id "g_2106-T1.1"; gene_id "g_2106-T1"; scaffold_4_10303560-10308287 database intron 891 3197 . + . transcript_id "g_2106-T1.1"; gene_id "g_2106-T1"; scaffold_4_10303560-10308287 database CDS 601 890 . + 0 transcript_id "g_2106-T1.1"; gene_id "g_2106-T1"; scaffold_4_10303560-10308287 database CDS 3198 4128 . + 1 transcript_id "g_2106-T1.1"; gene_id "g_2106-T1"; scaffold_4_10303560-10308287 database stop_codon 4126 4128 . + 0 transcript_id "g_2106-T1.1"; gene_id "g_2106-T1"; # Predicted genes for sequence number 51 on both strands # start gene g53 scaffold_4_10303560-10308287 AUGUSTUS gene 2862 4128 0.4 + . g53 scaffold_4_10303560-10308287 AUGUSTUS transcript 2862 4128 0.4 + . g53.t1 scaffold_4_10303560-10308287 AUGUSTUS start_codon 2862 2864 . + 0 transcript_id "g53.t1"; gene_id "g53"; scaffold_4_10303560-10308287 AUGUSTUS intron 2888 3197 0.4 + . transcript_id "g53.t1"; gene_id "g53"; scaffold_4_10303560-10308287 AUGUSTUS CDS 2862 2887 0.4 + 0 transcript_id "g53.t1"; gene_id "g53"; scaffold_4_10303560-10308287 AUGUSTUS CDS 3198 4128 0.99 + 1 transcript_id "g53.t1"; gene_id "g53"; scaffold_4_10303560-10308287 AUGUSTUS stop_codon 4126 4128 . + 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MKTLPKQAKFVGINASDINYSAGRYDPTVKPPFDVGFEGVGEVVGLGLSASARYTVGDTVAYFGDGAFAEYTVVPVKK # TVPIPAVKPEFLTLLVSGATAYISLKRLGDLAEGQTVLVTAAAGGTGQFAVQFAKKAGCHVIGTCSSNEKAGFLKTIGCDRPINYASEDLAATLRTEY # PKGVDVIYESVGGSIFDLAVNSLATKGRLIVIGFISGYQTSSGVQPIRGGGTLPVKLLQKSASVRGFFLPHFLADYREALVSMMGLVGQGRLVCEVDC # GDLAPEGRFVGLEAVFRAVDYMYAGKNLGKVVVEVGQALDTSKL] # end gene g53 ### # # ----- sequence number 52 (length = 6429, name = scaffold_4_13412959-13419387) ----- # # annotation: # Sequence scaffold_4_13412959-13419387 length=6429 scaffold_4_13412959-13419387 database start_codon 601 603 . + 0 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 701 1670 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 1813 1926 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 2260 2441 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 2663 2814 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 3146 3255 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 3438 3541 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 3601 3756 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 3887 4579 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 4678 4835 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database intron 5168 5309 . + . transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 601 700 . + 0 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 1671 1812 . + 2 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 1927 2259 . + 1 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 2442 2662 . + 1 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 2815 3145 . + 2 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 3256 3437 . + 1 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 3542 3600 . + 2 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 3757 3886 . + 0 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 4580 4677 . + 2 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 4836 5167 . + 0 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database CDS 5310 5829 . + 1 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; scaffold_4_13412959-13419387 database stop_codon 5827 5829 . + 0 transcript_id "g_2126-T1.1"; gene_id "g_2126-T1"; # Predicted genes for sequence number 52 on both strands # start gene g54 scaffold_4_13412959-13419387 AUGUSTUS gene 601 5829 0.08 + . g54 scaffold_4_13412959-13419387 AUGUSTUS transcript 601 5829 0.08 + . g54.t1 scaffold_4_13412959-13419387 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 701 1670 0.86 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 1813 1926 1 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 2260 2441 1 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 2663 2814 0.91 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 3146 3255 1 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 3438 3760 0.57 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 3887 4579 0.63 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 4678 4835 0.94 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS intron 5168 5327 0.36 + . transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 601 700 0.43 + 0 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 1671 1812 1 + 2 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 1927 2259 0.98 + 1 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 2442 2662 1 + 1 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 2815 3145 0.91 + 2 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 3256 3437 0.97 + 1 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 3761 3886 0.57 + 2 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 4580 4677 0.94 + 2 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 4836 5167 0.85 + 0 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS CDS 5328 5829 0.36 + 1 transcript_id "g54.t1"; gene_id "g54"; scaffold_4_13412959-13419387 AUGUSTUS stop_codon 5827 5829 . + 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MSRESQGTFWNITGSRMLVLWMSIPLALLRICAASPGDPWGQCPTTRQCKAKFADRSCDKECTEPECLMDGFDCLKQV # QCNPGHIQYCRDHYANHHCELGCNNAPCGWDGSDCFRHQSPKWAKGTLVLHTRVPLQHGTFSNSSLLWALSIQLKTALKLRGSVSLDSSKDLLNFDSQ # QLAELLAQGSSYDANGSVLFLQVDNRPCLHHAPSTCFLYATEAANFLRAVMSLKRMSLPFPPDLEAIVSVRGLREEIGGREEDKVEQETVETTPSWLW # AVIGVAIGLAMALALAVVLVTRKVRRCRMEREVGERVRHRSTVTDSSEGGAKTWAQHTPHRERRGRVGREKDRNGMKKKKKAKEAEKKRRREPLGEDA # IRMRPLKRNLDIGSDTDFTQSSMEDINARCSTRREDPSICDHRSPEQKHFRVTPSHSQSPRPIQPPVQWCGPDGSVVLIRAVRSGLDRVVLELLRAGV # PVNNTDHTGRSALHWACSVNHLSLTRTLTRYGAAVDLQDNKGETPLFLAALHGCYDTARFLLLNGANQELHDRRGRRPLDVAREGMHHQVLELLLAHR # VQRGPIPMDPSNEMLWDERGLMYSPWATSQGVPGRSSSFSGVIEQRYMTPPQPRVQCPSPQNWRPQLNQSATALVTPRIMGRPPRPISTLQEVTSEAE # DEDRERPQEVPRAATPHFLLPQPAPRQRSFSCTQHALQRRISTHQPASPLNVVHLETSNEPIERVIVVAPTDAPTQSDRRSTTDNNDIISKAEAEAAS # STNVEQRGKTEKLNNMADSTQTAL] # end gene g54 ### # # ----- sequence number 53 (length = 3134, name = scaffold_4_13424722-13427855) ----- # # annotation: # Sequence scaffold_4_13424722-13427855 length=3134 scaffold_4_13424722-13427855 database start_codon 601 603 . + 0 transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database intron 1153 1467 . + . transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database intron 1634 1925 . + . transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database intron 2153 2393 . + . transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database CDS 601 1152 . + 0 transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database CDS 1468 1633 . + 0 transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database CDS 1926 2152 . + 2 transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database CDS 2394 2534 . + 0 transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; scaffold_4_13424722-13427855 database stop_codon 2532 2534 . + 0 transcript_id "g_2127-T1.1"; gene_id "g_2127-T1"; # Predicted genes for sequence number 53 on both strands # start gene g55 scaffold_4_13424722-13427855 AUGUSTUS gene 601 2534 0.46 + . g55 scaffold_4_13424722-13427855 AUGUSTUS transcript 601 2534 0.46 + . g55.t1 scaffold_4_13424722-13427855 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS intron 1153 1467 0.87 + . transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS intron 1634 1925 1 + . transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS intron 2153 2393 0.85 + . transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS CDS 601 1152 0.56 + 0 transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS CDS 1468 1633 1 + 0 transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS CDS 1926 2152 0.85 + 2 transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS CDS 2394 2534 1 + 0 transcript_id "g55.t1"; gene_id "g55"; scaffold_4_13424722-13427855 AUGUSTUS stop_codon 2532 2534 . + 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MECSEHEVAVFEEQPFEPLIIIEEGDITENTVTKGPETMIDGDSTPDVGQTGTLSSKTEADGDPGRNPCQVKQENNLD # KTNRYLETNEEETASPGSDKVEEPGGGRTEETENNQEIIKQDMGGETTDHKSQEEIRMGEVQAQNAEEDRKLHIETSAQTQVDTKKLSPSNQPLNKMS # STADTQQQAQQLTHDFPDTLYELLCTLQEGRRLNDQRCSFTMERGERRRRCHSEPSITMPPCRVIFSSMTSLQKEEFFEFVATSQARRLNDQRAELLK # SSPPKPKANRIRGSIKLSIVRKSPPIAVPKEDLYNMILSSQAQGRLEEQRSNAPGPMDDEDFFSLLLKVQGGRMEEQRTELPTAVSI] # end gene g55 ### # # ----- sequence number 54 (length = 3268, name = scaffold_4_13850145-13853412) ----- # # annotation: # Sequence scaffold_4_13850145-13853412 length=3268 scaffold_4_13850145-13853412 database start_codon 601 603 . + 0 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database intron 680 829 . + . transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database intron 997 1092 . + . transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database intron 1207 1401 . + . transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database intron 1515 1677 . + . transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database intron 1729 1884 . + . transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database CDS 601 679 . + 0 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database CDS 830 996 . + 2 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database CDS 1093 1206 . + 0 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database CDS 1402 1514 . + 0 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database CDS 1678 1728 . + 1 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database CDS 1885 2668 . + 1 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; scaffold_4_13850145-13853412 database stop_codon 2666 2668 . + 0 transcript_id "g_2134-T1.1"; gene_id "g_2134-T1"; # Predicted genes for sequence number 54 on both strands # start gene g56 scaffold_4_13850145-13853412 AUGUSTUS gene 601 2668 0.72 + . g56 scaffold_4_13850145-13853412 AUGUSTUS transcript 601 2668 0.72 + . g56.t1 scaffold_4_13850145-13853412 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS intron 680 829 0.84 + . transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS intron 997 1092 0.99 + . transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS intron 1207 1401 1 + . transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS intron 1515 1677 0.98 + . transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS intron 1729 1884 0.98 + . transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS CDS 601 679 0.78 + 0 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS CDS 830 996 1 + 2 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS CDS 1093 1206 0.99 + 0 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS CDS 1402 1514 1 + 0 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS CDS 1678 1728 0.98 + 1 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS CDS 1885 2668 0.96 + 1 transcript_id "g56.t1"; gene_id "g56"; scaffold_4_13850145-13853412 AUGUSTUS stop_codon 2666 2668 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MAETVQEKSRGMKFAEQQLLRHGWEKGKGLGREENGISEAIKVKVKCDKSGVGHCHSEQFTFHWWDHVFNKASSSLEV # ESDQNGVKMRKLVEEDEQGLISNKKPRKASMAKAKLYGRFVKSATLLSGQELSEQKPSSSDDSNSSDDEDQRLDLSSTTKLSDADLLKACGGLTAHKG # ARHGLTMSAKLARLEQQEQEFMLKYGKKNQSITPVTAGPVTPDVVEEPVKETHCKKAKRKRGKDSQEDITTDDTGTKSTNLETKLKKNTKKSFNGISG # GLTDISMPTQSKPTPVENESEAQATKKKRSKKRKLMEGNSDTSNKVRYDTSVTPQVTNSEEEAEEASIQKMEDNLTQQQTEVTETNTKRKKKKKSSKS # TREIAVVEENNDQETSQTRTTEVLSKKKKKRETAVEVDSYDNPEPLEDELKRKKKKKQGGECN] # end gene g56 ### # # ----- sequence number 55 (length = 2693, name = scaffold_4_14406641-14409333) ----- # # annotation: # Sequence scaffold_4_14406641-14409333 length=2693 scaffold_4_14406641-14409333 database start_codon 601 603 . + 0 transcript_id "g_2139-T1.1"; gene_id "g_2139-T1"; scaffold_4_14406641-14409333 database intron 988 1949 . + . transcript_id "g_2139-T1.1"; gene_id "g_2139-T1"; scaffold_4_14406641-14409333 database CDS 601 987 . + 0 transcript_id "g_2139-T1.1"; gene_id "g_2139-T1"; scaffold_4_14406641-14409333 database CDS 1950 2093 . + 0 transcript_id "g_2139-T1.1"; gene_id "g_2139-T1"; scaffold_4_14406641-14409333 database stop_codon 2091 2093 . + 0 transcript_id "g_2139-T1.1"; gene_id "g_2139-T1"; # Predicted genes for sequence number 55 on both strands # start gene g57 scaffold_4_14406641-14409333 AUGUSTUS gene 601 2093 0.53 + . g57 scaffold_4_14406641-14409333 AUGUSTUS transcript 601 2093 0.53 + . g57.t1 scaffold_4_14406641-14409333 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g57.t1"; gene_id "g57"; scaffold_4_14406641-14409333 AUGUSTUS intron 988 1949 1 + . transcript_id "g57.t1"; gene_id "g57"; scaffold_4_14406641-14409333 AUGUSTUS CDS 601 987 0.53 + 0 transcript_id "g57.t1"; gene_id "g57"; scaffold_4_14406641-14409333 AUGUSTUS CDS 1950 2093 1 + 0 transcript_id "g57.t1"; gene_id "g57"; scaffold_4_14406641-14409333 AUGUSTUS stop_codon 2091 2093 . + 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MDPNKSPSAPPAAWNSGEKSTMGQPPPPSYQEYPQYPGPGQPQPGYYPGQPQGYVPPPHAMGDPGYGQPYSGGMYPHG # AQATVAVQPTTVYVTRAPLANPVPDYLGYSIFTMLCCCLPIGIAALVSSIATRDANTQGNADAAQKSSRRAKTLNHTALGIGLAILIIWIVMSVVVNH] # end gene g57 ### # # ----- sequence number 56 (length = 9141, name = scaffold_4_15173435-15182575) ----- # # annotation: # Sequence scaffold_4_15173435-15182575 length=9141 scaffold_4_15173435-15182575 database start_codon 601 603 . + 0 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database intron 659 1793 . + . transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database intron 1916 2293 . + . transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database intron 2502 3435 . + . transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database intron 3585 5394 . + . transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database intron 5540 7098 . + . transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database intron 7247 8453 . + . transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 601 658 . + 0 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 1794 1915 . + 2 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 2294 2501 . + 0 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 3436 3584 . + 2 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 5395 5539 . + 0 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 7099 7246 . + 2 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database CDS 8454 8541 . + 1 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; scaffold_4_15173435-15182575 database stop_codon 8539 8541 . + 0 transcript_id "g_2152-T1.1"; gene_id "g_2152-T1"; # Predicted genes for sequence number 56 on both strands # start gene g58 scaffold_4_15173435-15182575 AUGUSTUS gene 601 8541 0.45 + . g58 scaffold_4_15173435-15182575 AUGUSTUS transcript 601 8541 0.45 + . g58.t1 scaffold_4_15173435-15182575 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS intron 659 1793 0.5 + . transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS intron 1916 2293 1 + . transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS intron 2502 3435 1 + . transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS intron 3585 5394 1 + . transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS intron 5540 7098 0.89 + . transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS intron 7247 8453 1 + . transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 601 658 0.5 + 0 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 1794 1915 0.92 + 2 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 2294 2501 1 + 0 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 3436 3584 1 + 2 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 5395 5539 0.89 + 0 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 7099 7246 0.99 + 2 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS CDS 8454 8541 1 + 1 transcript_id "g58.t1"; gene_id "g58"; scaffold_4_15173435-15182575 AUGUSTUS stop_codon 8539 8541 . + 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MKAILLLTLVATVNIYGCYAALMIQGPTQPVLEGDRVTLECLISDSDLNISQVHFQRYARYMNTWFNLEPEGAFYRRC # WQYDVDVSRDDGRLLLYISQIYSYSQGPYRCVAQNGSAADNSSEPLSITVHYMREISVHRTGFTRYFSGSMQDLRVPLGDDVEVECSATASEAPDYFW # QKEGEDWILPSSKLFLKKMQVEDGGAYTCVASHPTVPTLKKSRTISITVLSEDAPWYESTNGRLILMTSAASVAIVVVILSMSVFLYRRTKQNTAQSK # GPIDDHSQKKPIYKASSESLPSTSGDKQPLV] # end gene g58 ### # # ----- sequence number 57 (length = 1930, name = scaffold_4_15495739-15497668) ----- # # annotation: # Sequence scaffold_4_15495739-15497668 length=1930 scaffold_4_15495739-15497668 database start_codon 601 603 . + 0 transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; scaffold_4_15495739-15497668 database intron 775 902 . + . transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; scaffold_4_15495739-15497668 database intron 972 1075 . + . transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; scaffold_4_15495739-15497668 database CDS 601 774 . + 0 transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; scaffold_4_15495739-15497668 database CDS 903 971 . + 0 transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; scaffold_4_15495739-15497668 database CDS 1076 1330 . + 0 transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; scaffold_4_15495739-15497668 database stop_codon 1328 1330 . + 0 transcript_id "g_2155-T1.1"; gene_id "g_2155-T1"; # Predicted genes for sequence number 57 on both strands # start gene g59 scaffold_4_15495739-15497668 AUGUSTUS gene 601 1330 0.22 + . g59 scaffold_4_15495739-15497668 AUGUSTUS transcript 601 1330 0.22 + . g59.t1 scaffold_4_15495739-15497668 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g59.t1"; gene_id "g59"; scaffold_4_15495739-15497668 AUGUSTUS intron 775 902 0.99 + . transcript_id "g59.t1"; gene_id "g59"; scaffold_4_15495739-15497668 AUGUSTUS intron 972 1105 0.73 + . transcript_id "g59.t1"; gene_id "g59"; scaffold_4_15495739-15497668 AUGUSTUS CDS 601 774 0.3 + 0 transcript_id "g59.t1"; gene_id "g59"; scaffold_4_15495739-15497668 AUGUSTUS CDS 903 971 0.99 + 0 transcript_id "g59.t1"; gene_id "g59"; scaffold_4_15495739-15497668 AUGUSTUS CDS 1106 1330 0.74 + 0 transcript_id "g59.t1"; gene_id "g59"; scaffold_4_15495739-15497668 AUGUSTUS stop_codon 1328 1330 . + 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MRLTLQMFISHGRVARRMGLGPESRINMLRNILTGLVRHERIETTLGRADEVRFYAEKLIDYAKKGDTDEKAMKMASF # WLTVLAPRFESQRKDYTRMARIPNRENLDRAKMAVLEYRKNPFPPLYPVRKNSELNLINQLLKAYKEEKKQKATDKI] # end gene g59 ### # # ----- sequence number 58 (length = 15250, name = scaffold_4_16650029-16665278) ----- # # annotation: # Sequence scaffold_4_16650029-16665278 length=15250 scaffold_4_16650029-16665278 database start_codon 601 603 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 609 1840 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 1964 2574 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 2770 5751 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 5942 7541 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 7659 7768 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 7895 8610 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 8708 8998 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 9079 9263 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 9411 9549 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 9682 11122 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 11278 12064 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 12133 12560 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 12713 13309 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database intron 13387 14720 . + . transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 601 608 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 1841 1963 . + 1 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 2575 2769 . + 1 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 5752 5941 . + 1 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 7542 7658 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 7769 7894 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 8611 8707 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 8999 9078 . + 2 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 9264 9410 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 9550 9681 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 11123 11277 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 12065 12132 . + 1 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 12561 12712 . + 2 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 13310 13386 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database CDS 14721 14823 . + 1 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; scaffold_4_16650029-16665278 database stop_codon 14821 14823 . + 0 transcript_id "g_2160-T1.1"; gene_id "g_2160-T1"; # Predicted genes for sequence number 58 on both strands # start gene g60 scaffold_4_16650029-16665278 AUGUSTUS gene 1 13390 0.29 + . g60 scaffold_4_16650029-16665278 AUGUSTUS transcript 1 13390 0.29 + . g60.t1 scaffold_4_16650029-16665278 AUGUSTUS intron 1 586 0.75 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 609 1840 0.98 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 1964 2574 1 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 2770 5751 0.99 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 5942 7541 0.87 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 7659 7768 1 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 7895 8610 1 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 8708 8998 0.99 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 9079 9263 0.96 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 9411 9549 0.96 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 9682 11122 1 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 11278 12064 1 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 12133 12560 1 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS intron 12713 13309 0.8 + . transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 587 608 0.75 + 2 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 1841 1963 1 + 1 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 2575 2769 1 + 1 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 5752 5941 1 + 1 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 7542 7658 1 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 7769 7894 1 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 8611 8707 0.99 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 8999 9078 1 + 2 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 9264 9410 0.96 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 9550 9681 0.96 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 11123 11277 1 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 12065 12132 1 + 1 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 12561 12712 0.96 + 2 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS CDS 13310 13390 0.53 + 0 transcript_id "g60.t1"; gene_id "g60"; scaffold_4_16650029-16665278 AUGUSTUS stop_codon 13388 13390 . + 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [LQVNMVRWFHRDVSGLEAENLLKTKGSHGSFLARPSKKNPGDFSLSVRVGDLVTHIRIQNTGDFYDLYGGEKFASLSE # LVDYYTADVGVLQDKDGTLIELKYPLNCSDPTTERWYHGHLSGTNAEKLLWERNEPGTYLVRESLSKPGDFVLSVVTEEKSKTSSGCQRVAHIKLVCQ # NDRYTIGGSEVFDTLSDLVEHYKRKGIEEISGNWVYLRQPYFSTRVNAADIERRVKLLDLKAENPEEGEKNCKAGFWEEFDALQKLETKIKKSREEGM # RPENKSKNRYKNILPFNETRVVLKGGDPNVVGSDYINANYVKNTLWEQDNQKVYIATQGCLASTVNDFWQMVWQEKTRVIVMTTREVEKGRNKCVSYW # PELHCSKEVGRYLVKSTSEREVSDYKIRILEISPLDQSGSHRTIWHYQYLSWPDHGVPEEPGCVLSFLSEVNSKQDEFPGAGPMIIHCSAGIGRTGTF # VVVDMIIKTIDTQGLDCDIDIQKSIQMVREQRSGMVQTEAQYKFIYHAVSNYIETEKATSKASKETELEYGNLKPMPRSTHQIASRKPSK] # end gene g60 ### # # ----- sequence number 59 (length = 5681, name = scaffold_4_19212443-19218123) ----- # # annotation: # Sequence scaffold_4_19212443-19218123 length=5681 scaffold_4_19212443-19218123 database start_codon 601 603 . + 0 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 701 977 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 1038 1140 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 1248 1331 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 1400 1782 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 1908 2458 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 2633 2939 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 3050 3220 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 3303 4089 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database intron 4171 4935 . + . transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 601 700 . + 0 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 978 1037 . + 2 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 1141 1247 . + 2 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 1332 1399 . + 0 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 1783 1907 . + 1 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 2459 2632 . + 2 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 2940 3049 . + 2 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 3221 3302 . + 0 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 4090 4170 . + 2 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database CDS 4936 5081 . + 2 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; scaffold_4_19212443-19218123 database stop_codon 5079 5081 . + 0 transcript_id "g_2173-T1.1"; gene_id "g_2173-T1"; # Predicted genes for sequence number 59 on both strands # start gene g61 scaffold_4_19212443-19218123 AUGUSTUS gene 601 5081 0.24 + . g61 scaffold_4_19212443-19218123 AUGUSTUS transcript 601 5081 0.24 + . g61.t1 scaffold_4_19212443-19218123 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 701 977 0.79 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 1038 1140 0.98 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 1248 1331 1 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 1400 1782 1 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 1908 2458 1 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 2633 2939 1 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 3050 3220 1 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 3303 4089 0.99 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 4171 4509 0.63 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS intron 4613 4948 0.49 + . transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 601 700 0.69 + 0 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 978 1037 0.98 + 2 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 1141 1247 1 + 2 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 1332 1399 1 + 0 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 1783 1907 1 + 1 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 2459 2632 1 + 2 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 2940 3049 1 + 2 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 3221 3302 0.99 + 0 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 4090 4170 0.99 + 2 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 4510 4612 0.63 + 2 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS CDS 4949 5081 0.98 + 1 transcript_id "g61.t1"; gene_id "g61"; scaffold_4_19212443-19218123 AUGUSTUS stop_codon 5079 5081 . + 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MNGQSSSPGGSSDITPVQQMIASCSGAILTSLIVTPLDVVKIRLQAQKTPFPKGKCFVYCNGLMDHICVCENGNSRPW # YKAPGHFNGTLDALIKIVGREGIRSLWSGLPPTLVMAVPATVIYFTCYDQLCTTLRARMGPYSDEAPLLAGAIARVGSATVISPLELVRTRLQSQQQS # YRELTEAISSAVKVEGWRTLWRGWGPTLLRDVPFSAMYWYNYEKGKMWLCQHYQTEQPTVAITFISGAVSGSIASIATLPFDVVKTRRQVELGELQAM # NLSARTSSSTLSVMRKIVAENGAAGLFADWSVMLSVLDWEVTDSAVFDCVRLEVTDSAVFDWRLIKVAPACAIMISTYEFGKTFFRQHNQDRLQAARA # LSLETHHT] # end gene g61 ### # # ----- sequence number 60 (length = 3508, name = scaffold_5_6044898-6048405) ----- # # annotation: # Sequence scaffold_5_6044898-6048405 length=3508 scaffold_5_6044898-6048405 database start_codon 601 603 . + 0 transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database intron 978 1916 . + . transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database intron 2131 2359 . + . transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database intron 2555 2698 . + . transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database CDS 601 977 . + 0 transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database CDS 1917 2130 . + 1 transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database CDS 2360 2554 . + 0 transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database CDS 2699 2908 . + 0 transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; scaffold_5_6044898-6048405 database stop_codon 2906 2908 . + 0 transcript_id "g_2210-T1.1"; gene_id "g_2210-T1"; # Predicted genes for sequence number 60 on both strands # start gene g62 scaffold_5_6044898-6048405 AUGUSTUS gene 1 2908 0.5 + . g62 scaffold_5_6044898-6048405 AUGUSTUS transcript 1 2908 0.5 + . g62.t1 scaffold_5_6044898-6048405 AUGUSTUS intron 1 1916 0.75 + . transcript_id "g62.t1"; gene_id "g62"; scaffold_5_6044898-6048405 AUGUSTUS intron 2131 2359 0.66 + . transcript_id "g62.t1"; gene_id "g62"; scaffold_5_6044898-6048405 AUGUSTUS intron 2555 2698 1 + . transcript_id "g62.t1"; gene_id "g62"; scaffold_5_6044898-6048405 AUGUSTUS CDS 1917 2130 0.66 + 1 transcript_id "g62.t1"; gene_id "g62"; scaffold_5_6044898-6048405 AUGUSTUS CDS 2360 2554 1 + 0 transcript_id "g62.t1"; gene_id "g62"; scaffold_5_6044898-6048405 AUGUSTUS CDS 2699 2908 1 + 0 transcript_id "g62.t1"; gene_id "g62"; scaffold_5_6044898-6048405 AUGUSTUS stop_codon 2906 2908 . + 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [WGIPLGITIAALSLHKIGYDASEVSVGWCWVSISAPDHVLWMLLTGKIWEFLAYITLPILYILIKRHIYRAHAALSEY # RPILAASPLSNSLSSMADRKLTLIPVIFIVLRIWSTIRFILMLVESPARQNPVLITLHGIGNTFQGAANCIMFVLCTQPIRSRLFKLLCSCCCLCKTE # ASPPPLPPSHRRTADREANAAPGVCADEC] # end gene g62 ### # # ----- sequence number 61 (length = 7863, name = scaffold_5_6720944-6728806) ----- # # annotation: # Sequence scaffold_5_6720944-6728806 length=7863 scaffold_5_6720944-6728806 database start_codon 601 603 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 712 800 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 927 1482 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 1540 1678 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 1794 2429 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 2525 2788 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 2852 3268 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 3393 4208 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 4330 4484 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 4583 4730 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 4837 4932 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 4976 5080 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 5172 5494 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database intron 5573 7225 . + . transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 601 711 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 801 926 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 1483 1539 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 1679 1793 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 2430 2524 . + 2 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 2789 2851 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 3269 3392 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 4209 4329 . + 2 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 4485 4582 . + 1 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 4731 4836 . + 2 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 4933 4975 . + 1 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 5081 5171 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 5495 5572 . + 2 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database CDS 7226 7263 . + 2 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; scaffold_5_6720944-6728806 database stop_codon 7261 7263 . + 0 transcript_id "g_2212-T1.1"; gene_id "g_2212-T1"; # Predicted genes for sequence number 61 on both strands # start gene g63 scaffold_5_6720944-6728806 AUGUSTUS gene 1 5889 0.34 + . g63 scaffold_5_6720944-6728806 AUGUSTUS transcript 1 5889 0.34 + . g63.t1 scaffold_5_6720944-6728806 AUGUSTUS intron 1 577 0.93 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 712 800 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 927 1482 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 1540 1678 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 1794 2429 0.98 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 2525 2788 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 2852 3268 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 3393 4208 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 4330 4484 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 4583 4730 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 4837 4932 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 4976 5080 1 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 5172 5494 0.99 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS intron 5573 5809 0.59 + . transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 578 711 1 + 2 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 801 926 1 + 0 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 1483 1539 1 + 0 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 1679 1793 1 + 0 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 2430 2524 0.99 + 2 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 2789 2851 1 + 0 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 3269 3392 1 + 0 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 4209 4329 1 + 2 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 4485 4582 1 + 1 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 4731 4836 1 + 2 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 4933 4975 1 + 1 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 5081 5171 1 + 0 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 5495 5572 0.84 + 2 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS CDS 5810 5889 0.38 + 2 transcript_id "g63.t1"; gene_id "g63"; scaffold_5_6720944-6728806 AUGUSTUS stop_codon 5887 5889 . + 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [IVHEDVKMGSDGESDQVSATSSEEVHSPVRVRMRDKPGRKISTEDINKRLSLPADIRLPDGYLEKFSLNSPLFDKPLS # RRLRRVSLSEIGFGKLETYVKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTQKSLTLVFEYLD # KDLKQYLDDCGNSIHVHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTH # IDMWGVGCIFYEMSTGRPLFPGSTVEEELHFIFKLLGTPTEESWPGITSNEDFISYNYPRYRADRLHNHTPRLDNEGVELLSKLLQFEGKKRISAEES # MRHLYFHSLGERVLTLPDSTSIFALQDIQLEKEAGIRSSSLSDSELLQRCLRFRHTLGRFCSPPPLARRL] # end gene g63 ### # start gene g64 scaffold_5_6720944-6728806 AUGUSTUS gene 6814 7328 0.63 + . g64 scaffold_5_6720944-6728806 AUGUSTUS transcript 6814 7328 0.63 + . g64.t1 scaffold_5_6720944-6728806 AUGUSTUS start_codon 6814 6816 . + 0 transcript_id "g64.t1"; gene_id "g64"; scaffold_5_6720944-6728806 AUGUSTUS intron 6918 7225 0.95 + . transcript_id "g64.t1"; gene_id "g64"; scaffold_5_6720944-6728806 AUGUSTUS CDS 6814 6917 0.63 + 0 transcript_id "g64.t1"; gene_id "g64"; scaffold_5_6720944-6728806 AUGUSTUS CDS 7226 7328 0.97 + 1 transcript_id "g64.t1"; gene_id "g64"; scaffold_5_6720944-6728806 AUGUSTUS stop_codon 7326 7328 . + 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MAILLGSSLLPWACRTLHSSVRSNSVDNSTMLPACEQYISTPEPALLREAREFEAKKPGHFFFFFFLR] # end gene g64 ### # # ----- sequence number 62 (length = 2827, name = scaffold_5_6847030-6849856) ----- # # annotation: # Sequence scaffold_5_6847030-6849856 length=2827 scaffold_5_6847030-6849856 database start_codon 601 603 . + 0 transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database intron 746 972 . + . transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database intron 1102 1286 . + . transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database intron 1524 1967 . + . transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database CDS 601 745 . + 0 transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database CDS 973 1101 . + 2 transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database CDS 1287 1523 . + 2 transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database CDS 1968 2227 . + 2 transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; scaffold_5_6847030-6849856 database stop_codon 2225 2227 . + 0 transcript_id "g_2213-T1.1"; gene_id "g_2213-T1"; # Predicted genes for sequence number 62 on both strands # start gene g65 scaffold_5_6847030-6849856 AUGUSTUS gene 1 2227 0.67 + . g65 scaffold_5_6847030-6849856 AUGUSTUS transcript 1 2227 0.67 + . g65.t1 scaffold_5_6847030-6849856 AUGUSTUS intron 1 564 0.88 + . transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS intron 746 972 0.79 + . transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS intron 1102 1286 0.98 + . transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS intron 1524 1967 0.99 + . transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS CDS 565 745 0.91 + 0 transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS CDS 973 1101 0.79 + 2 transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS CDS 1287 1523 1 + 2 transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS CDS 1968 2227 0.99 + 2 transcript_id "g65.t1"; gene_id "g65"; scaffold_5_6847030-6849856 AUGUSTUS stop_codon 2225 2227 . + 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [GRLQVTGQETGTMEAGVPLQGGEGNTQTGVTQTGPSQAQEQPECLIITQPLPSRTLPEPTKFTSETARTEDGESDDST # TENLSTNDVARLLPGHKSSNHKTPKEDIQSKEDSTLSPDAQITGDPAITTPPSASTSPLPTPCNGHRGQEGQGSPGNKQRLPSATKSQQSFKADAAQI # QQVAGDDCCVHCVLACLFCEVLSLCSVLSQCLACGPGCEVLCCCGEGASGGMACCDEDACSALWDCGILEDCCESSDCLEICLECCSICFPA] # end gene g65 ### # # ----- sequence number 63 (length = 6912, name = scaffold_5_6909802-6916713) ----- # # annotation: # Sequence scaffold_5_6909802-6916713 length=6912 scaffold_5_6909802-6916713 database start_codon 601 603 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 713 864 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 1033 1237 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 1382 1499 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 1622 1911 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 2151 3094 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 3210 3670 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 3784 3912 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 4121 4230 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 4300 4423 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 4682 5146 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 5544 5764 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database intron 5876 6181 . + . transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 601 712 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 865 1032 . + 2 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 1238 1381 . + 2 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 1500 1621 . + 2 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 1912 2150 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 3095 3209 . + 1 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 3671 3783 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 3913 4120 . + 1 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 4231 4299 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 4424 4681 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 5147 5543 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 5765 5875 . + 2 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database CDS 6182 6312 . + 2 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; scaffold_5_6909802-6916713 database stop_codon 6310 6312 . + 0 transcript_id "g_2214-T1.1"; gene_id "g_2214-T1"; # Predicted genes for sequence number 63 on both strands # start gene g66 scaffold_5_6909802-6916713 AUGUSTUS gene 951 4726 0.18 + . g66 scaffold_5_6909802-6916713 AUGUSTUS transcript 951 4726 0.18 + . g66.t1 scaffold_5_6909802-6916713 AUGUSTUS start_codon 951 953 . + 0 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 1033 1535 0.51 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 1622 1911 0.98 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 2151 3094 0.96 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 3210 3670 1 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 3784 3912 0.91 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 4121 4230 0.71 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS intron 4300 4423 0.92 + . transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 951 1032 0.6 + 0 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 1536 1621 0.53 + 2 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 1912 2150 0.95 + 0 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 3095 3209 1 + 1 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 3671 3783 1 + 0 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 3913 4120 0.91 + 1 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 4231 4299 0.71 + 0 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS CDS 4424 4726 0.88 + 0 transcript_id "g66.t1"; gene_id "g66"; scaffold_5_6909802-6916713 AUGUSTUS stop_codon 4724 4726 . + 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MRNGTVGDLLDILEEQQLFRPRDIILSXDQGLKVLPTPGPPPRELESQIVPAEHPRPMAPVSLELSNAMCWPFEEVQH # GTDNFSVAHLIGEGGFGHVYHASMRNTDYAVKKLKEDSPMDWNIVKESFKTEVEKMSRYRHTNIVELMGYSVGGGTYCLLYTFMPHRSLEDQLHNTGS # AAPSWTQRVSVMLGTAKAIQFLHSCSPALIHGDIKSSNILLGEHLEAKLGDFGLARFCSPPGRSAGKTTMVARTKTVRGTLAYLPDEYVKNGELGVGI # DIYSFGVVLLEVLTGRRALELDSQSKVVYLKDLVLEGDDNSILTKGKSNQGPSLSPAATRIWKNHMDPRLKAECELSSTCAGPGAWPAGLPGSQDLAG # LACCCLEPRKKRRPPMTEVCVCTGLLLGKNRP] # end gene g66 ### # # ----- sequence number 64 (length = 3681, name = scaffold_5_6930921-6934601) ----- # # annotation: # Sequence scaffold_5_6930921-6934601 length=3681 scaffold_5_6930921-6934601 database start_codon 601 603 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 676 852 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 967 1291 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 1481 1708 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 1831 1975 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 2039 2134 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 2259 2469 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database intron 2626 2892 . + . transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 601 675 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 853 966 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 1292 1480 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 1709 1830 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 1976 2038 . + 1 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 2135 2258 . + 1 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 2470 2625 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database CDS 2893 3081 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; scaffold_5_6930921-6934601 database stop_codon 3079 3081 . + 0 transcript_id "g_2216-T1.1"; gene_id "g_2216-T1"; # Predicted genes for sequence number 64 on both strands # start gene g67 scaffold_5_6930921-6934601 AUGUSTUS gene 601 3081 0.76 + . g67 scaffold_5_6930921-6934601 AUGUSTUS transcript 601 3081 0.76 + . g67.t1 scaffold_5_6930921-6934601 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 676 852 0.97 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 967 1291 1 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 1481 1708 1 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 1831 1975 0.78 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 2039 2134 0.78 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 2259 2469 1 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS intron 2626 2892 1 + . transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 601 675 0.97 + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 853 966 1 + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 1292 1480 1 + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 1709 1830 1 + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 1976 2038 0.78 + 1 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 2135 2258 1 + 1 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 2470 2625 1 + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS CDS 2893 3081 1 + 0 transcript_id "g67.t1"; gene_id "g67"; scaffold_5_6930921-6934601 AUGUSTUS stop_codon 3079 3081 . + 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MDQYSILGRIGEGAHGIVFKAKHIETGETVALKKVALRKLEDGIPNQALREIKALQEIEDNQYVVKLKDMFPHGTGFV # LVFEYMLSDLSEVIRNSQRPLTESQVKGYMMMLLKGVAFCHENSIMHRDLKPANLLISSTGHLKIADFGLARLFSNDGERLYSHQVATRWYRAPELLY # GARKYDEGVDLWAVGCIFGELLNNSPLFPGENDIEQLCCVLRVLGTPNQTVWPEITELPDYNKITFKENPPIPLEEIVPDTSAQAVDLLNKFLVYPSK # QRISAQQALLHPYFFTAPLPAHHSELPIPQRGGKHSRQRLQPPVEFTVDLPLQESLVEPSLIQGHAWCL] # end gene g67 ### # # ----- sequence number 65 (length = 3253, name = scaffold_5_8372148-8375400) ----- # # annotation: # Sequence scaffold_5_8372148-8375400 length=3253 scaffold_5_8372148-8375400 database start_codon 601 603 . + 0 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database intron 829 1077 . + . transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database intron 1170 1431 . + . transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database intron 1483 1768 . + . transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database intron 1895 2144 . + . transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database intron 2299 2458 . + . transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database CDS 601 828 . + 0 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database CDS 1078 1169 . + 0 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database CDS 1432 1482 . + 1 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database CDS 1769 1894 . + 1 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database CDS 2145 2298 . + 1 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database CDS 2459 2653 . + 0 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; scaffold_5_8372148-8375400 database stop_codon 2651 2653 . + 0 transcript_id "g_2222-T1.1"; gene_id "g_2222-T1"; # Predicted genes for sequence number 65 on both strands # start gene g68 scaffold_5_8372148-8375400 AUGUSTUS gene 601 2653 0.51 + . g68 scaffold_5_8372148-8375400 AUGUSTUS transcript 601 2653 0.51 + . g68.t1 scaffold_5_8372148-8375400 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS intron 829 1077 0.97 + . transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS intron 1170 1431 0.55 + . transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS intron 1483 1768 0.55 + . transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS intron 1895 2144 1 + . transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS intron 2299 2458 0.99 + . transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS CDS 601 828 0.88 + 0 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS CDS 1078 1169 0.99 + 0 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS CDS 1432 1482 0.55 + 1 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS CDS 1769 1894 0.99 + 1 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS CDS 2145 2298 0.99 + 1 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS CDS 2459 2653 1 + 0 transcript_id "g68.t1"; gene_id "g68"; scaffold_5_8372148-8375400 AUGUSTUS stop_codon 2651 2653 . + 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MLQLNDTVEPESPGAAILHPAETEDGVEVAFTPPGAGGSLGYGSSVACCSPLQTLTPFHVHNPTMQAKVKDYFVFRPG # TIEQAVSDIRTVALPSEDGEVLSVWLLTEVDHWNNEKERLVLITDRSLLVCKYDFINLLCQQVMRISLNAVDTISVGEFEFPPKSLNKREGYGIRVQW # DKRPRPSFMNRWNPWSTDMPYCTFTEHPMAHADEKVASLCQLDNFRTQLVQAVKKAHKEFPIPGRANGVLILERPLLIETYLGIMSFINNEAKLGYSM # TRGKIGF] # end gene g68 ### # # ----- sequence number 66 (length = 3738, name = scaffold_5_10540307-10544044) ----- # # annotation: # Sequence scaffold_5_10540307-10544044 length=3738 scaffold_5_10540307-10544044 database start_codon 601 603 . + 0 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database intron 700 1014 . + . transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database intron 1126 2534 . + . transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database intron 2580 2675 . + . transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database intron 2761 2944 . + . transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database CDS 601 699 . + 0 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database CDS 1015 1125 . + 0 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database CDS 2535 2579 . + 0 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database CDS 2676 2760 . + 0 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database CDS 2945 3138 . + 2 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; scaffold_5_10540307-10544044 database stop_codon 3136 3138 . + 0 transcript_id "g_2245-T1.1"; gene_id "g_2245-T1"; # Predicted genes for sequence number 66 on both strands # (none) # # ----- sequence number 67 (length = 2702, name = scaffold_5_12660995-12663696) ----- # # annotation: # Sequence scaffold_5_12660995-12663696 length=2702 scaffold_5_12660995-12663696 database start_codon 601 603 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database intron 646 987 . + . transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database intron 1051 1169 . + . transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database intron 1293 1539 . + . transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database intron 1648 1774 . + . transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database intron 1932 2022 . + . transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database CDS 601 645 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database CDS 988 1050 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database CDS 1170 1292 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database CDS 1540 1647 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database CDS 1775 1931 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database CDS 2023 2102 . + 2 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; scaffold_5_12660995-12663696 database stop_codon 2100 2102 . + 0 transcript_id "g_2261-T1.1"; gene_id "g_2261-T1"; # Predicted genes for sequence number 67 on both strands # start gene g69 scaffold_5_12660995-12663696 AUGUSTUS gene 1 2102 0.9 + . g69 scaffold_5_12660995-12663696 AUGUSTUS transcript 1 2102 0.9 + . g69.t1 scaffold_5_12660995-12663696 AUGUSTUS intron 1 242 0.95 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS intron 342 551 1 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS intron 646 987 1 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS intron 1051 1169 1 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS intron 1293 1539 0.95 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS intron 1648 1774 1 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS intron 1932 2022 1 + . transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 243 341 0.95 + 1 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 552 645 1 + 1 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 988 1050 1 + 0 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 1170 1292 1 + 0 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 1540 1647 0.95 + 0 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 1775 1931 1 + 0 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS CDS 2023 2102 1 + 2 transcript_id "g69.t1"; gene_id "g69"; scaffold_5_12660995-12663696 AUGUSTUS stop_codon 2100 2102 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [AALASAHQAQPLPQTLSVLESTPQVRGMHTIIRNKETSRDEFIFYSKRLMRLLIERALSFLPSQIHTVQTPQGEDYEG # KIFHGKRITGVSILRAGETMEPALRAVCKDVRIGKILIQTNQDTGEPELHYLRLPKDISEDHVILMDCTVSTGAAAMMAVRVLLDHDVQEDKILLVSL # LMAEMGVHSVAYAFPQVQIITTAVDKKVNDLFHIIPGIGNFGDRYFGTDAPPDWSDDEMDELSY] # end gene g69 ### # # ----- sequence number 68 (length = 3523, name = scaffold_5_13079528-13083050) ----- # # annotation: # Sequence scaffold_5_13079528-13083050 length=3523 scaffold_5_13079528-13083050 database start_codon 601 603 . + 0 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database intron 633 1139 . + . transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database intron 1199 1876 . + . transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database intron 1987 2077 . + . transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database intron 2181 2365 . + . transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database intron 2515 2659 . + . transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database CDS 601 632 . + 0 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database CDS 1140 1198 . + 1 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database CDS 1877 1986 . + 2 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database CDS 2078 2180 . + 0 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database CDS 2366 2514 . + 2 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database CDS 2660 2923 . + 0 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; scaffold_5_13079528-13083050 database stop_codon 2921 2923 . + 0 transcript_id "g_2272-T1.1"; gene_id "g_2272-T1"; # Predicted genes for sequence number 68 on both strands # start gene g70 scaffold_5_13079528-13083050 AUGUSTUS gene 1 2923 0.36 + . g70 scaffold_5_13079528-13083050 AUGUSTUS transcript 1 2923 0.36 + . g70.t1 scaffold_5_13079528-13083050 AUGUSTUS intron 1 199 0.6 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS intron 386 496 1 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS intron 633 1139 1 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS intron 1199 1876 1 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS intron 1987 2077 1 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS intron 2181 2365 1 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS intron 2515 2659 0.56 + . transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 200 385 0.99 + 2 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 497 632 1 + 2 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 1140 1198 1 + 1 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 1877 1986 1 + 2 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 2078 2180 1 + 0 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 2366 2514 0.6 + 2 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS CDS 2660 2923 0.92 + 0 transcript_id "g70.t1"; gene_id "g70"; scaffold_5_13079528-13083050 AUGUSTUS stop_codon 2921 2923 . + 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [ADAESLSSASTPTSQQGGRNHQGARASKFRHRPGSNSHASAPSSKLATHEGQQGSAAARKIAPNIDRSVKDLQRCTAS # LTRYRVVVKDEMDSSIKTMKQTFAELQSCLMDREVTLLSEMDKVKAEAMAILDGRQKRAEELRRLTDQSASMSEDQLTELRADIKHFVSERKYDEDLG # KAVKFTFELEPLKLSITEFGSVYHPQTGYSNRSRCSSTSSSITGPGAQETLALSQSQSSSSQSHPTHPIKQIFQGNRRQVYHAGPRYNGGAYHDRNPN # RSNYRYQGNRGQGDGAGFAAHTSTTSTTPRVPPHSTTSSYHQESPAHNGLPQRPPRTHIP] # end gene g70 ### # # ----- sequence number 69 (length = 7145, name = scaffold_5_13240707-13247851) ----- # # annotation: # Sequence scaffold_5_13240707-13247851 length=7145 scaffold_5_13240707-13247851 database start_codon 601 603 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 723 1834 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 1987 2114 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 2192 2308 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 2415 2623 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 2731 2872 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 3026 3149 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 3261 3493 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 3583 3754 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 3804 4467 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 4531 4838 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 4881 5171 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 5269 5427 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 5519 5622 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 5730 5997 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 6141 6243 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database intron 6296 6507 . + . transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 601 722 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 1835 1986 . + 1 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 2115 2191 . + 2 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 2309 2414 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 2624 2730 . + 2 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 2873 3025 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 3150 3260 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 3494 3582 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 3755 3803 . + 1 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 4468 4530 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 4839 4880 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 5172 5268 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 5428 5518 . + 2 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 5623 5729 . + 1 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 5998 6140 . + 2 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 6244 6295 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database CDS 6508 6545 . + 2 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; scaffold_5_13240707-13247851 database stop_codon 6543 6545 . + 0 transcript_id "g_2275-T1.1"; gene_id "g_2275-T1"; # Predicted genes for sequence number 69 on both strands # start gene g71 scaffold_5_13240707-13247851 AUGUSTUS gene 601 6753 0.68 + . g71 scaffold_5_13240707-13247851 AUGUSTUS transcript 601 6753 0.68 + . g71.t1 scaffold_5_13240707-13247851 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 723 1834 0.97 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 1987 2114 1 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 2192 2308 0.99 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 2415 2623 0.99 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 2731 2872 1 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 3026 3149 1 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 3261 3493 1 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 3583 3754 0.99 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 3804 5171 0.91 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 5269 5427 1 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 5519 5622 0.99 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 5730 5997 1 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 6141 6243 0.99 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS intron 6296 6592 0.81 + . transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 601 722 1 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 1835 1986 1 + 1 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 2115 2191 0.99 + 2 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 2309 2414 1 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 2624 2730 0.99 + 2 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 2873 3025 1 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 3150 3260 1 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 3494 3582 0.99 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 3755 3803 0.97 + 1 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 5172 5268 0.93 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 5428 5518 1 + 2 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 5623 5729 0.99 + 1 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 5998 6140 0.99 + 2 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 6244 6295 0.96 + 0 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS CDS 6593 6753 0.84 + 2 transcript_id "g71.t1"; gene_id "g71"; scaffold_5_13240707-13247851 AUGUSTUS stop_codon 6751 6753 . + 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MAWALKLPLTDEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESNLPPDSDNKILPFQYVLCAATSPA # VKLHDETLTYLNQGQSYEIRMLDNRKMGELPEITGKMVKSIIRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDLDIPMSVGMVDPRANPTQLNTVEFL # WDPSKRTSVFIQVHCISTEFTMRKHGGEKGVPFRIQIDTFKENEGGEYTEHLHSASCQVKVFKPKGADRKQKTDREKMEKRAPQEKEKYQPSYETTIL # TECSPWPEITYVNNSPSPGFNSTHNSFPVAEGNGSPNHQPEPVVQVADQNLLPTATPQDAQQWLHRNRFSPFCRLFTNFSGADLLKLTREDVIQICGP # ADGIRLFNALKGRVVRPRLTVYVCQESQQAREQQQKHENGDAASNTFFVYHAIYLEELTATELTEKIAQLFNISPRQISQIFKQGPTGIHVLVSDEMI # QNFQDEVCFVLDTMKALPAPPQPQPPDLMFLDCAGHSSLAFPGALSTRQLWERMTEAPHPAQHLIVLL] # end gene g71 ### # # ----- sequence number 70 (length = 6698, name = scaffold_5_16644909-16651606) ----- # # annotation: # Sequence scaffold_5_16644909-16651606 length=6698 scaffold_5_16644909-16651606 database start_codon 601 603 . + 0 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 671 1732 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 1973 2624 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 2825 3357 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 3458 3639 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 3787 3950 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 4227 4350 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 4549 5715 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database intron 5847 5951 . + . transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 601 670 . + 0 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 1733 1972 . + 2 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 2625 2824 . + 2 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 3358 3457 . + 0 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 3640 3786 . + 2 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 3951 4226 . + 2 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 4351 4548 . + 2 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 5716 5846 . + 2 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database CDS 5952 6098 . + 0 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; scaffold_5_16644909-16651606 database stop_codon 6096 6098 . + 0 transcript_id "g_2301-T1.1"; gene_id "g_2301-T1"; # Predicted genes for sequence number 70 on both strands # start gene g72 scaffold_5_16644909-16651606 AUGUSTUS gene 1 6098 0.55 + . g72 scaffold_5_16644909-16651606 AUGUSTUS transcript 1 6098 0.55 + . g72.t1 scaffold_5_16644909-16651606 AUGUSTUS intron 1 600 0.62 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 671 1565 0.95 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 1590 1732 0.87 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 1973 2624 1 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 2825 3357 1 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 3458 3639 1 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 3787 3950 0.99 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 4227 4350 1 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 4549 5715 1 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS intron 5847 5951 1 + . transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 601 670 0.72 + 0 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 1566 1589 0.87 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 1733 1972 0.99 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 2625 2824 1 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 3358 3457 1 + 0 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 3640 3786 1 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 3951 4226 0.99 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 4351 4548 1 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 5716 5846 1 + 2 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS CDS 5952 6098 1 + 0 transcript_id "g72.t1"; gene_id "g72"; scaffold_5_16644909-16651606 AUGUSTUS stop_codon 6096 6098 . + 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MGGAAVLAVLLARLLLWTATAHADKSSVEFLAQDKDEPKLQCTCHNNKGTCPNGTCWGDYCFYIRLHGHEEKGCFMKD # HYLEQCFTSVPGLYVYCCPRSFCNSNSTAPPEPEEEPKTKENSLLVLVVVPVVLLLTVCVCVCGLVVWLRSHRRCQCVGHDDEHNVTMLKTPVGGDPT # YGDIFDEFCTSGSGTGLPYLVQRTMARQISLVECVGKGRYGEVWRGTWTGENVAVKIFSSRDEQSWFRETEIYNTVQLRHNNILGFIASDMTSKNSST # QLWLITHFHELGSLYDFLQYSSLDPEACLRMCLSVACGLVHLHTEILSMQGKPAIAHRDLKSRNILVKRNGQCCIADLGLAVMHSQNSDYLDVGNNPR # VGTKRYMAPEVLDETIRMDIFESYKQTDIWALGLVFWEISRRTLVNGIVEEYRPPFYDMVPSDPSFEEMRKVVCVDQHRPSLHNRLHSHPILTAIVKI # MKECWFQSAAARLTALRVRKSLAKLDPDSDYSTVKLKQDL] # end gene g72 ### # # ----- sequence number 71 (length = 2654, name = scaffold_5_18187857-18190510) ----- # # annotation: # Sequence scaffold_5_18187857-18190510 length=2654 scaffold_5_18187857-18190510 database start_codon 601 603 . + 0 transcript_id "g_2308-T1.1"; gene_id "g_2308-T1"; scaffold_5_18187857-18190510 database intron 1458 1819 . + . transcript_id "g_2308-T1.1"; gene_id "g_2308-T1"; scaffold_5_18187857-18190510 database CDS 601 1457 . + 0 transcript_id "g_2308-T1.1"; gene_id "g_2308-T1"; scaffold_5_18187857-18190510 database CDS 1820 2054 . + 1 transcript_id "g_2308-T1.1"; gene_id "g_2308-T1"; scaffold_5_18187857-18190510 database stop_codon 2052 2054 . + 0 transcript_id "g_2308-T1.1"; gene_id "g_2308-T1"; # Predicted genes for sequence number 71 on both strands # start gene g73 scaffold_5_18187857-18190510 AUGUSTUS gene 601 2054 1 + . g73 scaffold_5_18187857-18190510 AUGUSTUS transcript 601 2054 1 + . g73.t1 scaffold_5_18187857-18190510 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g73.t1"; gene_id "g73"; scaffold_5_18187857-18190510 AUGUSTUS intron 1458 1819 1 + . transcript_id "g73.t1"; gene_id "g73"; scaffold_5_18187857-18190510 AUGUSTUS CDS 601 1457 1 + 0 transcript_id "g73.t1"; gene_id "g73"; scaffold_5_18187857-18190510 AUGUSTUS CDS 1820 2054 1 + 1 transcript_id "g73.t1"; gene_id "g73"; scaffold_5_18187857-18190510 AUGUSTUS stop_codon 2052 2054 . + 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MNRYLPVARQHFLSAIASTSVVVKSISAVVLLLYLLSWAVDTTYALGVTPGYLFPPNFWVWTLVTHGVVEQHAWGVVA # NLGTVMACGRLLEPLWGALELLIFFAVVTVSAGLLAGLTYLLTYVATFDLDFLFAVRVYGAPGFLGGVLVALKQTMGDTTVLRVPQVRMKAAPALVLV # LLAVLALSGLLDSAAPLAAYSYGALAGWVYLRFYQRHSRGRGDMSDHFAFASFFPEAVQPVVGLLAGLVHAALVKLKVCRKMVKRYDVGAPSSITISL # PGTDPQDAERRRQLALKALNERLKKVEDQSAWPSMDDEDDDEEDEVRTDTPLLSGRETASPAGGPGNPPSSTGGQESSIISFEDAPSRS] # end gene g73 ### # # ----- sequence number 72 (length = 6826, name = scaffold_5_18243059-18249884) ----- # # annotation: # Sequence scaffold_5_18243059-18249884 length=6826 scaffold_5_18243059-18249884 database start_codon 601 603 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 713 1272 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 1558 1922 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 2032 2154 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 2240 2387 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 2546 2711 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 2833 2939 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 3030 3165 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 4006 4128 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 4290 4680 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 4763 4894 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 5027 5218 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 5389 5532 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database intron 5627 5872 . + . transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 601 712 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 1273 1557 . + 2 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 1923 2031 . + 2 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 2155 2239 . + 1 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 2388 2545 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 2712 2832 . + 1 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 2940 3029 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 3166 4005 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 4129 4289 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 4681 4762 . + 1 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 4895 5026 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 5219 5388 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 5533 5626 . + 1 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database CDS 5873 6226 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; scaffold_5_18243059-18249884 database stop_codon 6224 6226 . + 0 transcript_id "g_2309-T1.1"; gene_id "g_2309-T1"; # Predicted genes for sequence number 72 on both strands # start gene g74 scaffold_5_18243059-18249884 AUGUSTUS gene 601 6226 0.32 + . g74 scaffold_5_18243059-18249884 AUGUSTUS transcript 601 6226 0.32 + . g74.t1 scaffold_5_18243059-18249884 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 713 1272 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 1558 1922 0.62 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 2032 2154 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 2240 2387 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 2546 2711 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 2833 2999 0.72 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 3030 3165 0.68 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 4006 4128 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 4290 4680 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 4763 4894 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 5027 5218 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 5389 5532 1 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS intron 5627 5872 0.83 + . transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 601 712 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 1273 1557 1 + 2 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 1923 2031 0.62 + 2 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 2155 2239 1 + 1 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 2388 2545 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 2712 2832 0.99 + 1 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 3000 3029 0.56 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 3166 4005 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 4129 4289 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 4681 4762 1 + 1 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 4895 5026 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 5219 5388 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 5533 5626 0.83 + 1 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS CDS 5873 6226 1 + 0 transcript_id "g74.t1"; gene_id "g74"; scaffold_5_18243059-18249884 AUGUSTUS stop_codon 6224 6226 . + 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MAKRKVAAETREKADTKKSKQVPRGKAGGTREVKKDLQNEEAEEVKLKRRAKSNPRNPRPPSNHVTKKTSKYFQRTSP # TKAKDSQDDDDDDDDDDHDNIPGLAKGTAVVLQPVKMEEEEDSEEEEEDWEEVEELSEPLGPSAPSEPALPSQPVEIEIETPDVVHKRLKREKRKAEF # ETYLRRMVNRFNKDVVEDTHKVHLMCLLANGMFRNRLCMEPDLLAITLSLLPVHFTMVTTGRRDQNYLSGLLKWFGATFTLTPELAREERPDPRAMLE # SRLGSLTVRDHQEMTHPLSMKLPATKGKAKSSPPGKGSPVKAPKDSPPSDTKSSPATKRCATGQSSGRGGKKPKNESTAVKEEEEEEEEKKKERTTIG # GGQKPKNSTRRSVASKVSYKEQSSEGEGPSEGEEFQLTSEGESEDSEGGAFQGKRGKGKGKTPARRKSGGKRNTKKEQGYEDCKEEEEEEEEEGAGKA # KGAKQNRRKNKGPGADEWLEVYLDKLGSWLCVDVCQGVGQPQLCSQNATQPLTYVVAVDDSGDLKDLSRKYDPNWMTLSRKRRVDEEWWEETLEPFLG # EETERDLQEDKELQARLLDRPLPTSVAEFKNHPLYALERHLLKYEALYPPTASILGYCRGEPVYSRDCIHTLHSRDTWLKEARTVRLGEEPYKMVRGF # SNRSRKARMMSEEKDKNDLPLFGDWQTEEYQPPIAVDGRVPRNDYGNVYLFKPCMLPVGCVHLRLPNLHRVAKKLDMDCASAITGFDFHGGYSHAVTD # GYIVCEEHEEILRAAWVEDQEIQKQKEKEKREKRAVSNWTLLAKGLLIKERLRRRYGHQGPKDGGGLGQANAQDREGEAGLSSDEEEDGGAASAPAGQ # TAAVTLAQSWPQNRQEEQDKGSASGAKKRNTKREKRGQQKHMFPFEKV] # end gene g74 ### # # ----- sequence number 73 (length = 10831, name = scaffold_5_18992352-19003182) ----- # # annotation: # Sequence scaffold_5_18992352-19003182 length=10831 scaffold_5_18992352-19003182 database start_codon 601 603 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 693 1038 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 1217 1637 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 1751 1994 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 2014 2131 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 2249 2666 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 2744 2907 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 3069 3397 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 3619 4268 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 4366 4480 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 4570 5189 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 5453 5957 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 6091 6777 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 6982 7652 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 7796 8273 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 8414 8494 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 8596 8818 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 8897 9023 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 9108 9216 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 9277 9524 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database intron 9631 10109 . + . transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 601 692 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 1039 1216 . + 1 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 1638 1750 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 1995 2013 . + 1 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 2132 2248 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 2667 2743 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 2908 3068 . + 1 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 3398 3618 . + 2 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 4269 4365 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 4481 4569 . + 2 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 5190 5452 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 5958 6090 . + 1 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 6778 6981 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 7653 7795 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 8274 8413 . + 1 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 8495 8595 . + 2 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 8819 8896 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 9024 9107 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 9217 9276 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 9525 9630 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database CDS 10110 10231 . + 2 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; scaffold_5_18992352-19003182 database stop_codon 10229 10231 . + 0 transcript_id "g_2317-T1.1"; gene_id "g_2317-T1"; # Predicted genes for sequence number 73 on both strands # start gene g75 scaffold_5_18992352-19003182 AUGUSTUS gene 1 10231 0.21 + . g75 scaffold_5_18992352-19003182 AUGUSTUS transcript 1 10231 0.21 + . g75.t1 scaffold_5_18992352-19003182 AUGUSTUS intron 156 421 0.87 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 693 1038 0.96 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 1217 1637 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 1751 2139 0.44 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 2249 2666 0.97 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 2744 2907 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 3069 3397 0.86 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 3619 4268 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 4366 4480 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 4570 5189 0.99 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 5453 5957 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 6091 6777 0.92 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 6982 7652 0.86 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 7796 8273 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 8414 8494 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 8596 8818 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 8897 9023 0.99 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 9108 9216 0.99 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 9277 9524 0.99 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS intron 9631 10109 1 + . transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 1 155 0.81 + 1 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 422 692 1 + 2 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 1039 1216 0.96 + 1 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 1638 1750 1 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 2140 2248 0.44 + 1 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 2667 2743 0.99 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 2908 3068 0.86 + 1 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 3398 3618 1 + 2 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 4269 4365 1 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 4481 4569 0.99 + 2 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 5190 5452 0.99 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 5958 6090 0.92 + 1 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 6778 6981 0.94 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 7653 7795 0.92 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 8274 8413 1 + 1 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 8495 8595 1 + 2 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 8819 8896 1 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 9024 9107 0.99 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 9217 9276 0.99 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 9525 9630 1 + 0 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS CDS 10110 10231 1 + 2 transcript_id "g75.t1"; gene_id "g75"; scaffold_5_18992352-19003182 AUGUSTUS stop_codon 10229 10231 . + 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [NPADEDCRGRPPIPLKKPPLPCSSSSQGRPRRRAGRPRKFSLIEEGYSTRGXTTSESPAKRPKTSAVSEPSSPEEASS # SGMGSRPAPPTGGDEIEVGISQSDSENKDPSSNMPAEEEFFPRKRGRPSKRFLRKKYKKYMNRNRYCKSLKPLVRPHNCWICGSRFMSQDDLRFHVES # HEGNDPERFKCLQCNYRCKRWSSLKEHMFNHEGNKPFKCEECDYSSVYRKDVIRHSATHNKDKVSQFACPVCHRVYPMQKRLTQHMKTHSTEKPHMCD # KCGKSFKKRYTFKVHLLTHIQTLGDSSFKCEFCDYTCDNKKLLLNHQLSHTNDKPFKCDYCKYSTSKEDFLVSHLAIKHTGEKPFSCDMCHFMTRHRK # NLRLHVQCRHAEAFEEWSASHPEEPVRRRRRPFFTLQQIEELKQQHDNTQGLHNAIVVDPVTLQAMQGMDNASVTQDALGNTTIIYEQAESTDLSAQN # ALDLLLNMSNARELVGNSLQVAVLKSDGRALQAGSWTGLASAPGQPQKVVTFHVSENGETMVQEAYEAASTETGELAQIAIEAYEGTEDFSVVEQAAE # EIHSVGPGYSVESSLPASQALENSGVSGSDNHKGHSDKYYLTSGLGDGELQQVELSSEPPGSPCTLGSPQQSLNPKRFSCRICMESFHGRSDMENHKR # AHLDPGNFKCPDCDFTASSWPEVKTHMGLHAYLRPHKCPSCSFASKNKKDLRRHMMTHTNEKPFSCELCGQRFNRNGHLKFHMERLHSQDPPTRKSRS # CTPQHTIIVNSDEEALATLQSLQANQAVIGPERLQQALGQEHIIVAQDQSLSDQEEGSYIQQITTVDGQTVQHLMTGDNQVQYIISQDGVQHLIPQEY # VVVADGNHIQMPDGQIIQYEHDGTFLQEQQIALSHDGQIRYLPISSEQQIVSSEDLEAAAHSAVSAVADAAMSQTQTVYTEATPEQLQQLQQQGIQYD # VIHFTDE] # end gene g75 ### # # ----- sequence number 74 (length = 4903, name = scaffold_6_1514209-1519111) ----- # # annotation: # Sequence scaffold_6_1514209-1519111 length=4903 scaffold_6_1514209-1519111 database start_codon 601 603 . + 0 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database intron 788 2283 . + . transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database intron 2371 3652 . + . transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database intron 3730 3851 . + . transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database intron 3916 4103 . + . transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database CDS 601 787 . + 0 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database CDS 2284 2370 . + 2 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database CDS 3653 3729 . + 2 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database CDS 3852 3915 . + 0 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database CDS 4104 4303 . + 2 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; scaffold_6_1514209-1519111 database stop_codon 4301 4303 . + 0 transcript_id "g_2327-T1.1"; gene_id "g_2327-T1"; # Predicted genes for sequence number 74 on both strands # start gene g76 scaffold_6_1514209-1519111 AUGUSTUS gene 601 4303 0.5 + . g76 scaffold_6_1514209-1519111 AUGUSTUS transcript 601 4303 0.5 + . g76.t1 scaffold_6_1514209-1519111 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS intron 788 2283 0.54 + . transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS intron 2371 3652 0.97 + . transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS intron 3730 3851 1 + . transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS intron 3916 4103 1 + . transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS CDS 601 787 0.97 + 0 transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS CDS 2284 2370 1 + 2 transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS CDS 3653 3729 1 + 2 transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS CDS 3852 3915 1 + 0 transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS CDS 4104 4303 1 + 2 transcript_id "g76.t1"; gene_id "g76"; scaffold_6_1514209-1519111 AUGUSTUS stop_codon 4301 4303 . + 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MAEQEPTPEQLAALAAANEEEGGVNYKPPAQKTLAEIQELDKDDESLRKYKEALLGNAQASAVDPNAPNVQVTRLTLM # CDTAPNPLTLDLQGDLEAFKKQSFVLKEGVEYKIKISFKVNKEIVSGLKYVQHTFRKGVRIDKSDYMVGSYGPRPTEYDFLTPLEEAPKGMLARGTYN # IKSKFTDDDKHDHLSWEWNLNIKKEWKD] # end gene g76 ### # # ----- sequence number 75 (length = 6972, name = scaffold_6_3027843-3034814) ----- # # annotation: # Sequence scaffold_6_3027843-3034814 length=6972 scaffold_6_3027843-3034814 database start_codon 601 603 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 613 835 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 894 2183 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 2213 3605 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 3709 4044 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 4167 4556 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 4666 4780 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 4905 5028 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 5201 5298 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 5404 5653 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 5908 6021 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database intron 6065 6216 . + . transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 601 612 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 836 893 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 2184 2212 . + 2 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 3606 3708 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 4045 4166 . + 2 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 4557 4665 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 4781 4904 . + 2 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 5029 5200 . + 1 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 5299 5403 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 5654 5907 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 6022 6064 . + 1 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database CDS 6217 6372 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; scaffold_6_3027843-3034814 database stop_codon 6370 6372 . + 0 transcript_id "g_2337-T1.1"; gene_id "g_2337-T1"; # Predicted genes for sequence number 75 on both strands # start gene g77 scaffold_6_3027843-3034814 AUGUSTUS gene 806 6372 0.43 + . g77 scaffold_6_3027843-3034814 AUGUSTUS transcript 806 6372 0.43 + . g77.t1 scaffold_6_3027843-3034814 AUGUSTUS start_codon 806 808 . + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 894 2183 0.92 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 2213 3605 0.93 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 3709 4044 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 4167 4556 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 4666 4780 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 4905 5028 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 5201 5298 0.99 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 5404 5653 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 5908 6021 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS intron 6065 6216 1 + . transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 806 893 0.44 + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 2184 2212 0.93 + 2 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 3606 3708 1 + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 4045 4166 1 + 2 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 4557 4665 1 + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 4781 4904 1 + 2 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 5029 5200 1 + 1 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 5299 5403 0.99 + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 5654 5907 1 + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 6022 6064 1 + 1 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS CDS 6217 6372 1 + 0 transcript_id "g77.t1"; gene_id "g77"; scaffold_6_3027843-3034814 AUGUSTUS stop_codon 6370 6372 . + 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MVCTSFSPCQRWVSEKLSVESLRDLELFGEQSQRTSHRNAHEDSQESLTSLSRRGTMGSFLPDSSAYELLTVIGRGLE # DLMTVNLARYTPTGEHVAVRRIDLESCTNDMVAYLQGELHVSKLFHHSSILPYRSIFIADNELWVITPFMAFGSARDLISTHFADGMSELAIAYILLG # MLRALEYIHHMGYVHRSVKASHVLISADGQVCMSGLRSIFSLIRHGQRARVVHDFPQYSVKVLPWLSPEVLQQNLQGYDFRSDIYSLGITACELANGH # VPFKDMPATQMLLEKLNGTVPCLLDTTTIPPEELTMKPSRSGADSGICEGPGAGGARHSNGEPSSSSVNHPYSRTFSPHFHAFVELCLQRDPEKRPSA # TTLIGHSFFKQIKRRPSEALPELFRPVSPITSFESGQPQDSPPGLASLESGLSYLDVEDWDF] # end gene g77 ### # # ----- sequence number 76 (length = 3000, name = scaffold_6_8058376-8061375) ----- # # annotation: # Sequence scaffold_6_8058376-8061375 length=3000 scaffold_6_8058376-8061375 database start_codon 601 603 . + 0 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database intron 660 1426 . + . transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database intron 1620 1708 . + . transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database intron 1781 1896 . + . transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database intron 2035 2283 . + . transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database CDS 601 659 . + 0 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database CDS 1427 1619 . + 1 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database CDS 1709 1780 . + 0 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database CDS 1897 2034 . + 0 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database CDS 2284 2400 . + 0 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; scaffold_6_8058376-8061375 database stop_codon 2398 2400 . + 0 transcript_id "g_2372-T1.1"; gene_id "g_2372-T1"; # Predicted genes for sequence number 76 on both strands # start gene g78 scaffold_6_8058376-8061375 AUGUSTUS gene 601 2400 0.62 + . g78 scaffold_6_8058376-8061375 AUGUSTUS transcript 601 2400 0.62 + . g78.t1 scaffold_6_8058376-8061375 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS intron 660 1426 0.62 + . transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS intron 1620 1708 1 + . transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS intron 1781 1896 1 + . transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS intron 2035 2283 1 + . transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS CDS 601 659 0.62 + 0 transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS CDS 1427 1619 0.93 + 1 transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS CDS 1709 1780 1 + 0 transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS CDS 1897 2034 1 + 0 transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS CDS 2284 2400 1 + 0 transcript_id "g78.t1"; gene_id "g78"; scaffold_6_8058376-8061375 AUGUSTUS stop_codon 2398 2400 . + 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [MYCARHCIRTALRIAVKTHRQELQIPAVCALRTLKTSTADRSDVIASPALDGAPKQYSPKIQQLVTDIASLTLLEVSD # LNELLKKTLNIQDVGMMPMGAMAAAAPIAQAVEEEAAPVKKEKTHFTVKLTELTATEKVKLIKEVKNSMQGLNLVQAKKLVESLPQEIRVNVSKEEAE # KLKAALEAAGGTVVLE] # end gene g78 ### # # ----- sequence number 77 (length = 2846, name = scaffold_6_8176565-8179410) ----- # # annotation: # Sequence scaffold_6_8176565-8179410 length=2846 scaffold_6_8176565-8179410 database start_codon 601 603 . + 0 transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; scaffold_6_8176565-8179410 database intron 812 1264 . + . transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; scaffold_6_8176565-8179410 database intron 1858 2015 . + . transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; scaffold_6_8176565-8179410 database CDS 601 811 . + 0 transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; scaffold_6_8176565-8179410 database CDS 1265 1857 . + 2 transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; scaffold_6_8176565-8179410 database CDS 2016 2246 . + 0 transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; scaffold_6_8176565-8179410 database stop_codon 2244 2246 . + 0 transcript_id "g_2375-T1.1"; gene_id "g_2375-T1"; # Predicted genes for sequence number 77 on both strands # start gene g79 scaffold_6_8176565-8179410 AUGUSTUS gene 601 2246 0.98 + . g79 scaffold_6_8176565-8179410 AUGUSTUS transcript 601 2246 0.98 + . g79.t1 scaffold_6_8176565-8179410 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g79.t1"; gene_id "g79"; scaffold_6_8176565-8179410 AUGUSTUS intron 812 1264 1 + . transcript_id "g79.t1"; gene_id "g79"; scaffold_6_8176565-8179410 AUGUSTUS intron 1858 2015 1 + . transcript_id "g79.t1"; gene_id "g79"; scaffold_6_8176565-8179410 AUGUSTUS CDS 601 811 0.99 + 0 transcript_id "g79.t1"; gene_id "g79"; scaffold_6_8176565-8179410 AUGUSTUS CDS 1265 1857 1 + 2 transcript_id "g79.t1"; gene_id "g79"; scaffold_6_8176565-8179410 AUGUSTUS CDS 2016 2246 0.99 + 0 transcript_id "g79.t1"; gene_id "g79"; scaffold_6_8176565-8179410 AUGUSTUS stop_codon 2244 2246 . + 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MGKDYYKVLGIQKGASEDEIKKAYRKQALRFHPDKNKSAGAEDKFKEIAEAYDVLSDSKKKEIFDKYGEEGLKGPTGG # SSGPNCQNFNYTFHGDPHAMFAEFFGGRSPFEQFFPRNGDDDMDIDDPFAAFGMGGMGGMGGMGGGFQRSFKSRPGGSCGGREKKKDPPVVHDLKVSL # EEVFSGCTKKMKISRKRLNPDGCSMRSEDKILTVDIKRGWKEGTKITFPREGDETPANIPADVVFVVKDKPHPVFRREGSDVIFSAKISLREALCGCT # VNAPTLDGRTLTVTSRDVVKPGMKKRIVGEGLPLSKCPEKRGDMVLEFVVKFPEKLGQNARDALSQILPP] # end gene g79 ### # # ----- sequence number 78 (length = 3054, name = scaffold_6_8579947-8583000) ----- # # annotation: # Sequence scaffold_6_8579947-8583000 length=3054 scaffold_6_8579947-8583000 database start_codon 601 603 . + 0 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database intron 786 895 . + . transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database intron 1017 1139 . + . transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database intron 1170 1620 . + . transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database intron 1668 1750 . + . transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database intron 1834 1918 . + . transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database intron 2304 2408 . + . transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 601 785 . + 0 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 896 1016 . + 1 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 1140 1169 . + 0 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 1621 1667 . + 0 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 1751 1833 . + 1 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 1919 2303 . + 2 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database CDS 2409 2454 . + 1 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; scaffold_6_8579947-8583000 database stop_codon 2452 2454 . + 0 transcript_id "g_2380-T1.1"; gene_id "g_2380-T1"; # Predicted genes for sequence number 78 on both strands # start gene g80 scaffold_6_8579947-8583000 AUGUSTUS gene 1903 3054 0.4 + . g80 scaffold_6_8579947-8583000 AUGUSTUS transcript 1903 3054 0.4 + . g80.t1 scaffold_6_8579947-8583000 AUGUSTUS start_codon 1903 1905 . + 0 transcript_id "g80.t1"; gene_id "g80"; scaffold_6_8579947-8583000 AUGUSTUS intron 2123 3054 0.49 + . transcript_id "g80.t1"; gene_id "g80"; scaffold_6_8579947-8583000 AUGUSTUS CDS 1903 2122 0.84 + 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MCFSAGASEDVLQAITGQLLDTWPDQSAEAQERGVALGHLTRVGLTRVDARDVVEKLCLESLGSVSEFSPPIE] # end gene g80 ### # # ----- sequence number 79 (length = 6619, name = scaffold_6_9074573-9081191) ----- # # annotation: # Sequence scaffold_6_9074573-9081191 length=6619 scaffold_6_9074573-9081191 database start_codon 601 603 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 638 976 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 2351 2507 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 2721 2820 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 2933 3020 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 3720 3818 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 3907 4043 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 4264 4462 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 4606 5163 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 5365 5651 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database intron 5751 5962 . + . transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 601 637 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 977 2350 . + 2 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 2508 2720 . + 2 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 2821 2932 . + 2 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 3021 3719 . + 1 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 3819 3906 . + 1 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 4044 4263 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 4463 4605 . + 2 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 5164 5364 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 5652 5750 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database CDS 5963 6019 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; scaffold_6_9074573-9081191 database stop_codon 6017 6019 . + 0 transcript_id "g_2389-T1.1"; gene_id "g_2389-T1"; # Predicted genes for sequence number 79 on both strands # start gene g81 scaffold_6_9074573-9081191 AUGUSTUS gene 601 6019 0.43 + . g81 scaffold_6_9074573-9081191 AUGUSTUS transcript 601 6019 0.43 + . g81.t1 scaffold_6_9074573-9081191 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 638 976 1 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 2351 2507 0.98 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 2721 2820 0.99 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 2933 3020 0.9 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 3720 3818 1 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 3907 4043 1 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 4264 4462 1 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 4606 5163 1 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 5365 5651 0.63 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS intron 5751 5962 0.78 + . transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 601 637 0.98 + 0 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 977 2350 0.98 + 2 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 2508 2720 0.99 + 2 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 2821 2932 0.9 + 2 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 3021 3719 1 + 1 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 3819 3906 1 + 1 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 4044 4263 1 + 0 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 4463 4605 1 + 2 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 5164 5364 0.63 + 0 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 5652 5750 0.95 + 0 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS CDS 5963 6019 0.78 + 0 transcript_id "g81.t1"; gene_id "g81"; scaffold_6_9074573-9081191 AUGUSTUS stop_codon 6017 6019 . + 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MAQVLHMDPSFPGKLNPPAPPSLHGKEQEAPYSVETPYGYRLDLDFLKYVNDIEKGNTIKRVPMQRRPRYGSLPRGYG # YTGSWWTSTESLCSNTSMDSRHSSFSYCAPGFHTSQRPSFSTARVEKTLLDARRKLEEEKESRRFSNLGSMHSSVAGSTTSLSSAHSFNRAQGGSFTP # ISSGLSTPVSPTPAHLQHVREQMAVALRKIRELEEQVKTIPVLQVKISVLQEEKRQLSVQLKSQKFLGHTLGFGRGRPRGELYIDIPEEEVGAGAGRT # SVPAGVQSPTSTDNIKQDSGCEIEDTVIVGGVRPAGKREVRSVGVGPEEERGNCQVGVGVQEQDLGLLPETQALRNQVGQLEGQLKRTMDDLQVAQQQ # VEKAQRERQGQAHAPQADHFVRATSLGWQEQQGLQTVVSFTQQPQHRQQRTVGIQVYTLEQPTVVGVGTLLRAEGCSSIAIQPGGAIQGGHAQALGSE # EPPVELPIAISSRQVRDILRSEVSTSVPVKNPAVTMEIIDKQMASFNLKEGEAHQHTVVEAVQSQEDLSKSASASPQSALRSIMKRKAEVESGSPSTK # KNLQFIGVNGGYESTSSEDSSSESSEEESDSSEYHEAKDKLPDTPAQLNQPTGVSASPRPPATDLTPLQTTTQPPASQPATELSTHLSAVTNTGLQHQ # PTQSPAMDTVVEQYTSLQPAFDSTLTFQSSVSDCAPQESINQLQASTAPPEGTSETSSTEPAPARGSLISPPTCSTPQQNTTRSETTEVTQQQEAHMT # NLAPQHGANQSTASEQSSQQCTIQASPASKPAPDSSPCNSVSANQDGRLTLGDSLMAALYALQKALGEPNAFSQQEARTAYTTVLQEWLRVSCHKAAD # MAVVRAHMDTFASISPQLLEFVVNMADGNGNTALHYTVSHSNFPVVKLLLDTGLCNADKQNKAGYTAIMLTALAAFHSDSDLHTVLQLLRTGDVNAKA # SQAGQTALMLAVSHGRGDMVRALISCGAQVNIRDDDGSTALMCACEHGHVDIVRQLLSVPGCDATLTDNDGSTALSIALEASQNDIAVLLYAHLNFAK # PPSPVSPKSPILGSSPPSGEAK] # end gene g81 ### # # ----- sequence number 80 (length = 4131, name = scaffold_6_10546446-10550576) ----- # # annotation: # Sequence scaffold_6_10546446-10550576 length=4131 scaffold_6_10546446-10550576 database start_codon 601 603 . + 0 transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; scaffold_6_10546446-10550576 database intron 767 1608 . + . transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; scaffold_6_10546446-10550576 database intron 1724 3398 . + . transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; scaffold_6_10546446-10550576 database CDS 601 766 . + 0 transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; scaffold_6_10546446-10550576 database CDS 1609 1723 . + 2 transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; scaffold_6_10546446-10550576 database CDS 3399 3531 . + 1 transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; scaffold_6_10546446-10550576 database stop_codon 3529 3531 . + 0 transcript_id "g_2405-T1.1"; gene_id "g_2405-T1"; # Predicted genes for sequence number 80 on both strands # start gene g82 scaffold_6_10546446-10550576 AUGUSTUS gene 601 3531 0.2 + . g82 scaffold_6_10546446-10550576 AUGUSTUS transcript 601 3531 0.2 + . g82.t1 scaffold_6_10546446-10550576 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g82.t1"; gene_id "g82"; scaffold_6_10546446-10550576 AUGUSTUS intron 761 1608 0.3 + . transcript_id "g82.t1"; gene_id "g82"; scaffold_6_10546446-10550576 AUGUSTUS intron 1724 3398 0.7 + . transcript_id "g82.t1"; gene_id "g82"; scaffold_6_10546446-10550576 AUGUSTUS CDS 601 760 0.31 + 0 transcript_id "g82.t1"; gene_id "g82"; scaffold_6_10546446-10550576 AUGUSTUS CDS 1609 1723 0.95 + 2 transcript_id "g82.t1"; gene_id "g82"; scaffold_6_10546446-10550576 AUGUSTUS CDS 3399 3531 1 + 1 transcript_id "g82.t1"; gene_id "g82"; scaffold_6_10546446-10550576 AUGUSTUS stop_codon 3529 3531 . + 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MDNKPLLPDRPPAYNAVPGTYEYGQQHNYGAITPPAPATPGFQQPPPPYPYPDEYPPGPAQMGPAIAQQPYPGTYTII # QPSVVVVGGCPACRVGVLEDDFTCLGILCAIFFFPLGILFCLALRQRRCPNCGATFG] # end gene g82 ### # # ----- sequence number 81 (length = 3718, name = scaffold_6_10947998-10951715) ----- # # annotation: # Sequence scaffold_6_10947998-10951715 length=3718 scaffold_6_10947998-10951715 database start_codon 601 603 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 674 1208 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 1388 1492 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 1558 1743 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 1862 1988 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 2098 2338 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 2443 2536 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 2639 2744 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database intron 2825 3018 . + . transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 601 673 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 1209 1387 . + 2 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 1493 1557 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 1744 1861 . + 1 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 1989 2097 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 2339 2442 . + 2 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 2537 2638 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 2745 2824 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database CDS 3019 3118 . + 1 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; scaffold_6_10947998-10951715 database stop_codon 3116 3118 . + 0 transcript_id "g_2408-T1.1"; gene_id "g_2408-T1"; # Predicted genes for sequence number 81 on both strands # start gene g83 scaffold_6_10947998-10951715 AUGUSTUS gene 390 3118 0.31 + . g83 scaffold_6_10947998-10951715 AUGUSTUS transcript 390 3118 0.31 + . g83.t1 scaffold_6_10947998-10951715 AUGUSTUS start_codon 390 392 . + 0 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 433 1208 0.33 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 1388 1492 1 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 1558 1743 1 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 1862 1988 0.98 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 2098 2338 1 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 2443 2536 1 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 2639 2744 1 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS intron 2825 3018 0.99 + . transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 390 432 0.41 + 0 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 1209 1387 0.48 + 2 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 1493 1557 1 + 0 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 1744 1861 1 + 1 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 1989 2097 0.98 + 0 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 2339 2442 1 + 2 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 2537 2638 1 + 0 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 2745 2824 1 + 0 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS CDS 3019 3118 0.99 + 1 transcript_id "g83.t1"; gene_id "g83"; scaffold_6_10947998-10951715 AUGUSTUS stop_codon 3116 3118 . + 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MRKARIASITGIEKAPLRVHAALLHTPVIRKSLLVEQSNMKIELLPALTDNYMYLLIDEETKEAAIVDPVEPIKVLEA # VKKHKVKLTTVLTTHHHWDHAGGNEKMLRLMPGLTVYGGDDRVDALSKKVSHSNTLKLGSLSVKCLFTPCHTTGHICYYVTKNNSTEPPAVFTGDTLF # VAGCGKFFEGTAEQMYRALVDILGRLPPETRVYCGHEYTVNNLKFARHVEPDNEVILKKLAWAKEKFSNGEPTIPSTVADEFLFNPFMRVKEKAVQDH # TGQSDPIETMRSLRKEKDGFKVPKE] # end gene g83 ### # # ----- sequence number 82 (length = 7416, name = scaffold_6_11731504-11738919) ----- # # annotation: # Sequence scaffold_6_11731504-11738919 length=7416 scaffold_6_11731504-11738919 database start_codon 601 603 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 700 1406 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 1474 1620 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 1661 1787 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 1933 2019 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 2095 2275 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 2381 2777 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 2940 3715 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 4075 5416 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database intron 5614 6778 . + . transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 601 699 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 1407 1473 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 1621 1660 . + 2 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 1788 1932 . + 1 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 2020 2094 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 2276 2380 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 2778 2939 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 3716 4074 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 5417 5613 . + 1 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database CDS 6779 6816 . + 2 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; scaffold_6_11731504-11738919 database stop_codon 6814 6816 . + 0 transcript_id "g_2413-T1.1"; gene_id "g_2413-T1"; # Predicted genes for sequence number 82 on both strands # start gene g84 scaffold_6_11731504-11738919 AUGUSTUS gene 601 5938 0.03 + . g84 scaffold_6_11731504-11738919 AUGUSTUS transcript 601 5938 0.03 + . g84.t1 scaffold_6_11731504-11738919 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 700 1406 0.45 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 1478 1787 0.23 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 1933 2019 0.99 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 2095 2275 1 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 2381 2777 1 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 2940 3715 1 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 4075 4624 0.71 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 4727 5416 0.7 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS intron 5614 5933 0.31 + . transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 601 699 0.42 + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 1407 1477 0.22 + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 1788 1932 0.98 + 1 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 2020 2094 1 + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 2276 2380 1 + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 2778 2939 1 + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 3716 4074 1 + 0 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 4625 4726 0.7 + 1 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 5417 5613 1 + 1 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS CDS 5934 5938 0.31 + 2 transcript_id "g84.t1"; gene_id "g84"; scaffold_6_11731504-11738919 AUGUSTUS stop_codon 5936 5938 . + 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MLSAAQLLDELMGRDRNLAPDEKRCNVRWDHETVCRYYLCGFCPAELFTNTRSDLGKYEKSSRFMKEGYERDFLRYLQ # SLLAEVERRIRRGHARLALSQAQQNAGGPGPSGKNEEKALVLTEKIEDLVMQIEELGSEGKVEEAQGMMKLVEQLKEERELLSSTPSTIESFAAQEKQ # MEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKSTVEELKEKLRRRSEDPVGEDKGKKEKEDREREREEREKVRKEEEEKEREKEREKEREKERE # RERERERERDRDRERERERRGRRSHSNSRHSSRTSDRKRSRSRERRRSRSKEREREKDRGRKCTSLMACSPQAIRVNSWCEGWVGSVVTVKAHLWQQD # RSRDRERDRDRDRSRRGGSRERFDRKRRSRSCERKRSRSLERKTYQRSSQRSRSRDRDKERSSRDKA] # end gene g84 ### # # ----- sequence number 83 (length = 7203, name = scaffold_6_13187803-13195005) ----- # # annotation: # Sequence scaffold_6_13187803-13195005 length=7203 scaffold_6_13187803-13195005 database start_codon 601 603 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 618 1128 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 1201 2226 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 2324 2755 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 2824 3070 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 3141 3569 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 3642 3892 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 4037 5000 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 5091 5287 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database intron 5426 5844 . + . transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 601 617 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 1129 1200 . + 1 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 2227 2323 . + 1 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 2756 2823 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 3071 3140 . + 1 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 3570 3641 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 3893 4036 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 5001 5090 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 5288 5425 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database CDS 5845 6603 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; scaffold_6_13187803-13195005 database stop_codon 6601 6603 . + 0 transcript_id "g_2419-T1.1"; gene_id "g_2419-T1"; # Predicted genes for sequence number 83 on both strands # start gene g85 scaffold_6_13187803-13195005 AUGUSTUS gene 3416 6568 0.08 + . g85 scaffold_6_13187803-13195005 AUGUSTUS transcript 3416 6568 0.08 + . g85.t1 scaffold_6_13187803-13195005 AUGUSTUS start_codon 3416 3418 . + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS intron 3452 3569 0.19 + . transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS intron 3642 3892 0.67 + . transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS intron 4037 5000 0.46 + . transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS intron 5091 5287 0.45 + . transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS intron 5426 6310 0.76 + . transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS CDS 3416 3451 0.21 + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS CDS 3570 3641 0.66 + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS CDS 3893 4036 0.71 + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS CDS 5001 5090 0.46 + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS CDS 5288 5425 0.7 + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS CDS 6311 6568 0.76 + 0 transcript_id "g85.t1"; gene_id "g85"; scaffold_6_13187803-13195005 AUGUSTUS stop_codon 6566 6568 . + 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MTGLLFCNTAGFKAKEILTASNIPHGNCVICLYGFKEGEAFTKTSCYHYFHSYCLGRYITYSENELREREKELEEDKS # REKLEEELTVVCPVCREPFTYDVDQLLMSPAPCFPKMEGAMLGVEFRKKWQEYQVLLERQKAKGGIIDPEAESNRFLIHINEMIAKEVLKTLRGEVVI # VGRDGGLVWVNSLANGKRGVLEELTNGIPLRACTTMPGLGEGRGVGAESTVLVEKAELGEETRESSIRK] # end gene g85 ### # # ----- sequence number 84 (length = 7909, name = scaffold_6_13272714-13280622) ----- # # annotation: # Sequence scaffold_6_13272714-13280622 length=7909 scaffold_6_13272714-13280622 database start_codon 332 334 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 347 640 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 733 820 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 886 1273 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 1378 1534 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 1573 2545 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 2595 2691 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 2764 2883 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 2987 3108 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 3159 4210 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 4274 4571 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 4683 4836 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database intron 4966 7228 . + . transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 332 346 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 641 732 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 821 885 . + 1 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 1274 1377 . + 2 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 1535 1572 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 2546 2594 . + 1 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 2692 2763 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 2884 2986 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 3109 3158 . + 2 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 4211 4273 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 4572 4682 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 4837 4965 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database CDS 7229 7309 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; scaffold_6_13272714-13280622 database stop_codon 7307 7309 . + 0 transcript_id "g_2423-T1.1"; gene_id "g_2423-T1"; # Predicted genes for sequence number 84 on both strands # start gene g86 scaffold_6_13272714-13280622 AUGUSTUS gene 650 5423 0.02 + . g86 scaffold_6_13272714-13280622 AUGUSTUS transcript 650 5423 0.02 + . g86.t1 scaffold_6_13272714-13280622 AUGUSTUS start_codon 650 652 . + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 733 820 0.61 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 886 1273 1 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 1378 1681 0.62 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 1759 2545 0.63 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 2595 4210 0.31 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 4274 4571 0.75 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 4683 4836 0.7 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS intron 4966 5411 0.41 + . transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 650 732 0.61 + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 821 885 0.65 + 1 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 1274 1377 1 + 2 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 1682 1758 0.62 + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 2546 2594 0.66 + 1 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 4211 4273 0.79 + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 4572 4682 0.7 + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 4837 4965 0.85 + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS CDS 5412 5423 0.41 + 0 transcript_id "g86.t1"; gene_id "g86"; scaffold_6_13272714-13280622 AUGUSTUS stop_codon 5421 5423 . + 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MSVFSQSYSPCGRFLGVGNNYGEIAVFSLSSALSSDATDLSKKPILTFTAHDGPIFSLISTDSHLLSTGNGEISAWSW # VELIKRIRFNTGIIPQCTDHVQNWDFISTAHRSSLEIPEINAMLINPKTCARPQYGKWICCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFPLTGCQR # HATFYQDMILSVGEGQCVSHCLLGGEVKAQIPCTPHSLNTLAFNRNSTEHRLVG] # end gene g86 ### # # ----- sequence number 85 (length = 7390, name = scaffold_6_13934146-13941535) ----- # # annotation: # Sequence scaffold_6_13934146-13941535 length=7390 scaffold_6_13934146-13941535 database start_codon 601 603 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 641 787 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 941 2177 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 2393 3505 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 3607 3833 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 4016 4164 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 4251 4491 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 4662 4991 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 5098 5244 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 5354 5704 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 5851 5946 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database intron 6117 6609 . + . transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 601 640 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 788 940 . + 2 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 2178 2392 . + 2 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 3506 3606 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 3834 4015 . + 1 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 4165 4250 . + 2 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 4492 4661 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 4992 5097 . + 1 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 5245 5353 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 5705 5850 . + 2 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 5947 6116 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database CDS 6610 6790 . + 1 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; scaffold_6_13934146-13941535 database stop_codon 6788 6790 . + 0 transcript_id "g_2427-T1.1"; gene_id "g_2427-T1"; # Predicted genes for sequence number 85 on both strands # start gene g87 scaffold_6_13934146-13941535 AUGUSTUS gene 1 6790 0.54 + . g87 scaffold_6_13934146-13941535 AUGUSTUS transcript 1 6790 0.54 + . g87.t1 scaffold_6_13934146-13941535 AUGUSTUS intron 1 540 0.82 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 641 787 0.94 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 941 2177 0.99 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 2393 3505 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 3607 3833 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 4016 4164 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 4251 4491 0.65 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 4662 4991 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 5098 5244 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 5354 5704 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 5851 5946 1 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS intron 6117 6609 0.99 + . transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 541 640 0.82 + 0 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 788 940 0.99 + 2 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 2178 2392 1 + 2 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 3506 3606 1 + 0 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 3834 4015 1 + 1 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 4165 4250 1 + 2 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 4492 4661 0.65 + 0 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 4992 5097 1 + 1 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 5245 5353 1 + 0 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 5705 5850 1 + 2 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 5947 6116 1 + 0 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS CDS 6610 6790 1 + 1 transcript_id "g87.t1"; gene_id "g87"; scaffold_6_13934146-13941535 AUGUSTUS stop_codon 6788 6790 . + 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [NNHGGSVVSRLYQHALVSTHMFMQACSTCYISTGPGVFDVQHRPDVTHNCRRDLLLCRNRAESLWMRVRARPKNQVFG # PYVLCKEILQSGLKKGCKYGEACMFAFCQQEIDVWTQERKGALSRDLLFGTPDTSPGSVPTVKHLLQLYNGMFLFLCKECYDSKPRIISKRSEEAPGM # CSNLSARHPFNSNKCLVHAVRSTSVSYSKIRPLHAPCHYDVCRHAIRYGCQREDTCLFAHSVIELKFWMLQRDTGITPEEMVLESTKHWNKLEQNAPK # QGGNRPVSAPQSQATGGARGGGGQNKGLPMRMKFVCGQCWKDGLVSEPDKALKYCTAKARHSWTKERRMLLAMSLERKKWAMVRPVPYAKTYPQQYEM # CGHVAKHRKCTFIGSCSYAHSLEEKEVWTYMKNHNLKDLQQMYDIWKSLTGQTRQPDGAWHSQPSNICSEDKCIVMPTDFAEPMNGFHCRLCGRHSNS # ERQWRQHISSEKHKDRVFSCEGEDESLAWAYRFPGPRLTLCPRLESGCEEGVSCDYAHGEEELAEWKERRDFLRRKLAKAREDMLIMPDEFDFGKYNF # LLQD] # end gene g87 ### # # ----- sequence number 86 (length = 3785, name = scaffold_6_16612405-16616189) ----- # # annotation: # Sequence scaffold_6_16612405-16616189 length=3785 scaffold_6_16612405-16616189 database start_codon 601 603 . + 0 transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database intron 682 1282 . + . transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database intron 1373 1573 . + . transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database intron 1730 1832 . + . transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database CDS 601 681 . + 0 transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database CDS 1283 1372 . + 0 transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database CDS 1574 1729 . + 0 transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database CDS 1833 3185 . + 0 transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; scaffold_6_16612405-16616189 database stop_codon 3183 3185 . + 0 transcript_id "g_2442-T1.1"; gene_id "g_2442-T1"; # Predicted genes for sequence number 86 on both strands # start gene g88 scaffold_6_16612405-16616189 AUGUSTUS gene 1 3185 0.82 + . g88 scaffold_6_16612405-16616189 AUGUSTUS transcript 1 3185 0.82 + . g88.t1 scaffold_6_16612405-16616189 AUGUSTUS intron 1 441 0.82 + . transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS intron 682 1282 1 + . transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS intron 1373 1573 1 + . transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS intron 1730 1832 1 + . transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS CDS 442 681 1 + 0 transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS CDS 1283 1372 1 + 0 transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS CDS 1574 1729 1 + 0 transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS CDS 1833 3185 1 + 0 transcript_id "g88.t1"; gene_id "g88"; scaffold_6_16612405-16616189 AUGUSTUS stop_codon 3183 3185 . + 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [DADTTSTPRAAGVRHDPDQTFNTSLQLQSHPAPPVLPLDEEGEEEEEEEEEEEMAAVNWGAGPCSYNRANRDLAQELS # EQFASLETQSSVSLQECLRLLEDTFPLTQESQLPEEEGLDLRGGLVEPPSPGTEPLLSPLLTHVDPLLDLEEQWQDLLAIMEPEDMDVDPTVAPTFPG # RSGADHTPDHTPSDQHHLNPLEQDVSLHHAFLPVGPQDGDGSLRSSSDPQEPPRWPQPALPTQLPSSPESLNTSAHIRDSVENGTAGDPTTSDLFLEE # ALSSPLASLLDDSAMFDEISLLDLALVEGFSPALASRLEDELDSDSGLSLNFSHSPASPSSSEASYSSSSSSSSEASTAASLFSEEGAVGYSSDVAEE # GEEEGAMGGYSTDLNKICPISYQDPTSFNHLPWLQHVDHDHTYNQQRPTTPAPTKTQKGLRPHHAKPYGHGATDRMWGRDERRARSLKIPFSNENIVN # LPVEEFNDLLAKHHLTDAQLTLVRDIRRRGKNKMAAQNCRRRKLDVLLDLEQGVSGLRRHRARLLREKTEVLRSVQAMKQRVSSLYQEVFSRLRDEEG # RPLAAEEYALQFGSDGRVLVASRRQGSAGEPDHRAGKRQGRRKK] # end gene g88 ### # # ----- sequence number 87 (length = 4926, name = scaffold_6_17033471-17038396) ----- # # annotation: # Sequence scaffold_6_17033471-17038396 length=4926 scaffold_6_17033471-17038396 database start_codon 601 603 . + 0 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 1270 1712 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 2045 2146 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 2413 2591 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 2657 2831 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 2900 3533 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 3659 4061 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database intron 4135 4235 . + . transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 601 1269 . + 0 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 1713 2044 . + 0 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 2147 2412 . + 1 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 2592 2656 . + 2 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 2832 2899 . + 0 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 3534 3658 . + 1 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 4062 4134 . + 2 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database CDS 4236 4326 . + 1 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; scaffold_6_17033471-17038396 database stop_codon 4324 4326 . + 0 transcript_id "g_2445-T1.1"; gene_id "g_2445-T1"; # Predicted genes for sequence number 87 on both strands # start gene g89 scaffold_6_17033471-17038396 AUGUSTUS gene 601 4326 0.67 + . g89 scaffold_6_17033471-17038396 AUGUSTUS transcript 601 4326 0.67 + . g89.t1 scaffold_6_17033471-17038396 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 1270 1712 1 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 2045 2146 1 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 2413 2591 1 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 2657 2831 0.99 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 2900 3533 1 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 3659 4061 0.89 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS intron 4135 4235 1 + . transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 601 1269 0.74 + 0 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 1713 2044 1 + 0 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 2147 2412 1 + 1 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 2592 2656 0.99 + 2 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 2832 2899 1 + 0 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 3534 3658 0.89 + 1 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 4062 4134 1 + 2 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS CDS 4236 4326 1 + 1 transcript_id "g89.t1"; gene_id "g89"; scaffold_6_17033471-17038396 AUGUSTUS stop_codon 4324 4326 . + 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MTSSVFINGGYKPDSGKADLAKVQTEPFPSLRRESCVSTLPPPTVLGNIHNSSPHSLQGKAKVPSQGQVVTCRPGQQH # PGAGEGQEENWGSVGIQSTPLRPMGGESGSPIKSKTLLGHNNNNNMGKVDAAALNAPKHARDGVGGDGEARGGVAASAAVGGPQAPGLSQEGKRGGLR # KGTGHSPAQSSCIRQILLLQLELIEQQQQELHNKSKEIDHLNAEKETLLARIERMEHRLQMGKREAAPLQMGKREAAPLQMGKREAAPLQMGKREATG # GELATQRLLLPPQTHTPLREDQGSPPKAPESQGGAGDEGRGPCNTPRTLHFGRGGKGHKRRFLFQDPRSAKRRAQAKVLQKEALVPKEEPVERGGGME # EEVSPRTSHNLPQMEEPCYLSTTDMYLCCWHQPPPSPWRQPSPKKEESVAIPSWRDNIMDPLSEDEATDIPENLEDSVFLKRHSKHELDEKRRKRWDI # QRIREQRMFQRLQQRMNRRKGIQENEPEVLSFYPDAEDVEALIVTPHLPVVAFGRPLPKLARRNFDLPWLDERSRCRAEVPKKQTPHRTCRK] # end gene g89 ### # # ----- sequence number 88 (length = 4532, name = scaffold_6_19154958-19159489) ----- # # annotation: # Sequence scaffold_6_19154958-19159489 length=4532 scaffold_6_19154958-19159489 database start_codon 601 603 . + 0 transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; scaffold_6_19154958-19159489 database intron 670 2956 . + . transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; scaffold_6_19154958-19159489 database intron 3104 3773 . + . transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; scaffold_6_19154958-19159489 database CDS 601 669 . + 0 transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; scaffold_6_19154958-19159489 database CDS 2957 3103 . + 0 transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; scaffold_6_19154958-19159489 database CDS 3774 3932 . + 0 transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; scaffold_6_19154958-19159489 database stop_codon 3930 3932 . + 0 transcript_id "g_2454-T1.1"; gene_id "g_2454-T1"; # Predicted genes for sequence number 88 on both strands # start gene g90 scaffold_6_19154958-19159489 AUGUSTUS gene 1 2487 0.15 + . g90 scaffold_6_19154958-19159489 AUGUSTUS transcript 1 2487 0.15 + . g90.t1 scaffold_6_19154958-19159489 AUGUSTUS intron 1 598 0.66 + . transcript_id "g90.t1"; gene_id "g90"; scaffold_6_19154958-19159489 AUGUSTUS intron 751 1987 0.2 + . transcript_id "g90.t1"; gene_id "g90"; scaffold_6_19154958-19159489 AUGUSTUS intron 2008 2351 0.38 + . transcript_id "g90.t1"; gene_id "g90"; scaffold_6_19154958-19159489 AUGUSTUS CDS 599 750 0.44 + 2 transcript_id "g90.t1"; gene_id "g90"; scaffold_6_19154958-19159489 AUGUSTUS CDS 1988 2007 0.38 + 0 transcript_id "g90.t1"; gene_id "g90"; scaffold_6_19154958-19159489 AUGUSTUS CDS 2352 2487 0.41 + 1 transcript_id "g90.t1"; gene_id "g90"; scaffold_6_19154958-19159489 AUGUSTUS stop_codon 2485 2487 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MMAKEKPPITVVGDVGGRIAIIVVSYLKVCLLFTCLSSGQGQQESESGQEDPRFSARSGHEAGRGIWGEVIARAASRT # ELTSEGSKHVYSDEQTIANYNIN] # end gene g90 ### # start gene g91 scaffold_6_19154958-19159489 AUGUSTUS gene 2759 3932 0.96 + . g91 scaffold_6_19154958-19159489 AUGUSTUS transcript 2759 3932 0.96 + . g91.t1 scaffold_6_19154958-19159489 AUGUSTUS start_codon 2759 2761 . + 0 transcript_id "g91.t1"; gene_id "g91"; scaffold_6_19154958-19159489 AUGUSTUS intron 2834 2956 0.96 + . transcript_id "g91.t1"; gene_id "g91"; scaffold_6_19154958-19159489 AUGUSTUS intron 3104 3773 1 + . transcript_id "g91.t1"; gene_id "g91"; scaffold_6_19154958-19159489 AUGUSTUS CDS 2759 2833 0.96 + 0 transcript_id "g91.t1"; gene_id "g91"; scaffold_6_19154958-19159489 AUGUSTUS CDS 2957 3103 1 + 0 transcript_id "g91.t1"; gene_id "g91"; scaffold_6_19154958-19159489 AUGUSTUS CDS 3774 3932 1 + 0 transcript_id "g91.t1"; gene_id "g91"; scaffold_6_19154958-19159489 AUGUSTUS stop_codon 3930 3932 . + 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MCFWRLEGPPIVQRFESEVLWLDDMDDIIDDVEDFVAAAEILKERGAYKIYIMATHGLLSADAPRLIEESAIDEVVVT # NTVPHEMQKLQCPKIKTVDVSMILAEAIRRIHNGESMAYLFRNITVDD] # end gene g91 ### # # ----- sequence number 89 (length = 10013, name = scaffold_7_1226994-1237006) ----- # # annotation: # Sequence scaffold_7_1226994-1237006 length=10013 scaffold_7_1226994-1237006 database start_codon 601 603 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 1594 2108 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 2181 2890 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 2960 4354 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 4439 5992 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 6053 6671 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 6717 8454 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 8509 8759 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database intron 8904 9335 . + . transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 601 1593 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 2109 2180 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 2891 2959 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 4355 4438 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 5993 6052 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 6672 6716 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 8455 8508 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 8760 8903 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database CDS 9336 9413 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; scaffold_7_1226994-1237006 database stop_codon 9411 9413 . + 0 transcript_id "g_2461-T1.1"; gene_id "g_2461-T1"; # Predicted genes for sequence number 89 on both strands # start gene g92 scaffold_7_1226994-1237006 AUGUSTUS gene 1 9654 0.34 + . g92 scaffold_7_1226994-1237006 AUGUSTUS transcript 1 9654 0.34 + . g92.t1 scaffold_7_1226994-1237006 AUGUSTUS intron 1594 2108 0.99 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS intron 2181 2890 0.91 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS intron 2960 4354 0.81 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS intron 4439 5992 0.93 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS intron 6053 8454 0.56 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS intron 8509 8759 0.66 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS intron 8904 9597 0.69 + . transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 1 1593 1 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 2109 2180 0.93 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 2891 2959 1 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 4355 4438 0.94 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 5993 6052 0.96 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 8455 8508 0.66 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 8760 8903 0.8 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS CDS 9598 9654 0.72 + 0 transcript_id "g92.t1"; gene_id "g92"; scaffold_7_1226994-1237006 AUGUSTUS stop_codon 9652 9654 . + 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [GLNTDCESERTSPFPDLYPTPGSSRESILSESWDGDPSWGRSWSALPPVSPEPSSPFSPSRTISPCSSIRSGTFSPTV # VRLTRHALAPGSRLLHMPPPSPPSLSLSLSKSLSPLPPPPAPTRLSLLTAILRKGRLPVLSSSRQRPYTPCWPINPLSLSTCKACSAASSLASIHLEP # TSRGTPSASTPSPALGHCSGDGSVMAPPGGGPLTSTDRPAEGRRKDRQGVCGGGTCSSPAAAVPLPLPLPLPRLPFSPDPPDSPPSPSSPSPHRQPPD # SYSSPQTIVAQISCPYPCSRGTGSLTRENTPINPQQGRNHQNPGPPLLFSHTKLFIPSSPQLINTPETHASPGPLASLSSLYSASAVPTPPPYLRSSP # TLAPPSSFALPAPPPPASSPSVAQPLVSNLHITTAPPQGRSTQTPSPLFQNGLSGRPQQCKPDPCSLLAPPARSSLPQAHSLSPSRYTPLIFPGSPSP # DLHIHRPSPSATPDRLTLSPSPAPPSRTLTLSPSASLRSTPSPRPGSGLSDCSDREGEKRKPHKIKLSYKALAAIPTNTLLLDQQAIDDSVEMPADRR # DEGRQDTHVEMCSPAQLRQQTEELYAVIDKVLEDPLPLRNPLPARWSSRELLDRGATKATRHTHPSTESSLLDNTATRPGVIKPVNFTPRLTVANDDE # DGDGDGYHGNPFRQYMKDVSDSHSSKRGPSASIKGLGSDILILR] # end gene g92 ### # # ----- sequence number 90 (length = 11207, name = scaffold_7_4926097-4937303) ----- # # annotation: # Sequence scaffold_7_4926097-4937303 length=11207 scaffold_7_4926097-4937303 database start_codon 601 603 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 1536 2285 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 2347 2429 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 2632 3119 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 3170 3286 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 3394 3528 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 3683 4083 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 4225 4601 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 4695 7278 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 7423 7529 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 7607 8448 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 8493 9745 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 9907 10000 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 10108 10277 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database intron 10399 10541 . + . transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 601 1535 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 2286 2346 . + 1 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 2430 2631 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 3120 3169 . + 2 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 3287 3393 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 3529 3682 . + 1 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 4084 4224 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 4602 4694 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 7279 7422 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 7530 7606 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 8449 8492 . + 1 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 9746 9906 . + 2 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 10001 10107 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 10278 10398 . + 1 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database CDS 10542 10607 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; scaffold_7_4926097-4937303 database stop_codon 10605 10607 . + 0 transcript_id "g_2475-T1.1"; gene_id "g_2475-T1"; # Predicted genes for sequence number 90 on both strands # start gene g93 scaffold_7_4926097-4937303 AUGUSTUS gene 1 10607 0.15 + . g93 scaffold_7_4926097-4937303 AUGUSTUS transcript 1 10607 0.15 + . g93.t1 scaffold_7_4926097-4937303 AUGUSTUS intron 1 116 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 571 668 0.78 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 1536 2285 0.59 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 2347 2429 0.96 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 2632 3119 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 3170 3286 0.99 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 3394 3528 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 3683 4083 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 4225 4601 0.99 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 4695 5542 0.74 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 5603 7278 0.71 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 7423 7529 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 7607 8448 0.89 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 8493 9132 0.62 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 9142 9745 0.58 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 9907 10000 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 10108 10277 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS intron 10399 10541 1 + . transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 117 570 0.78 + 2 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 669 1535 0.73 + 1 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 2286 2346 0.85 + 1 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 2430 2631 0.96 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 3120 3169 1 + 2 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 3287 3393 0.99 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 3529 3682 1 + 1 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 4084 4224 1 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 4602 4694 0.89 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 5543 5602 0.78 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 7279 7422 0.95 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 7530 7606 1 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 8449 8492 0.96 + 1 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 9133 9141 0.62 + 2 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 9746 9906 1 + 2 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 10001 10107 1 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 10278 10398 1 + 1 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS CDS 10542 10607 1 + 0 transcript_id "g93.t1"; gene_id "g93"; scaffold_7_4926097-4937303 AUGUSTUS stop_codon 10605 10607 . + 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [FGAGSVTDSDPASDLPAGRPPSRSLSIVFDEDKPIAASGTYNFEAPTAGSPTRAPLTRSLSLQAGEFDDSTDRFVTEG # LLSTAEPFSAGTESAPGTLLRAKKVRPGSLKKKPLLRQSSNPENPQPTSSSSTPELKKKVKPRAASPSQSQEGPEDVQPNISLNLCQEKATFPVPELP # VTEEESPVPPSGSYKWDPENFEEINPFNSGGSKIANSPVLGRKGPVAASNLSPPKSPSVLAEEPACSDPPITLLAGSVPNLEEVPILPKRQPVRLEFD # YSEENGEASHQASPPPKRLGKKPGTKMPLRKPRLGVKKVPPPQMEPLENATTSYPNNDDDIAIPKATYNFDPNKWEDPNFNPFSSKSGIPNSPKLSRP # SYSYPEDLFDDSIESLKSSNTMTSSPPKTASASFEMTNDKDIENDNVGELQERNQNKPAKKKKTPIKSNTFRVKRSPKRSPMSDPSSQKPTPEDETPP # LPLQDDHATDEEKLASSTKWAALHDMESELISDTQDFPQPSDLTSFVNENSLPPQTHVPDYEIEYMEKIGSSSPPLSVKKPSLYLKLESVTDNLTNTC # SHGSEPNSPCTGSFEEMEAQITAGMKTPVLNSRPALEGSVGDKGRKWESQELSHPHSADRDGVPPSEGFVEPSAQATPLLDRLPANDNPLQYLEPDLA # ETNPTAFALKLQEELVLAALRIEALQVAQNISQCPSLSTVTPQSLLKKPSLRRWILNGIALVKQREREVASPRESSVSEGTLYTSRTTYAQQESSYLP # RDLDQSLGIAREEIVTKEKEVLEWQRKYEESHQEVVEMRRIVAEYEKTIAQMIGMPEDEQKEKSLSHHTIQQLIVEKDQALADLNSVEKSLADLFRRY # EKMKDVLEGFRKNEEVLKKCAQEYLSRVRKEEQRYQALKIHAEEKLDKANTDIAQVRTKAKQEQAAYQASLRKEQMKVDSLERTLEQKNKEIEELTKI # CDELIAKMGKS] # end gene g93 ### # # ----- sequence number 91 (length = 3231, name = scaffold_7_6447531-6450761) ----- # # annotation: # Sequence scaffold_7_6447531-6450761 length=3231 scaffold_7_6447531-6450761 database start_codon 601 603 . + 0 transcript_id "g_2485-T1.1"; gene_id "g_2485-T1"; scaffold_7_6447531-6450761 database intron 856 1206 . + . transcript_id "g_2485-T1.1"; gene_id "g_2485-T1"; scaffold_7_6447531-6450761 database CDS 601 855 . + 0 transcript_id "g_2485-T1.1"; gene_id "g_2485-T1"; scaffold_7_6447531-6450761 database CDS 1207 2631 . + 0 transcript_id "g_2485-T1.1"; gene_id "g_2485-T1"; scaffold_7_6447531-6450761 database stop_codon 2629 2631 . + 0 transcript_id "g_2485-T1.1"; gene_id "g_2485-T1"; # Predicted genes for sequence number 91 on both strands # start gene g94 scaffold_7_6447531-6450761 AUGUSTUS gene 1 2631 0.45 + . g94 scaffold_7_6447531-6450761 AUGUSTUS transcript 1 2631 0.45 + . g94.t1 scaffold_7_6447531-6450761 AUGUSTUS intron 1 1206 0.7 + . transcript_id "g94.t1"; gene_id "g94"; scaffold_7_6447531-6450761 AUGUSTUS CDS 1207 2631 0.65 + 0 transcript_id "g94.t1"; gene_id "g94"; scaffold_7_6447531-6450761 AUGUSTUS stop_codon 2629 2631 . + 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [LDAKKSPLALLAQTCSQIGKPDPPPSSKLSSVTSNGSSDKESKSGPLKLSDIGVDDKSSFKPYSKPSDKKDSSTGGSG # GEKSGFRVPSATCQPFTPRTGSPNSSTSASPMPSEGKCGDRDDKKDSDCNKNGTTDASGTTNSHSRISVSCGGINVEVNQHQDTTPGTKATSSESSIT # SVSSASVLGSGLVAPVSPYKPGQTVFPLPPAGMAYPGSLAGAYAGYPQHFLPHGGSLVNAQLASSLGCSKAGSSPLAGASPPTMMSASLCRDPYCLSY # HCASHLAGAASASCAHDSAAVAAASALKSGYPLMYPTHPLHTVHASAHSFSGHPLYPYGFMLPNDPLPHVCNWVSANGPCDKRFSSSEELLNHLRTHT # AFTGAEKLISGYPSSSSLASAAAAAMACHMHMPPSGAPGSPGTLALRSPHHALGLSTRYHPYSKSPLPNGAPVPVPAATGPYYSPYALYGQRLTTASA # LGYQ] # end gene g94 ### # # ----- sequence number 92 (length = 4305, name = scaffold_7_8846469-8850773) ----- # # annotation: # Sequence scaffold_7_8846469-8850773 length=4305 scaffold_7_8846469-8850773 database start_codon 601 603 . + 0 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 787 1092 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 1194 1447 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 1579 1819 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 1922 2204 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 2321 2712 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 2848 3269 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database intron 3368 3497 . + . transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 601 786 . + 0 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 1093 1193 . + 0 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 1448 1578 . + 1 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 1820 1921 . + 2 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 2205 2320 . + 2 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 2713 2847 . + 0 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 3270 3367 . + 0 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database CDS 3498 3705 . + 1 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; scaffold_7_8846469-8850773 database stop_codon 3703 3705 . + 0 transcript_id "g_2507-T1.1"; gene_id "g_2507-T1"; # Predicted genes for sequence number 92 on both strands # start gene g95 scaffold_7_8846469-8850773 AUGUSTUS gene 1 3705 0.47 + . g95 scaffold_7_8846469-8850773 AUGUSTUS transcript 1 3705 0.47 + . g95.t1 scaffold_7_8846469-8850773 AUGUSTUS intron 1 1092 0.57 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS intron 1194 1447 0.84 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS intron 1579 1819 1 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS intron 1922 2204 0.94 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS intron 2321 2712 1 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS intron 2848 3269 0.89 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS intron 3368 3497 0.9 + . transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 1093 1193 0.8 + 0 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 1448 1578 1 + 1 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 1820 1921 1 + 2 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 2205 2320 0.94 + 2 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 2713 2847 0.98 + 0 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 3270 3367 0.89 + 0 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS CDS 3498 3705 0.92 + 1 transcript_id "g95.t1"; gene_id "g95"; scaffold_7_8846469-8850773 AUGUSTUS stop_codon 3703 3705 . + 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [IEKAKPIKCGTFGATSLQQRHLATGDFDGTLNIWNLEVPEVPVYSVKAHKEIVNSIDGVGGLGIGDGAPEIVTGSRDG # TVKVWDTRQRDSPVANMEPGEGETKRDCWTVAFGHAFNDQDRCVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCCVEFDRKDINMNKLVATSLEGKFH # VFDMRTQHPTKGFASVSEKAHKSTIWQVRHLPQNRDIFMTAGGAGNLHLWKYEYPAQRSKKDADEVDMGVAGTVNLLQNVTLSSQPIASLDWSPDKQG # LCVCSAFDQSVRVLIVTKLNRV] # end gene g95 ### # # ----- sequence number 93 (length = 2463, name = scaffold_7_9310712-9313174) ----- # # annotation: # Sequence scaffold_7_9310712-9313174 length=2463 scaffold_7_9310712-9313174 database start_codon 601 603 . + 0 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database intron 644 843 . + . transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database intron 1016 1162 . + . transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database intron 1224 1300 . + . transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database intron 1408 1504 . + . transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database intron 1655 1820 . + . transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database CDS 601 643 . + 0 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database CDS 844 1015 . + 2 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database CDS 1163 1223 . + 1 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database CDS 1301 1407 . + 0 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database CDS 1505 1654 . + 1 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database CDS 1821 1863 . + 1 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; scaffold_7_9310712-9313174 database stop_codon 1861 1863 . + 0 transcript_id "g_2509-T1.1"; gene_id "g_2509-T1"; # Predicted genes for sequence number 93 on both strands # start gene g96 scaffold_7_9310712-9313174 AUGUSTUS gene 601 1658 0.45 + . g96 scaffold_7_9310712-9313174 AUGUSTUS transcript 601 1658 0.45 + . g96.t1 scaffold_7_9310712-9313174 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS intron 644 843 0.98 + . transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS intron 1016 1198 0.57 + . transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS intron 1224 1300 0.65 + . transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS intron 1408 1504 0.66 + . transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS CDS 601 643 0.98 + 0 transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS CDS 844 1015 0.99 + 2 transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS CDS 1199 1223 0.57 + 1 transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS CDS 1301 1407 0.65 + 0 transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS CDS 1505 1658 0.79 + 1 transcript_id "g96.t1"; gene_id "g96"; scaffold_7_9310712-9313174 AUGUSTUS stop_codon 1656 1658 . + 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MSIKRDSSTEESLQGSWIELHYGTSSQGVLSPQETEGREQISSMQVDLEKLLLDAQHESGRSSSKGSSQCNRGSEGNS # SQSEEDYQERRQEVESMMKKNADWIWDWSSRPENNPPKELLLKHRRRSGNLSIRNTSVMKKGGVLSPDFLKLILPSLIISHILAVGLG] # end gene g96 ### # # ----- sequence number 94 (length = 3939, name = scaffold_7_10709841-10713779) ----- # # annotation: # Sequence scaffold_7_10709841-10713779 length=3939 scaffold_7_10709841-10713779 database start_codon 601 603 . + 0 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 704 856 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 922 1048 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 1185 1408 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 1509 1630 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 1762 1866 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 1976 2086 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 2144 2296 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 2375 2484 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 2656 2911 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database intron 3014 3197 . + . transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 601 703 . + 0 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 857 921 . + 2 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 1049 1184 . + 0 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 1409 1508 . + 2 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 1631 1761 . + 1 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 1867 1975 . + 2 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 2087 2143 . + 1 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 2297 2374 . + 1 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 2485 2655 . + 1 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 2912 3013 . + 1 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database CDS 3198 3339 . + 1 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; scaffold_7_10709841-10713779 database stop_codon 3337 3339 . + 0 transcript_id "g_2518-T1.1"; gene_id "g_2518-T1"; # Predicted genes for sequence number 94 on both strands # start gene g97 scaffold_7_10709841-10713779 AUGUSTUS gene 1 3339 0.46 + . g97 scaffold_7_10709841-10713779 AUGUSTUS transcript 1 3339 0.46 + . g97.t1 scaffold_7_10709841-10713779 AUGUSTUS intron 65 168 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 318 441 0.74 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 498 606 0.73 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 704 856 0.76 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 922 1048 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 1185 1408 0.97 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 1509 1630 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 1762 1866 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 1976 2086 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 2144 2296 0.65 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 2375 2484 0.93 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 2656 2911 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS intron 3014 3197 1 + . transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 1 64 1 + 2 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 169 317 1 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 442 497 0.73 + 2 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 607 703 0.74 + 0 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 857 921 1 + 2 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 1049 1184 0.97 + 0 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 1409 1508 0.98 + 2 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 1631 1761 1 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 1867 1975 1 + 2 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 2087 2143 1 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 2297 2374 0.65 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 2485 2655 1 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 2912 3013 1 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS CDS 3198 3339 0.95 + 1 transcript_id "g97.t1"; gene_id "g97"; scaffold_7_10709841-10713779 AUGUSTUS stop_codon 3337 3339 . + 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [DTKPEDDCFPPDDFSVDHTPTNPYSSTIKEMLTTFGTATYKVGLKVHPNEQDARVPIMCWGSCAYTIQSIERMLVDED # KPLFGGLPCRQEDCLSSLARFGSACWIATSLPTVQAHFIRLLAALVPDPQEKSPCILDVDMFHLLVSLVLSYPALHCQDSSGRSMDAAQLHFLHLVTV # GHLVQILLTSGPVEAAMDQESGGAEREEEEEAICRLYNTIRTHLGSSLPELTSGWHLWRCVKAGILPYLRAAALFFHHLNGAPTPPELHALGSGQWEV # LCGYLSLPSNLMQLYYSYQELLEPLVKGWCSHPDVRQTLQGGDPLVSFPRESNRLIDLPDDYSALINQASSFTCPKSGGDKSRAPTLCLVCGTMLCSQ # SYCCQTELEGEDVGACTAHTFVCGAGLGIFLRVRESQVLFLAGKTKGCFYAPPYLDDYGETDQGLRRGNPLHLCRERYRKIQKLWRQHSITEEIGHAQ # EANQTLVGIDWQHL] # end gene g97 ### # # ----- sequence number 95 (length = 3113, name = scaffold_7_12612760-12615872) ----- # # annotation: # Sequence scaffold_7_12612760-12615872 length=3113 scaffold_7_12612760-12615872 database start_codon 601 603 . + 0 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database intron 702 1039 . + . transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database intron 1148 1389 . + . transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database intron 1472 1644 . + . transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database intron 1775 1974 . + . transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database intron 2082 2327 . + . transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database CDS 601 701 . + 0 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database CDS 1040 1147 . + 1 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database CDS 1390 1471 . + 1 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database CDS 1645 1774 . + 0 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database CDS 1975 2081 . + 2 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database CDS 2328 2513 . + 0 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; scaffold_7_12612760-12615872 database stop_codon 2511 2513 . + 0 transcript_id "g_2535-T1.1"; gene_id "g_2535-T1"; # Predicted genes for sequence number 95 on both strands # start gene g98 scaffold_7_12612760-12615872 AUGUSTUS gene 1 2513 0.48 + . g98 scaffold_7_12612760-12615872 AUGUSTUS transcript 1 2513 0.48 + . g98.t1 scaffold_7_12612760-12615872 AUGUSTUS intron 1 1039 0.49 + . transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS intron 1148 1389 0.54 + . transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS intron 1472 1644 0.71 + . transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS intron 1775 1974 1 + . transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS intron 2082 2327 1 + . transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS CDS 1040 1147 0.55 + 1 transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS CDS 1390 1471 0.71 + 1 transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS CDS 1645 1774 0.94 + 0 transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS CDS 1975 2081 1 + 2 transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS CDS 2328 2513 1 + 0 transcript_id "g98.t1"; gene_id "g98"; scaffold_7_12612760-12615872 AUGUSTUS stop_codon 2511 2513 . + 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [TVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAI # AAMLSTILYGRRFFPYYVYNIIGGLDEQGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVQHLPLSQDKAVQLVKDVFISAAERD # VYTGDALRICIITKEGIKEETVPLRKD] # end gene g98 ### # # ----- sequence number 96 (length = 3973, name = scaffold_7_17804504-17808476) ----- # # annotation: # Sequence scaffold_7_17804504-17808476 length=3973 scaffold_7_17804504-17808476 database start_codon 486 488 . + 0 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 593 1094 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 1222 1339 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 1489 1585 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 1716 1815 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 1890 2031 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 2188 2478 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 2612 2753 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database intron 2810 3355 . + . transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 486 592 . + 0 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 1095 1221 . + 1 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 1340 1488 . + 0 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 1586 1715 . + 1 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 1816 1889 . + 0 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 2032 2187 . + 1 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 2479 2611 . + 1 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 2754 2809 . + 0 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database CDS 3356 3464 . + 1 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; scaffold_7_17804504-17808476 database stop_codon 3462 3464 . + 0 transcript_id "g_2558-T1.1"; gene_id "g_2558-T1"; # Predicted genes for sequence number 96 on both strands # start gene g99 scaffold_7_17804504-17808476 AUGUSTUS gene 486 3439 0.51 + . g99 scaffold_7_17804504-17808476 AUGUSTUS transcript 486 3439 0.51 + . g99.t1 scaffold_7_17804504-17808476 AUGUSTUS start_codon 486 488 . + 0 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS intron 593 1585 0.73 + . transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS intron 1716 1815 0.92 + . transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS intron 1890 2031 0.92 + . transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS intron 2188 2478 0.9 + . transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS intron 2612 3355 0.8 + . transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS CDS 486 592 0.92 + 0 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS CDS 1586 1715 0.91 + 1 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS CDS 1816 1889 0.92 + 0 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS CDS 2032 2187 0.96 + 1 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS CDS 2479 2611 0.79 + 1 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS CDS 3356 3439 0.84 + 0 transcript_id "g99.t1"; gene_id "g99"; scaffold_7_17804504-17808476 AUGUSTUS stop_codon 3437 3439 . + 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MEPKNYIAQLNELTQRTRSELKYEDVGAEGPDHIKRYCCGVAVGDQEYQKAFGDTRKEAKEEAAKRVYNEIIADNQTT # GTAEESGKDNASPQNKDWSQDAESTGSVVQNLCMDSPTEQPSCTDTNFIGALNEYCQKLKLVYDYKLVERRGPSHDPQFVYKVVLDSKEYPEGVGKTA # KSAKQLAAELTWLALQKQLDWNNQRVPGPNTYGDQPYRLSHVCRINKHQPG] # end gene g99 ### # # ----- sequence number 97 (length = 5171, name = scaffold_8_3618351-3623521) ----- # # annotation: # Sequence scaffold_8_3618351-3623521 length=5171 scaffold_8_3618351-3623521 database start_codon 601 603 . + 0 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database intron 752 1168 . + . transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database intron 1290 1759 . + . transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database intron 1846 3010 . + . transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database intron 3122 4422 . + . transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database CDS 601 751 . + 0 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database CDS 1169 1289 . + 2 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database CDS 1760 1845 . + 1 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database CDS 3011 3121 . + 2 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database CDS 4423 4571 . + 2 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; scaffold_8_3618351-3623521 database stop_codon 4569 4571 . + 0 transcript_id "g_2568-T1.1"; gene_id "g_2568-T1"; # Predicted genes for sequence number 97 on both strands # start gene g100 scaffold_8_3618351-3623521 AUGUSTUS gene 601 2522 0.88 + . g100 scaffold_8_3618351-3623521 AUGUSTUS transcript 601 2522 0.88 + . g100.t1 scaffold_8_3618351-3623521 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS intron 752 1168 1 + . transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS intron 1290 1759 1 + . transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS intron 1846 2247 0.91 + . transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS CDS 601 751 0.97 + 0 transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS CDS 1169 1289 1 + 2 transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS CDS 1760 1845 0.91 + 1 transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS CDS 2248 2522 0.91 + 2 transcript_id "g100.t1"; gene_id "g100"; scaffold_8_3618351-3623521 AUGUSTUS stop_codon 2520 2522 . + 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MAQETNQSQGPLLCTTGCGFYGNPRNSGMCSVCYKDFLQRQNSNGRMSPPGSSSSACSSLGESLLAQCSESSTVDVPS # ASPHTDTAPGHTSPALLTPASTDSSEGSPATKAGLKGEEIQGLSSPALALASAQASTSAQPKPTTTPTTAKLLHALLSPPTTLAPRREEDRRLQQQGQ # RSHGRALGPDQGRALGPDQGRALGPDQEQALGPD] # end gene g100 ### # start gene g101 scaffold_8_3618351-3623521 AUGUSTUS gene 2899 4571 0.83 + . g101 scaffold_8_3618351-3623521 AUGUSTUS transcript 2899 4571 0.83 + . g101.t1 scaffold_8_3618351-3623521 AUGUSTUS start_codon 2899 2901 . + 0 transcript_id "g101.t1"; gene_id "g101"; scaffold_8_3618351-3623521 AUGUSTUS intron 2924 3010 0.83 + . transcript_id "g101.t1"; gene_id "g101"; scaffold_8_3618351-3623521 AUGUSTUS intron 3122 4422 1 + . transcript_id "g101.t1"; gene_id "g101"; scaffold_8_3618351-3623521 AUGUSTUS CDS 2899 2923 0.86 + 0 transcript_id "g101.t1"; gene_id "g101"; scaffold_8_3618351-3623521 AUGUSTUS CDS 3011 3121 0.97 + 2 transcript_id "g101.t1"; gene_id "g101"; scaffold_8_3618351-3623521 AUGUSTUS CDS 4423 4571 1 + 2 transcript_id "g101.t1"; gene_id "g101"; scaffold_8_3618351-3623521 AUGUSTUS stop_codon 4569 4571 . + 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MHITLEGKSSVSVPEEAVEDQEQASDKPKAKKNRCFTCRKKVGLTGFDCRCGHVFCGMHRYSDIHSCTFDYKADAAEK # IRKENPVIVGEKIQKI] # end gene g101 ### # # ----- sequence number 98 (length = 4559, name = scaffold_8_4346366-4350924) ----- # # annotation: # Sequence scaffold_8_4346366-4350924 length=4559 scaffold_8_4346366-4350924 database start_codon 601 603 . + 0 transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; scaffold_8_4346366-4350924 database intron 847 1499 . + . transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; scaffold_8_4346366-4350924 database intron 1847 3907 . + . transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; scaffold_8_4346366-4350924 database CDS 601 846 . + 0 transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; scaffold_8_4346366-4350924 database CDS 1500 1846 . + 0 transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; scaffold_8_4346366-4350924 database CDS 3908 3959 . + 1 transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; scaffold_8_4346366-4350924 database stop_codon 3957 3959 . + 0 transcript_id "g_2574-T1.1"; gene_id "g_2574-T1"; # Predicted genes for sequence number 98 on both strands # start gene g102 scaffold_8_4346366-4350924 AUGUSTUS gene 601 3959 0.79 + . g102 scaffold_8_4346366-4350924 AUGUSTUS transcript 601 3959 0.79 + . g102.t1 scaffold_8_4346366-4350924 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g102.t1"; gene_id "g102"; scaffold_8_4346366-4350924 AUGUSTUS intron 847 1499 0.98 + . transcript_id "g102.t1"; gene_id "g102"; scaffold_8_4346366-4350924 AUGUSTUS intron 1847 3907 0.82 + . transcript_id "g102.t1"; gene_id "g102"; scaffold_8_4346366-4350924 AUGUSTUS CDS 601 846 0.97 + 0 transcript_id "g102.t1"; gene_id "g102"; scaffold_8_4346366-4350924 AUGUSTUS CDS 1500 1846 0.98 + 0 transcript_id "g102.t1"; gene_id "g102"; scaffold_8_4346366-4350924 AUGUSTUS CDS 3908 3959 0.99 + 1 transcript_id "g102.t1"; gene_id "g102"; scaffold_8_4346366-4350924 AUGUSTUS stop_codon 3957 3959 . + 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MAEFSPVLPMRDGGGRFGQPIFPRSRSGSESESELSQSLARTKIRSYGSTASVTASLGEKFIEHRVTDSDTLQGIALK # YGVTMEQIKRANKLFSNDCIFLRNSLNIPVASEKSSIFNGLSLESPDGEGAPNPLDHDPPRVTQDTEVPSPPQSPPPENSKKTSHSQPEELSAKDFLH # RLDLQIKQSKQAARRLKEEEVRDSDEEYTAPVSAYQEI] # end gene g102 ### # # ----- sequence number 99 (length = 4084, name = scaffold_8_5432056-5436139) ----- # # annotation: # Sequence scaffold_8_5432056-5436139 length=4084 scaffold_8_5432056-5436139 database start_codon 601 603 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 620 986 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 1164 1252 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 1373 1543 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 1627 1701 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 1787 1885 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 1944 2064 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 2199 2311 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 2362 2444 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 2619 3023 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database intron 3138 3343 . + . transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 601 619 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 987 1163 . + 2 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 1253 1372 . + 2 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 1544 1626 . + 2 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 1702 1786 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 1886 1943 . + 2 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 2065 2198 . + 1 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 2312 2361 . + 2 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 2445 2618 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 3024 3137 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database CDS 3344 3484 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; scaffold_8_5432056-5436139 database stop_codon 3482 3484 . + 0 transcript_id "g_2580-T1.1"; gene_id "g_2580-T1"; # Predicted genes for sequence number 99 on both strands # start gene g103 scaffold_8_5432056-5436139 AUGUSTUS gene 1025 3484 0.14 + . g103 scaffold_8_5432056-5436139 AUGUSTUS transcript 1025 3484 0.14 + . g103.t1 scaffold_8_5432056-5436139 AUGUSTUS start_codon 1025 1027 . + 0 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 1164 1252 0.84 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 1373 1543 0.8 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 1627 1701 0.72 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 1767 2064 0.66 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 2199 2311 1 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 2362 2444 1 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 2619 3023 0.72 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS intron 3138 3343 1 + . transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 1025 1163 0.31 + 0 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 1253 1372 1 + 2 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 1544 1626 0.74 + 2 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 1702 1766 0.61 + 0 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 2065 2198 1 + 1 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 2312 2361 1 + 2 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 2445 2618 1 + 0 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 3024 3137 0.72 + 0 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS CDS 3344 3484 1 + 0 transcript_id "g103.t1"; gene_id "g103"; scaffold_8_5432056-5436139 AUGUSTUS stop_codon 3482 3484 . + 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MDQPKSIFHFPETMPGDVLPGGYRVSTLKQLVAAQLPDSLPDPELIELVHCGRKLKDDLTLEACGIQPGSTLHILKKT # WPEPDIRPEPVNRATAAREFRVLQTTLHSNAVYRESVYKMLTNKESLDQIIIATPGLRLIASHPALVNAILLVLHSVAGSMPSQSSASSSRNVSSSSY # SDMPGGFMFEGMSDDDEDFQSGNQAGPASRAGGPAGRPVSLGHSGATGPRPITQSELATALALASTPESSAVTPTTGSQQDPSSGVPPMPAGTPVSNH # LFSQALQQALQASSMSSLQGRWQNQMQQLRDMGIQDEELMLRALQATDGDIHAALELIFAGGAGL] # end gene g103 ### # # ----- sequence number 100 (length = 3142, name = scaffold_8_6042231-6045372) ----- # # annotation: # Sequence scaffold_8_6042231-6045372 length=3142 scaffold_8_6042231-6045372 database start_codon 601 603 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database intron 664 1142 . + . transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database intron 1335 1445 . + . transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database intron 1521 1651 . + . transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database intron 1754 1845 . + . transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database intron 1999 2099 . + . transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database intron 2184 2449 . + . transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 601 663 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 1143 1334 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 1446 1520 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 1652 1753 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 1846 1998 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 2100 2183 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database CDS 2450 2542 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; scaffold_8_6042231-6045372 database stop_codon 2540 2542 . + 0 transcript_id "g_2583-T1.1"; gene_id "g_2583-T1"; # Predicted genes for sequence number 100 on both strands # start gene g104 scaffold_8_6042231-6045372 AUGUSTUS gene 601 2542 0.16 + . g104 scaffold_8_6042231-6045372 AUGUSTUS transcript 601 2542 0.16 + . g104.t1 scaffold_8_6042231-6045372 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS intron 664 1445 0.38 + . transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS intron 1521 1651 0.72 + . transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS intron 1754 1845 0.98 + . transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS intron 1999 2099 0.48 + . transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS intron 2184 2449 0.48 + . transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS CDS 601 663 0.82 + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS CDS 1446 1520 0.73 + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS CDS 1652 1753 0.98 + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS CDS 1846 1998 1 + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS CDS 2100 2183 0.48 + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS CDS 2450 2542 1 + 0 transcript_id "g104.t1"; gene_id "g104"; scaffold_8_6042231-6045372 AUGUSTUS stop_codon 2540 2542 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MGQCGITSSKTVLVFLNLIFWFAAILLLVFVTEVVVVVLGYIYRAKVEDEVNHSIKKVYDEYNGTNTDAPSRAIDYVQ # RQLRCCGIHNYADWRNTTWFKESKNNSVPVSCCKPNISNCTGTLTRPGDLYQEGCEALVVKKLKEIMMYVIWAALTFAAIQMLGMLCACVVLCRRSHD # PAYELLVTTNTYA] # end gene g104 ### # # ----- sequence number 101 (length = 2626, name = scaffold_8_8539390-8542015) ----- # # annotation: # Sequence scaffold_8_8539390-8542015 length=2626 scaffold_8_8539390-8542015 database start_codon 601 603 . + 0 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database intron 687 867 . + . transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database intron 982 1075 . + . transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database intron 1175 1285 . + . transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database intron 1416 1638 . + . transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database intron 1705 1918 . + . transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database CDS 601 686 . + 0 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database CDS 868 981 . + 1 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database CDS 1076 1174 . + 1 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database CDS 1286 1415 . + 1 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database CDS 1639 1704 . + 0 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database CDS 1919 2026 . + 0 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; scaffold_8_8539390-8542015 database stop_codon 2024 2026 . + 0 transcript_id "g_2591-T1.1"; gene_id "g_2591-T1"; # Predicted genes for sequence number 101 on both strands # start gene g105 scaffold_8_8539390-8542015 AUGUSTUS gene 1 2026 0.42 + . g105 scaffold_8_8539390-8542015 AUGUSTUS transcript 1 2026 0.42 + . g105.t1 scaffold_8_8539390-8542015 AUGUSTUS intron 1 1075 0.43 + . transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS intron 1175 1285 0.49 + . transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS intron 1416 1638 0.98 + . transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS intron 1705 1918 0.98 + . transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS CDS 1076 1174 0.47 + 1 transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS CDS 1286 1415 0.79 + 1 transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS CDS 1639 1704 0.98 + 0 transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS CDS 1919 2026 1 + 0 transcript_id "g105.t1"; gene_id "g105"; scaffold_8_8539390-8542015 AUGUSTUS stop_codon 2024 2026 . + 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [HYPPLPGQDTPLRWGGKKFEELPIAHIKATYNNTHIQVTDSEGQYMVRTSCGTEGFKNARKSTPIAAQTAGISAAAKA # TVKGVTFVRVSVKGLGPGRLSAIKGLSMGGLEVVSITDDTPVPHNGCRPRKARRI] # end gene g105 ### # # ----- sequence number 102 (length = 6763, name = scaffold_8_8849642-8856404) ----- # # annotation: # Sequence scaffold_8_8849642-8856404 length=6763 scaffold_8_8849642-8856404 database start_codon 601 603 . + 0 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 814 1049 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 1342 1520 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 1638 1775 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 1944 2039 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 2222 2455 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 2707 2949 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 3084 3211 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 3322 3490 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 3594 4320 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database intron 4567 5678 . + . transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 601 813 . + 0 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 1050 1341 . + 0 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 1521 1637 . + 2 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 1776 1943 . + 2 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 2040 2221 . + 2 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 2456 2706 . + 0 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 2950 3083 . + 1 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 3212 3321 . + 2 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 3491 3593 . + 0 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 4321 4566 . + 2 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database CDS 5679 6163 . + 2 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; scaffold_8_8849642-8856404 database stop_codon 6161 6163 . + 0 transcript_id "g_2594-T1.1"; gene_id "g_2594-T1"; # Predicted genes for sequence number 102 on both strands # start gene g106 scaffold_8_8849642-8856404 AUGUSTUS gene 1 6163 0.33 + . g106 scaffold_8_8849642-8856404 AUGUSTUS transcript 1 6163 0.33 + . g106.t1 scaffold_8_8849642-8856404 AUGUSTUS intron 1 600 0.59 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 814 1049 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 1342 1520 0.89 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 1638 1775 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 1944 2039 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 2222 2455 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 2707 2949 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 3084 3211 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 3322 3490 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 3594 4320 1 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 4605 5047 0.6 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS intron 5178 5678 0.7 + . transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 601 813 0.81 + 0 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 1050 1341 1 + 0 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 1521 1637 0.89 + 2 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 1776 1943 1 + 2 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 2040 2221 1 + 2 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 2456 2706 1 + 0 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 2950 3083 1 + 1 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 3212 3321 1 + 2 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 3491 3593 1 + 0 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 4321 4604 0.7 + 2 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 5048 5177 0.62 + 0 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS CDS 5679 6163 1 + 2 transcript_id "g106.t1"; gene_id "g106"; scaffold_8_8849642-8856404 AUGUSTUS stop_codon 6161 6163 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MMRQQAANGMSAPGLSMALLVLLSVFIVSMAELKGSKPAGPVLKRHKREWLWNSLYVEEERPAPVPYKIGQLRSTKVN # ERTHFEIVGEGVVGHNPPIFMVNENGDLFVTSKLDREQKSKYLLRAKLLDDRSNLVEREEDFVVLVTDINDNDPVFPPSFNASIRERSHRGTKVITAS # ATDADDPTTANAALRYTLLQGGDVFDIDSSTGLITTKYEPLDREGRSLYVLVVQAQDTWGKKQGGTATTSVTVTLTDINDNMASFTRKSYEFKVPENQ # KLDVKLGTLELEDRDELQNKDPIFTIAAPLNSKFDMERSPTKDGNLMLKQPLDYETQSSYTFSVDVRENNLQEPADNKNSAVTKAQVVIQVLDVDEPP # LFTKDIYTFSVIEETMVTNIGVVKARDPDRVNKTIRYSIEETDCPVGINPITGQLFTHRKLDRELRATYLIQVKAQEEPQGLASFVKVNLRVIDINDN # EPELSAEDVFVCENDMKNTVIGTIRATDKDEQTATFSFSLMEPSSNFSVIDNKDNTANILLKHGSFSVDDPLDYVLEIGINDGGRPAKSSVTSLPIRV # CRCDRNRIHTQCKAAHLKMGVSTPALIAILLCILTILGQSNSASLRHLVWMLSEKLVSWSKELQTLQQRLLSRADVWEKTGAEQRIRYAASLSIIVIL # FVLRKRYQKEALVSMGKNAEIHEQLVTYDEEGGGEMDTNGYDVSILTSARHDGSMMCQGPSLYAMVQRPPACKGDMAVMIEVKKDEADHDRDGIPYDT # LHIYGYEGPESLAGSLSSLDSSSTSSNMDYDFLQDWGPRFRPLAELYGVDGPDTYSPY] # end gene g106 ### # # ----- sequence number 103 (length = 3126, name = scaffold_8_9531484-9534609) ----- # # annotation: # Sequence scaffold_8_9531484-9534609 length=3126 scaffold_8_9531484-9534609 database start_codon 497 499 . + 0 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database intron 692 1263 . + . transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database intron 1636 1773 . + . transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database intron 1981 2141 . + . transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database intron 2275 2401 . + . transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database CDS 497 691 . + 0 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database CDS 1264 1635 . + 0 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database CDS 1774 1980 . + 0 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database CDS 2142 2274 . + 0 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database CDS 2402 2526 . + 2 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; scaffold_8_9531484-9534609 database stop_codon 2524 2526 . + 0 transcript_id "g_2602-T1.1"; gene_id "g_2602-T1"; # Predicted genes for sequence number 103 on both strands # start gene g107 scaffold_8_9531484-9534609 AUGUSTUS gene 497 2526 0.95 + . g107 scaffold_8_9531484-9534609 AUGUSTUS transcript 497 2526 0.95 + . g107.t1 scaffold_8_9531484-9534609 AUGUSTUS start_codon 497 499 . + 0 transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS intron 692 1263 1 + . transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS intron 1636 1773 1 + . transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS intron 1981 2141 0.98 + . transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS intron 2275 2401 0.96 + . transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS CDS 497 691 1 + 0 transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS CDS 1264 1635 1 + 0 transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS CDS 1774 1980 0.98 + 0 transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS CDS 2142 2274 0.96 + 0 transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS CDS 2402 2526 1 + 2 transcript_id "g107.t1"; gene_id "g107"; scaffold_8_9531484-9534609 AUGUSTUS stop_codon 2524 2526 . + 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MDPNTTILRVKRKRGTDPADALLLACKRIRPEGNDQQTPGETVPEPDDTEVENSVFKLVATVASQDAPVQTQVREALA # RPRVAHALRPSATSSQRIMGDLRSTKWSTRRDERYRILSSHRAGLPTERPAPASSPAPAPAPAPVPPLAQIEVPGWGKRMGLGGSEADWNLGQVQVFD # LIQEEAEPQDKGKVVTSDPEEIMCNSMKMIREHLSVSGEGLGAEHREREDDYVYDLYYQETAAPGWIQDILSVRAYTDEGELVPELVVHEEEVYEDED # DENEEGNWRNDYPDEDSDEDGDREERYGGYWEEEHSYSRRSWETYQREILSELGNHNNNEEEDEDRDSD] # end gene g107 ### # # ----- sequence number 104 (length = 4072, name = scaffold_8_11302708-11306779) ----- # # annotation: # Sequence scaffold_8_11302708-11306779 length=4072 scaffold_8_11302708-11306779 database start_codon 601 603 . + 0 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database intron 660 1089 . + . transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database intron 1205 1324 . + . transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database intron 1424 2171 . + . transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database intron 2361 2499 . + . transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database intron 2556 2657 . + . transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database intron 2781 3201 . + . transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 601 659 . + 0 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 1090 1204 . + 1 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 1325 1423 . + 0 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 2172 2360 . + 0 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 2500 2555 . + 0 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 2658 2780 . + 1 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database CDS 3202 3472 . + 1 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; scaffold_8_11302708-11306779 database stop_codon 3470 3472 . + 0 transcript_id "g_2622-T1.1"; gene_id "g_2622-T1"; # Predicted genes for sequence number 104 on both strands # start gene g108 scaffold_8_11302708-11306779 AUGUSTUS gene 2118 3472 0.1 + . g108 scaffold_8_11302708-11306779 AUGUSTUS transcript 2118 3472 0.1 + . g108.t1 scaffold_8_11302708-11306779 AUGUSTUS start_codon 2118 2120 . + 0 transcript_id "g108.t1"; gene_id "g108"; scaffold_8_11302708-11306779 AUGUSTUS intron 2357 2657 0.36 + . transcript_id "g108.t1"; gene_id "g108"; scaffold_8_11302708-11306779 AUGUSTUS intron 2781 3201 0.51 + . transcript_id "g108.t1"; gene_id "g108"; scaffold_8_11302708-11306779 AUGUSTUS CDS 2118 2356 0.17 + 0 transcript_id "g108.t1"; gene_id "g108"; scaffold_8_11302708-11306779 AUGUSTUS CDS 2658 2780 0.62 + 1 transcript_id "g108.t1"; gene_id "g108"; scaffold_8_11302708-11306779 AUGUSTUS CDS 3202 3472 0.53 + 1 transcript_id "g108.t1"; gene_id "g108"; scaffold_8_11302708-11306779 AUGUSTUS stop_codon 3470 3472 . + 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MTVGFRALCTYSAVSSHQLIERSPRSLPRSAVYLCIITFVMGASIHLVGDSINHRLILSGYQLHLSVRENPIIKDLKP # TTYIPFFLILFLYFTGCFTQIKEEKKMPLSGWLLLWPSALYYWYLVTEGQIFELFLFTFLAMGAFVLHRWQKGSNLDGNGEFLFYSFSLTMVLVAVWV # TYLWNDPVLRKKYPGLMYVPEPWSYYTLYIKDSH] # end gene g108 ### # # ----- sequence number 105 (length = 2606, name = scaffold_8_11810277-11812882) ----- # # annotation: # Sequence scaffold_8_11810277-11812882 length=2606 scaffold_8_11810277-11812882 database start_codon 601 603 . + 0 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database intron 705 826 . + . transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database intron 950 1103 . + . transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database intron 1249 1496 . + . transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database intron 1596 1844 . + . transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database CDS 601 704 . + 0 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database CDS 827 949 . + 1 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database CDS 1104 1248 . + 1 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database CDS 1497 1595 . + 0 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database CDS 1845 2006 . + 0 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; scaffold_8_11810277-11812882 database stop_codon 2004 2006 . + 0 transcript_id "g_2629-T1.1"; gene_id "g_2629-T1"; # Predicted genes for sequence number 105 on both strands # start gene g109 scaffold_8_11810277-11812882 AUGUSTUS gene 1 2006 1 + . g109 scaffold_8_11810277-11812882 AUGUSTUS transcript 1 2006 1 + . g109.t1 scaffold_8_11810277-11812882 AUGUSTUS intron 112 253 1 + . transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS intron 373 504 1 + . transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS intron 705 826 1 + . transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS intron 950 1103 1 + . transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS intron 1249 1496 1 + . transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS intron 1596 1844 1 + . transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 1 111 1 + 2 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 254 372 1 + 2 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 505 704 1 + 0 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 827 949 1 + 1 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 1104 1248 1 + 1 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 1497 1595 1 + 0 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS CDS 1845 2006 1 + 0 transcript_id "g109.t1"; gene_id "g109"; scaffold_8_11810277-11812882 AUGUSTUS stop_codon 2004 2006 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [EIGLGTPAQPFTVVFDTGSSNLWVPSVHCSFTDIACLLHHKYNSAKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIG # DLSIEKQVFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVDPVFDNIMSQKKVEQNIFSFYLNRNPDTEPGGELLLGGTDPKYYSGDFHYINISRQA # YWQIRMDSMDVGSQLGLCKSGCEAIVDTGTSLITGPSAEVKALQKAIGATPLIQGEYMVNCDKIPTLPIITFNVGGQAYSLTGEQYVLKETQAGKTIC # LSGFMGLDIPAPAGPLWILGDVFIGQYYTVFDRDNDRVGFAKSK] # end gene g109 ### # # ----- sequence number 106 (length = 2683, name = scaffold_8_16729276-16731958) ----- # # annotation: # Sequence scaffold_8_16729276-16731958 length=2683 scaffold_8_16729276-16731958 database start_codon 601 603 . + 0 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database intron 790 1287 . + . transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database intron 1417 1644 . + . transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database intron 1672 1856 . + . transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database intron 1886 1992 . + . transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database CDS 601 789 . + 0 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database CDS 1288 1416 . + 0 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database CDS 1645 1671 . + 0 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database CDS 1857 1885 . + 0 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database CDS 1993 2083 . + 1 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; scaffold_8_16729276-16731958 database stop_codon 2081 2083 . + 0 transcript_id "g_2651-T1.1"; gene_id "g_2651-T1"; # Predicted genes for sequence number 106 on both strands # start gene g110 scaffold_8_16729276-16731958 AUGUSTUS gene 601 2083 0.69 + . g110 scaffold_8_16729276-16731958 AUGUSTUS transcript 601 2083 0.69 + . g110.t1 scaffold_8_16729276-16731958 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS intron 790 1287 1 + . transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS intron 1417 1856 0.69 + . transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS intron 1886 1992 0.97 + . transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS CDS 601 789 1 + 0 transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS CDS 1288 1416 1 + 0 transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS CDS 1857 1885 0.97 + 0 transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS CDS 1993 2083 0.97 + 1 transcript_id "g110.t1"; gene_id "g110"; scaffold_8_16729276-16731958 AUGUSTUS stop_codon 2081 2083 . + 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MGEEINDNTINSADNISSNDEKTSSDNSVTYYTLEDIRSHNTSKNTWLIIHEKVYDITSFLEEHPGGEEVLLEQAGAD # ATESFEDVGHSTDAREMLQQYYLGELHMEEHISSSESSSWTTWLIPAMAAAVVGIMYRYYLLEHKSS] # end gene g110 ### # # ----- sequence number 107 (length = 4179, name = scaffold_8_17792047-17796225) ----- # # annotation: # Sequence scaffold_8_17792047-17796225 length=4179 scaffold_8_17792047-17796225 database start_codon 601 603 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 689 808 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 990 1229 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 1318 1692 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 1777 1865 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 1977 2173 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 2357 2455 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 2567 3163 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database intron 3213 3403 . + . transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 601 688 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 809 989 . + 2 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 1230 1317 . + 1 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 1693 1776 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 1866 1976 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 2174 2356 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 2456 2566 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 3164 3212 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database CDS 3404 3579 . + 2 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; scaffold_8_17792047-17796225 database stop_codon 3577 3579 . + 0 transcript_id "g_2654-T1.1"; gene_id "g_2654-T1"; # Predicted genes for sequence number 107 on both strands # start gene g111 scaffold_8_17792047-17796225 AUGUSTUS gene 1 3579 0.31 + . g111 scaffold_8_17792047-17796225 AUGUSTUS transcript 1 3579 0.31 + . g111.t1 scaffold_8_17792047-17796225 AUGUSTUS intron 1 808 0.45 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 990 1229 1 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 1318 1692 0.95 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 1777 1865 0.95 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 1977 2173 0.99 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 2357 2455 1 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 2567 3163 0.74 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS intron 3213 3403 0.93 + . transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 809 989 1 + 2 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 1230 1317 1 + 1 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 1693 1776 0.95 + 0 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 1866 1976 0.99 + 0 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 2174 2356 1 + 0 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 2456 2566 0.74 + 0 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 3164 3212 0.92 + 0 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS CDS 3404 3579 1 + 2 transcript_id "g111.t1"; gene_id "g111"; scaffold_8_17792047-17796225 AUGUSTUS stop_codon 3577 3579 . + 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [ELAQKARKEIADYLSSGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDPGLQEAVSTLIWAAP # RLQSEVSELKIVSDQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDAMVRPEVCPGEEADLIDVDTDNKKPR # GGGGGGGGGFTAGAMPMPMPMPMPMPMHSAFNYPTPKGAEPFSGPVGTYEGFNNFQPPMRGGPPPELPSCPPTYESIDDLSIKPSATPSQVLGPTHPG # PAPHVYDNNALPELPSVPDTLPTSSFGGNAATSDDIDFDDLSRRFEELKKKT] # end gene g111 ### # # ----- sequence number 108 (length = 3885, name = scaffold_8_17836787-17840671) ----- # # annotation: # Sequence scaffold_8_17836787-17840671 length=3885 scaffold_8_17836787-17840671 database start_codon 601 603 . + 0 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database intron 624 1012 . + . transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database intron 1102 2170 . + . transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database intron 2443 2548 . + . transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database intron 2872 3041 . + . transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database CDS 601 623 . + 0 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database CDS 1013 1101 . + 1 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database CDS 2171 2442 . + 2 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database CDS 2549 2871 . + 0 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database CDS 3042 3285 . + 1 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; scaffold_8_17836787-17840671 database stop_codon 3283 3285 . + 0 transcript_id "g_2656-T1.1"; gene_id "g_2656-T1"; # Predicted genes for sequence number 108 on both strands # start gene g112 scaffold_8_17836787-17840671 AUGUSTUS gene 1 3285 0.37 + . g112 scaffold_8_17836787-17840671 AUGUSTUS transcript 1 3285 0.37 + . g112.t1 scaffold_8_17836787-17840671 AUGUSTUS intron 1 1012 0.62 + . transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS intron 1102 2170 0.97 + . transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS intron 2443 2548 0.99 + . transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS intron 2872 3041 0.61 + . transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS CDS 1013 1101 0.99 + 1 transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS CDS 2171 2442 0.96 + 2 transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS CDS 2549 2871 0.56 + 0 transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS CDS 3042 3285 0.66 + 1 transcript_id "g112.t1"; gene_id "g112"; scaffold_8_17836787-17840671 AUGUSTUS stop_codon 3283 3285 . + 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [LSLATLLLASCVCLADEALAEHRIKHYASGLASLRSRRMVGGTLAPLVPWQAMVSLEVVNGSYAGGALIAPNWVLTAG # RNLFVKKNRIDTQGTEPVIPKVYLGITGRPQANASKEVAVQKVFLHPGFQNHSDWDNNLALIQLKAPVVLGPNVYPIPLPELGQNLADSQGKVGVIAG # WGWGVLLTPAQSLKHLVLPLADDISCTMGNGGRLLYSRPTVDETMFCTGPSRYQENVCFGDAGGALVVRAHSDVYAAGILSFDKVCSTEKYAIYMKLS # HYLSWIHGVLRGDNEESASRRTTVVSEMHSWQQS] # end gene g112 ### # # ----- sequence number 109 (length = 2372, name = scaffold_8_18252354-18254725) ----- # # annotation: # Sequence scaffold_8_18252354-18254725 length=2372 scaffold_8_18252354-18254725 database start_codon 601 603 . + 0 transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database intron 628 1015 . + . transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database intron 1240 1381 . + . transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database intron 1492 1641 . + . transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database CDS 601 627 . + 0 transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database CDS 1016 1239 . + 0 transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database CDS 1382 1491 . + 1 transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database CDS 1642 1772 . + 2 transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; scaffold_8_18252354-18254725 database stop_codon 1770 1772 . + 0 transcript_id "g_2661-T1.1"; gene_id "g_2661-T1"; # Predicted genes for sequence number 109 on both strands # start gene g113 scaffold_8_18252354-18254725 AUGUSTUS gene 1016 1772 0.66 + . g113 scaffold_8_18252354-18254725 AUGUSTUS transcript 1016 1772 0.66 + . g113.t1 scaffold_8_18252354-18254725 AUGUSTUS start_codon 1016 1018 . + 0 transcript_id "g113.t1"; gene_id "g113"; scaffold_8_18252354-18254725 AUGUSTUS intron 1240 1381 0.97 + . transcript_id "g113.t1"; gene_id "g113"; scaffold_8_18252354-18254725 AUGUSTUS intron 1492 1641 0.74 + . transcript_id "g113.t1"; gene_id "g113"; scaffold_8_18252354-18254725 AUGUSTUS CDS 1016 1239 0.89 + 0 transcript_id "g113.t1"; gene_id "g113"; scaffold_8_18252354-18254725 AUGUSTUS CDS 1382 1491 0.98 + 1 transcript_id "g113.t1"; gene_id "g113"; scaffold_8_18252354-18254725 AUGUSTUS CDS 1642 1772 0.74 + 2 transcript_id "g113.t1"; gene_id "g113"; scaffold_8_18252354-18254725 AUGUSTUS stop_codon 1770 1772 . + 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MVRGVFQASWRPEVTGLLTARAYRGEAPEDSKGDLIEIPLPPWTEKVGETVDIKRRRLLYESRKRGMLENCILLSLFS # KQYLNTMSETQLQQYDRLINEPSNDWDIYYWATEAHPTPEVYDGEVMDMLKEFTKNRNQEQRLDAPNLEYLDKNSQ] # end gene g113 ### # # ----- sequence number 110 (length = 6320, name = scaffold_9_539026-545345) ----- # # annotation: # Sequence scaffold_9_539026-545345 length=6320 scaffold_9_539026-545345 database start_codon 601 603 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 649 864 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 903 1111 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 1208 1481 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 1565 1873 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 1971 2570 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 2668 3229 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 3281 3635 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 3722 3804 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 3851 3949 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 4012 5304 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database intron 5395 5665 . + . transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 601 648 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 865 902 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 1112 1207 . + 1 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 1482 1564 . + 1 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 1874 1970 . + 2 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 2571 2667 . + 1 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 3230 3280 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 3636 3721 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 3805 3850 . + 1 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 3950 4011 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 5305 5394 . + 1 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database CDS 5666 5720 . + 1 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; scaffold_9_539026-545345 database stop_codon 5718 5720 . + 0 transcript_id "g_2672-T1.1"; gene_id "g_2672-T1"; # Predicted genes for sequence number 110 on both strands # start gene g114 scaffold_9_539026-545345 AUGUSTUS gene 601 5720 0.11 + . g114 scaffold_9_539026-545345 AUGUSTUS transcript 601 5720 0.11 + . g114.t1 scaffold_9_539026-545345 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 649 864 0.98 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 903 1111 1 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 1208 1481 0.99 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 1565 1873 1 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 1971 2570 1 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 2668 3229 1 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 3281 3635 0.84 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 3722 3804 0.64 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 3851 3949 0.86 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 4012 4596 0.23 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 4729 5304 0.37 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS intron 5395 5665 0.99 + . transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 601 648 0.75 + 0 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 865 902 1 + 0 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 1112 1207 1 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 1482 1564 0.99 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 1874 1970 1 + 2 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 2571 2667 1 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 3230 3280 1 + 0 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 3636 3721 0.66 + 0 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 3805 3850 0.61 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 3950 4011 0.58 + 0 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 4597 4728 0.24 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 5305 5394 0.96 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS CDS 5666 5720 0.88 + 1 transcript_id "g114.t1"; gene_id "g114"; scaffold_9_539026-545345 AUGUSTUS stop_codon 5718 5720 . + 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MASSCRRPEHMAPPEVYYNEEEAKKYSQNSRMIEIQSQMSERAVELLNLPEDQPCYLLDVGCGSGLSGDFLSEEGHFW # VGVDISTAMLDVALEREVEGDLLLGDMGQGIPFRPGTFDGCISISALQWLCNADKKSHSPPRRMYTFFSTLYSSLSRGARAVFQLYPENSEQLELITS # QAMKAGFSGGMVVDYPNSSKAKKFFLCLFAGVSGVLPKGLGSETVDRGVSSQVQFTGQRQTPPSGQTDSSPWSLVRQAPPSCQTGSSPWSLVRQAPPP # GPGLXSRFRNMKGKSAKKGKDWILEKKERRRRQGREVRADTKYTGRQRKPHF] # end gene g114 ### # # ----- sequence number 111 (length = 2999, name = scaffold_9_4903006-4906004) ----- # # annotation: # Sequence scaffold_9_4903006-4906004 length=2999 scaffold_9_4903006-4906004 database start_codon 601 603 . + 0 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database intron 683 985 . + . transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database intron 1045 1209 . + . transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database intron 1257 1346 . + . transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database intron 1439 1859 . + . transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database intron 1885 2356 . + . transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database CDS 601 682 . + 0 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database CDS 986 1044 . + 2 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database CDS 1210 1256 . + 0 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database CDS 1347 1438 . + 1 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database CDS 1860 1884 . + 2 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database CDS 2357 2399 . + 1 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; scaffold_9_4903006-4906004 database stop_codon 2397 2399 . + 0 transcript_id "g_2679-T1.1"; gene_id "g_2679-T1"; # Predicted genes for sequence number 111 on both strands # start gene g115 scaffold_9_4903006-4906004 AUGUSTUS gene 1 2498 0.58 + . g115 scaffold_9_4903006-4906004 AUGUSTUS transcript 1 2498 0.58 + . g115.t1 scaffold_9_4903006-4906004 AUGUSTUS intron 1 621 0.82 + . transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS intron 683 985 1 + . transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS intron 1045 1209 1 + . transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS intron 1257 1346 1 + . transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS intron 1439 1859 0.9 + . transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS intron 1885 2473 0.71 + . transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS CDS 622 682 0.88 + 0 transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS CDS 986 1044 1 + 2 transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS CDS 1210 1256 1 + 0 transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS CDS 1347 1438 0.99 + 1 transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS CDS 1860 1884 0.9 + 2 transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS CDS 2474 2498 0.7 + 1 transcript_id "g115.t1"; gene_id "g115"; scaffold_9_4903006-4906004 AUGUSTUS stop_codon 2496 2498 . + 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [PKMTPQEKLKLRMQKALNRQSKADKRAAQVKIQQQENKRQEREGELRAMARKIRMKERERREKERDEWEKQYGRQSRS # PSPSPSKYSRDYSSSRSRVLKAER] # end gene g115 ### # # ----- sequence number 112 (length = 7121, name = scaffold_9_5373370-5380490) ----- # # annotation: # Sequence scaffold_9_5373370-5380490 length=7121 scaffold_9_5373370-5380490 database start_codon 601 603 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 662 1782 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 2025 2862 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 3011 3208 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 3331 3432 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 3499 3607 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 3707 4879 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 4986 5091 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 5235 5329 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 5418 5502 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 5544 5650 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 5830 6256 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database intron 6339 6458 . + . transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 601 661 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 1783 2024 . + 2 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 2863 3010 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 3209 3330 . + 2 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 3433 3498 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 3608 3706 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 4880 4985 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 5092 5234 . + 2 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 5330 5417 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 5503 5543 . + 2 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 5651 5829 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 6257 6338 . + 1 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database CDS 6459 6521 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; scaffold_9_5373370-5380490 database stop_codon 6519 6521 . + 0 transcript_id "g_2746-T1.1"; gene_id "g_2746-T1"; # Predicted genes for sequence number 112 on both strands # start gene g116 scaffold_9_5373370-5380490 AUGUSTUS gene 568 6521 0.54 + . g116 scaffold_9_5373370-5380490 AUGUSTUS transcript 568 6521 0.54 + . g116.t1 scaffold_9_5373370-5380490 AUGUSTUS start_codon 568 570 . + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 662 1782 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 2025 2862 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 3011 3208 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 3331 3607 0.65 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 3707 4879 0.89 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 4986 5091 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 5235 5329 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 5418 5502 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 5544 5650 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 5830 6256 0.92 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS intron 6339 6458 1 + . transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 568 661 0.95 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 1783 2024 1 + 2 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 2863 3010 1 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 3209 3330 1 + 2 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 3608 3706 0.99 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 4880 4985 0.9 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 5092 5234 1 + 2 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 5330 5417 1 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 5503 5543 1 + 2 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 5651 5829 1 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 6257 6338 0.92 + 1 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS CDS 6459 6521 1 + 0 transcript_id "g116.t1"; gene_id "g116"; scaffold_9_5373370-5380490 AUGUSTUS stop_codon 6519 6521 . + 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MAHDTESGREKMAEGDNNAEKLKEKANTYFKEKDYDNAIKYYSEALELNPGNAIYFSNRSLAYLRTECYGYALADATR # ALEIDKNYIKGYYRRATSNMALGKFKAALKDYETVVRVRPNDKDAKMKYQECNKIVKQKAFERAIASDEIKRSVVDSLDIENMMIEDDYTGPKLEEGK # VTLKFMKEMMEWFKDQKKLHRKCAYQTEKISICGDTHGQYYDLLNIFELNGLPSQTNPYLFNGDFVDRGSFSVEVILTLFGFKLLLPDSFYLLRGNHE # TDNMNQMYGFEGEVKAKYTAQMFQLFSEVFQWLPLAQCINSKVLVMHGGLFSEDGVTLEDLRKIERNRQPPDSGPMCDLLWSDPQPQNGRSVSKRGVS # CQFGPDVTERFLDQNKLDYIVRSHEVKAEGYEITHSGKCITVFSAPNYCDQMGNKGAYIHLRGSDLKPEFHQFTAVPHPNVKPMAYANTLMQMGMM] # end gene g116 ### # # ----- sequence number 113 (length = 2814, name = scaffold_9_5471941-5474754) ----- # # annotation: # Sequence scaffold_9_5471941-5474754 length=2814 scaffold_9_5471941-5474754 database start_codon 601 603 . + 0 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database intron 640 1193 . + . transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database intron 1278 1370 . + . transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database intron 1532 1805 . + . transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database intron 1941 2027 . + . transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database CDS 601 639 . + 0 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database CDS 1194 1277 . + 0 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database CDS 1371 1531 . + 0 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database CDS 1806 1940 . + 1 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database CDS 2028 2214 . + 1 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; scaffold_9_5471941-5474754 database stop_codon 2212 2214 . + 0 transcript_id "g_2686-T1.1"; gene_id "g_2686-T1"; # Predicted genes for sequence number 113 on both strands # start gene g117 scaffold_9_5471941-5474754 AUGUSTUS gene 1816 2214 0.84 + . g117 scaffold_9_5471941-5474754 AUGUSTUS transcript 1816 2214 0.84 + . g117.t1 scaffold_9_5471941-5474754 AUGUSTUS start_codon 1816 1818 . + 0 transcript_id "g117.t1"; gene_id "g117"; scaffold_9_5471941-5474754 AUGUSTUS intron 1941 2027 1 + . transcript_id "g117.t1"; gene_id "g117"; scaffold_9_5471941-5474754 AUGUSTUS CDS 1816 1940 0.84 + 0 transcript_id "g117.t1"; gene_id "g117"; scaffold_9_5471941-5474754 AUGUSTUS CDS 2028 2214 1 + 1 transcript_id "g117.t1"; gene_id "g117"; scaffold_9_5471941-5474754 AUGUSTUS stop_codon 2212 2214 . + 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MMGILTLYTSYKEKNIFLVAVEKDPTGMDPDHTWHLSSSLKRFDDQYTLRVSFTDGKTKRTRETEITKSVGAFFDENG # VLVMDQFEKSASKLHDTLAVDKKIK] # end gene g117 ### # # ----- sequence number 114 (length = 7764, name = scaffold_9_6270411-6278174) ----- # # annotation: # Sequence scaffold_9_6270411-6278174 length=7764 scaffold_9_6270411-6278174 database start_codon 601 603 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 733 865 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 938 1725 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 1828 1945 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 1992 2141 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 2239 2415 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 2530 2661 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 2754 3012 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 3107 3234 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 3317 3422 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 3591 3813 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 4018 4146 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 4282 4387 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 4625 4827 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 4957 5275 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 5480 5626 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 5867 5957 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 6171 6311 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database intron 6495 6630 . + . transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 601 732 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 866 937 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 1726 1827 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 1946 1991 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 2142 2238 . + 2 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 2416 2529 . + 1 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 2662 2753 . + 1 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 3013 3106 . + 2 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 3235 3316 . + 1 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 3423 3590 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 3814 4017 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 4147 4281 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 4388 4624 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 4828 4956 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 5276 5479 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 5627 5866 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 5958 6170 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 6312 6494 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database CDS 6631 7164 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; scaffold_9_6270411-6278174 database stop_codon 7162 7164 . + 0 transcript_id "g_2690-T1.1"; gene_id "g_2690-T1"; # Predicted genes for sequence number 114 on both strands # start gene g118 scaffold_9_6270411-6278174 AUGUSTUS gene 1 558 0.25 + . g118 scaffold_9_6270411-6278174 AUGUSTUS transcript 1 558 0.25 + . g118.t1 scaffold_9_6270411-6278174 AUGUSTUS intron 1 150 0.26 + . transcript_id "g118.t1"; gene_id "g118"; scaffold_9_6270411-6278174 AUGUSTUS CDS 151 558 0.25 + 0 transcript_id "g118.t1"; gene_id "g118"; scaffold_9_6270411-6278174 AUGUSTUS stop_codon 556 558 . + 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [ETDLSPPYQKRTPSFNWPLSRAALTSLGSACSSAPPPPPVCYGTEGRSRGWDPRTGSAIKHTLQFYVIQPRSTHKNIV # TKPPSSSDVASAPSVPPPSNPSPSYPAPSPTGTDTHEAAVLQMSHRRGLLRRCRRSR] # end gene g118 ### # start gene g119 scaffold_9_6270411-6278174 AUGUSTUS gene 601 7164 0.39 + . g119 scaffold_9_6270411-6278174 AUGUSTUS transcript 601 7164 0.39 + . g119.t1 scaffold_9_6270411-6278174 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 733 865 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 938 1725 0.59 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 1828 1945 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 1992 2141 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 2239 2415 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 2530 2661 0.92 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 2754 3012 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 3107 3234 0.95 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 3317 3422 0.95 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 3591 3813 0.89 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 4018 4146 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 4282 4387 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 4625 4827 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 4957 5275 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 5480 5626 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 5867 5957 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 6171 6311 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS intron 6495 6630 1 + . transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 601 732 0.95 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 866 937 0.59 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 1726 1827 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 1946 1991 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 2142 2238 1 + 2 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 2416 2529 0.92 + 1 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 2662 2753 1 + 1 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 3013 3106 1 + 2 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 3235 3316 0.95 + 1 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 3423 3590 0.86 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 3814 4017 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 4147 4281 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 4388 4624 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 4828 4956 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 5276 5479 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 5627 5866 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 5958 6170 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 6312 6494 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS CDS 6631 7164 1 + 0 transcript_id "g119.t1"; gene_id "g119"; scaffold_9_6270411-6278174 AUGUSTUS stop_codon 7162 7164 . + 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MPNSSRAGSLKDPEVSDLFFKEDPEKLFSDLREIGHGSFGAVYFAHDVRTTEVVAIKKMSYSGKQSNEKWQDIIKEVK # FLQRIQHPNSIEYKGCYLREHTAWLVMEYCLGSTSDVLEVHKKPLQEMEIAAITHGALEGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIA # SPANSFVGTPYWMAPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLESSEWTDYFRNFVDSCLQKFPQDRPNSEE # LLKHAFVQRERPDSVLMDLILRTKDAVRELDNLQYRKMKKILFHEALNGPAAEAPDEEEEPENSVGRTGTVNSVGSNQSIPSMSISASSQSSSVNSLT # DAGDDKSELDMMEGDHTVMSNSSVIHLKPEAETYPEESQAHSRPSEPMSPPVHTPRPKHHRNREHFATIRTASLVTRQMKEHEQDSELREQMSGYKRM # RRQHQKQLMGLENKLKSEMDEHRLRLDKELENQRNSFAQEMEKLIKKHQGAMEKDAKTFSNDEKKFQQHIQTQQKKELSSFLESQKREYKLRKEQLKE # ELNENQSTPKKEKQEWLSKQKENFQHFQAEEEANLLRRQRQYLELECRRFKRRILVARHNVEQDLVREELNKRQTQKDLEHAMLLRHHESMQELEFRQ # VNTIQKMRAELIRTQHLTELTNQQEYNKRRERELRRKHVMEVRQQPKSLKSKELQIKKQFQDTCKIQTRQYKALRNHLLESTPKSDHKGVLKRLKEEQ # TRKLAILAEQYDHTINEMLSTQALRLDEAQEAQYQVLRMQLQQELELLNAYQSKIKMQTDAQHERERKDLEQRVSLRRALLEQKIEEEMMSLQNERQE # RIRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSFPGAPGNWSHPQTPHQSGGSQGYHWGSGAAGGSHQGSHHHYHSSQGGSPMQQSWGQG # MQAGGAPQPWGHPSAGPLSSRVGGGLQNSPQALGRTGSGGRGEQAISRSTSVTSQISNGSHLSYT] # end gene g119 ### # # ----- sequence number 115 (length = 3472, name = scaffold_9_8163559-8167030) ----- # # annotation: # Sequence scaffold_9_8163559-8167030 length=3472 scaffold_9_8163559-8167030 database start_codon 601 603 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 640 871 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 941 1436 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 1539 1644 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 1778 1954 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 2116 2375 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 2447 2563 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database intron 2746 2849 . + . transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 601 639 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 872 940 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 1437 1538 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 1645 1777 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 1955 2115 . + 2 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 2376 2446 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 2564 2745 . + 1 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database CDS 2850 2872 . + 2 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; scaffold_9_8163559-8167030 database stop_codon 2870 2872 . + 0 transcript_id "g_2699-T1.1"; gene_id "g_2699-T1"; # Predicted genes for sequence number 115 on both strands # start gene g120 scaffold_9_8163559-8167030 AUGUSTUS gene 885 3078 0.26 + . g120 scaffold_9_8163559-8167030 AUGUSTUS transcript 885 3078 0.26 + . g120.t1 scaffold_9_8163559-8167030 AUGUSTUS start_codon 885 887 . + 0 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS intron 941 1436 0.47 + . transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS intron 1480 1644 0.62 + . transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS intron 1778 1954 0.99 + . transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS intron 2116 2375 1 + . transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS intron 2447 2563 1 + . transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS intron 2746 3067 0.67 + . transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 885 940 0.41 + 0 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 1437 1479 0.43 + 1 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 1645 1777 0.75 + 0 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 1955 2115 1 + 2 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 2376 2446 1 + 0 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 2564 2745 0.74 + 1 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS CDS 3068 3078 0.67 + 2 transcript_id "g120.t1"; gene_id "g120"; scaffold_9_8163559-8167030 AUGUSTUS stop_codon 3076 3078 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MVQVQTTTQKQLSTLPSFRGLSVMEISRLQAILKSTLYRLKKELNETVFKSVKLWMVIVCILILILVLILVSLALCTV # IHEDVDEKYDLASFTVPQHFNGSFKLPNQTFSAELLYTQSNKTQPLSSELQKKLSDVYQHSPALGRYFSMAEIEGFRNGSVVAKYRLSFLMPQEHDQL # KRFTLSREVVYNVLRQHLFDQEPEKDGMLYIEPASLKMEALP] # end gene g120 ### # # ----- sequence number 116 (length = 8337, name = scaffold_9_10911838-10920174) ----- # # annotation: # Sequence scaffold_9_10911838-10920174 length=8337 scaffold_9_10911838-10920174 database start_codon 601 603 . + 0 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 720 2025 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 2172 2310 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 2395 3387 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 3660 4261 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 4444 4562 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 4673 5575 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 5806 5932 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 6112 6501 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 6621 6731 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 6890 7001 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database intron 7138 7672 . + . transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 601 719 . + 0 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 2026 2171 . + 1 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 2311 2394 . + 2 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 3388 3659 . + 2 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 4262 4443 . + 0 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 4563 4672 . + 1 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 5576 5805 . + 2 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 5933 6111 . + 0 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 6502 6620 . + 1 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 6732 6889 . + 2 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 7002 7137 . + 0 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database CDS 7673 7737 . + 2 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; scaffold_9_10911838-10920174 database stop_codon 7735 7737 . + 0 transcript_id "g_2712-T1.1"; gene_id "g_2712-T1"; # Predicted genes for sequence number 116 on both strands # start gene g121 scaffold_9_10911838-10920174 AUGUSTUS gene 1 7737 0.73 + . g121 scaffold_9_10911838-10920174 AUGUSTUS transcript 1 7737 0.73 + . g121.t1 scaffold_9_10911838-10920174 AUGUSTUS intron 1 569 0.75 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 720 2025 0.99 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 2172 2310 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 2395 3387 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 3660 4261 0.99 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 4444 4562 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 4673 5036 0.98 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 5175 5575 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 5806 5932 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 6112 6501 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 6621 6731 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 6890 7001 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS intron 7138 7672 1 + . transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 570 719 0.96 + 1 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 2026 2171 1 + 1 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 2311 2394 1 + 2 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 3388 3659 1 + 2 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 4262 4443 0.99 + 0 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 4563 4672 1 + 1 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 5037 5174 0.98 + 2 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 5576 5805 1 + 2 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 5933 6111 1 + 0 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 6502 6620 1 + 1 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 6732 6889 1 + 2 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 7002 7137 1 + 0 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS CDS 7673 7737 1 + 2 transcript_id "g121.t1"; gene_id "g121"; scaffold_9_10911838-10920174 AUGUSTUS stop_codon 7735 7737 . + 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [QPQSAAGQTPMVSPRAETTPIPVPTQVRNYQRIKQNLSSSPTTTLYGSPRSGTVRRSNTSPMGFPKVGSGSPSSADNA # QTVGRRLSIGSSRPYSPSPLVGTIPEQLGHCCCGHPQGHESRSRSSSGGSPVPSSQLLGARLQSAPTLTDIYPSRQKLHKQLSDPIQPTASNYPPSHS # PQLGRPANLGTSPTKHLGSSPRSSDWLQKSPLPTIIGSPTKTISAPFKIPKTQASCNLMALADSPTPTKTLADARDICAHHCTPYPSGRQSAPEASRT # TFGRSVSTGRLSEQPVRITLGGQAYQGSTDSLNTERPMDTAPAGPCGLAQGGAVSPRTVLFTVGSPPNSSTPPTCSHLGTRPRTTSVGSNSSAGSLCS # TSGRVYVGSPPGMAIGTSPPGGSGGPGAEAGPSSLRYVPYGTSPPSLDGFITFEAPELPEETLMEREHTDTLMHLRMMLSFTDCVLEIAAVRAGGADL # GVSAASLYPPQESVVVDQISQLSKEWGQVEQLVLYMKAAQLLASSLHLAKAQIKSAKLNPSTAVKQVVKSLNERYKSCISLCRRLTDKLNHFFSDKQR # FVDEINSVTAEKLIYNHAVEMVQSAALDEMFQQTEDIAYRYNKAAMLLEGLSKILQDPADIDNVAKYKASVDRRISALCYCTVTLYE] # end gene g121 ### # # ----- sequence number 117 (length = 6871, name = scaffold_9_11043490-11050360) ----- # # annotation: # Sequence scaffold_9_11043490-11050360 length=6871 scaffold_9_11043490-11050360 database start_codon 601 603 . + 0 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 946 1470 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 1595 2943 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 3066 3955 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 4151 4838 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 5009 5102 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 5226 5362 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database intron 5462 6144 . + . transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 601 945 . + 0 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 1471 1594 . + 0 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 2944 3065 . + 2 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 3956 4150 . + 0 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 4839 5008 . + 0 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 5103 5225 . + 1 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 5363 5461 . + 1 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database CDS 6145 6271 . + 1 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; scaffold_9_11043490-11050360 database stop_codon 6269 6271 . + 0 transcript_id "g_2714-T1.1"; gene_id "g_2714-T1"; # Predicted genes for sequence number 117 on both strands # start gene g122 scaffold_9_11043490-11050360 AUGUSTUS gene 749 6271 0.49 + . g122 scaffold_9_11043490-11050360 AUGUSTUS transcript 749 6271 0.49 + . g122.t1 scaffold_9_11043490-11050360 AUGUSTUS start_codon 749 751 . + 0 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 752 1470 0.52 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 1595 2943 1 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 3066 3955 1 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 4151 4838 0.95 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 5009 5102 1 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 5226 5362 1 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS intron 5462 6144 1 + . transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 749 751 0.52 + 0 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 1471 1594 1 + 0 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 2944 3065 1 + 2 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 3956 4150 1 + 0 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 4839 5008 0.95 + 0 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 5103 5225 1 + 1 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 5363 5461 1 + 1 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS CDS 6145 6271 1 + 1 transcript_id "g122.t1"; gene_id "g122"; scaffold_9_11043490-11050360 AUGUSTUS stop_codon 6269 6271 . + 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MEVLQKEEQWRRKCEELQAQMLQLQGDNQELQSHLKGSQSQEDRAQRKEREVMLKLKEVVDKQRDELRAKQQEITSVS # KEVEALQEQLERFMKMNGELRHKQNIVQTQVKSAVERKADMEADLREKQKEIERLSSQLEKAHSLSAAEAGSPSMTQLDLTDKMIIDMKDPNRPCFTK # QEVRDILSERNELKANLFLVQEEVAYYQREILNDERCPGFLLDAMRSAIKKQRTVIKAKMLGIPVDDCSSDEEDKGPLFERGEAQTETDGIEEKPAES # RIKNLFGFLTRSGSSRSPSHQSATSSSWEIIVPEDTGAVTEPRHSP] # end gene g122 ### # # ----- sequence number 118 (length = 6215, name = scaffold_9_11685756-11691970) ----- # # annotation: # Sequence scaffold_9_11685756-11691970 length=6215 scaffold_9_11685756-11691970 database start_codon 601 603 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 650 1312 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 1395 2166 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 2258 2694 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 2819 2993 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 3113 3766 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 3881 4033 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 4154 4529 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 4745 4899 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 5084 5274 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database intron 5425 5576 . + . transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 601 649 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 1313 1394 . + 2 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 2167 2257 . + 1 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 2695 2818 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 2994 3112 . + 2 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 3767 3880 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 4034 4153 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 4530 4744 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 4900 5083 . + 1 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 5275 5424 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database CDS 5577 5615 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; scaffold_9_11685756-11691970 database stop_codon 5613 5615 . + 0 transcript_id "g_2719-T1.1"; gene_id "g_2719-T1"; # Predicted genes for sequence number 118 on both strands # start gene g123 scaffold_9_11685756-11691970 AUGUSTUS gene 1 5615 0.18 + . g123 scaffold_9_11685756-11691970 AUGUSTUS transcript 1 5615 0.18 + . g123.t1 scaffold_9_11685756-11691970 AUGUSTUS intron 1 1312 0.43 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 1395 2166 0.49 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 2258 2694 1 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 2750 2993 0.56 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 3113 3766 1 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 3881 4033 1 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 4154 4529 1 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 4745 4899 1 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 5084 5274 0.99 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS intron 5425 5576 1 + . transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 1313 1394 0.48 + 2 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 2167 2257 0.73 + 1 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 2695 2749 0.58 + 0 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 2994 3112 0.98 + 2 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 3767 3880 1 + 0 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 4034 4153 1 + 0 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 4530 4744 1 + 0 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 4900 5083 0.99 + 1 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 5275 5424 1 + 0 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS CDS 5577 5615 1 + 0 transcript_id "g123.t1"; gene_id "g123"; scaffold_9_11685756-11691970 AUGUSTUS stop_codon 5613 5615 . + 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [GCCGSDDKTYMVGGWAWAWCLVSNTQRITLEIMTLQPKCEDVETAEGVAITVTGVAQVKVMTDHDLLAVACEQFLGTL # TVEQIYQDRDQFAQLVREVAAPDVGRMGIEILSFTIKDVYDKLDYLSSLGKTQTASVQRDADIGVAEAERDAGIREAECKKEMMDVKFQADTKMADSK # RELELQKASFNQEVNTKKAEAQLAYELQAAKEQQKIRLEEIEIEVVQRKKQIIIEEKEIQRTEKELIAIVKRPAEAEAYKMQQLAEGQKVKRVLTAQA # EAEKIRKIGEAEALSIEAVGKAEAEKMRLKAEAYLQYGEAAKIALVLDALPKIAGKVAAPLSKTHEIVILSGEGNRVTGEVNRLLAELPVSVNALTGV # DLTKIPLLQKMTGAQA] # end gene g123 ### # # ----- sequence number 119 (length = 4864, name = scaffold_9_12453695-12458558) ----- # # annotation: # Sequence scaffold_9_12453695-12458558 length=4864 scaffold_9_12453695-12458558 database start_codon 601 603 . + 0 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database intron 721 1046 . + . transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database intron 1191 1824 . + . transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database intron 1922 3363 . + . transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database intron 3556 3865 . + . transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database intron 3939 4149 . + . transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database CDS 601 720 . + 0 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database CDS 1047 1190 . + 0 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database CDS 1825 1921 . + 0 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database CDS 3364 3555 . + 2 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database CDS 3866 3938 . + 2 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database CDS 4150 4264 . + 1 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; scaffold_9_12453695-12458558 database stop_codon 4262 4264 . + 0 transcript_id "g_2724-T1.1"; gene_id "g_2724-T1"; # Predicted genes for sequence number 119 on both strands # start gene g124 scaffold_9_12453695-12458558 AUGUSTUS gene 601 4264 0.68 + . g124 scaffold_9_12453695-12458558 AUGUSTUS transcript 601 4264 0.68 + . g124.t1 scaffold_9_12453695-12458558 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS intron 721 1046 1 + . transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS intron 1191 1824 1 + . transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS intron 1922 3363 0.82 + . transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS intron 3556 3865 1 + . transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS intron 3939 4149 0.99 + . transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS CDS 601 720 1 + 0 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS CDS 1047 1190 1 + 0 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS CDS 1825 1921 1 + 0 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS CDS 3364 3555 0.95 + 2 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS CDS 3866 3938 0.99 + 2 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS CDS 4150 4264 0.85 + 1 transcript_id "g124.t1"; gene_id "g124"; scaffold_9_12453695-12458558 AUGUSTUS stop_codon 4262 4264 . + 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MDGGVTVITNPTVAVRLTSTLSSFESNRRFNRGITIAEFKSKLEMVVGTPAAGMELQLFSTSDKFLQKLDNNEALLGS # YAVDDDCRIHVIDRSGAQIGEYSDLSKVEKFEITDDAYEKRTDSVRSFMKKQRVGRFNEEEMAKKEAELAALEKEEKAAAAAITVGDRCQVKVVGQPT # KIGTVMYVGNTDFKPGHWVGVKYDEPLGKHDGCVNGKRYFECENKYGAFVKPQTVTTGDFPEEDYELDEM] # end gene g124 ### # # ----- sequence number 120 (length = 2282, name = scaffold_9_15602883-15605164) ----- # # annotation: # Sequence scaffold_9_15602883-15605164 length=2282 scaffold_9_15602883-15605164 database start_codon 601 603 . + 0 transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database intron 685 795 . + . transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database intron 883 1010 . + . transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database intron 1093 1227 . + . transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database CDS 601 684 . + 0 transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database CDS 796 882 . + 0 transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database CDS 1011 1092 . + 0 transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database CDS 1228 1682 . + 2 transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; scaffold_9_15602883-15605164 database stop_codon 1680 1682 . + 0 transcript_id "g_2738-T1.1"; gene_id "g_2738-T1"; # Predicted genes for sequence number 120 on both strands # start gene g125 scaffold_9_15602883-15605164 AUGUSTUS gene 601 1682 0.96 + . g125 scaffold_9_15602883-15605164 AUGUSTUS transcript 601 1682 0.96 + . g125.t1 scaffold_9_15602883-15605164 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS intron 685 795 1 + . transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS intron 883 1010 1 + . transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS intron 1093 1227 0.96 + . transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS CDS 601 684 1 + 0 transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS CDS 796 882 1 + 0 transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS CDS 1011 1092 1 + 0 transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS CDS 1228 1682 0.96 + 2 transcript_id "g125.t1"; gene_id "g125"; scaffold_9_15602883-15605164 AUGUSTUS stop_codon 1680 1682 . + 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MAPSARPNKNGLCLDEDEYYGVNKGDRKTRKPLVEKKRRARINESLQELRTLLTETDLQSKMENAEVLEMTVKRVEHI # LKNRTQETESLNREASERFAAGYIQCMHEVHMFVSNCPGIDATVAAELLNHLLECMPLNEEHFQDMFMDLISDTSSNNSSTWPIGEALCAALASPGGR # SIGGLSSVLSPAPSSMEDLCSDLDDTDSEHNQSASEPSQNQEAQNIPTITYSKSMWRPW] # end gene g125 ### # # ----- sequence number 121 (length = 2038, name = scaffold_9_17742601-17744638) ----- # # annotation: # Sequence scaffold_9_17742601-17744638 length=2038 scaffold_9_17742601-17744638 database start_codon 601 603 . + 0 transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database intron 854 946 . + . transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database intron 1044 1195 . + . transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database intron 1296 1396 . + . transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database CDS 601 853 . + 0 transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database CDS 947 1043 . + 2 transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database CDS 1196 1295 . + 1 transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database CDS 1397 1438 . + 0 transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; scaffold_9_17742601-17744638 database stop_codon 1436 1438 . + 0 transcript_id "g_2744-T1.1"; gene_id "g_2744-T1"; # Predicted genes for sequence number 121 on both strands # start gene g126 scaffold_9_17742601-17744638 AUGUSTUS gene 1 1438 0.63 + . g126 scaffold_9_17742601-17744638 AUGUSTUS transcript 1 1438 0.63 + . g126.t1 scaffold_9_17742601-17744638 AUGUSTUS intron 1 225 0.91 + . transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS intron 341 598 1 + . transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS intron 854 946 1 + . transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS intron 1044 1195 1 + . transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS intron 1296 1396 0.67 + . transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS CDS 226 340 0.95 + 0 transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS CDS 599 853 1 + 2 transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS CDS 947 1043 1 + 2 transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS CDS 1196 1295 1 + 1 transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS CDS 1397 1438 0.67 + 0 transcript_id "g126.t1"; gene_id "g126"; scaffold_9_17742601-17744638 AUGUSTUS stop_codon 1436 1438 . + 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [DIGGEKGILEESQLTLVSLTDSTLQDQELTVTEEDEGALMLLEFQGPGEVLQLKRRALLQQRSTRRVEAIKARKAGGG # DQAKVWSKTQSQLTSVQVKRESKSLAGGDAKTQSKPPPKLPPALPVREAKLKKVREVRICTPEERKLDEAEMHQRTERLYNRLEEVKQLKEIRSRQEL # YSKNREKAKDFHKKTLLKLRAKQTPH] # end gene g126 ### # # ----- sequence number 122 (length = 4537, name = scaffold_10_673797-678333) ----- # # annotation: # Sequence scaffold_10_673797-678333 length=4537 scaffold_10_673797-678333 database start_codon 601 603 . + 0 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database intron 621 2421 . + . transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database intron 2453 3335 . + . transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database intron 3482 3603 . + . transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database intron 3696 3887 . + . transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database CDS 601 620 . + 0 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database CDS 2422 2452 . + 1 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database CDS 3336 3481 . + 0 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database CDS 3604 3695 . + 1 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database CDS 3888 3937 . + 2 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; scaffold_10_673797-678333 database stop_codon 3935 3937 . + 0 transcript_id "g_168-T1.1"; gene_id "g_168-T1"; # Predicted genes for sequence number 122 on both strands # (none) # # ----- sequence number 123 (length = 2315, name = scaffold_10_3038815-3041129) ----- # # annotation: # Sequence scaffold_10_3038815-3041129 length=2315 scaffold_10_3038815-3041129 database start_codon 601 603 . + 0 transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database intron 682 954 . + . transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database intron 1079 1292 . + . transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database intron 1412 1625 . + . transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database CDS 601 681 . + 0 transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database CDS 955 1078 . + 0 transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database CDS 1293 1411 . + 2 transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database CDS 1626 1715 . + 0 transcript_id "g_185-T1.1"; gene_id "g_185-T1"; scaffold_10_3038815-3041129 database stop_codon 1713 1715 . + 0 transcript_id "g_185-T1.1"; gene_id "g_185-T1"; # Predicted genes for sequence number 123 on both strands # start gene g127 scaffold_10_3038815-3041129 AUGUSTUS gene 1 1715 0.95 + . g127 scaffold_10_3038815-3041129 AUGUSTUS transcript 1 1715 0.95 + . g127.t1 scaffold_10_3038815-3041129 AUGUSTUS intron 1 590 1 + . transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS intron 682 954 1 + . transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS intron 1079 1292 1 + . transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS intron 1412 1625 0.95 + . transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS CDS 591 681 1 + 1 transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS CDS 955 1078 1 + 0 transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS CDS 1293 1411 0.95 + 2 transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS CDS 1626 1715 1 + 0 transcript_id "g127.t1"; gene_id "g127"; scaffold_10_3038815-3041129 AUGUSTUS stop_codon 1713 1715 . + 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [FANMSAHLQWMVIRNCSSFLIKRNGQTYSTEPNNLKSKNSFRFNGLVHRKTVGVQPAADGKGVVVVLKKRAGQRKPVS # SYEKITINKNSRATLNSLRHIIRKNNYRKDLRMAALRRASAILKSQKPVVVKKKRSRATKTA] # end gene g127 ### # # ----- sequence number 124 (length = 9571, name = scaffold_10_6055771-6065341) ----- # # annotation: # Sequence scaffold_10_6055771-6065341 length=9571 scaffold_10_6055771-6065341 database start_codon 601 603 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 664 951 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 1030 3090 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 3146 3720 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 3780 4074 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 4141 4417 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 4648 5002 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 5125 5249 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 5321 5888 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 5985 6264 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 6339 6435 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 6497 6642 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 6703 7035 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 7144 8041 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 8139 8572 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database intron 8646 8868 . + . transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 601 663 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 952 1029 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 3091 3145 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 3721 3779 . + 2 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 4075 4140 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 4418 4647 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 5003 5124 . + 1 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 5250 5320 . + 2 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 5889 5984 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 6265 6338 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 6436 6496 . + 1 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 6643 6702 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 7036 7143 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 8042 8138 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 8573 8645 . + 2 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database CDS 8869 8971 . + 1 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; scaffold_10_6055771-6065341 database stop_codon 8969 8971 . + 0 transcript_id "g_219-T1.1"; gene_id "g_219-T1"; # Predicted genes for sequence number 124 on both strands # start gene g128 scaffold_10_6055771-6065341 AUGUSTUS gene 1 8971 0.32 + . g128 scaffold_10_6055771-6065341 AUGUSTUS transcript 1 8971 0.32 + . g128.t1 scaffold_10_6055771-6065341 AUGUSTUS intron 1 465 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 664 951 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 1030 1119 0.6 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 1191 2542 0.45 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 2688 3090 0.8 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 3146 3720 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 3780 4074 0.98 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 4141 4417 0.99 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 4648 5002 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 5125 5249 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 5321 5888 0.96 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 5985 6264 0.92 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 6339 6435 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 6497 6642 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 6703 7035 0.97 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 7144 8041 0.93 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 8139 8572 0.99 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS intron 8646 8868 1 + . transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 466 663 1 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 952 1029 0.81 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 1120 1190 0.58 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 2543 2687 0.61 + 1 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 3091 3145 1 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 3721 3779 0.99 + 2 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 4075 4140 0.99 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 4418 4647 1 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 5003 5124 1 + 1 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 5250 5320 0.96 + 2 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 5889 5984 1 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 6265 6338 0.92 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 6436 6496 1 + 1 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 6643 6702 0.99 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 7036 7143 0.97 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 8042 8138 0.93 + 0 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 8573 8645 1 + 2 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS CDS 8869 8971 1 + 1 transcript_id "g128.t1"; gene_id "g128"; scaffold_10_6055771-6065341 AUGUSTUS stop_codon 8969 8971 . + 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [GASNIQVRRAVKDTLSNPQSPQPSPYSSPKAQHKPQQSFLPPGWEMRIAPNGRPFFIDHNSRATTWEDPRLKYPVHLR # TKASLDPGDLGPLPLPSSPPPPPPGLAPLLSTCSSSSSSTTSRSGPLEASKLSPQLHTASSDLLPHDELIDKGEQRKGGGSCRSDEPGWEERVHADGR # TFYIDHNTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSLKRPDILKARLWIEFESEKGLDYG # GVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDGFFIRPFYKMMLGKQISLKDMESVDSEYYNS # LKWILENDPTELDLRFSIDEDNFGQTYQVDLKPSGSDMLVTNDNKKEYIDLVIQWRFVNRVQKQMNAFLEGFTELILIDLIKIFDENELELLMCGLGD # VDVNDWRQHTVYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPTYETFD # DLREKLLMAVENAQGFEGVD] # end gene g128 ### # # ----- sequence number 125 (length = 5117, name = scaffold_10_6910917-6916033) ----- # # annotation: # Sequence scaffold_10_6910917-6916033 length=5117 scaffold_10_6910917-6916033 database start_codon 601 603 . + 0 transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database intron 950 1152 . + . transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database intron 1377 1871 . + . transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database intron 2066 2752 . + . transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database CDS 601 949 . + 0 transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database CDS 1153 1376 . + 2 transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database CDS 1872 2065 . + 0 transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database CDS 2753 4517 . + 1 transcript_id "g_222-T1.1"; gene_id "g_222-T1"; scaffold_10_6910917-6916033 database stop_codon 4515 4517 . + 0 transcript_id "g_222-T1.1"; gene_id "g_222-T1"; # Predicted genes for sequence number 125 on both strands # start gene g129 scaffold_10_6910917-6916033 AUGUSTUS gene 601 4517 0.94 + . g129 scaffold_10_6910917-6916033 AUGUSTUS transcript 601 4517 0.94 + . g129.t1 scaffold_10_6910917-6916033 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS intron 950 1152 0.98 + . transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS intron 1377 1871 1 + . transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS intron 2066 2752 1 + . transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS CDS 601 949 0.95 + 0 transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS CDS 1153 1376 1 + 2 transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS CDS 1872 2065 1 + 0 transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS CDS 2753 4517 0.99 + 1 transcript_id "g129.t1"; gene_id "g129"; scaffold_10_6910917-6916033 AUGUSTUS stop_codon 4515 4517 . + 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [MGRQRKRVVTGEAVPPLRKEEKPTALLRKDKKKKVDIGKVFINISIGLCIFSLVWFFYALYMRSSLAKRVVTLHPSSS # VLDPNSTSAQVAPERFWGSYRPQVYFGMKTRSPKSVVTGLMWLRQFADVDVNLRHTCEQGDRLQSYGWLMHDGLSFGIQEIRDSDFTLTTEFVKRLGG # DHGGDWTWRITAKQHSSAPHAPVISLMFYAAADTQGSLEAHTEEKNRLGSITGFSEELGNFKITFRKPVAGESSSVKYASYNYLQTVSPGLEKLTDIV # RNSLNRRFVYSPPSGNKRQYIAVDTYKPPHHQHQQKPDDPRKESDFVLHQVTVQTPFQIEVLFESGSFRNRPNQLVGTAMTEELEKRKAEFDVKFEKT # FGLQSKGFSQAQVKFSKAALSNMLGGLGYFFGQSVVQSVYNEYPLLYPEGTLFTAVPSRSFFPRGFLWDEGFHQLLLSKWDPQVTREVTAHWLDLINM # EGWIPREQILGDEARSKVPAEFVVQRNENANPPTLFLALQELVEQLSTNPESASVTLPFLRRLFPRLQTWFAWYNTTQTGPLPNSYRWRGRDKDTNLF # LNPKTLTSGLDDYPRASHPSLDERHVDLHCWMALASGIMASVARLLKEPHQEYEQTHLVLSDNHLLDELHWSDQLQAYCDYGNHTQAVVLQQEKVYVP # PGQPRHQFPVARLVRSVRRAPKLQYVNALGYVSLFPFLLRILAPDSPKLEHILNDMKDPEKLWTPYGLRSLSKSSPLYMMRNTEHDAPYWRGAIWINI # NYLAVRALHYYGNTESPYREKAAALYQDLRTNIINNVYRQYAETGYIWEQYNDSSGRGQGSHPFTGWSALTVLMMAEQY] # end gene g129 ### # # ----- sequence number 126 (length = 3702, name = scaffold_10_8748024-8751725) ----- # # annotation: # Sequence scaffold_10_8748024-8751725 length=3702 scaffold_10_8748024-8751725 database start_codon 601 603 . + 0 transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database intron 663 1026 . + . transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database intron 1130 2833 . + . transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database intron 2945 3093 . + . transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database CDS 601 662 . + 0 transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database CDS 1027 1129 . + 1 transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database CDS 2834 2944 . + 0 transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database CDS 3094 3102 . + 0 transcript_id "g_231-T1.1"; gene_id "g_231-T1"; scaffold_10_8748024-8751725 database stop_codon 3100 3102 . + 0 transcript_id "g_231-T1.1"; gene_id "g_231-T1"; # Predicted genes for sequence number 126 on both strands # start gene g130 scaffold_10_8748024-8751725 AUGUSTUS gene 1 3102 0.63 + . g130 scaffold_10_8748024-8751725 AUGUSTUS transcript 1 3102 0.63 + . g130.t1 scaffold_10_8748024-8751725 AUGUSTUS intron 68 215 1 + . transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS intron 387 552 1 + . transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS intron 663 1026 1 + . transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS intron 1130 2833 1 + . transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS intron 2945 3093 0.63 + . transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS CDS 1 67 1 + 1 transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS CDS 216 386 1 + 0 transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS CDS 553 662 1 + 0 transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS CDS 1027 1129 1 + 1 transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS CDS 2834 2944 0.88 + 0 transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS CDS 3094 3102 0.63 + 0 transcript_id "g130.t1"; gene_id "g130"; scaffold_10_8748024-8751725 AUGUSTUS stop_codon 3100 3102 . + 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [LPKAKIITLLINPSDRAYSWYQHQRAHEDHAALRFTFYDVISARRGAPAELRSLQSRCLTPGLYATHIERWLAHYPAN # QLLIIDGQQLRGDPAAVMGEVQKFLGVSPHFNYSQALTFDPQKGFWCQVLEGGKTKCLGKSKGRKYPPMETEARAYLSRYYREHNIDLSKLLHKLGQP # LPSWLREELQKVR] # end gene g130 ### # # ----- sequence number 127 (length = 8144, name = scaffold_10_8947891-8956034) ----- # # annotation: # Sequence scaffold_10_8947891-8956034 length=8144 scaffold_10_8947891-8956034 database start_codon 601 603 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 685 2466 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 2518 3434 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 3582 4199 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 4371 5076 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 5203 6404 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 6453 7007 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 7125 7269 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database intron 7332 7531 . + . transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 601 684 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 2467 2517 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 3435 3581 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 4200 4370 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 5077 5202 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 6405 6452 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 7008 7124 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 7270 7331 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database CDS 7532 7544 . + 1 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; scaffold_10_8947891-8956034 database stop_codon 7542 7544 . + 0 transcript_id "g_234-T1.1"; gene_id "g_234-T1"; # Predicted genes for sequence number 127 on both strands # start gene g131 scaffold_10_8947891-8956034 AUGUSTUS gene 1123 7876 0.15 + . g131 scaffold_10_8947891-8956034 AUGUSTUS transcript 1123 7876 0.15 + . g131.t1 scaffold_10_8947891-8956034 AUGUSTUS start_codon 1123 1125 . + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 1129 2466 0.33 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 2518 3434 0.92 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 3582 4199 1 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 4371 5076 1 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 5203 6404 1 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 6453 7007 1 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS intron 7125 7774 0.4 + . transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 1123 1128 0.36 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 2467 2517 0.93 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 3435 3581 1 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 4200 4370 1 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 5077 5202 1 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 6405 6452 1 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 7008 7124 1 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS CDS 7775 7876 0.41 + 0 transcript_id "g131.t1"; gene_id "g131"; scaffold_10_8947891-8956034 AUGUSTUS stop_codon 7874 7876 . + 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MQLLGVAFLGIGLWAWSEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENSFLLKFFSVFLGIIFF # LELTAGVLAFVFKDWIKDQLNFFINNNIRAYRDDIDLQNLIDFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAEDVINTQCG # YDIRAKADSEQRTSIYIKGCVPQFEKWLQDNLTVVAGIFIGIALLQFRSLEGIYKGRNLVVDTLELYRRTESAFPGMCI] # end gene g131 ### # # ----- sequence number 128 (length = 8444, name = scaffold_10_11065243-11073686) ----- # # annotation: # Sequence scaffold_10_11065243-11073686 length=8444 scaffold_10_11065243-11073686 database start_codon 601 603 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database intron 1087 3082 . + . transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database intron 3211 5312 . + . transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database intron 5512 6196 . + . transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database intron 6350 6534 . + . transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database intron 6669 7035 . + . transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database intron 7145 7706 . + . transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 601 1086 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 3083 3210 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 5313 5511 . + 1 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 6197 6349 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 6535 6668 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 7036 7144 . + 1 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database CDS 7707 7844 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; scaffold_10_11065243-11073686 database stop_codon 7842 7844 . + 0 transcript_id "g_248-T1.1"; gene_id "g_248-T1"; # Predicted genes for sequence number 128 on both strands # start gene g132 scaffold_10_11065243-11073686 AUGUSTUS gene 655 7844 0.8 + . g132 scaffold_10_11065243-11073686 AUGUSTUS transcript 655 7844 0.8 + . g132.t1 scaffold_10_11065243-11073686 AUGUSTUS start_codon 655 657 . + 0 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS intron 1087 3082 0.95 + . transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS intron 3211 5312 1 + . transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS intron 5512 6196 1 + . transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS intron 6350 6534 1 + . transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS intron 6669 7035 1 + . transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS intron 7145 7706 1 + . transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 655 1086 0.85 + 0 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 3083 3210 1 + 0 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 5313 5511 1 + 1 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 6197 6349 1 + 0 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 6535 6668 1 + 0 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 7036 7144 1 + 1 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS CDS 7707 7844 1 + 0 transcript_id "g132.t1"; gene_id "g132"; scaffold_10_11065243-11073686 AUGUSTUS stop_codon 7842 7844 . + 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [MATRATCETNATVDSLSGLYHHSSLHPLGFHSTSSPFLEPVPTKFHQENLGERPRAPASGPRMNSTIMRPPPCHKVTS # IKDYFKYINTVISIIVFVVGIVGNATLLRIIYQNKCMRNGPNALIASLALGDLIYITIDIPINVYKLLVSRFPFDESDFGLCLCKLVPFLQKASVGIT # VLNLCALSVDRYRAVASWSRVQGVGVPLLTAIEIISIWVLSLILAVPEAIGFNMVTFNFNNMTIRTCMLEPKSNFMKFYREIKDWWLFGFYFCVPLTC # TAVFYTLMTCEMLNRRKGSLRIALSEHLKQRREVAKAVFCLVLIFALCWFPLHLSRILKRTVYQQNDMDRCELLNFLLVLDYLSINLATVNSCINPII # LYFVSKKFKNCFKSCLCCWCHSENQVTSTGHMNGTSIQCKSPEPNNLNTDRSLRKDSD] # end gene g132 ### # # ----- sequence number 129 (length = 2766, name = scaffold_11_26889-29654) ----- # # annotation: # Sequence scaffold_11_26889-29654 length=2766 scaffold_11_26889-29654 database start_codon 601 603 . + 0 transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database intron 774 1096 . + . transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database intron 1138 1570 . + . transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database intron 1677 1937 . + . transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database CDS 601 773 . + 0 transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database CDS 1097 1137 . + 1 transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database CDS 1571 1676 . + 2 transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database CDS 1938 2166 . + 1 transcript_id "g_283-T1.1"; gene_id "g_283-T1"; scaffold_11_26889-29654 database stop_codon 2164 2166 . + 0 transcript_id "g_283-T1.1"; gene_id "g_283-T1"; # Predicted genes for sequence number 129 on both strands # (none) # # ----- sequence number 130 (length = 2302, name = scaffold_11_111143-113444) ----- # # annotation: # Sequence scaffold_11_111143-113444 length=2302 scaffold_11_111143-113444 database start_codon 601 603 . + 0 transcript_id "g_285-T1.1"; gene_id "g_285-T1"; scaffold_11_111143-113444 database intron 844 1084 . + . transcript_id "g_285-T1.1"; gene_id "g_285-T1"; scaffold_11_111143-113444 database CDS 601 843 . + 0 transcript_id "g_285-T1.1"; gene_id "g_285-T1"; scaffold_11_111143-113444 database CDS 1085 1702 . + 0 transcript_id "g_285-T1.1"; gene_id "g_285-T1"; scaffold_11_111143-113444 database stop_codon 1700 1702 . + 0 transcript_id "g_285-T1.1"; gene_id "g_285-T1"; # Predicted genes for sequence number 130 on both strands # start gene g133 scaffold_11_111143-113444 AUGUSTUS gene 728 1702 0.42 + . g133 scaffold_11_111143-113444 AUGUSTUS transcript 728 1702 0.42 + . g133.t1 scaffold_11_111143-113444 AUGUSTUS start_codon 728 730 . + 0 transcript_id "g133.t1"; gene_id "g133"; scaffold_11_111143-113444 AUGUSTUS intron 770 1084 0.58 + . transcript_id "g133.t1"; gene_id "g133"; scaffold_11_111143-113444 AUGUSTUS intron 1350 1433 0.78 + . transcript_id "g133.t1"; gene_id "g133"; scaffold_11_111143-113444 AUGUSTUS CDS 728 769 0.58 + 0 transcript_id "g133.t1"; gene_id "g133"; scaffold_11_111143-113444 AUGUSTUS CDS 1085 1349 0.83 + 0 transcript_id "g133.t1"; gene_id "g133"; scaffold_11_111143-113444 AUGUSTUS CDS 1434 1702 0.75 + 2 transcript_id "g133.t1"; gene_id "g133"; scaffold_11_111143-113444 AUGUSTUS stop_codon 1700 1702 . + 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MPREIFDWKRVKRLEESRIDVLINNAGIYQCPYSKTEDGFEMQFGVNHLGHFLLTHLLMDLLIKSAPSRIIVVSSKLY # KYGQINFEDLNSDNSYDKAFAYGRSIVRTNLGRHVRIPLLAKPLFHMASRVLFKSPKQGAETSVYLACSPDVEGVSGKCFADCKEQSLLPKATDEEVA # QKLWDISEVMVGITT] # end gene g133 ### # # ----- sequence number 131 (length = 3569, name = scaffold_11_4818548-4822116) ----- # # annotation: # Sequence scaffold_11_4818548-4822116 length=3569 scaffold_11_4818548-4822116 database start_codon 601 603 . + 0 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 740 857 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 949 1042 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 1171 1299 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 1380 1730 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 1918 2028 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 2094 2261 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 2299 2497 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database intron 2628 2851 . + . transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 601 739 . + 0 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 858 948 . + 2 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 1043 1170 . + 1 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 1300 1379 . + 2 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 1731 1917 . + 0 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 2029 2093 . + 2 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 2262 2298 . + 0 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 2498 2627 . + 2 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database CDS 2852 2969 . + 1 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; scaffold_11_4818548-4822116 database stop_codon 2967 2969 . + 0 transcript_id "g_310-T1.1"; gene_id "g_310-T1"; # Predicted genes for sequence number 131 on both strands # start gene g134 scaffold_11_4818548-4822116 AUGUSTUS gene 601 1952 0.68 + . g134 scaffold_11_4818548-4822116 AUGUSTUS transcript 601 1952 0.68 + . g134.t1 scaffold_11_4818548-4822116 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS intron 740 857 1 + . transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS intron 949 1042 1 + . transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS intron 1171 1299 1 + . transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS intron 1380 1730 1 + . transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS CDS 601 739 1 + 0 transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS CDS 858 948 1 + 2 transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS CDS 1043 1170 1 + 1 transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS CDS 1300 1379 1 + 2 transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS CDS 1731 1952 0.68 + 0 transcript_id "g134.t1"; gene_id "g134"; scaffold_11_4818548-4822116 AUGUSTUS stop_codon 1950 1952 . + 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MPVNSREKNKDSNHEEMEVDYPEQEGSSSDEDDSESTSVSEDGDSSEMDDEDCERRRMECLDEMTNLEKQFTDLKDQL # YKERLSQVDAKLQEVMSGKASEYLDPLASLQENMQIRTKVAGIYRELCQESVKNKYECEIQAACQHWESEKLLLFDTVQSELEEKIRRLEEDRHSIDI # TSELWNDELQSRRSKKKDPFSPDKKKKPVAVSDILFSHRKALH] # end gene g134 ### # start gene g135 scaffold_11_4818548-4822116 AUGUSTUS gene 2046 2969 0.58 + . g135 scaffold_11_4818548-4822116 AUGUSTUS transcript 2046 2969 0.58 + . g135.t1 scaffold_11_4818548-4822116 AUGUSTUS start_codon 2046 2048 . + 0 transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS intron 2094 2261 0.95 + . transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS intron 2299 2497 0.89 + . transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS intron 2628 2851 0.99 + . transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS CDS 2046 2093 0.68 + 0 transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS CDS 2262 2298 0.89 + 0 transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS CDS 2498 2627 0.99 + 2 transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS CDS 2852 2969 1 + 1 transcript_id "g135.t1"; gene_id "g135"; scaffold_11_4818548-4822116 AUGUSTUS stop_codon 2967 2969 . + 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MLQDLDILEDWTAIRKAVATLGPHRGKEAPTNKNEKHQHSARSEEGRLFYDGEWYGRGQNICIDKKDEYPTSAIITTI # NHDEVWFKRLDGSKSKLYISQLQKGKYTIKHS] # end gene g135 ### # # ----- sequence number 132 (length = 3847, name = scaffold_11_6314960-6318806) ----- # # annotation: # Sequence scaffold_11_6314960-6318806 length=3847 scaffold_11_6314960-6318806 database start_codon 601 603 . + 0 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database intron 1187 1288 . + . transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database intron 1457 1724 . + . transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database intron 1809 1918 . + . transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database intron 2003 2124 . + . transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database intron 2207 2358 . + . transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database CDS 601 1186 . + 0 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database CDS 1289 1456 . + 2 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database CDS 1725 1808 . + 2 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database CDS 1919 2002 . + 2 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database CDS 2125 2206 . + 2 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database CDS 2359 3247 . + 1 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; scaffold_11_6314960-6318806 database stop_codon 3245 3247 . + 0 transcript_id "g_320-T1.1"; gene_id "g_320-T1"; # Predicted genes for sequence number 132 on both strands # start gene g136 scaffold_11_6314960-6318806 AUGUSTUS gene 304 3247 0.25 + . g136 scaffold_11_6314960-6318806 AUGUSTUS transcript 304 3247 0.25 + . g136.t1 scaffold_11_6314960-6318806 AUGUSTUS start_codon 304 306 . + 0 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS intron 1121 1288 0.86 + . transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS intron 1457 1724 0.92 + . transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS intron 1809 1918 0.5 + . transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS intron 2003 2124 0.5 + . transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS intron 2207 2358 1 + . transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS CDS 304 1120 0.53 + 0 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS CDS 1289 1456 1 + 2 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS CDS 1725 1808 0.92 + 2 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS CDS 1919 2002 0.55 + 2 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS CDS 2125 2206 0.93 + 2 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS CDS 2359 3247 1 + 1 transcript_id "g136.t1"; gene_id "g136"; scaffold_11_6314960-6318806 AUGUSTUS stop_codon 3245 3247 . + 0 transcript_id "g136.t1"; gene_id "g136"; # protein sequence = [MPMKKNMTSLMDLHSEAHKDTILGKLDKLRKKDLLCDVTLIVEHVSFKAHKALLAASSDYFCLMFTAEEHISRSTYKL # DGMEARTFEAVLEFIYSARVTMEPSSVEQLLVLARLLEVSNLVKTLTELNPAFPAHEEIGDEPKKVGQSTGKALLPKRKRGRPRKNAAVLSDVPLEVP # TEVSDHRIRKSLVTVETQVKADAVARSQPEEHPTETWSHDSHANCNPIIPARSRQSKRKIKPPVKFKGFRVGDNDAERREPGRRGRRRKYPNTEPRWE # KPFRCQVCGKGFTQKHSLLVHQRMHTGEKPYVCTVCSKALSTKHSLLEHMSLHTEQKSFNCDKCGKTFSQKRQLKSHYRVHTGKSLSECLLCHHKFMD # AAQLKKHLRTHTGEKPFTCEICGKCFTAKSTLQTHIHIHRGEKPYMCNVCNKSFSDPSARRRHVASHTGKKPFTCSSCNLTFARLDNLKTHTKTHNKE # RPPLEGQDTGAEAVGEAGQVRGEEEVPSLVQLQQYPLPAHPGEQEIQLVVTADVGNIGFVPGQEQGISIITATTEHQQAHPRLTLLTQPSGHLQNVAV # VTQGGGGEAPQIQTYSMLEGQMGSASHPEQMHVITLSKEAMEQLQAQHGPPQPLHITPHRLPQQQLHLIPPTQLDHNHPLLGHVAREHQEQSLHSQSS # HPIHISQTIEQIPSHQIQGHTFQIQAGNVSYLYTTSLAQHN] # end gene g136 ### # # ----- sequence number 133 (length = 3936, name = scaffold_11_7922242-7926177) ----- # # annotation: # Sequence scaffold_11_7922242-7926177 length=3936 scaffold_11_7922242-7926177 database start_codon 601 603 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database intron 628 1390 . + . transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database intron 1489 1603 . + . transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database intron 1668 1763 . + . transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database intron 1809 1907 . + . transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database intron 1971 2147 . + . transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database intron 2223 3096 . + . transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 601 627 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 1391 1488 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 1604 1667 . + 1 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 1764 1808 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 1908 1970 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 2148 2222 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database CDS 3097 3336 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; scaffold_11_7922242-7926177 database stop_codon 3334 3336 . + 0 transcript_id "g_332-T1.1"; gene_id "g_332-T1"; # Predicted genes for sequence number 133 on both strands # start gene g137 scaffold_11_7922242-7926177 AUGUSTUS gene 601 3336 0.36 + . g137 scaffold_11_7922242-7926177 AUGUSTUS transcript 601 3336 0.36 + . g137.t1 scaffold_11_7922242-7926177 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS intron 628 1411 0.45 + . transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS intron 1489 1603 0.86 + . transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS intron 1668 1763 0.95 + . transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS intron 1809 1907 0.95 + . transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS intron 1971 2147 1 + . transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS intron 2223 3096 0.97 + . transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 601 627 0.42 + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 1412 1488 0.58 + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 1604 1667 0.86 + 1 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 1764 1808 0.95 + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 1908 1970 1 + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 2148 2222 1 + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS CDS 3097 3336 0.97 + 0 transcript_id "g137.t1"; gene_id "g137"; scaffold_11_7922242-7926177 AUGUSTUS stop_codon 3334 3336 . + 0 transcript_id "g137.t1"; gene_id "g137"; # protein sequence = [MMFPQSRHSPLKFTTSDSCDRIKDEFQFLQAQYHSLKMECDKLASEKSEMQRHYIMYYEMSYGLNIEMHKQAEVVKRL # NGICAQVLPYLSQEHQQQVMGAIERAKQVTPPEMNSIIRQQLQVHQLSQLQGLALPMTPLPLGLTPPSLPAVTSSSGLLSLSSILASHSHAQAQLAKE # DKVREGAERDQREEDGDKSD] # end gene g137 ### # # ----- sequence number 134 (length = 4327, name = scaffold_11_8097253-8101579) ----- # # annotation: # Sequence scaffold_11_8097253-8101579 length=4327 scaffold_11_8097253-8101579 database start_codon 601 603 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 833 974 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 1067 1253 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 1425 1706 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 1902 2212 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 2333 2431 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 2507 2727 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 2821 2920 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database intron 3017 3115 . + . transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 601 832 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 975 1066 . + 2 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 1254 1424 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 1707 1901 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 2213 2332 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 2432 2506 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 2728 2820 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 2921 3016 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database CDS 3116 3727 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; scaffold_11_8097253-8101579 database stop_codon 3725 3727 . + 0 transcript_id "g_336-T1.1"; gene_id "g_336-T1"; # Predicted genes for sequence number 134 on both strands # start gene g138 scaffold_11_8097253-8101579 AUGUSTUS gene 601 3727 0.93 + . g138 scaffold_11_8097253-8101579 AUGUSTUS transcript 601 3727 0.93 + . g138.t1 scaffold_11_8097253-8101579 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 833 974 1 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 1067 1253 0.99 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 1425 1706 1 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 1902 2212 1 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 2333 2431 0.99 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 2507 2727 0.94 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 2821 2920 0.99 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS intron 3017 3115 1 + . transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 601 832 1 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 975 1066 0.99 + 2 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 1254 1424 1 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 1707 1901 1 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 2213 2332 1 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 2432 2506 0.99 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 2728 2820 0.95 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 2921 3016 1 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS CDS 3116 3727 1 + 0 transcript_id "g138.t1"; gene_id "g138"; scaffold_11_8097253-8101579 AUGUSTUS stop_codon 3725 3727 . + 0 transcript_id "g138.t1"; gene_id "g138"; # protein sequence = [METVQESSPVEVPAPGGPSEPQVDLTEDFRQQLEDIISTYQAAEDNGEPEDTDELSAGKDSGGPKDQKLEKKMLKSLG # KEAMLLMQSLNKLGTPEAKLEAIIKKHAELLEEHRSDQKQLKMLQKKLLQVMKEKDQLQSEHSRAVLARSKLEGLCRELQRHNKTLKEETLQRCREDD # LKRKDITTHFQSTLSDIQAQIEEHSSRNTRLCQENSDLAEKLKGLISQYDQREANLEKVFKHRDLQQKLLETKLAQANLILKEAEEKHKIEKELLLKQ # AAEWKLQVRHMRENENSMKAQLSMYSEKFDEFQGTVSKSNGVYASFKQDMDKMSKKMKKLEKESLSWKTRFDGCNKALVDMVTDKALKEKEFELFTVK # NQKLEKLCRALQEERKSLHQKLQEAQQGGTNGGQTMEAVTAEVSEATKEKANQSPSVATTANASEAASESASESASEALVVTTPVQTPLTRELASLKA # EQSRLQEIASTFTISHVLEQLSEDTESSDSVESHGHTEVSQGPEENHIEECHGCHANHTEETPASHDLTNQEETLGGEAQELRDKDMENVD] # end gene g138 ### # # ----- sequence number 135 (length = 6888, name = scaffold_11_8595741-8602628) ----- # # annotation: # Sequence scaffold_11_8595741-8602628 length=6888 scaffold_11_8595741-8602628 database start_codon 601 603 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 742 1121 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 1220 2165 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 2248 2531 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 2615 2748 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 2825 3226 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 3290 3397 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 3465 4084 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 4204 4352 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 4443 4611 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 4822 5395 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 5567 6050 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database intron 6119 6245 . + . transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 601 741 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 1122 1219 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 2166 2247 . + 1 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 2532 2614 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 2749 2824 . + 1 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 3227 3289 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 3398 3464 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 4085 4203 . + 2 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 4353 4442 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 4612 4821 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 5396 5566 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 6051 6118 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database CDS 6246 6288 . + 1 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; scaffold_11_8595741-8602628 database stop_codon 6286 6288 . + 0 transcript_id "g_347-T1.1"; gene_id "g_347-T1"; # Predicted genes for sequence number 135 on both strands # start gene g139 scaffold_11_8595741-8602628 AUGUSTUS gene 601 6288 0.51 + . g139 scaffold_11_8595741-8602628 AUGUSTUS transcript 601 6288 0.51 + . g139.t1 scaffold_11_8595741-8602628 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 742 1121 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 1220 2165 0.71 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 2248 2531 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 2619 3226 0.84 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 3290 3397 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 3465 4084 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 4204 4352 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 4443 4611 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 4822 5395 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 5567 6050 1 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS intron 6119 6245 0.98 + . transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 601 741 0.91 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 1122 1219 0.99 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 2166 2247 0.71 + 1 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 2532 2618 0.84 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 3227 3289 1 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 3398 3464 1 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 4085 4203 1 + 2 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 4353 4442 1 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 4612 4821 1 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 5396 5566 1 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 6051 6118 0.98 + 0 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS CDS 6246 6288 0.98 + 1 transcript_id "g139.t1"; gene_id "g139"; scaffold_11_8595741-8602628 AUGUSTUS stop_codon 6286 6288 . + 0 transcript_id "g139.t1"; gene_id "g139"; # protein sequence = [MFTYTVAWLGLSLALTASAFPTQQPENGKNWVVIVAGSNGWYNYRHQADACHAYQIVHKNGIPDEQIVVMMYDDLANN # EDNPTPGLVINRPNGTDVYKGVPKDYTGEAVTPGNFLAVLKGDSASVKGGSGKVLKRQLHVDDLMSAITYMRENKMYKKMVFYIEACESGSMMTNLPA # DIDVYATTAANSHESSYACYYDEKRDTYLGDWYSVNWMEDSDQEDLNKETLLKQFKIVKRHTNTSHVMQFGNKTLAHMKVMAFQGNSMADSNPAPSMT # LQPVADPDLTPSPDVPLAILKRKFMSTNDIHAAKGYAEQISQHLKVRELLAESMRRVVETVTGAEAQVQKILGERMELTQHQCYKAAVHHYKTRCFNW # HTTEYEYALRHLFALVNLCEAGYPADRIQKAMDHVCYFRK] # end gene g139 ### # # ----- sequence number 136 (length = 11340, name = scaffold_11_16743905-16755244) ----- # # annotation: # Sequence scaffold_11_16743905-16755244 length=11340 scaffold_11_16743905-16755244 database start_codon 601 603 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 752 887 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 1022 1149 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 1229 1447 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 1541 1690 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 1798 1945 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 2028 2200 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 2296 4863 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 5007 5116 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 5208 5304 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 5440 6666 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 6741 6834 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 6947 7330 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 7464 7733 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 7922 8982 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 9098 9198 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 9327 9637 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database intron 9785 10548 . + . transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 601 751 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 888 1021 . + 2 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 1150 1228 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 1448 1540 . + 2 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 1691 1797 . + 2 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 1946 2027 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 2201 2295 . + 2 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 4864 5006 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 5117 5207 . + 1 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 5305 5439 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 6667 6740 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 6835 6946 . + 1 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 7331 7463 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 7734 7921 . + 2 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 8983 9097 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 9199 9326 . + 2 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 9638 9784 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database CDS 10549 10740 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; scaffold_11_16743905-16755244 database stop_codon 10738 10740 . + 0 transcript_id "g_394-T1.1"; gene_id "g_394-T1"; # Predicted genes for sequence number 136 on both strands # start gene g140 scaffold_11_16743905-16755244 AUGUSTUS gene 1 5910 0.47 + . g140 scaffold_11_16743905-16755244 AUGUSTUS transcript 1 5910 0.47 + . g140.t1 scaffold_11_16743905-16755244 AUGUSTUS intron 134 585 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 752 887 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 1022 1149 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 1229 1447 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 1541 1690 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 1798 1945 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 2028 2200 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 2296 3859 0.68 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 3968 4863 0.67 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 5007 5116 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 5208 5304 1 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS intron 5440 5817 0.93 + . transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 1 133 1 + 1 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 586 751 1 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 888 1021 1 + 2 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 1150 1228 1 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 1448 1540 1 + 2 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 1691 1797 1 + 2 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 1946 2027 1 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 2201 2295 0.69 + 2 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 3860 3967 0.66 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 4864 5006 0.68 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 5117 5207 1 + 1 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 5305 5439 0.99 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS CDS 5818 5910 0.72 + 0 transcript_id "g140.t1"; gene_id "g140"; scaffold_11_16743905-16755244 AUGUSTUS stop_codon 5908 5910 . + 0 transcript_id "g140.t1"; gene_id "g140"; # protein sequence = [VKKKERASPSGEPGGPPLPHPPGPGGVDQDAAEVRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKERKQ # VIPPPPPLVEEDNDSEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLV # HRIHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGGGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSK # QVNMELAKIKQKCPLYEANGQALEMWRYPAADVARLWACSRLSALSPAGASCSCTKWRVPKEKDEMVEQEFNRLLEATSYLSHQLDFNFLNNKPVSLG # QALEVVIQLQEKHVKDEQIEHWKKIVKTQEDLKELLNKMVTTKERVKELHQQYKEANEVKPPRDITAEFLVKSKHRDLTALCKAVRPREAEDSTMVEF # VVDVLARAITAQTSV] # end gene g140 ### # start gene g141 scaffold_11_16743905-16755244 AUGUSTUS gene 6112 10740 0.59 + . g141 scaffold_11_16743905-16755244 AUGUSTUS transcript 6112 10740 0.59 + . g141.t1 scaffold_11_16743905-16755244 AUGUSTUS start_codon 6112 6114 . + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 6141 6334 0.66 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 6444 6666 0.97 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 6741 6834 0.95 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 6947 7330 1 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 7464 7733 1 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 7922 8982 1 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 9098 9198 1 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 9327 9637 1 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS intron 9785 10548 1 + . transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 6112 6140 0.72 + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 6335 6443 0.67 + 1 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 6667 6740 0.98 + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 6835 6946 0.95 + 1 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 7331 7463 1 + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 7734 7921 1 + 2 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 8983 9097 1 + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 9199 9326 1 + 2 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 9638 9784 1 + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS CDS 10549 10740 0.98 + 0 transcript_id "g141.t1"; gene_id "g141"; scaffold_11_16743905-16755244 AUGUSTUS stop_codon 10738 10740 . + 0 transcript_id "g141.t1"; gene_id "g141"; # protein sequence = [MERALASKKSDQKKRLRLCMGAVRVCLVCVCQIREAVAEGYGFPVREYDELVETQVKLEEKLQELEANPPSDVYLSSR # DRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTTQTFIYKCDAVL # CTLPLGVMKQQPPAVQFVPPLPEWKTAAIQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALMAGEAAGIMENISD # DVIVGRCLAILKGIFGSSAVPQPKETVVTRWRADPFARGSYSYVAAGSSGNDYDLMAQPITPGPTIPGASQPVPRLFFAGEHTIRNYPATVHGALLSG # LREAGRIADQFLGAMYTLPRQATPAANPQAQPSPSV] # end gene g141 ### # # ----- sequence number 137 (length = 3972, name = scaffold_11_17009695-17013666) ----- # # annotation: # Sequence scaffold_11_17009695-17013666 length=3972 scaffold_11_17009695-17013666 database start_codon 601 603 . + 0 transcript_id "g_395-T1.1"; gene_id "g_395-T1"; scaffold_11_17009695-17013666 database intron 716 2929 . + . transcript_id "g_395-T1.1"; gene_id "g_395-T1"; scaffold_11_17009695-17013666 database CDS 601 715 . + 0 transcript_id "g_395-T1.1"; gene_id "g_395-T1"; scaffold_11_17009695-17013666 database CDS 2930 3372 . + 2 transcript_id "g_395-T1.1"; gene_id "g_395-T1"; scaffold_11_17009695-17013666 database stop_codon 3370 3372 . + 0 transcript_id "g_395-T1.1"; gene_id "g_395-T1"; # Predicted genes for sequence number 137 on both strands # start gene g142 scaffold_11_17009695-17013666 AUGUSTUS gene 1 3499 0.29 + . g142 scaffold_11_17009695-17013666 AUGUSTUS transcript 1 3499 0.29 + . g142.t1 scaffold_11_17009695-17013666 AUGUSTUS intron 1 316 0.76 + . transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS intron 366 627 0.78 + . transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS intron 716 2953 0.63 + . transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS intron 3230 3368 0.66 + . transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS CDS 317 365 0.77 + 1 transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS CDS 628 715 1 + 0 transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS CDS 2954 3229 0.45 + 2 transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS CDS 3369 3499 0.96 + 2 transcript_id "g142.t1"; gene_id "g142"; scaffold_11_17009695-17013666 AUGUSTUS stop_codon 3497 3499 . + 0 transcript_id "g142.t1"; gene_id "g142"; # protein sequence = [AEVPHQRFSSSEAACRAEGEDNLKKMQLMELAILNGTYRDTNIKTPAAAAAQGPRLIAAPPGQVLPPGSMRPPTPGGT # PIMNIIRPAQMAAMLPNGTPTLVPPTPDGGIIYTTPYDYPYTLAPTSLLEYPLEHSGVLAEDNRVVVMLVEGGWPAGRPAGMDELILGMGGQGEPLLG # HLSG] # end gene g142 ### # # ----- sequence number 138 (length = 6754, name = scaffold_12_2931088-2937841) ----- # # annotation: # Sequence scaffold_12_2931088-2937841 length=6754 scaffold_12_2931088-2937841 database start_codon 601 603 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 627 1128 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 1340 1566 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 1720 2273 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 2385 2671 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 2801 3060 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 3181 3422 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 3540 4078 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 4207 4663 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 4791 5008 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 5177 5557 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database intron 5711 6055 . + . transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 601 626 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 1129 1339 . + 1 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 1567 1719 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 2274 2384 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 2672 2800 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 3061 3180 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 3423 3539 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 4079 4206 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 4664 4790 . + 1 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 5009 5176 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 5558 5710 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database CDS 6056 6154 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; scaffold_12_2931088-2937841 database stop_codon 6152 6154 . + 0 transcript_id "g_417-T1.1"; gene_id "g_417-T1"; # Predicted genes for sequence number 138 on both strands # start gene g143 scaffold_12_2931088-2937841 AUGUSTUS gene 1145 6154 0.77 + . g143 scaffold_12_2931088-2937841 AUGUSTUS transcript 1145 6154 0.77 + . g143.t1 scaffold_12_2931088-2937841 AUGUSTUS start_codon 1145 1147 . + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 1340 1566 1 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 1720 2273 0.97 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 2385 2671 1 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 2801 3060 0.99 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 3181 3422 1 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 3540 4078 0.97 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 4207 4663 1 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 4791 5008 0.99 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 5177 5557 1 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS intron 5711 6055 1 + . transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 1145 1339 0.82 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 1567 1719 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 2274 2384 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 2672 2800 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 3061 3180 0.99 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 3423 3539 0.98 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 4079 4206 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 4664 4790 0.99 + 1 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 5009 5176 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 5558 5710 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS CDS 6056 6154 1 + 0 transcript_id "g143.t1"; gene_id "g143"; scaffold_12_2931088-2937841 AUGUSTUS stop_codon 6152 6154 . + 0 transcript_id "g143.t1"; gene_id "g143"; # protein sequence = [MQYLKENNLQRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGA # ARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRVAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPPGMTIDLFRGK # AAVKDVEEERFPTQLTRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKI # KVWKIQSGQCLRRFERAHSKGVTCLSFCKDSSQLLSASFDQTIRVHGLKSGKSLKEFRGHSSFVNEATFTPDGHHIVSASSDGTVKVWNMKTTECTST # FKSLGTSAGSDITVNNVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTIHE # KDVIGIAHHPHQNLIATYSEDGLLKLWKP] # end gene g143 ### # # ----- sequence number 139 (length = 3480, name = scaffold_12_2980239-2983718) ----- # # annotation: # Sequence scaffold_12_2980239-2983718 length=3480 scaffold_12_2980239-2983718 database start_codon 601 603 . + 0 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database intron 616 952 . + . transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database intron 1085 1787 . + . transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database intron 1905 2266 . + . transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database intron 2385 2641 . + . transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database CDS 601 615 . + 0 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database CDS 953 1084 . + 0 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database CDS 1788 1904 . + 0 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database CDS 2267 2384 . + 0 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database CDS 2642 2880 . + 2 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; scaffold_12_2980239-2983718 database stop_codon 2878 2880 . + 0 transcript_id "g_418-T1.1"; gene_id "g_418-T1"; # Predicted genes for sequence number 139 on both strands # start gene g144 scaffold_12_2980239-2983718 AUGUSTUS gene 1 2880 0.97 + . g144 scaffold_12_2980239-2983718 AUGUSTUS transcript 1 2880 0.97 + . g144.t1 scaffold_12_2980239-2983718 AUGUSTUS intron 1 48 1 + . transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS intron 110 397 1 + . transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS intron 616 952 0.98 + . transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS intron 1085 1787 1 + . transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS intron 1905 2266 0.99 + . transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS intron 2385 2641 1 + . transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS CDS 49 109 1 + 0 transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS CDS 398 615 1 + 2 transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS CDS 953 1084 0.98 + 0 transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS CDS 1788 1904 1 + 0 transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS CDS 2267 2384 0.99 + 0 transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS CDS 2642 2880 1 + 2 transcript_id "g144.t1"; gene_id "g144"; scaffold_12_2980239-2983718 AUGUSTUS stop_codon 2878 2880 . + 0 transcript_id "g144.t1"; gene_id "g144"; # protein sequence = [ELSPQEVKRLTQFSKQGYLVGRIGRTFRAEAGKNKGVVEFDPDSLAYGEGGGEEEEEEKEGKRELSAQPELTLNELKD # AHWLHDTPGIMKDHDILNLLTEQEVKMVVPTQAIVPRTFLLKPGMVLFLGAVGRIDYLQGAESCWLSVIASAKLPVHITSLDRADSIYQKHAGQILLG # VPMGGEERMKDFPRLVCQEFELKGLGHYKAIADIKMSSAGWVAVTGVEGSQVVLRAHTPEGSGLSLRSPPLLPHVVTIRGERINKSPAYKLRKPPALV # DSCISYKGADRLNVKKRKSS] # end gene g144 ### # # ----- sequence number 140 (length = 3198, name = scaffold_12_3816562-3819759) ----- # # annotation: # Sequence scaffold_12_3816562-3819759 length=3198 scaffold_12_3816562-3819759 database start_codon 601 603 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database intron 604 1138 . + . transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database intron 1295 1495 . + . transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database intron 1625 1867 . + . transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database intron 2006 2508 . + . transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database CDS 601 603 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database CDS 1139 1294 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database CDS 1496 1624 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database CDS 1868 2005 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database CDS 2509 2598 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; scaffold_12_3816562-3819759 database stop_codon 2596 2598 . + 0 transcript_id "g_422-T1.1"; gene_id "g_422-T1"; # Predicted genes for sequence number 140 on both strands # start gene g145 scaffold_12_3816562-3819759 AUGUSTUS gene 601 2598 0.8 + . g145 scaffold_12_3816562-3819759 AUGUSTUS transcript 601 2598 0.8 + . g145.t1 scaffold_12_3816562-3819759 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS intron 604 1138 0.83 + . transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS intron 1295 1495 1 + . transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS intron 1625 1867 1 + . transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS intron 2006 2508 0.96 + . transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS CDS 601 603 0.83 + 0 transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS CDS 1139 1294 1 + 0 transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS CDS 1496 1624 1 + 0 transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS CDS 1868 2005 0.96 + 0 transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS CDS 2509 2598 0.96 + 0 transcript_id "g145.t1"; gene_id "g145"; scaffold_12_3816562-3819759 AUGUSTUS stop_codon 2596 2598 . + 0 transcript_id "g145.t1"; gene_id "g145"; # protein sequence = [MASGYRKPTATAHSKKKPGPKPDLTEEQKQEIREAFDLFDTDGSGTIDVKELKVAMRALGFEPKKEEIKKMIADIDKE # GSGTIDFNDFLSMMTQKMSEKDSKEEILKAFRLFDDDGTGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY] # end gene g145 ### # # ----- sequence number 141 (length = 1982, name = scaffold_12_4372565-4374546) ----- # # annotation: # Sequence scaffold_12_4372565-4374546 length=1982 scaffold_12_4372565-4374546 database start_codon 601 603 . + 0 transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database intron 668 810 . + . transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database intron 981 1065 . + . transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database intron 1156 1319 . + . transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database CDS 601 667 . + 0 transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database CDS 811 980 . + 2 transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database CDS 1066 1155 . + 0 transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database CDS 1320 1382 . + 0 transcript_id "g_427-T1.1"; gene_id "g_427-T1"; scaffold_12_4372565-4374546 database stop_codon 1380 1382 . + 0 transcript_id "g_427-T1.1"; gene_id "g_427-T1"; # Predicted genes for sequence number 141 on both strands # start gene g146 scaffold_12_4372565-4374546 AUGUSTUS gene 601 1382 0.73 + . g146 scaffold_12_4372565-4374546 AUGUSTUS transcript 601 1382 0.73 + . g146.t1 scaffold_12_4372565-4374546 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS intron 668 810 1 + . transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS intron 981 1065 1 + . transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS intron 1156 1319 1 + . transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS CDS 601 667 0.73 + 0 transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS CDS 811 980 1 + 2 transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS CDS 1066 1155 1 + 0 transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS CDS 1320 1382 1 + 0 transcript_id "g146.t1"; gene_id "g146"; scaffold_12_4372565-4374546 AUGUSTUS stop_codon 1380 1382 . + 0 transcript_id "g146.t1"; gene_id "g146"; # protein sequence = [MSFTGKYQVVEKENLEDYMNLMGLAENHVKTITENTWETEITQNDEFTITKRFKDRNWSNTFTVGELCELTSISGVKF # MTTPTMEGGKLTIQYPMNLYTAEVNGDELIETSTMFTKKGSIISYIYSKRI] # end gene g146 ### # # ----- sequence number 142 (length = 4390, name = scaffold_12_4982361-4986750) ----- # # annotation: # Sequence scaffold_12_4982361-4986750 length=4390 scaffold_12_4982361-4986750 database start_codon 601 603 . + 0 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database intron 683 1514 . + . transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database intron 1676 1828 . + . transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database intron 2001 2217 . + . transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database intron 2402 3606 . + . transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database CDS 601 682 . + 0 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database CDS 1515 1675 . + 2 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database CDS 1829 2000 . + 0 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database CDS 2218 2401 . + 2 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database CDS 3607 3790 . + 1 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; scaffold_12_4982361-4986750 database stop_codon 3788 3790 . + 0 transcript_id "g_429-T1.1"; gene_id "g_429-T1"; # Predicted genes for sequence number 142 on both strands # start gene g147 scaffold_12_4982361-4986750 AUGUSTUS gene 601 3790 0.46 + . g147 scaffold_12_4982361-4986750 AUGUSTUS transcript 601 3790 0.46 + . g147.t1 scaffold_12_4982361-4986750 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS intron 683 1514 0.96 + . transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS intron 1676 1828 1 + . transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS intron 2001 2217 1 + . transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS intron 2402 3606 1 + . transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS CDS 601 682 0.49 + 0 transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS CDS 1515 1675 0.97 + 2 transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS CDS 1829 2000 1 + 0 transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS CDS 2218 2401 1 + 2 transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS CDS 3607 3790 1 + 1 transcript_id "g147.t1"; gene_id "g147"; scaffold_12_4982361-4986750 AUGUSTUS stop_codon 3788 3790 . + 0 transcript_id "g147.t1"; gene_id "g147"; # protein sequence = [MNMLSGSDDLTKQRMKQAQTLSREIRGDRLNLGKKISVPKDLMMEELNLPSNRGSRMFQERQKRVEKFTLENTLNDAY # CSNGFEDPQRPQVSPQPPQVYPLPEPGKENQSYPIHGKHSLVTTLQKTVAMKGSPAFLAPGYSGPLKEIPREKFNMTVIPKSYCSPWREALDGPQERL # EALSAQLPQPPQTLQPANYRCFNRAAVPFGGPMASRRVIPVIGFEALENQNHPSTTLDHLLKRPNFNRAPRGWGAQYSPESNDL] # end gene g147 ### # # ----- sequence number 143 (length = 2683, name = scaffold_12_6362993-6365675) ----- # # annotation: # Sequence scaffold_12_6362993-6365675 length=2683 scaffold_12_6362993-6365675 database start_codon 601 603 . + 0 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database intron 605 792 . + . transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database intron 877 1057 . + . transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database intron 1255 1584 . + . transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database intron 1724 1949 . + . transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database CDS 601 604 . + 0 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database CDS 793 876 . + 2 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database CDS 1058 1254 . + 2 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database CDS 1585 1723 . + 0 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database CDS 1950 2083 . + 2 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; scaffold_12_6362993-6365675 database stop_codon 2081 2083 . + 0 transcript_id "g_434-T1.1"; gene_id "g_434-T1"; # Predicted genes for sequence number 143 on both strands # start gene g148 scaffold_12_6362993-6365675 AUGUSTUS gene 813 2083 0.77 + . g148 scaffold_12_6362993-6365675 AUGUSTUS transcript 813 2083 0.77 + . g148.t1 scaffold_12_6362993-6365675 AUGUSTUS start_codon 813 815 . + 0 transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS intron 877 1057 1 + . transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS intron 1255 1584 1 + . transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS intron 1724 1949 1 + . transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS CDS 813 876 0.77 + 0 transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS CDS 1058 1254 1 + 2 transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS CDS 1585 1723 1 + 0 transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS CDS 1950 2083 1 + 2 transcript_id "g148.t1"; gene_id "g148"; scaffold_12_6362993-6365675 AUGUSTUS stop_codon 2081 2083 . + 0 transcript_id "g148.t1"; gene_id "g148"; # protein sequence = [MKVETSGASEKTAKQDKLTVKGVEASHKMAETDFKRASQYKSMVQKVGHSKGLAPAIIAGIMSRESRAGAALDHGWGD # HGNGFGLMQVDKRFHKPLGAWDSEEHVTQATEILVGFITKIQKKFPKWPKEHQLKGGISAYNAGDKNVQTYERMDVGTTGDDYSNDVVARSQWFKTHG # F] # end gene g148 ### # # ----- sequence number 144 (length = 2019, name = scaffold_12_6429164-6431182) ----- # # annotation: # Sequence scaffold_12_6429164-6431182 length=2019 scaffold_12_6429164-6431182 database start_codon 601 603 . + 0 transcript_id "g_437-T1.1"; gene_id "g_437-T1"; scaffold_12_6429164-6431182 database intron 748 1007 . + . transcript_id "g_437-T1.1"; gene_id "g_437-T1"; scaffold_12_6429164-6431182 database intron 1185 1362 . + . transcript_id "g_437-T1.1"; gene_id "g_437-T1"; scaffold_12_6429164-6431182 database CDS 601 747 . + 0 transcript_id "g_437-T1.1"; gene_id "g_437-T1"; scaffold_12_6429164-6431182 database CDS 1008 1184 . + 0 transcript_id "g_437-T1.1"; gene_id "g_437-T1"; scaffold_12_6429164-6431182 database CDS 1363 1419 . + 0 transcript_id "g_437-T1.1"; gene_id "g_437-T1"; scaffold_12_6429164-6431182 database stop_codon 1417 1419 . + 0 transcript_id "g_437-T1.1"; gene_id "g_437-T1"; # Predicted genes for sequence number 144 on both strands # start gene g149 scaffold_12_6429164-6431182 AUGUSTUS gene 601 1419 0.95 + . g149 scaffold_12_6429164-6431182 AUGUSTUS transcript 601 1419 0.95 + . g149.t1 scaffold_12_6429164-6431182 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g149.t1"; gene_id "g149"; scaffold_12_6429164-6431182 AUGUSTUS intron 748 1007 1 + . transcript_id "g149.t1"; gene_id "g149"; scaffold_12_6429164-6431182 AUGUSTUS intron 1185 1362 1 + . transcript_id "g149.t1"; gene_id "g149"; scaffold_12_6429164-6431182 AUGUSTUS CDS 601 747 0.95 + 0 transcript_id "g149.t1"; gene_id "g149"; scaffold_12_6429164-6431182 AUGUSTUS CDS 1008 1184 1 + 0 transcript_id "g149.t1"; gene_id "g149"; scaffold_12_6429164-6431182 AUGUSTUS CDS 1363 1419 1 + 0 transcript_id "g149.t1"; gene_id "g149"; scaffold_12_6429164-6431182 AUGUSTUS stop_codon 1417 1419 . + 0 transcript_id "g149.t1"; gene_id "g149"; # protein sequence = [MKDPSRINNTSNINNNNSNEVILTNQFNNEDNPFAEYMWMENEEEFNRQVEEELWEEEFIERCFQEMLEEEEHEWFIP # ARDLPQAISQLQDQLNLLGLGDECLLDDLVINSSLNPNAEEFVPGIKQ] # end gene g149 ### # # ----- sequence number 145 (length = 5627, name = scaffold_12_6512496-6518122) ----- # # annotation: # Sequence scaffold_12_6512496-6518122 length=5627 scaffold_12_6512496-6518122 database start_codon 601 603 . + 0 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database intron 1004 1805 . + . transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database intron 2085 3636 . + . transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database intron 3751 4030 . + . transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database intron 4253 4437 . + . transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database intron 4695 4883 . + . transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database CDS 601 1003 . + 0 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database CDS 1806 2084 . + 2 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database CDS 3637 3750 . + 2 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database CDS 4031 4252 . + 2 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database CDS 4438 4694 . + 2 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database CDS 4884 5027 . + 0 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; scaffold_12_6512496-6518122 database stop_codon 5025 5027 . + 0 transcript_id "g_438-T1.1"; gene_id "g_438-T1"; # Predicted genes for sequence number 145 on both strands # start gene g150 scaffold_12_6512496-6518122 AUGUSTUS gene 1 393 0.56 - . g150 scaffold_12_6512496-6518122 AUGUSTUS transcript 1 393 0.56 - . g150.t1 scaffold_12_6512496-6518122 AUGUSTUS intron 1 302 0.56 - . transcript_id "g150.t1"; gene_id "g150"; scaffold_12_6512496-6518122 AUGUSTUS CDS 303 393 0.69 - 0 transcript_id "g150.t1"; gene_id "g150"; scaffold_12_6512496-6518122 AUGUSTUS start_codon 391 393 . - 0 transcript_id "g150.t1"; gene_id "g150"; # protein sequence = [MTGSLRQDAAAERSGRALSEVDVAGSEPQG] # end gene g150 ### # start gene g151 scaffold_12_6512496-6518122 AUGUSTUS gene 601 5027 0.47 + . g151 scaffold_12_6512496-6518122 AUGUSTUS transcript 601 5027 0.47 + . g151.t1 scaffold_12_6512496-6518122 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS intron 1004 1805 1 + . transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS intron 2085 3636 0.64 + . transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS intron 3751 4030 1 + . transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS intron 4253 4437 1 + . transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS intron 4695 4883 1 + . transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS CDS 601 1003 0.76 + 0 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS CDS 1806 2084 0.91 + 2 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS CDS 3637 3750 1 + 2 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS CDS 4031 4252 1 + 2 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS CDS 4438 4694 1 + 2 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS CDS 4884 5027 1 + 0 transcript_id "g151.t1"; gene_id "g151"; scaffold_12_6512496-6518122 AUGUSTUS stop_codon 5025 5027 . + 0 transcript_id "g151.t1"; gene_id "g151"; # protein sequence = [MTSMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSSPGQPSKCVTIPRSLDGRLQV # SHRKGLPHVIYCRVWRWPDLQSHHELKPLEVCEYPFGSKQKEVCINPYHYTRVESPVLPPVLVPRHSEFNPQHSLLVQFRNLTHNEPHMPLNATFPES # FQQHSGGNGGGSGGSSFPISPNSPYPPSPASSGTYPNSPASSGPSSPFQLPADTPPPAYRPPDEQMGQDSSQSMETGSSMVVPQNMPRGDVQPVEYEE # PSHWCSIVYYELNNRVGEAYHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTSIFVQSRNCNYHHG # FHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPLNPISS # VS] # end gene g151 ### # # ----- sequence number 146 (length = 9083, name = scaffold_12_6595620-6604702) ----- # # annotation: # Sequence scaffold_12_6595620-6604702 length=9083 scaffold_12_6595620-6604702 database start_codon 601 603 . + 0 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 656 914 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 1112 3233 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 3447 3916 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 4104 4764 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 4990 6261 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 6425 7353 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 7567 8107 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database intron 8280 8423 . + . transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 601 655 . + 0 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 915 1111 . + 2 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 3234 3446 . + 0 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 3917 4103 . + 0 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 4765 4989 . + 2 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 6262 6424 . + 2 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 7354 7566 . + 1 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 8108 8279 . + 1 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database CDS 8424 8483 . + 0 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; scaffold_12_6595620-6604702 database stop_codon 8481 8483 . + 0 transcript_id "g_440-T1.1"; gene_id "g_440-T1"; # Predicted genes for sequence number 146 on both strands # start gene g152 scaffold_12_6595620-6604702 AUGUSTUS gene 1 8483 0.82 + . g152 scaffold_12_6595620-6604702 AUGUSTUS transcript 1 8483 0.82 + . g152.t1 scaffold_12_6595620-6604702 AUGUSTUS intron 1 518 0.99 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 656 914 0.99 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 1112 3233 0.99 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 3447 3916 0.99 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 4104 4764 0.99 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 4990 6261 1 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 6425 7353 0.87 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 7567 8107 0.93 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS intron 8280 8423 1 + . transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 519 655 0.99 + 1 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 915 1111 0.99 + 2 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 3234 3446 1 + 0 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 3917 4103 0.99 + 0 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 4765 4989 0.99 + 2 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 6262 6424 0.96 + 2 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 7354 7566 0.87 + 1 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 8108 8279 1 + 1 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS CDS 8424 8483 0.99 + 0 transcript_id "g152.t1"; gene_id "g152"; scaffold_12_6595620-6604702 AUGUSTUS stop_codon 8481 8483 . + 0 transcript_id "g152.t1"; gene_id "g152"; # protein sequence = [LVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPDALRSLVNFAYTGVLELKEETIESLLAAACLLQLSQVIEVCCNFL # MKQLHPSNCLGIRSFADAQGCVDLLNVAHTYTMEHFLEVIQNQEFLLLPTTEIVKLLSSDDINVPDEETIFQALMMWVRYDVQQRQQDLGLLLANIRL # PLLPPQLLADLENNKMFSDDLECQKLLMEAMKYHLLPERRPMFQSPRTKPRKSTVGALYAVGGMDATKGSTTIEKYDLRTNTWIQVGIMNGRRLQFGV # AVIDNKLYVVGGRDGLKTSNMVECYNPINKVWSTMPPMSTHRHGLGIAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVTALN # GKLFAVGGRDGSSCLRSMECFDPHTNKWSMCTPMAKRRGGVGVATYNSFLYAVGGHDAPASNHCSRLSDCVERYDPKTDTWTTVSSLSVPRDAVGVCL # LGDRLYAVGGYDGQSYLHNVESYDALNNEWTEEVPLNIGRAGACVVVVKLP] # end gene g152 ### # # ----- sequence number 147 (length = 8683, name = scaffold_12_7517930-7526612) ----- # # annotation: # Sequence scaffold_12_7517930-7526612 length=8683 scaffold_12_7517930-7526612 database start_codon 601 603 . + 0 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 691 1253 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 1366 2619 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 2766 2967 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 3108 4099 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 4178 4762 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 4858 5470 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 5597 5714 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 5793 5872 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 5958 6069 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database intron 6168 7904 . + . transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 601 690 . + 0 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 1254 1365 . + 0 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 2620 2765 . + 2 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 2968 3107 . + 0 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 4100 4177 . + 1 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 4763 4857 . + 1 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 5471 5596 . + 2 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 5715 5792 . + 2 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 5873 5957 . + 2 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 6070 6167 . + 1 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database CDS 7905 8083 . + 2 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; scaffold_12_7517930-7526612 database stop_codon 8081 8083 . + 0 transcript_id "g_449-T1.1"; gene_id "g_449-T1"; # Predicted genes for sequence number 147 on both strands # start gene g153 scaffold_12_7517930-7526612 AUGUSTUS gene 1 8083 0.4 + . g153 scaffold_12_7517930-7526612 AUGUSTUS transcript 1 8083 0.4 + . g153.t1 scaffold_12_7517930-7526612 AUGUSTUS intron 1 565 0.92 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 691 810 0.53 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 828 1787 0.53 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 1814 2619 0.53 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 2766 2967 1 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 3108 4099 1 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 4178 4762 0.97 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 4858 5470 1 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 5597 5714 0.98 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 5793 5872 0.98 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 5958 6069 0.97 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 6168 6661 1 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS intron 6710 7904 1 + . transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 566 690 0.98 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 811 827 0.53 + 0 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 1788 1813 0.53 + 1 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 2620 2765 1 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 2968 3107 1 + 0 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 4100 4177 0.97 + 1 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 4763 4857 1 + 1 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 5471 5596 1 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 5715 5792 0.98 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 5873 5957 0.98 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 6070 6167 0.97 + 1 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 6662 6709 1 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS CDS 7905 8083 1 + 2 transcript_id "g153.t1"; gene_id "g153"; scaffold_12_7517930-7526612 AUGUSTUS stop_codon 8081 8083 . + 0 transcript_id "g153.t1"; gene_id "g153"; # protein sequence = [CGDIHGQFFDLMKLFEVGGSPATTRYLFLGDYVDRGYFSIEYTVKKRMTVACHKAGKIKYSEQVYDSCMDAFDCLPLA # ALMNQQFLCVHGGLSPEIHTLDDIKKLDRFKEPPAFGPMCDLLWADPLEDFGNEKTQEYFGHNTVRGCSYFYSYPAVCEFLQTNNLLSVIRAHEAQDA # GYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELMNDGDEI # YDANAAAARKEVIKNKIRAIGKMAKMFSVLREESENVLTLKGLTPTGMLPSGVLSGGKQTLQSATIEAIEAIETVEDAEAIRGFSPQHRISSFEEAKG # LDRINERMPPRRDVVNSVGLSMGRMNMGEPNGTDNNSNIQ] # end gene g153 ### # # ----- sequence number 148 (length = 6965, name = scaffold_12_7644842-7651806) ----- # # annotation: # Sequence scaffold_12_7644842-7651806 length=6965 scaffold_12_7644842-7651806 database start_codon 601 603 . + 0 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database intron 677 3597 . + . transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database intron 3699 3850 . + . transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database intron 3957 5166 . + . transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database intron 5194 6357 . + . transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database CDS 601 676 . + 0 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database CDS 3598 3698 . + 2 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database CDS 3851 3956 . + 0 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database CDS 5167 5193 . + 2 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database CDS 6358 6365 . + 2 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; scaffold_12_7644842-7651806 database stop_codon 6363 6365 . + 0 transcript_id "g_452-T1.1"; gene_id "g_452-T1"; # Predicted genes for sequence number 148 on both strands # start gene g154 scaffold_12_7644842-7651806 AUGUSTUS gene 3615 5981 0.89 + . g154 scaffold_12_7644842-7651806 AUGUSTUS transcript 3615 5981 0.89 + . g154.t1 scaffold_12_7644842-7651806 AUGUSTUS start_codon 3615 3617 . + 0 transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS intron 3699 3850 1 + . transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS intron 3957 5166 0.92 + . transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS intron 5194 5895 0.9 + . transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS CDS 3615 3698 1 + 0 transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS CDS 3851 3956 0.99 + 0 transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS CDS 5167 5193 0.93 + 2 transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS CDS 5896 5981 0.9 + 2 transcript_id "g154.t1"; gene_id "g154"; scaffold_12_7644842-7651806 AUGUSTUS stop_codon 5979 5981 . + 0 transcript_id "g154.t1"; gene_id "g154"; # protein sequence = [MSSVPGGTGENIVYALLCGGAFAGSVAYAYSTVTTDHERFNERVAEIKARPKTEWTPKPWPPKSRDGDEEEEASDPFP # LSPDSILLAKGPVNQNSGATLP] # end gene g154 ### # # ----- sequence number 149 (length = 3319, name = scaffold_12_9003400-9006718) ----- # # annotation: # Sequence scaffold_12_9003400-9006718 length=3319 scaffold_12_9003400-9006718 database start_codon 601 603 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database intron 747 892 . + . transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database intron 951 1111 . + . transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database intron 1250 1691 . + . transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database intron 1783 2170 . + . transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database intron 2239 2331 . + . transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database intron 2425 2650 . + . transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 601 746 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 893 950 . + 1 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 1112 1249 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 1692 1782 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 2171 2238 . + 2 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 2332 2424 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database CDS 2651 2719 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; scaffold_12_9003400-9006718 database stop_codon 2717 2719 . + 0 transcript_id "g_503-T1.1"; gene_id "g_503-T1"; # Predicted genes for sequence number 149 on both strands # start gene g155 scaffold_12_9003400-9006718 AUGUSTUS gene 601 3035 0.67 + . g155 scaffold_12_9003400-9006718 AUGUSTUS transcript 601 3035 0.67 + . g155.t1 scaffold_12_9003400-9006718 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 747 892 1 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 951 1111 1 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 1250 1691 0.98 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 1783 2170 0.93 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 2239 2331 0.97 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 2425 2650 0.85 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS intron 2706 2862 0.82 + . transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 601 746 0.89 + 0 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 893 950 1 + 1 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 1112 1249 1 + 0 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 1692 1782 0.98 + 0 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 2171 2238 0.93 + 2 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 2332 2424 0.95 + 0 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 2651 2705 0.82 + 0 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS CDS 2863 3035 0.89 + 2 transcript_id "g155.t1"; gene_id "g155"; scaffold_12_9003400-9006718 AUGUSTUS stop_codon 3033 3035 . + 0 transcript_id "g155.t1"; gene_id "g155"; # protein sequence = [MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGSYLFHYICHDRIIYLCITDDDFERSRAFSF # LSEVKKRFQTTYGSRAQTALPYAMNSEFSSTLAAQMKHHSDSRGSDRLTDTQMQVDDLKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSR # NLARAMCMKNLKLTIIVVLVCLVLLYIIVSAACGGLSWPSSSTPQERSSLSSSSCLPPSSLPPASSHPVCLLLLTKKASGYAMTLHLRRAPPPLSIP] # end gene g155 ### # # ----- sequence number 150 (length = 5308, name = scaffold_12_9035021-9040328) ----- # # annotation: # Sequence scaffold_12_9035021-9040328 length=5308 scaffold_12_9035021-9040328 database start_codon 601 603 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 644 1779 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 1995 2712 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 2819 2941 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 3016 3093 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 3190 3941 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 4059 4193 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database intron 4292 4485 . + . transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 601 643 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 1780 1994 . + 2 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 2713 2818 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 2942 3015 . + 2 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 3094 3189 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 3942 4058 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 4194 4291 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database CDS 4486 4708 . + 1 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; scaffold_12_9035021-9040328 database stop_codon 4706 4708 . + 0 transcript_id "g_457-T1.1"; gene_id "g_457-T1"; # Predicted genes for sequence number 150 on both strands # start gene g156 scaffold_12_9035021-9040328 AUGUSTUS gene 821 4708 0.46 + . g156 scaffold_12_9035021-9040328 AUGUSTUS transcript 821 4708 0.46 + . g156.t1 scaffold_12_9035021-9040328 AUGUSTUS start_codon 821 823 . + 0 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS intron 987 1779 1 + . transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS intron 1995 2712 1 + . transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS intron 2819 2941 1 + . transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS intron 3190 3941 1 + . transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS intron 4059 4193 1 + . transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS intron 4292 4485 1 + . transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 821 986 0.61 + 0 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 1780 1994 1 + 2 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 2713 2818 1 + 0 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 2942 3189 0.76 + 2 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 3942 4058 1 + 0 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 4194 4291 1 + 0 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS CDS 4486 4708 1 + 1 transcript_id "g156.t1"; gene_id "g156"; scaffold_12_9035021-9040328 AUGUSTUS stop_codon 4706 4708 . + 0 transcript_id "g156.t1"; gene_id "g156"; # protein sequence = [METTCHPGRQYEYRITHSCPLRVNTSVTSCQERCCWAGEVFVFSIDLELVRCQALVSSSHTCDRLKQEKEQALSTMEE # VLLKVQEQHCRELAQLEERLQTFYQAEWDKVHLTYQQEADKCKALMEQQMGELRAAHDDLRLVLENRHTEQLQTVQKQYEDSLEEMRKTHEQELQTLE # RTLKDAEATLSVSVHSHRLSLEPLLAGGPSALLLCPQGQIQELTAENSTLSQRLKAEEDRRRELADKNQKDSHTLYLEQELESLKVVLDIKIKQLHQQ # DKKLMQMDKLMEKSVKLDECLQKVQQENEDLRARMDRHTALSRQLSTEQAVLQESLQKESKVNKRLSMENEELLWKLHNGDLSSPRKMSPTSPAHALS # LQSPRNSAIFSSPPVSPR] # end gene g156 ### # # ----- sequence number 151 (length = 4974, name = scaffold_12_10174547-10179520) ----- # # annotation: # Sequence scaffold_12_10174547-10179520 length=4974 scaffold_12_10174547-10179520 database start_codon 601 603 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 628 2272 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 2380 2673 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 2858 3231 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 3298 3589 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 3608 3720 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 3804 3945 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 3993 4159 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database intron 4237 4326 . + . transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 601 627 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 2273 2379 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 2674 2857 . + 1 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 3232 3297 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 3590 3607 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 3721 3803 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 3946 3992 . + 1 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 4160 4236 . + 2 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database CDS 4327 4374 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; scaffold_12_10174547-10179520 database stop_codon 4372 4374 . + 0 transcript_id "g_465-T1.1"; gene_id "g_465-T1"; # Predicted genes for sequence number 151 on both strands # start gene g157 scaffold_12_10174547-10179520 AUGUSTUS gene 601 4374 0.09 + . g157 scaffold_12_10174547-10179520 AUGUSTUS transcript 601 4374 0.09 + . g157.t1 scaffold_12_10174547-10179520 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 628 2272 0.38 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 2380 2673 1 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 2858 3231 0.54 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 3298 3720 0.22 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 3804 3945 0.97 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 3993 4159 0.88 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS intron 4237 4326 0.99 + . transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 601 627 0.35 + 0 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 2273 2379 1 + 0 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 2674 2857 0.99 + 1 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 3232 3297 0.49 + 0 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 3721 3803 0.79 + 0 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 3946 3992 0.97 + 1 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 4160 4236 0.88 + 2 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS CDS 4327 4374 0.99 + 0 transcript_id "g157.t1"; gene_id "g157"; scaffold_12_10174547-10179520 AUGUSTUS stop_codon 4372 4374 . + 0 transcript_id "g157.t1"; gene_id "g157"; # protein sequence = [MATNSPCVVISDEEQGYDLDLFCIPKHYAADLERVYIPHGLILDRTERLAREIMKDMGGHHIVALCVLKGGYKFFADL # LDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGEIKVIGGDDLSTLTGKDIIDTGKTMKTLLQLLQQYKPKMVKVASLLVKRTPRSVGYRPDFVGFE # VPDKFVVGYALDYNEYFRDLNHICVISETGKEKYKA] # end gene g157 ### # # ----- sequence number 152 (length = 3710, name = scaffold_12_10180296-10184005) ----- # # annotation: # Sequence scaffold_12_10180296-10184005 length=3710 scaffold_12_10180296-10184005 database start_codon 601 603 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 714 935 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 1015 1098 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 1153 1429 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 1474 1639 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 1695 2068 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 2171 2272 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 2359 2519 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 2588 2735 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database intron 2833 2974 . + . transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 601 713 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 936 1014 . + 1 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 1099 1152 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 1430 1473 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 1640 1694 . + 1 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 2069 2170 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 2273 2358 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 2520 2587 . + 1 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 2736 2832 . + 2 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database CDS 2975 3110 . + 1 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; scaffold_12_10180296-10184005 database stop_codon 3108 3110 . + 0 transcript_id "g_466-T1.1"; gene_id "g_466-T1"; # Predicted genes for sequence number 152 on both strands # start gene g158 scaffold_12_10180296-10184005 AUGUSTUS gene 1012 3110 0.11 + . g158 scaffold_12_10180296-10184005 AUGUSTUS transcript 1012 3110 0.11 + . g158.t1 scaffold_12_10180296-10184005 AUGUSTUS start_codon 1012 1014 . + 0 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 1015 1098 0.65 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 1153 1429 0.87 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 1474 1639 0.86 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 1695 2068 0.65 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 2171 2272 0.73 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 2359 2519 0.71 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 2588 2735 0.92 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS intron 2833 2974 0.44 + . transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 1012 1014 0.52 + 0 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 1099 1152 0.88 + 0 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 1430 1473 0.87 + 0 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 1640 1694 0.86 + 1 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 2069 2170 0.66 + 0 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 2273 2358 0.8 + 0 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 2520 2587 0.71 + 1 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 2736 2832 1 + 2 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS CDS 2975 3110 0.44 + 1 transcript_id "g158.t1"; gene_id "g158"; scaffold_12_10180296-10184005 AUGUSTUS stop_codon 3108 3110 . + 0 transcript_id "g158.t1"; gene_id "g158"; # protein sequence = [MVPSSPIRVPSTRLHQIKQEEGVDVMNRETAHERGVQAAMQISHSWEESLNLSDNDLEKSASSSPKRIDFVPVSPAPS # PTRGIGKKQCFSPSLQILVSSNGLTPSPVPSPTRRFSSRRSQSPINCIRPSIMGPIKRKGEMETESQPKRLFQGTTTMLSSDVTQLAELNSCLSSDLL # DGSLSSVGSSSGSPAKMDGVSPSSSNSPFTPVQGRSPK] # end gene g158 ### # # ----- sequence number 153 (length = 6728, name = scaffold_12_10379676-10386403) ----- # # annotation: # Sequence scaffold_12_10379676-10386403 length=6728 scaffold_12_10379676-10386403 database start_codon 601 603 . + 0 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 677 3516 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 3580 3753 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 3946 4140 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 4318 4653 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 4778 4851 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 4974 5203 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 5384 5498 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 5633 5739 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database intron 5862 5947 . + . transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 601 676 . + 0 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 3517 3579 . + 2 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 3754 3945 . + 2 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 4141 4317 . + 2 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 4654 4777 . + 2 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 4852 4973 . + 1 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 5204 5383 . + 2 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 5499 5632 . + 2 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 5740 5861 . + 0 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database CDS 5948 6128 . + 1 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; scaffold_12_10379676-10386403 database stop_codon 6126 6128 . + 0 transcript_id "g_468-T1.1"; gene_id "g_468-T1"; # Predicted genes for sequence number 153 on both strands # start gene g159 scaffold_12_10379676-10386403 AUGUSTUS gene 3540 6128 0.29 + . g159 scaffold_12_10379676-10386403 AUGUSTUS transcript 3540 6128 0.29 + . g159.t1 scaffold_12_10379676-10386403 AUGUSTUS start_codon 3540 3542 . + 0 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 3580 3753 1 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 3946 4140 1 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 4318 4653 0.98 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 4778 4851 0.72 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 4974 5203 0.98 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 5384 5498 1 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 5633 5739 1 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS intron 5862 5947 0.99 + . transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 3540 3579 0.4 + 0 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 3754 3945 1 + 2 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 4141 4317 1 + 2 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 4654 4777 0.98 + 2 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 4852 4973 0.72 + 1 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 5204 5383 1 + 2 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 5499 5632 1 + 2 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 5740 5861 1 + 0 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS CDS 5948 6128 0.99 + 1 transcript_id "g159.t1"; gene_id "g159"; scaffold_12_10379676-10386403 AUGUSTUS stop_codon 6126 6128 . + 0 transcript_id "g159.t1"; gene_id "g159"; # protein sequence = [MPDEDYTPRLDYRTPNWCLSLSLANGEVTCFSPRGGSYRSTLGTRCLMTCDRGYRLLGRTSVQCMGNRRWSDTAHCRR # VRCRVLPLILHGSYTCTQGFVVDSRCDFTCDPGYRIEGEHSRTCLEGGSWGGSEPICADHEPPKIRCPLSRVKVAEPGKLTATVSWEAPVATDTADKT # LNVILVSELPETGFKEGANLVQYKVYDQARNRATCKFIVRVEVRRCPVLKPPLHGHITCSSDGNNYGAECEYNCDRGYEKSGASTRVCQSDHTWTHDP # AECIAMEFKADVRSVSALLEQFYEKRRLLIVSAPNILDQDYKLQNLMIQKASCGLELRHVTVIELVGSPPRGRGRIKDRLLGPEVIKGLRQALRISRS # YFNMVLLDKQGVDRERFITTTTSDELFSHIDDYLLEEEERDRLELYRDHCD] # end gene g159 ### # # ----- sequence number 154 (length = 3693, name = scaffold_12_10611687-10615379) ----- # # annotation: # Sequence scaffold_12_10611687-10615379 length=3693 scaffold_12_10611687-10615379 database start_codon 601 603 . + 0 transcript_id "g_474-T1.1"; gene_id "g_474-T1"; scaffold_12_10611687-10615379 database intron 692 835 . + . transcript_id "g_474-T1.1"; gene_id "g_474-T1"; scaffold_12_10611687-10615379 database CDS 601 691 . + 0 transcript_id "g_474-T1.1"; gene_id "g_474-T1"; scaffold_12_10611687-10615379 database CDS 836 3093 . + 2 transcript_id "g_474-T1.1"; gene_id "g_474-T1"; scaffold_12_10611687-10615379 database stop_codon 3091 3093 . + 0 transcript_id "g_474-T1.1"; gene_id "g_474-T1"; # Predicted genes for sequence number 154 on both strands # start gene g160 scaffold_12_10611687-10615379 AUGUSTUS gene 601 3093 0.6 + . g160 scaffold_12_10611687-10615379 AUGUSTUS transcript 601 3093 0.6 + . g160.t1 scaffold_12_10611687-10615379 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g160.t1"; gene_id "g160"; scaffold_12_10611687-10615379 AUGUSTUS intron 692 835 0.92 + . transcript_id "g160.t1"; gene_id "g160"; scaffold_12_10611687-10615379 AUGUSTUS CDS 601 691 0.6 + 0 transcript_id "g160.t1"; gene_id "g160"; scaffold_12_10611687-10615379 AUGUSTUS CDS 836 3093 0.99 + 2 transcript_id "g160.t1"; gene_id "g160"; scaffold_12_10611687-10615379 AUGUSTUS stop_codon 3091 3093 . + 0 transcript_id "g160.t1"; gene_id "g160"; # protein sequence = [MAEGIDKGEMPSFELVPSSEAKKRPNSSDGREEPMRKMPVSKFASRPRFEPVHFVSGGSSGGSCNDEKENDKERRRGD # TYSSTRQRELDHSSYGSSRAQSSSTVRPAFDRVSSYGFDSWADHRDRDRNRDLPMSSSSSFGGYGSRGSTSNYMTKIQQDYTGRYEAHNARHSDSYSQ # AHRADGYGGGSWSGGGWDSGRQGIGFGHQDRPSSSRAFSRVYSSPGRSSPTPSSVTGCSQPLPISQATLDEKQRLISGVAASVVVTSRDPAFVSGSDA # PNYNFILSRSIQACKTNPEYIYVNLKDIPPGDLPKNRKVPTDGYACELRCQCVYLATGYSGSKNGARDRASEQAVKLFLKPVEVRVVQRKYRHSLVND # IVVCQMHCPTPAFLPALRNPEDKPTPSSKGQYEPDKRKHWTEFVIVDNAHDAICILNNSAAFNRMKIDYKFDLVPNSSAWQCSVYLQDELVAQARGSK # KTSKHTAAEEALRKLRMNQAARQQQQQQQQQQQQQSSRGNHSDLQGGRFGQHGGRKKHLSELVILENSDNAICIINDTAQFNKVAADYKFTVLPDHRW # RCEVYLEGQYVAAGIGPKKTVKHIAAEQALATLRQTQAVVKSNLRKEGHADAISRNQILARAGEESMRQEIKEDNIGNQLLRKMGWKGGGLGREGEGI # AEPIKVKEQFSREGLGMDMDKPGHQLSKRDIEDIIRNYVSSDRQDDLRFSTELNNDERKQIHQISQKYGLRSKSYGQGRQRFLIVSRKVHKDQLIGQL # LQEGQVGRYELVKPQASH] # end gene g160 ### # # ----- sequence number 155 (length = 4366, name = scaffold_12_12305541-12309906) ----- # # annotation: # Sequence scaffold_12_12305541-12309906 length=4366 scaffold_12_12305541-12309906 database start_codon 601 603 . + 0 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database intron 770 1442 . + . transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database intron 1490 1814 . + . transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database intron 1933 2171 . + . transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database intron 2284 3594 . + . transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database CDS 601 769 . + 0 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database CDS 1443 1489 . + 2 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database CDS 1815 1932 . + 0 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database CDS 2172 2283 . + 2 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database CDS 3595 3766 . + 1 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; scaffold_12_12305541-12309906 database stop_codon 3764 3766 . + 0 transcript_id "g_478-T1.1"; gene_id "g_478-T1"; # Predicted genes for sequence number 155 on both strands # start gene g161 scaffold_12_12305541-12309906 AUGUSTUS gene 601 3766 0.61 + . g161 scaffold_12_12305541-12309906 AUGUSTUS transcript 601 3766 0.61 + . g161.t1 scaffold_12_12305541-12309906 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS intron 770 1442 1 + . transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS intron 1490 1814 1 + . transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS intron 1933 2171 1 + . transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS intron 2284 3594 0.61 + . transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS CDS 601 769 1 + 0 transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS CDS 1443 1489 1 + 2 transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS CDS 1815 1932 1 + 0 transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS CDS 2172 2283 1 + 2 transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS CDS 3595 3766 1 + 1 transcript_id "g161.t1"; gene_id "g161"; scaffold_12_12305541-12309906 AUGUSTUS stop_codon 3764 3766 . + 0 transcript_id "g161.t1"; gene_id "g161"; # protein sequence = [MADNGVHPVEEDPAAAFLAQQESEIAVIENDDEGFGVLEDTEQPPQDLAQPTAVEYDAFGEEPATVNGDMFPESNGSP # DSYAAIAQVDQLRQEPESLRKWREEQKTRLEELDSASKAAEAEWKEKAKKELEDWHVHQNEQMEKNKANNRASEEAFLAETDSDSPGTEWERVARLCD # FNPKTNKQAKDVSRMRSVLISLKQTPLVR] # end gene g161 ### # # ----- sequence number 156 (length = 6343, name = scaffold_12_12456036-12462378) ----- # # annotation: # Sequence scaffold_12_12456036-12462378 length=6343 scaffold_12_12456036-12462378 database start_codon 601 603 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 736 1405 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 1477 1604 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 1784 1912 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 1957 2151 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 2260 3501 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 3576 3780 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 3894 4419 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 4530 4629 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 4704 4833 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 4889 4998 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 5107 5207 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database intron 5306 5523 . + . transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 601 735 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 1406 1476 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 1605 1783 . + 1 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 1913 1956 . + 2 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 2152 2259 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 3502 3575 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 3781 3893 . + 1 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 4420 4529 . + 2 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 4630 4703 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 4834 4888 . + 1 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 4999 5106 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 5208 5305 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database CDS 5524 5743 . + 1 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; scaffold_12_12456036-12462378 database stop_codon 5741 5743 . + 0 transcript_id "g_481-T1.1"; gene_id "g_481-T1"; # Predicted genes for sequence number 156 on both strands # start gene g162 scaffold_12_12456036-12462378 AUGUSTUS gene 1442 5743 0.26 + . g162 scaffold_12_12456036-12462378 AUGUSTUS transcript 1442 5743 0.26 + . g162.t1 scaffold_12_12456036-12462378 AUGUSTUS start_codon 1442 1444 . + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 1477 1604 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 1784 1912 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 1957 2151 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 2260 3501 0.55 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 3576 3780 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 3894 4419 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 4530 4629 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 4704 4833 0.91 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 4904 4998 0.56 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 5107 5207 1 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS intron 5306 5523 0.98 + . transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 1442 1476 0.87 + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 1605 1783 1 + 1 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 1913 1956 1 + 2 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 2152 2259 1 + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 3502 3575 0.87 + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 3781 3893 1 + 1 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 4420 4529 1 + 2 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 4630 4703 0.91 + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 4834 4903 0.56 + 1 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 4999 5106 1 + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 5208 5305 1 + 0 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS CDS 5524 5743 0.98 + 1 transcript_id "g162.t1"; gene_id "g162"; scaffold_12_12456036-12462378 AUGUSTUS stop_codon 5741 5743 . + 0 transcript_id "g162.t1"; gene_id "g162"; # protein sequence = [MPSAEAKLKKNRCANCFDCPCCMHTLSTRATNIPAPLPDDPTKTAMKKAYYLACGFCRWTSRDVGMADKSVASGGWQE # PENTHSQRINKLIEYYQQLAQREKLERDRKKLARRRPFMPLAFSEKYGLGTRLQRQRPGAPISSLAGLSLKEGEDQKEISIEPAQALEEVEPLPEDCY # TRPINLPEVTTLRQRLLQPDFQPAGASQLHPKHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVSYIPEVRIMSIPNLRYMKVSVVKECQVL # LTLTNPVENITHVTLVGCEEGDQDDINTTAKVSVPTKELVLAGKDAAAEYDELAEPQDFQDDPDVVAFRKSNKIGFFIKVVPQRESDADVTVSFKIRH # DFRNLAAPIRPSEEGVEAPAEAIWLTHHVELSLGPLVP] # end gene g162 ### # # ----- sequence number 157 (length = 3806, name = scaffold_12_14241251-14245056) ----- # # annotation: # Sequence scaffold_12_14241251-14245056 length=3806 scaffold_12_14241251-14245056 database start_codon 601 603 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 635 723 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 795 909 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 984 1076 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 1126 1209 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 1325 1523 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 1624 1718 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 1823 1972 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 2080 2313 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 2379 2527 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 2636 2725 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database intron 2958 3083 . + . transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 601 634 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 724 794 . + 2 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 910 983 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 1077 1125 . + 1 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 1210 1324 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 1524 1623 . + 2 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 1719 1822 . + 1 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 1973 2079 . + 2 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 2314 2378 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 2528 2635 . + 1 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 2726 2957 . + 1 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database CDS 3084 3206 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; scaffold_12_14241251-14245056 database stop_codon 3204 3206 . + 0 transcript_id "g_488-T1.1"; gene_id "g_488-T1"; # Predicted genes for sequence number 157 on both strands # start gene g163 scaffold_12_14241251-14245056 AUGUSTUS gene 601 3206 0.22 + . g163 scaffold_12_14241251-14245056 AUGUSTUS transcript 601 3206 0.22 + . g163.t1 scaffold_12_14241251-14245056 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 635 723 0.44 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 795 909 1 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 984 1076 1 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 1126 1209 0.94 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 1325 1523 1 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 1624 1718 1 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 1823 1972 0.92 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 2080 2298 0.68 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 2379 2527 1 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 2636 2725 1 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS intron 2958 3083 0.97 + . transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 601 634 0.38 + 0 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 724 794 0.83 + 2 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 910 983 1 + 0 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 1077 1125 1 + 1 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 1210 1324 0.94 + 0 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 1524 1623 1 + 2 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 1719 1822 0.92 + 1 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 1973 2079 1 + 2 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 2299 2378 0.68 + 0 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 2528 2635 1 + 1 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 2726 2957 1 + 1 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS CDS 3084 3206 0.97 + 0 transcript_id "g163.t1"; gene_id "g163"; scaffold_12_14241251-14245056 AUGUSTUS stop_codon 3204 3206 . + 0 transcript_id "g163.t1"; gene_id "g163"; # protein sequence = [MDCVVTGGNVKVLAKGIHSLSRIGDELYLEPQEDGLALRSVNSSRSAYACFLFAPLFFSRYTIPRGHAFRCKMAIKCV # QAVFRSLSSLEKTVEKCHLQLDGEKSRLTFTLHCKHGLLKTHNLSFQDSESLQAVFDKGSAVNVLRAQPKLLGDTVLHFPPSLEEVTVTVSADRVWFR # NHVEEEEQSKAMLTELCLCSDEFDHFAVGCQTCVTFCLKELRRSVFQGLLMFAESASLPVSVHFDEPGKPVVLSLTDSVLEVNFVLATLSDDSQPSHH # NNNNTKRAPSPPPPDDFMNDDIDCYLIAMETSEVAGPSATCCPSPVLPVTTPLRTPANDRARLASEEEEQEDDADQTERPPNKKFRSLFFGSVFPTSS # QLTNQTINTQEVLASDSEDDAQEASP] # end gene g163 ### # # ----- sequence number 158 (length = 2419, name = scaffold_12_14881417-14883835) ----- # # annotation: # Sequence scaffold_12_14881417-14883835 length=2419 scaffold_12_14881417-14883835 database start_codon 601 603 . + 0 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database intron 661 781 . + . transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database intron 953 1068 . + . transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database intron 1169 1256 . + . transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database intron 1388 1528 . + . transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database CDS 601 660 . + 0 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database CDS 782 952 . + 0 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database CDS 1069 1168 . + 0 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database CDS 1257 1387 . + 2 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database CDS 1529 1819 . + 0 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; scaffold_12_14881417-14883835 database stop_codon 1817 1819 . + 0 transcript_id "g_490-T1.1"; gene_id "g_490-T1"; # Predicted genes for sequence number 158 on both strands # start gene g164 scaffold_12_14881417-14883835 AUGUSTUS gene 1 1819 0.37 + . g164 scaffold_12_14881417-14883835 AUGUSTUS transcript 1 1819 0.37 + . g164.t1 scaffold_12_14881417-14883835 AUGUSTUS intron 1 432 0.7 + . transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS intron 493 781 0.5 + . transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS intron 953 1068 0.97 + . transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS intron 1169 1256 1 + . transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS intron 1331 1528 0.77 + . transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS CDS 433 492 0.5 + 0 transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS CDS 782 952 0.96 + 0 transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS CDS 1069 1168 1 + 0 transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS CDS 1257 1330 0.77 + 2 transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS CDS 1529 1819 0.99 + 0 transcript_id "g164.t1"; gene_id "g164"; scaffold_12_14881417-14883835 AUGUSTUS stop_codon 1817 1819 . + 0 transcript_id "g164.t1"; gene_id "g164"; # protein sequence = [VVRPPSIGQEGQCRKEEAQVTSLSLFRQRAAVAAVTATRSRFSSDARPPEHISRYPVPYKKDLPFDIVELMEEVETKG # GFLPNVFKVLAHRPAEFRAFFTYYNELMNKETGRLTKADRELIVVATSIHNQCLYCVVIVNYENADLSPREHAMLDFAMAVCRSDTITDRHFLSLEEV # GFDREDAWDIAAIAAFFAMSNRLAHLTDMRPNAEFYNMGRMPRDKSRDQNKPEGT] # end gene g164 ### # # ----- sequence number 159 (length = 4209, name = scaffold_12_16246827-16251035) ----- # # annotation: # Sequence scaffold_12_16246827-16251035 length=4209 scaffold_12_16246827-16251035 database start_codon 601 603 . + 0 transcript_id "g_499-T1.1"; gene_id "g_499-T1"; scaffold_12_16246827-16251035 database intron 643 893 . + . transcript_id "g_499-T1.1"; gene_id "g_499-T1"; scaffold_12_16246827-16251035 database intron 973 3412 . + . transcript_id "g_499-T1.1"; gene_id "g_499-T1"; scaffold_12_16246827-16251035 database CDS 601 642 . + 0 transcript_id "g_499-T1.1"; gene_id "g_499-T1"; scaffold_12_16246827-16251035 database CDS 894 972 . + 0 transcript_id "g_499-T1.1"; gene_id "g_499-T1"; scaffold_12_16246827-16251035 database CDS 3413 3609 . + 2 transcript_id "g_499-T1.1"; gene_id "g_499-T1"; scaffold_12_16246827-16251035 database stop_codon 3607 3609 . + 0 transcript_id "g_499-T1.1"; gene_id "g_499-T1"; # Predicted genes for sequence number 159 on both strands # start gene g165 scaffold_12_16246827-16251035 AUGUSTUS gene 1207 2339 0.32 + . g165 scaffold_12_16246827-16251035 AUGUSTUS transcript 1207 2339 0.32 + . g165.t1 scaffold_12_16246827-16251035 AUGUSTUS start_codon 1207 1209 . + 0 transcript_id "g165.t1"; gene_id "g165"; scaffold_12_16246827-16251035 AUGUSTUS intron 1231 1964 0.77 + . transcript_id "g165.t1"; gene_id "g165"; scaffold_12_16246827-16251035 AUGUSTUS CDS 1207 1230 0.87 + 0 transcript_id "g165.t1"; gene_id "g165"; scaffold_12_16246827-16251035 AUGUSTUS CDS 1965 2339 0.39 + 0 transcript_id "g165.t1"; gene_id "g165"; scaffold_12_16246827-16251035 AUGUSTUS stop_codon 2337 2339 . + 0 transcript_id "g165.t1"; gene_id "g165"; # protein sequence = [MVLAVILRLLQGDPEEFSGQPRDIVPPVCPGSSPGPPPGRTCPEHLTWEASRRHLKQMPEPPPLAPLDVEEQRLYSEL # LPCDQAPQLISKGAPGHPAEKTHFDRLYPQSHPFGHYPKFMTIGESRNIDRPVN] # end gene g165 ### # start gene g166 scaffold_12_16246827-16251035 AUGUSTUS gene 2444 2959 0.36 - . g166 scaffold_12_16246827-16251035 AUGUSTUS transcript 2444 2959 0.36 - . g166.t1 scaffold_12_16246827-16251035 AUGUSTUS stop_codon 2444 2446 . - 0 transcript_id "g166.t1"; gene_id "g166"; scaffold_12_16246827-16251035 AUGUSTUS intron 2594 2716 0.37 - . transcript_id "g166.t1"; gene_id "g166"; scaffold_12_16246827-16251035 AUGUSTUS CDS 2444 2593 0.37 - 0 transcript_id "g166.t1"; gene_id "g166"; scaffold_12_16246827-16251035 AUGUSTUS CDS 2717 2959 0.42 - 0 transcript_id "g166.t1"; gene_id "g166"; scaffold_12_16246827-16251035 AUGUSTUS start_codon 2957 2959 . - 0 transcript_id "g166.t1"; gene_id "g166"; # protein sequence = [MSPALETLCMALVIQAPAPDRHLKHTAPAPYGPSCEWWACRKVIPRHLFRLYPAGFHGKRPGHQALACEHPPLAWLQG # GAPGLIAPDNIAPRIIQALKPLHHVKVACSLRVGGESLLKVEEFKCLWVLCK] # end gene g166 ### # # ----- sequence number 160 (length = 10758, name = scaffold_13_212749-223506) ----- # # annotation: # Sequence scaffold_13_212749-223506 length=10758 scaffold_13_212749-223506 database start_codon 601 603 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 672 825 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 953 1094 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 1266 1387 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 1591 1767 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 2186 2318 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 2490 2583 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 2769 2928 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 3116 3302 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 3385 3497 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 3563 3653 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 3758 3854 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 3979 4127 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 6038 6239 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 6439 7062 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 7172 7480 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 7743 8491 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 8547 8620 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 8669 9198 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 9258 9374 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 9503 9903 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database intron 9975 10080 . + . transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 601 671 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 826 952 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 1095 1265 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 1388 1590 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 1768 2185 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 2319 2489 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 2584 2768 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 2929 3115 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 3303 3384 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 3498 3562 . + 2 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 3654 3757 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 3855 3978 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 4128 6037 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 6240 6438 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 7063 7171 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 7481 7742 . + 2 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 8492 8546 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 8621 8668 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 9199 9257 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 9375 9502 . + 1 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 9904 9974 . + 2 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database CDS 10081 10158 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; scaffold_13_212749-223506 database stop_codon 10156 10158 . + 0 transcript_id "g_507-T1.1"; gene_id "g_507-T1"; # Predicted genes for sequence number 160 on both strands # start gene g167 scaffold_13_212749-223506 AUGUSTUS gene 601 10158 0.15 + . g167 scaffold_13_212749-223506 AUGUSTUS transcript 601 10158 0.15 + . g167.t1 scaffold_13_212749-223506 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 672 825 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 953 1094 0.92 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 1266 1513 0.39 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 1591 1767 0.96 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 2186 2318 0.98 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 2490 2583 0.95 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 2769 2928 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 3116 3302 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 3385 3497 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 3563 3653 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 3758 3854 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 3979 4127 0.74 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 6038 6239 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 6439 7062 0.9 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 7172 7480 1 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 7743 8491 0.55 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 8547 9198 0.54 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 9258 9374 0.98 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 9503 9903 0.89 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS intron 9975 10080 0.99 + . transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 601 671 1 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 826 952 1 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 1095 1265 0.62 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 1514 1590 0.56 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 1768 2185 1 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 2319 2489 0.98 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 2584 2768 0.97 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 2929 3115 1 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 3303 3384 1 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 3498 3562 1 + 2 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 3654 3757 1 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 3855 3978 1 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 4128 6037 0.74 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 6240 6438 1 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 7063 7171 0.9 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 7481 7742 0.57 + 2 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 8492 8546 0.55 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 9199 9257 0.92 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 9375 9502 1 + 1 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 9904 9974 0.89 + 2 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS CDS 10081 10158 0.99 + 0 transcript_id "g167.t1"; gene_id "g167"; scaffold_13_212749-223506 AUGUSTUS stop_codon 10156 10158 . + 0 transcript_id "g167.t1"; gene_id "g167"; # protein sequence = [MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVPERRVCSYSAGTDTNPIFLFNKEM # ILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQLAVKLLWKFDTAYINYQQDFEDIKLKLTKLGTAVSVMAKIPLLECLTRSSYRESID # KSSSSPGKDSDQTEEDDKSTDSVLCPSESQRSSNPPSCVSAPGTTPPGPSEGKKTNEMTDSSGLRAALQEDDASERANPPSFNVTLLDWINVQDRPND # VESVVRKCFDSINRLDPRIIQPFLAECRDTIAKLDNQNMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHAN # QLMIMLTNHRKLLDIKHKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERVRVVDALSSVPQIYCLAVVEVVRRKIFIGHYRQW # ASALVKDGKRLYEAEKYKRETFGKLFRRSFLRNRLFRGLDSWPPTSFCTRKPRRFDYELPDISLGDLQYLKTCCPTEVQPFLRVPNICDFEPLSQHVH # MLQQLVQAAQSMDMSQTITDLLSEQRMSCSQSAQTSTALAPWSESTLGPATSTSSKTPTSLSLQGLPCQPLPIPVSTLQEDLSPDSIDAQTFDFETIG # HPNMDPVLQQGSLDLDSLAESPESDFMSAVNEFVIEETLTSPQPVSDPTSPEMMVESLYSSVINAIDSKRIQDTTTLERENSKMAALKLSIEKYRSAA # EDSQSNLRSVKDDLYRFRGLVLKEQRDYGFALKTMTVEVHGLVDNIRQRREDELREYHQSQLLSLQRDHEDQLLTLTQENQLNQNIVRDMQRAVLELE # GLLERKQKELAQIEGERECWAQEETSLVERANHLEQKIGKQATEIQTLVSSRDSLATQLEQLGREMERVQAKLREELLCAERARLEELEDRLKGEHQA # LLEDLTARNQEGLEGLLADNQAKLSEVTQLHASVLGARDARLKELEDRTGNLEAELALKKAEVEDVRLLCKETERQRAGMLNAAVEAETLALGKELAG # LNQQLQARNEEYEAGLAEVKALMRLEKDHCISELVDRQEKESAQLRDMLSVLERRARDAESEHREKLQKLRCDLEQQTESLLRDKDEELRSLQEKERH # TRTVISDLQAENHQLSQRLEQDPAWQCVERKEAFKTASSDAFKDLQRQKEETERKLLDQIRQLENKLQERQSSERSPGLTLQPEAGGAGGTGAGGPLS # LDSALQERLMQEAALLHSQLELLEKRKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIITELMEKLRNVTQQQEKDKGLIETLSEDRANVMQEKKQ # LEEELSRLRNTALVSSFTPNPLTMESAGAGAGACLSEPFPEPDRLASVAAVRDEDKVDSAVEASMVTVHDNILMMSEEKQRILLLERMSQSMSSVSSR # HSEKIAIRDFQVSDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLKPASGTTRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNK # KV] # end gene g167 ### # # ----- sequence number 161 (length = 2762, name = scaffold_13_3268159-3270920) ----- # # annotation: # Sequence scaffold_13_3268159-3270920 length=2762 scaffold_13_3268159-3270920 database start_codon 601 603 . + 0 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database intron 692 1285 . + . transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database intron 1372 1607 . + . transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database intron 1679 1860 . + . transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database intron 1922 2123 . + . transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database CDS 601 691 . + 0 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database CDS 1286 1371 . + 2 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database CDS 1608 1678 . + 0 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database CDS 1861 1921 . + 1 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database CDS 2124 2162 . + 0 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; scaffold_13_3268159-3270920 database stop_codon 2160 2162 . + 0 transcript_id "g_531-T1.1"; gene_id "g_531-T1"; # Predicted genes for sequence number 161 on both strands # start gene g168 scaffold_13_3268159-3270920 AUGUSTUS gene 601 2162 0.93 + . g168 scaffold_13_3268159-3270920 AUGUSTUS transcript 601 2162 0.93 + . g168.t1 scaffold_13_3268159-3270920 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS intron 692 1285 0.98 + . transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS intron 1372 1607 1 + . transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS intron 1679 1860 0.95 + . transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS intron 1922 2123 0.95 + . transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS CDS 601 691 1 + 0 transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS CDS 1286 1371 1 + 2 transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS CDS 1608 1678 1 + 0 transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS CDS 1861 1921 0.95 + 1 transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS CDS 2124 2162 0.95 + 0 transcript_id "g168.t1"; gene_id "g168"; scaffold_13_3268159-3270920 AUGUSTUS stop_codon 2160 2162 . + 0 transcript_id "g168.t1"; gene_id "g168"; # protein sequence = [MGCTSAKQVSAVPSGEEGRSKAYSNGDLLSDEYKMKGVEKVKYINGEEGGGNNCHQDSTEKTGLLSRGQHTDNTGSNG # NGKIHIHSSESQQEFFRMLDEKIEKGRDYCSEEEDMT] # end gene g168 ### # # ----- sequence number 162 (length = 3781, name = scaffold_13_4077562-4081342) ----- # # annotation: # Sequence scaffold_13_4077562-4081342 length=3781 scaffold_13_4077562-4081342 database start_codon 601 603 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 616 1127 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 1234 1326 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 1425 1580 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 1651 1740 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 1842 1952 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 2034 2142 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 2274 2380 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 2490 2585 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 2727 2809 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 2906 3019 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database intron 3269 3361 . + . transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 601 615 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 1128 1233 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 1327 1424 . + 2 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 1581 1650 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 1741 1841 . + 2 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 1953 2033 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 2143 2273 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 2381 2489 . + 1 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 2586 2726 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 2810 2905 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 3020 3268 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database CDS 3362 3433 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; scaffold_13_4077562-4081342 database stop_codon 3431 3433 . + 0 transcript_id "g_549-T1.1"; gene_id "g_549-T1"; # Predicted genes for sequence number 162 on both strands # start gene g169 scaffold_13_4077562-4081342 AUGUSTUS gene 601 3433 0.3 + . g169 scaffold_13_4077562-4081342 AUGUSTUS transcript 601 3433 0.3 + . g169.t1 scaffold_13_4077562-4081342 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 616 1127 0.54 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 1234 1326 0.98 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 1425 1580 1 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 1651 1782 0.68 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 1842 1952 0.91 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 2034 2142 0.92 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 2274 2380 1 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 2490 2585 1 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 2727 2809 1 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 2906 3019 1 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS intron 3269 3361 0.91 + . transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 601 615 0.54 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 1128 1233 0.97 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 1327 1424 1 + 2 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 1581 1650 1 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 1783 1841 0.68 + 2 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 1953 2033 0.91 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 2143 2273 1 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 2381 2489 1 + 1 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 2586 2726 1 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 2810 2905 1 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 3020 3268 1 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS CDS 3362 3433 0.91 + 0 transcript_id "g169.t1"; gene_id "g169"; scaffold_13_4077562-4081342 AUGUSTUS stop_codon 3431 3433 . + 0 transcript_id "g169.t1"; gene_id "g169"; # protein sequence = [MLLNKVVRAGIQTGIRLQSTSATASARAATNPAAQGGFCFEFTEQQKEFQELARKFAREEIVPAAATYDRSGEYPFPI # IKRAWELGLMNSHIPEDCEELAYGCTGVQTAIEANSLGQMPVILAGNDEQRKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTRAVKVGDEYVVNGQK # MWITNGGKANWYFLLARTDSDPKCPASKAFTGFVVEADTPGILIGRKELNMGQRCSDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAG # ATGLAQRALDEATRYALERKTFGRLIAEHQAVSFLLAEMAMKVELARMAYQRSAWEVDSGRRNTYYASIAKAFAGDIANQVASDAVQVFGGNGFNSEY # PVEKLMRDAKIYQIYEGTAQIQRLIISREHFGRFKK] # end gene g169 ### # # ----- sequence number 163 (length = 3361, name = scaffold_13_4081343-4084703) ----- # # annotation: # Sequence scaffold_13_4081343-4084703 length=3361 scaffold_13_4081343-4084703 database start_codon 349 351 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 352 754 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 863 985 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 1184 1364 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 1471 1640 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 1694 1809 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 1921 2032 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 2159 2276 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database intron 2427 2620 . + . transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 349 351 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 755 862 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 986 1183 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 1365 1470 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 1641 1693 . + 2 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 1810 1920 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 2033 2158 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 2277 2426 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database CDS 2621 2761 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; scaffold_13_4081343-4084703 database stop_codon 2759 2761 . + 0 transcript_id "g_550-T1.1"; gene_id "g_550-T1"; # Predicted genes for sequence number 163 on both strands # start gene g170 scaffold_13_4081343-4084703 AUGUSTUS gene 1 2761 0.93 + . g170 scaffold_13_4081343-4084703 AUGUSTUS transcript 1 2761 0.93 + . g170.t1 scaffold_13_4081343-4084703 AUGUSTUS intron 1 754 0.96 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 863 985 1 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 1184 1364 1 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 1471 1640 1 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 1694 1809 1 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 1921 2032 1 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 2159 2276 0.97 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS intron 2427 2620 1 + . transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 755 862 1 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 986 1183 1 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 1365 1470 1 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 1641 1693 1 + 2 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 1810 1920 1 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 2033 2158 1 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 2277 2426 0.97 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS CDS 2621 2761 1 + 0 transcript_id "g170.t1"; gene_id "g170"; scaffold_13_4081343-4084703 AUGUSTUS stop_codon 2759 2761 . + 0 transcript_id "g170.t1"; gene_id "g170"; # protein sequence = [GTQVKDVVIKPDAPSTLFLDKHADYIAAYGAKKDDYEYTLSEYLRMSGIYWGLTVMDLMGQLARMNREEITDFIKSCQ # HECGGISASIGHDPHLLYTLSAVQILSLYDDVSVIDVDKVVEYIRGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDAINVDKAVEFVLSCMNF # DGGFGCRPGSESHAGQIYCCTGFLSLTGQLHQINADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDKSKLRSFILACQDDET # GGFADRPGDMVDPFHTLFGVAGLSLMGDEQIKPVNPVLCMPEDVLQRIGLHPDTLT] # end gene g170 ### # # ----- sequence number 164 (length = 11563, name = scaffold_13_5330657-5342219) ----- # # annotation: # Sequence scaffold_13_5330657-5342219 length=11563 scaffold_13_5330657-5342219 database start_codon 601 603 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 673 3219 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 3411 4355 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 4446 5590 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 5634 6246 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 6370 6809 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 6933 7345 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 7442 7658 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 7761 8170 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 8333 8557 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 8656 9154 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 9291 9562 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 9686 10091 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database intron 10194 10909 . + . transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 601 672 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 3220 3410 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 4356 4445 . + 1 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 5591 5633 . + 1 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 6247 6369 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 6810 6932 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 7346 7441 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 7659 7760 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 8171 8332 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 8558 8655 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 9155 9290 . + 1 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 9563 9685 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 10092 10193 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database CDS 10910 10963 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; scaffold_13_5330657-5342219 database stop_codon 10961 10963 . + 0 transcript_id "g_567-T1.1"; gene_id "g_567-T1"; # Predicted genes for sequence number 164 on both strands # start gene g171 scaffold_13_5330657-5342219 AUGUSTUS gene 5607 10991 0.35 + . g171 scaffold_13_5330657-5342219 AUGUSTUS transcript 5607 10991 0.35 + . g171.t1 scaffold_13_5330657-5342219 AUGUSTUS start_codon 5607 5609 . + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 5634 6246 0.86 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 6370 6809 0.91 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 6933 7345 0.97 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 7442 7658 1 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 7761 8170 1 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 8333 8557 1 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 8656 9154 1 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 9291 9562 1 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 9686 10091 1 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS intron 10214 10909 0.74 + . transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 5607 5633 0.46 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 6247 6369 0.93 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 6810 6932 0.91 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 7346 7441 1 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 7659 7760 1 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 8171 8332 1 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 8558 8655 1 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 9155 9290 1 + 1 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 9563 9685 1 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 10092 10213 0.74 + 0 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS CDS 10910 10991 0.74 + 1 transcript_id "g171.t1"; gene_id "g171"; scaffold_13_5330657-5342219 AUGUSTUS stop_codon 10989 10991 . + 0 transcript_id "g171.t1"; gene_id "g171"; # protein sequence = [MADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAIKRPMKQKRKLRLYISNTFNPAKPEPDDSDGSIA # SWELRVEGKLLEDPGKLKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ # TRSCIIQALWQYIKTNKLQDSHEKEYINCDKYLQQIFDCQRLKFSEIPQRLTNMLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSGFL # LSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSKDPKGYIQDWLCSQNRDLKLMTDVMGNPEEERRAEFYDQPWSQEAVSRYFYCKVRSQLLIF # NNADKSWIRPYLFVTPKAVAEEAVT] # end gene g171 ### # # ----- sequence number 165 (length = 3265, name = scaffold_13_5870874-5874138) ----- # # annotation: # Sequence scaffold_13_5870874-5874138 length=3265 scaffold_13_5870874-5874138 database start_codon 601 603 . + 0 transcript_id "g_575-T1.1"; gene_id "g_575-T1"; scaffold_13_5870874-5874138 database intron 840 1828 . + . transcript_id "g_575-T1.1"; gene_id "g_575-T1"; scaffold_13_5870874-5874138 database intron 2038 2474 . + . transcript_id "g_575-T1.1"; gene_id "g_575-T1"; scaffold_13_5870874-5874138 database CDS 601 839 . + 0 transcript_id "g_575-T1.1"; gene_id "g_575-T1"; scaffold_13_5870874-5874138 database CDS 1829 2037 . + 1 transcript_id "g_575-T1.1"; gene_id "g_575-T1"; scaffold_13_5870874-5874138 database CDS 2475 2665 . + 2 transcript_id "g_575-T1.1"; gene_id "g_575-T1"; scaffold_13_5870874-5874138 database stop_codon 2663 2665 . + 0 transcript_id "g_575-T1.1"; gene_id "g_575-T1"; # Predicted genes for sequence number 165 on both strands # start gene g172 scaffold_13_5870874-5874138 AUGUSTUS gene 1866 2665 0.99 + . g172 scaffold_13_5870874-5874138 AUGUSTUS transcript 1866 2665 0.99 + . g172.t1 scaffold_13_5870874-5874138 AUGUSTUS start_codon 1866 1868 . + 0 transcript_id "g172.t1"; gene_id "g172"; scaffold_13_5870874-5874138 AUGUSTUS intron 2038 2474 1 + . transcript_id "g172.t1"; gene_id "g172"; scaffold_13_5870874-5874138 AUGUSTUS CDS 1866 2037 0.99 + 0 transcript_id "g172.t1"; gene_id "g172"; scaffold_13_5870874-5874138 AUGUSTUS CDS 2475 2665 1 + 2 transcript_id "g172.t1"; gene_id "g172"; scaffold_13_5870874-5874138 AUGUSTUS stop_codon 2663 2665 . + 0 transcript_id "g172.t1"; gene_id "g172"; # protein sequence = [MFQIEQKTKLCSKIALTQAWDPFDIPKNSTYEDQYFIGGPGDMVEVQEWSDRKPARQHEAWVGVYTVKDCYPVQETYT # KNSSVTTSTRFFDLELGISDPAVFTPPSTCQSARLERMHSDC] # end gene g172 ### # # ----- sequence number 166 (length = 2152, name = scaffold_13_6572644-6574795) ----- # # annotation: # Sequence scaffold_13_6572644-6574795 length=2152 scaffold_13_6572644-6574795 database start_codon 601 603 . + 0 transcript_id "g_583-T1.1"; gene_id "g_583-T1"; scaffold_13_6572644-6574795 database intron 763 1399 . + . transcript_id "g_583-T1.1"; gene_id "g_583-T1"; scaffold_13_6572644-6574795 database CDS 601 762 . + 0 transcript_id "g_583-T1.1"; gene_id "g_583-T1"; scaffold_13_6572644-6574795 database CDS 1400 1552 . + 0 transcript_id "g_583-T1.1"; gene_id "g_583-T1"; scaffold_13_6572644-6574795 database stop_codon 1550 1552 . + 0 transcript_id "g_583-T1.1"; gene_id "g_583-T1"; # Predicted genes for sequence number 166 on both strands # start gene g173 scaffold_13_6572644-6574795 AUGUSTUS gene 1 1552 0.94 + . g173 scaffold_13_6572644-6574795 AUGUSTUS transcript 1 1552 0.94 + . g173.t1 scaffold_13_6572644-6574795 AUGUSTUS intron 1 571 0.94 + . transcript_id "g173.t1"; gene_id "g173"; scaffold_13_6572644-6574795 AUGUSTUS intron 763 1399 1 + . transcript_id "g173.t1"; gene_id "g173"; scaffold_13_6572644-6574795 AUGUSTUS CDS 572 762 1 + 2 transcript_id "g173.t1"; gene_id "g173"; scaffold_13_6572644-6574795 AUGUSTUS CDS 1400 1552 1 + 0 transcript_id "g173.t1"; gene_id "g173"; scaffold_13_6572644-6574795 AUGUSTUS stop_codon 1550 1552 . + 0 transcript_id "g173.t1"; gene_id "g173"; # protein sequence = [DFAVLLKAGMTVRQAILYNVLSAMMAYLGMITGILIGHYAENVSMWIFALTAGLFMYVALVDMVPEMLHNDAGDHGFS # HCGFFLLQNAGILLGFAIMLLIAIFEHKIRLDINI] # end gene g173 ### # # ----- sequence number 167 (length = 2798, name = scaffold_13_7905543-7908340) ----- # # annotation: # Sequence scaffold_13_7905543-7908340 length=2798 scaffold_13_7905543-7908340 database start_codon 601 603 . + 0 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database intron 668 854 . + . transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database intron 1032 1177 . + . transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database intron 1277 1352 . + . transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database intron 1446 1547 . + . transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database intron 1705 1847 . + . transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database intron 1964 2155 . + . transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 601 667 . + 0 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 855 1031 . + 2 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 1178 1276 . + 2 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 1353 1445 . + 2 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 1548 1704 . + 2 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 1848 1963 . + 1 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database CDS 2156 2232 . + 2 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; scaffold_13_7905543-7908340 database stop_codon 2230 2232 . + 0 transcript_id "g_599-T1.1"; gene_id "g_599-T1"; # Predicted genes for sequence number 167 on both strands # start gene g174 scaffold_13_7905543-7908340 AUGUSTUS gene 1 2783 0.4 + . g174 scaffold_13_7905543-7908340 AUGUSTUS transcript 1 2783 0.4 + . g174.t1 scaffold_13_7905543-7908340 AUGUSTUS intron 1 290 0.68 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 386 600 0.68 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 668 854 0.95 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 1032 1177 0.99 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 1277 1547 0.69 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 1705 1847 1 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 1964 2383 1 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS intron 2524 2681 0.93 + . transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 291 385 0.68 + 2 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 601 667 0.85 + 0 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 855 1031 0.95 + 2 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 1178 1276 1 + 2 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 1548 1704 0.98 + 2 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 1848 1963 1 + 1 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 2384 2523 1 + 2 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS CDS 2682 2783 0.93 + 0 transcript_id "g174.t1"; gene_id "g174"; scaffold_13_7905543-7908340 AUGUSTUS stop_codon 2781 2783 . + 0 transcript_id "g174.t1"; gene_id "g174"; # protein sequence = [AIYSLDAELKSTKSLFHNTRKQLQKAEEDSRMALALFDRALGAIIGSAVADAAAQPLHWVYDLQKLADLLANESYPEF # RPNSANPFYKRETGTQSCYGDQAYVLLESLSECGGLNVDDLKKRTYKCFGPGSEYDTPVNDPYREKGGCDTDTQIDGIAKMAPIVAFYAGKPNMLEKV # EDAIRVTQNSDECVAETLAAARFLEYFILNGPEPNAVDSVVDQLTDPDRKQPQDLDKAVVGLPGAFQAALHGVLTAKEYEQAIRDTMCCGGCTCSRSS # FIGACLGAQFGLQGISNSWKTKTLRYNDLLLHAKKVTEHHQM] # end gene g174 ### # # ----- sequence number 168 (length = 8138, name = scaffold_13_7970579-7978716) ----- # # annotation: # Sequence scaffold_13_7970579-7978716 length=8138 scaffold_13_7970579-7978716 database start_codon 601 603 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 671 1364 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 1478 2080 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 2190 3009 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 3152 4423 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 4480 4652 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 4763 4847 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 4950 5121 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 5256 5360 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 5410 5652 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 5719 5906 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 6030 6274 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 6311 6520 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 6653 6749 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 6806 6912 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 6966 7087 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 7157 7276 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database intron 7342 7463 . + . transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 601 670 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 1365 1477 . + 2 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 2081 2189 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 3010 3151 . + 2 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 4424 4479 . + 1 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 4653 4762 . + 2 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 4848 4949 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 5122 5255 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 5361 5409 . + 1 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 5653 5718 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 5907 6029 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 6275 6310 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 6521 6652 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 6750 6805 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 6913 6965 . + 1 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 7088 7156 . + 2 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 7277 7341 . + 2 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database CDS 7464 7538 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; scaffold_13_7970579-7978716 database stop_codon 7536 7538 . + 0 transcript_id "g_601-T1.1"; gene_id "g_601-T1"; # Predicted genes for sequence number 168 on both strands # start gene g175 scaffold_13_7970579-7978716 AUGUSTUS gene 601 7538 0.28 + . g175 scaffold_13_7970579-7978716 AUGUSTUS transcript 601 7538 0.28 + . g175.t1 scaffold_13_7970579-7978716 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 671 1364 0.94 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 1478 2080 1 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 2190 3009 1 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 3152 4423 0.98 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 4480 4652 1 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 4763 4847 0.99 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 4950 5121 0.78 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 5256 5360 1 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 5410 5652 1 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 5719 5906 1 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 6030 6274 0.64 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 6311 6536 0.55 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 6653 6912 0.85 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 6966 7087 0.97 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 7157 7276 0.76 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS intron 7342 7463 0.68 + . transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 601 670 0.94 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 1365 1477 1 + 2 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 2081 2189 1 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 3010 3151 1 + 2 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 4424 4479 1 + 1 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 4653 4762 0.99 + 2 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 4848 4949 1 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 5122 5255 0.78 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 5361 5409 1 + 1 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 5653 5718 1 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 5907 6029 1 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 6275 6310 0.64 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 6537 6652 0.87 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 6913 6965 1 + 1 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 7088 7156 0.86 + 2 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 7277 7341 0.74 + 2 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS CDS 7464 7538 0.68 + 0 transcript_id "g175.t1"; gene_id "g175"; scaffold_13_7970579-7978716 AUGUSTUS stop_codon 7536 7538 . + 0 transcript_id "g175.t1"; gene_id "g175"; # protein sequence = [MAEDQSTQTWSINKDDYVLNEVIGSGATAVVQAAYCEPRKERVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY # YTSFVVKDELWLVMKLLSGGSVLDIIKHIISRGEHKNGVLDESSIATILREVLEGLEYLHKNGQIHRDLKAGNILLGDDGSVQIADFGVSAFLAAGGD # MTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGITDKDMVKKYGKSFRKMISLCLQK # DPEKRPTAAELLKHKFFTKAKNNEYLEEKLLQKGPTITDRSKKVRRVPGSSGRLHKTEDGEWEWSDDELDEESEEGKAAVAALRSPRVKDGSQNLEME # ALASFSLQVQSRSPQTLARPQQKPPRQQASHRAPLHRNLKKELNDIRFEFMPGRDSADGVSQELVSAGLVDGKDLVVVAANLQKIVDDPQNNKNVTFK # LASGLDESEIPDDVKLMGFAQLSIS] # end gene g175 ### # # ----- sequence number 169 (length = 4002, name = scaffold_13_9238223-9242224) ----- # # annotation: # Sequence scaffold_13_9238223-9242224 length=4002 scaffold_13_9238223-9242224 database start_codon 601 603 . + 0 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 606 1360 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 1627 1744 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 1818 2138 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 2190 2308 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 2512 2712 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 2827 3028 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database intron 3172 3288 . + . transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 601 605 . + 0 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 1361 1626 . + 1 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 1745 1817 . + 2 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 2139 2189 . + 1 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 2309 2511 . + 1 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 2713 2826 . + 2 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 3029 3171 . + 2 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database CDS 3289 3402 . + 0 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; scaffold_13_9238223-9242224 database stop_codon 3400 3402 . + 0 transcript_id "g_621-T1.1"; gene_id "g_621-T1"; # Predicted genes for sequence number 169 on both strands # start gene g176 scaffold_13_9238223-9242224 AUGUSTUS gene 1 3402 0.28 + . g176 scaffold_13_9238223-9242224 AUGUSTUS transcript 1 3402 0.28 + . g176.t1 scaffold_13_9238223-9242224 AUGUSTUS intron 1 1360 0.36 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS intron 1627 1744 0.93 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS intron 1818 2138 0.92 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS intron 2190 2308 0.93 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS intron 2512 2712 1 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS intron 2827 3028 1 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS intron 3172 3288 1 + . transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 1361 1626 0.86 + 1 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 1745 1817 0.92 + 2 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 2139 2189 0.93 + 1 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 2309 2511 1 + 1 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 2713 2826 1 + 2 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 3029 3171 1 + 2 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS CDS 3289 3402 1 + 0 transcript_id "g176.t1"; gene_id "g176"; scaffold_13_9238223-9242224 AUGUSTUS stop_codon 3400 3402 . + 0 transcript_id "g176.t1"; gene_id "g176"; # protein sequence = [RSPTTSSLMASNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFSKYGKIVGCSVHKGFAFVQYANERNARAAVAGE # DGRMIVGQVLDINLAGEPKPHRSKTTKRSAGDMYSGSSFDLDYDFQRDYYDRVYSYPSRVPPPPPPLSRAVIPSKRPRVSMSGGGGGGGGGGGGGGSR # RTKTSSFSSYKSSQRTSSSRTMKVDELQTIKRELTQIKHKVDYLLESLDRMEKDHSKKSEGKSSKPEPGEVSSMQISNTKKDESNKRERERDLNDTDE # EGDLLEDEELKSQEREEDEDEDEEEEGEHVDGDDDDGESVNGDEDS] # end gene g176 ### # # ----- sequence number 170 (length = 7795, name = scaffold_13_10043582-10051376) ----- # # annotation: # Sequence scaffold_13_10043582-10051376 length=7795 scaffold_13_10043582-10051376 database start_codon 601 603 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 620 1108 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 1209 1392 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 1467 1596 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 1741 1873 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 1947 2057 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 2227 2338 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 2541 2648 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 2711 2898 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 2932 3084 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 3137 3224 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 3284 3373 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 3455 3561 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 3631 3721 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 3797 3919 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 4055 4146 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 4267 4380 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 4482 4622 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 4761 4865 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 5077 5242 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 5313 5641 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 5824 6038 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 6174 6382 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 6473 6573 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 6707 6814 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database intron 6951 7107 . + . transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 601 619 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 1109 1208 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 1393 1466 . + 1 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 1597 1740 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 1874 1946 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 2058 2226 . + 1 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 2339 2540 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 2649 2710 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 2899 2931 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 3085 3136 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 3225 3283 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 3374 3454 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 3562 3630 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 3722 3796 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 3920 4054 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 4147 4266 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 4381 4481 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 4623 4760 . + 1 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 4866 5076 . + 1 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 5243 5312 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 5642 5823 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 6039 6173 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 6383 6472 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 6574 6706 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 6815 6950 . + 2 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database CDS 7108 7195 . + 1 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; scaffold_13_10043582-10051376 database stop_codon 7193 7195 . + 0 transcript_id "g_626-T1.1"; gene_id "g_626-T1"; # Predicted genes for sequence number 170 on both strands # start gene g177 scaffold_13_10043582-10051376 AUGUSTUS gene 601 7195 0.06 + . g177 scaffold_13_10043582-10051376 AUGUSTUS transcript 601 7195 0.06 + . g177.t1 scaffold_13_10043582-10051376 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 620 1596 0.25 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 1741 1873 0.74 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 1947 2057 0.88 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 2227 2338 0.82 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 2541 2648 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 2711 3084 0.95 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 3137 3224 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 3284 3373 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 3455 3561 0.96 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 3631 3721 0.52 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 3797 3919 0.56 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 4055 4146 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 4267 4380 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 4482 4622 0.93 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 4761 4865 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 5077 5242 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 5313 5641 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 5824 6038 0.78 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 6174 6382 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 6473 6573 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 6707 6814 1 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS intron 6951 7107 0.98 + . transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 601 619 0.38 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 1597 1740 0.82 + 2 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 1874 1946 0.76 + 2 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 2058 2226 0.88 + 1 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 2339 2540 0.82 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 2649 2710 1 + 2 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 3085 3136 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 3225 3283 1 + 2 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 3374 3454 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 3562 3630 0.96 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 3722 3796 0.56 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 3920 4054 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 4147 4266 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 4381 4481 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 4623 4760 0.93 + 1 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 4866 5076 1 + 1 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 5243 5312 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 5642 5823 0.78 + 2 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 6039 6173 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 6383 6472 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 6574 6706 1 + 0 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 6815 6950 1 + 2 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS CDS 7108 7195 0.98 + 1 transcript_id "g177.t1"; gene_id "g177"; scaffold_13_10043582-10051376 AUGUSTUS stop_codon 7193 7195 . + 0 transcript_id "g177.t1"; gene_id "g177"; # protein sequence = [MDNAEEVYSPDMPSRLPVQDIFAGLVTSVGTAVRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSVSSLLTLPLDMLS # TENLLADSLQGCFVVTCTLCAFISLVWLREQIVHGGAPHWLEQNLQQPPNPPARPDEQEGPGEREHGPGAEAGAGAEADPPGDQARVGEAPDEGLDPG # EDGELENEDEDEAGVDDGVDGNNGGQDDLNWNALEWDRAAEELTWEREHVFWVVSLNTLFILVFAFCPYHIGHFSVVGLGFEEYVRASHFEGLITTIV # GYILLAATLILCHGLAALVRFQRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDREVSFQSSPGTTMFLHWLVGMVYVFYFA # SFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFILSVVVFGTIVLLMLWLPIRIIKLFLPTFLPYNVMLYSDAPVSELSLELLLLQV # VLPALLEQGHTRQWLKGLVRAWTLTTGYLLDLHSYLLGEQGDEDNDANHHNNNNNLPGRNNNHVFPGIGEGLHAAHQAILQQGGPVGFQPYQRPTRFF # ARIVLLIVLMCLTLLLASLVCLTLPVCAGRWLMSFWMGSSKIHELYTAACGLYVCWLSIRGLSVLLAWMPRGHTIIMLKVQEWTLMILKTLMVAVLLA # GVIPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRQIDLQFIVQKLAAPVITVLLLSLCVPYA # IASGIVPLLGVTLEMQTVVSRRIYPCLLMVVALLGILSFQIRQFRRLYEHIKNDKYLVGQRLVNYERKTGRSLSGAHSGSTLN] # end gene g177 ### # # ----- sequence number 171 (length = 2791, name = scaffold_13_11363225-11366015) ----- # # annotation: # Sequence scaffold_13_11363225-11366015 length=2791 scaffold_13_11363225-11366015 database start_codon 601 603 . + 0 transcript_id "g_630-T1.1"; gene_id "g_630-T1"; scaffold_13_11363225-11366015 database intron 627 1366 . + . transcript_id "g_630-T1.1"; gene_id "g_630-T1"; scaffold_13_11363225-11366015 database intron 1869 2083 . + . transcript_id "g_630-T1.1"; gene_id "g_630-T1"; scaffold_13_11363225-11366015 database CDS 601 626 . + 0 transcript_id "g_630-T1.1"; gene_id "g_630-T1"; scaffold_13_11363225-11366015 database CDS 1367 1868 . + 1 transcript_id "g_630-T1.1"; gene_id "g_630-T1"; scaffold_13_11363225-11366015 database CDS 2084 2191 . + 0 transcript_id "g_630-T1.1"; gene_id "g_630-T1"; scaffold_13_11363225-11366015 database stop_codon 2189 2191 . + 0 transcript_id "g_630-T1.1"; gene_id "g_630-T1"; # Predicted genes for sequence number 171 on both strands # start gene g178 scaffold_13_11363225-11366015 AUGUSTUS gene 601 2191 0.83 + . g178 scaffold_13_11363225-11366015 AUGUSTUS transcript 601 2191 0.83 + . g178.t1 scaffold_13_11363225-11366015 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g178.t1"; gene_id "g178"; scaffold_13_11363225-11366015 AUGUSTUS intron 627 1366 0.83 + . transcript_id "g178.t1"; gene_id "g178"; scaffold_13_11363225-11366015 AUGUSTUS intron 1869 2083 1 + . transcript_id "g178.t1"; gene_id "g178"; scaffold_13_11363225-11366015 AUGUSTUS CDS 601 626 0.86 + 0 transcript_id "g178.t1"; gene_id "g178"; scaffold_13_11363225-11366015 AUGUSTUS CDS 1367 1868 0.96 + 1 transcript_id "g178.t1"; gene_id "g178"; scaffold_13_11363225-11366015 AUGUSTUS CDS 2084 2191 1 + 0 transcript_id "g178.t1"; gene_id "g178"; scaffold_13_11363225-11366015 AUGUSTUS stop_codon 2189 2191 . + 0 transcript_id "g178.t1"; gene_id "g178"; # protein sequence = [MEEDQTVVVGLLVWVLAVLLGLFCSLDVWYFLRSGLTVVRAWFQPVVRDILLEQSVSGLVAPHDMDLCHMNNARYLRE # CDFARYSLYTRNGVFKALRALGASMVVGATTIRYRRALYVGERFELRSRIVAWDDKSFYLEQRFVSSKDDRVSAVMLCKQNIIRSSPDNIMQFLCKRK # VECPEYPEDLKHWISYIAASSQALRAESGLEEKDK] # end gene g178 ### # # ----- sequence number 172 (length = 3857, name = scaffold_13_11368859-11372715) ----- # # annotation: # Sequence scaffold_13_11368859-11372715 length=3857 scaffold_13_11368859-11372715 database start_codon 601 603 . + 0 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database intron 1198 1478 . + . transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database intron 1575 1669 . + . transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database intron 1904 2142 . + . transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database intron 2303 2407 . + . transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database intron 2480 2755 . + . transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database intron 2858 3192 . + . transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 601 1197 . + 0 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 1479 1574 . + 0 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 1670 1903 . + 0 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 2143 2302 . + 0 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 2408 2479 . + 2 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 2756 2857 . + 2 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database CDS 3193 3257 . + 2 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; scaffold_13_11368859-11372715 database stop_codon 3255 3257 . + 0 transcript_id "g_631-T1.1"; gene_id "g_631-T1"; # Predicted genes for sequence number 172 on both strands # start gene g179 scaffold_13_11368859-11372715 AUGUSTUS gene 814 3257 0.28 + . g179 scaffold_13_11368859-11372715 AUGUSTUS transcript 814 3257 0.28 + . g179.t1 scaffold_13_11368859-11372715 AUGUSTUS start_codon 814 816 . + 0 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS intron 1093 1478 0.66 + . transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS intron 1575 1669 1 + . transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS intron 1904 2142 1 + . transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS intron 2303 2755 0.98 + . transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS intron 2858 3192 0.78 + . transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS CDS 814 1092 0.45 + 0 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS CDS 1479 1574 0.97 + 0 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS CDS 1670 1903 1 + 0 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS CDS 2143 2302 1 + 0 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS CDS 2756 2857 0.98 + 2 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS CDS 3193 3257 0.78 + 2 transcript_id "g179.t1"; gene_id "g179"; scaffold_13_11368859-11372715 AUGUSTUS stop_codon 3255 3257 . + 0 transcript_id "g179.t1"; gene_id "g179"; # protein sequence = [MLADVVEKFLMTGLQSDPPTRSYAGPEDVECDVCTGSGRKNKAVKTCLVCLASYCETHVQPHYDSPAFKKHKLVVASK # KLQDTICPRHDKLLETQLGEMQRNSQQQIQVREKDLQELRNAIADLTRSARSTVEESEKVFTDLIQSIELKRFELRELIRDQEKAAISQAEGLLAKLE # QEIAELKRRDSDLEDLSHTDDHITFLQNCQSFRSCPVMEKLSPVNFDPNFTFRSVMTAVSEFKELLEEVYQGGFVNIYEKVAAAPAGDQATSCHNPFL # SQGVPVPNFGFAISPFGSRLSGPRHRPLQRRSHPRRK] # end gene g179 ### # # ----- sequence number 173 (length = 3158, name = scaffold_13_15147142-15150299) ----- # # annotation: # Sequence scaffold_13_15147142-15150299 length=3158 scaffold_13_15147142-15150299 database start_codon 601 603 . + 0 transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database intron 649 1012 . + . transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database intron 1109 2009 . + . transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database intron 2172 2525 . + . transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database CDS 601 648 . + 0 transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database CDS 1013 1108 . + 0 transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database CDS 2010 2171 . + 0 transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database CDS 2526 2558 . + 0 transcript_id "g_645-T1.1"; gene_id "g_645-T1"; scaffold_13_15147142-15150299 database stop_codon 2556 2558 . + 0 transcript_id "g_645-T1.1"; gene_id "g_645-T1"; # Predicted genes for sequence number 173 on both strands # start gene g180 scaffold_13_15147142-15150299 AUGUSTUS gene 601 2787 0.41 + . g180 scaffold_13_15147142-15150299 AUGUSTUS transcript 601 2787 0.41 + . g180.t1 scaffold_13_15147142-15150299 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS intron 649 1012 1 + . transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS intron 1109 2009 0.98 + . transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS intron 2172 2760 0.66 + . transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS CDS 601 648 0.6 + 0 transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS CDS 1013 1108 1 + 0 transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS CDS 2010 2171 0.99 + 0 transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS CDS 2761 2787 0.68 + 0 transcript_id "g180.t1"; gene_id "g180"; scaffold_13_15147142-15150299 AUGUSTUS stop_codon 2785 2787 . + 0 transcript_id "g180.t1"; gene_id "g180"; # protein sequence = [MVFENKMIKYDDPDDEEEAPAEEEEEAEGGEGGDEEEEEEEEEEEDMVDPLETIRTKCEQAEHCAHTRHRLEACEQRV # SSRDDTEEDCTEELFDFLHARDHCNEDAVSLA] # end gene g180 ### # # ----- sequence number 174 (length = 5298, name = scaffold_13_16429069-16434366) ----- # # annotation: # Sequence scaffold_13_16429069-16434366 length=5298 scaffold_13_16429069-16434366 database start_codon 601 603 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database intron 658 2179 . + . transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database intron 2302 2926 . + . transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database intron 2994 3172 . + . transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database intron 3311 3606 . + . transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database intron 3724 4150 . + . transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database intron 4298 4398 . + . transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 601 657 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 2180 2301 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 2927 2993 . + 1 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 3173 3310 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 3607 3723 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 4151 4297 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database CDS 4399 4698 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; scaffold_13_16429069-16434366 database stop_codon 4696 4698 . + 0 transcript_id "g_652-T1.1"; gene_id "g_652-T1"; # Predicted genes for sequence number 174 on both strands # start gene g181 scaffold_13_16429069-16434366 AUGUSTUS gene 601 4698 0.54 + . g181 scaffold_13_16429069-16434366 AUGUSTUS transcript 601 4698 0.54 + . g181.t1 scaffold_13_16429069-16434366 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS intron 658 2179 0.65 + . transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS intron 2302 2926 1 + . transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS intron 2994 3172 1 + . transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS intron 3311 3606 0.89 + . transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS intron 3724 4150 0.97 + . transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS intron 4298 4398 1 + . transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 601 657 0.79 + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 2180 2301 1 + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 2927 2993 1 + 1 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 3173 3310 0.99 + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 3607 3723 0.87 + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 4151 4297 1 + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS CDS 4399 4698 1 + 0 transcript_id "g181.t1"; gene_id "g181"; scaffold_13_16429069-16434366 AUGUSTUS stop_codon 4696 4698 . + 0 transcript_id "g181.t1"; gene_id "g181"; # protein sequence = [MSGFNRGPAYGFSAEVKSKIAQKYDPQREEELRIWIEDVTGCSVGDDFQKGLKNGVILCNLINKLQPGSVKKINQSSM # NWHQLENLTNFIKAITVFGLKPHDIFEANDLFESGNMTQVQTTLLALAGMAKTKGQLSRVDIGVKYADKQERAFDDEKMKAGQCVIGLQMGTNKCASQ # AGMNAYGTRRHLYDPKAHILPPMDNSTISLQMGTNKGASQAGMTAPGTRRAIYDQKLGTDRCDNSTMSLQMGSNQGASQSGQNFGLGRQIYDAKYCPK # NQEGEENGAGAGEYVPDYHDEGYQGYQEEEPVVYQEEGAEY] # end gene g181 ### # # ----- sequence number 175 (length = 5315, name = scaffold_14_6368943-6374257) ----- # # annotation: # Sequence scaffold_14_6368943-6374257 length=5315 scaffold_14_6368943-6374257 database start_codon 601 603 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 658 857 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 1015 1270 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 1507 1837 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 1994 2511 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 2688 3326 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 3448 3786 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 3855 4133 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database intron 4214 4602 . + . transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 601 657 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 858 1014 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 1271 1506 . + 2 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 1838 1993 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 2512 2687 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 3327 3447 . + 1 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 3787 3854 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 4134 4213 . + 1 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database CDS 4603 4715 . + 2 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; scaffold_14_6368943-6374257 database stop_codon 4713 4715 . + 0 transcript_id "g_695-T1.1"; gene_id "g_695-T1"; # Predicted genes for sequence number 175 on both strands # start gene g182 scaffold_14_6368943-6374257 AUGUSTUS gene 601 4715 0.72 + . g182 scaffold_14_6368943-6374257 AUGUSTUS transcript 601 4715 0.72 + . g182.t1 scaffold_14_6368943-6374257 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 658 857 1 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 1015 1270 0.99 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 1507 1837 1 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 1994 2511 0.73 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 2688 3326 0.99 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 3448 3786 1 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 3855 4133 1 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS intron 4214 4602 1 + . transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 601 657 0.99 + 0 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 858 1014 1 + 0 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 1271 1506 1 + 2 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 1838 1993 0.73 + 0 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 2512 2687 0.73 + 0 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 3327 3447 1 + 1 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 3787 3854 1 + 0 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 4134 4213 1 + 1 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS CDS 4603 4715 1 + 2 transcript_id "g182.t1"; gene_id "g182"; scaffold_14_6368943-6374257 AUGUSTUS stop_codon 4713 4715 . + 0 transcript_id "g182.t1"; gene_id "g182"; # protein sequence = [MATLPKEPCEDVKKQSFWMPRNYERTVRRTDQSHQACNDIVACFQERAKVEKLYSQQLSQWSSKWKAIVDSRPLYGSL # MRAWQCFFSSTERLAVLHAAISQSLIVEDGDRVKIWQKETFPRKIFCGFRETYQNKTEFSRAQKPWTKRMTKLEKACGAYHKACQKEQAAVDRERQAK # ENTELSPEKQKKIEEARVRATEEKEKVRERYEKMLEDVTSYTPRYMEEMEAIFDQSQEEERKRISFLKQAFLSIHRHLDITNNDSVKAVYSELHHTLM # SISEQDDLRWWKNNHGPGMPTDWPRIEEWVPPVKRMKRKKRDKKLQQDRPVMIGGVKVRALYDYVGEENDELSFRAGEVFLKVEEEDDQGWCRGVMDE # EREGFYPANYVELVQ] # end gene g182 ### # # ----- sequence number 176 (length = 11971, name = scaffold_14_6581619-6593589) ----- # # annotation: # Sequence scaffold_14_6581619-6593589 length=11971 scaffold_14_6581619-6593589 database start_codon 601 603 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 733 1162 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 1416 4046 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 4244 5068 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 5225 7982 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 8160 8391 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 8504 9756 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 9897 10527 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 10628 11018 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database intron 11138 11254 . + . transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 601 732 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 1163 1415 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 4047 4243 . + 2 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 5069 5224 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 7983 8159 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 8392 8503 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 9757 9896 . + 2 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 10528 10627 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 11019 11137 . + 2 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database CDS 11255 11371 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; scaffold_14_6581619-6593589 database stop_codon 11369 11371 . + 0 transcript_id "g_698-T1.1"; gene_id "g_698-T1"; # Predicted genes for sequence number 176 on both strands # start gene g183 scaffold_14_6581619-6593589 AUGUSTUS gene 1 11371 0.55 + . g183 scaffold_14_6581619-6593589 AUGUSTUS transcript 1 11371 0.55 + . g183.t1 scaffold_14_6581619-6593589 AUGUSTUS intron 1 636 0.56 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 733 1162 0.89 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 1416 4046 0.99 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 4244 5068 1 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 5225 7982 0.99 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 8160 8391 0.99 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 8504 9756 0.99 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 9897 10527 1 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 10628 11018 1 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS intron 11138 11254 1 + . transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 637 732 0.56 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 1163 1415 0.89 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 4047 4243 1 + 2 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 5069 5224 1 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 7983 8159 0.99 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 8392 8503 1 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 9757 9896 1 + 2 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 10528 10627 1 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 11019 11137 1 + 2 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS CDS 11255 11371 1 + 0 transcript_id "g183.t1"; gene_id "g183"; scaffold_14_6581619-6593589 AUGUSTUS stop_codon 11369 11371 . + 0 transcript_id "g183.t1"; gene_id "g183"; # protein sequence = [SHNLKPSDSMNLSVCQERISRSNGGREKTKRKCSHSGTMLQGCRFAWLGAVFLGLASTLAGASGFQHHRYEEMVRAMF # AVHSECPYITRIYSIGHSAEGRHLYVLEFSDNPGIHEALEPEFKYVGNMHGNEVLGRELLIQLSQFLCEEYRAGNHRITRLIHDTRIHILPSMNPDGY # EVAARQGPEFNGYLVGRGNSRDVDLNRNFPDLNALMYYYEKTNGRNHHLPLPDNWEQQVEPETLAVIKWMQNYNFVLSANLHGGAVVANYPFDKSRDP # RIRGRTTYSASPDDKVFKKLARTYSYAHSWMHKGWNCGDFFDEGITNGASWYSLSKGMQDFNYLYTNCFEITLELSCEKFPPASALSREWLGNREALV # SYLEQVHHGIKGMVYDDNNNPIGSAEISVAGINHDVTSGVDGDYFRLLLPGTYTVTANANGYLSSTSTVTVGPAEAIQLHFYLKTAPKDNNLNIKNNH # GKKNLSSPPKIPVNLGPR] # end gene g183 ### # # ----- sequence number 177 (length = 3202, name = scaffold_14_7017201-7020402) ----- # # annotation: # Sequence scaffold_14_7017201-7020402 length=3202 scaffold_14_7017201-7020402 database start_codon 601 603 . + 0 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 737 937 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 983 1089 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 1239 1329 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 1428 1646 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 1728 1858 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 1972 2080 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database intron 2197 2464 . + . transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 601 736 . + 0 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 938 982 . + 2 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 1090 1238 . + 2 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 1330 1427 . + 0 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 1647 1727 . + 1 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 1859 1971 . + 1 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 2081 2196 . + 2 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database CDS 2465 2602 . + 0 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; scaffold_14_7017201-7020402 database stop_codon 2600 2602 . + 0 transcript_id "g_705-T1.1"; gene_id "g_705-T1"; # Predicted genes for sequence number 177 on both strands # start gene g184 scaffold_14_7017201-7020402 AUGUSTUS gene 1 106 0.65 - . g184 scaffold_14_7017201-7020402 AUGUSTUS transcript 1 106 0.65 - . g184.t1 scaffold_14_7017201-7020402 AUGUSTUS CDS 1 106 0.65 - 0 transcript_id "g184.t1"; gene_id "g184"; scaffold_14_7017201-7020402 AUGUSTUS start_codon 104 106 . - 0 transcript_id "g184.t1"; gene_id "g184"; # protein sequence = [MPVPARYFSNIPMAFASSASLIPPPPINTHQPGVV] # end gene g184 ### # start gene g185 scaffold_14_7017201-7020402 AUGUSTUS gene 601 2602 0.26 + . g185 scaffold_14_7017201-7020402 AUGUSTUS transcript 601 2602 0.26 + . g185.t1 scaffold_14_7017201-7020402 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS intron 737 1089 0.27 + . transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS intron 1239 1329 1 + . transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS intron 1428 1646 0.99 + . transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS intron 1728 1858 1 + . transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS intron 1972 2080 1 + . transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS intron 2197 2464 1 + . transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 601 736 0.37 + 0 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 1090 1238 0.59 + 2 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 1330 1427 1 + 0 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 1647 1727 0.99 + 1 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 1859 1971 1 + 1 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 2081 2196 1 + 2 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS CDS 2465 2602 1 + 0 transcript_id "g185.t1"; gene_id "g185"; scaffold_14_7017201-7020402 AUGUSTUS stop_codon 2600 2602 . + 0 transcript_id "g185.t1"; gene_id "g185"; # protein sequence = [MLKNLLRLQSRLGCALSSRTVYPKLCEAKRPGFSVDCKTYSSAIAGGVFEINLDKRKLKTPGGKLFAVPNEALAIAVA # TEWDVQRDTLKFYTMHMTTLCNTAIDNPTQRNKEQMITAALKFLETDTVCFRVDEPPGLVELQKNEWDPVLNWTEDRHNVVIGSSTSILGPDIPDATK # ATFHQHLGSYNFWSLTGLEFVITQLKSVVLALGLIDRHLTVEQAVLLSRLEEEYQIQQWGSVEWAHDYDTHELRARTAAGALFVYLTTESSTIKRKLL # QD] # end gene g185 ### # # ----- sequence number 178 (length = 3254, name = scaffold_14_8279082-8282335) ----- # # annotation: # Sequence scaffold_14_8279082-8282335 length=3254 scaffold_14_8279082-8282335 database start_codon 601 603 . + 0 transcript_id "g_719-T1.1"; gene_id "g_719-T1"; scaffold_14_8279082-8282335 database intron 1067 1935 . + . transcript_id "g_719-T1.1"; gene_id "g_719-T1"; scaffold_14_8279082-8282335 database CDS 601 1066 . + 0 transcript_id "g_719-T1.1"; gene_id "g_719-T1"; scaffold_14_8279082-8282335 database CDS 1936 2654 . + 2 transcript_id "g_719-T1.1"; gene_id "g_719-T1"; scaffold_14_8279082-8282335 database stop_codon 2652 2654 . + 0 transcript_id "g_719-T1.1"; gene_id "g_719-T1"; # Predicted genes for sequence number 178 on both strands # start gene g186 scaffold_14_8279082-8282335 AUGUSTUS gene 601 2654 0.97 + . g186 scaffold_14_8279082-8282335 AUGUSTUS transcript 601 2654 0.97 + . g186.t1 scaffold_14_8279082-8282335 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g186.t1"; gene_id "g186"; scaffold_14_8279082-8282335 AUGUSTUS intron 1067 1935 1 + . transcript_id "g186.t1"; gene_id "g186"; scaffold_14_8279082-8282335 AUGUSTUS CDS 601 1066 0.97 + 0 transcript_id "g186.t1"; gene_id "g186"; scaffold_14_8279082-8282335 AUGUSTUS CDS 1936 2654 1 + 2 transcript_id "g186.t1"; gene_id "g186"; scaffold_14_8279082-8282335 AUGUSTUS stop_codon 2652 2654 . + 0 transcript_id "g186.t1"; gene_id "g186"; # protein sequence = [MNLGGKLSGLKGLVSQSQGKRRFKGDLTPDMISPPLADFRHTMHVGRGGDVFGDTSFLSNHGGTANGNGDTDSMTSPD # NKIGAFFSRTLRHVRKTPDRPRGDSKDLSPPPPLISPIIKNAISLPRLDVELSNGGSPTKTLFSSPAKTQDETTFSYGLESGFVTLPRLSRSERQQSS # GSTSCSPDIHCVSLTDTTDAIQSVSSTPKLTLNPDLIRSASLISLTSLTSLTSFTFDLGPSLMSEVFGLIDSPKVQLGPSHTWEGEELEHSFAYGGSE # MDSATISLVDSLLRDDCGSRKSPYGLEWTEEDEEAEASMKESMNSQLSPKDQMGSPAWERLGMESRGSQSVTDIQSPHHVGEPQQGQLPKMNAVGEIL # TNHLRMKPSSYSYTDEEEEIKV] # end gene g186 ### # # ----- sequence number 179 (length = 2206, name = scaffold_14_8593014-8595219) ----- # # annotation: # Sequence scaffold_14_8593014-8595219 length=2206 scaffold_14_8593014-8595219 database start_codon 601 603 . + 0 transcript_id "g_722-T1.1"; gene_id "g_722-T1"; scaffold_14_8593014-8595219 database intron 872 1076 . + . transcript_id "g_722-T1.1"; gene_id "g_722-T1"; scaffold_14_8593014-8595219 database CDS 601 871 . + 0 transcript_id "g_722-T1.1"; gene_id "g_722-T1"; scaffold_14_8593014-8595219 database CDS 1077 1606 . + 2 transcript_id "g_722-T1.1"; gene_id "g_722-T1"; scaffold_14_8593014-8595219 database stop_codon 1604 1606 . + 0 transcript_id "g_722-T1.1"; gene_id "g_722-T1"; # Predicted genes for sequence number 179 on both strands # start gene g187 scaffold_14_8593014-8595219 AUGUSTUS gene 334 1606 0.2 + . g187 scaffold_14_8593014-8595219 AUGUSTUS transcript 334 1606 0.2 + . g187.t1 scaffold_14_8593014-8595219 AUGUSTUS start_codon 334 336 . + 0 transcript_id "g187.t1"; gene_id "g187"; scaffold_14_8593014-8595219 AUGUSTUS intron 872 1076 0.94 + . transcript_id "g187.t1"; gene_id "g187"; scaffold_14_8593014-8595219 AUGUSTUS CDS 334 871 0.21 + 0 transcript_id "g187.t1"; gene_id "g187"; scaffold_14_8593014-8595219 AUGUSTUS CDS 1077 1606 0.99 + 2 transcript_id "g187.t1"; gene_id "g187"; scaffold_14_8593014-8595219 AUGUSTUS stop_codon 1604 1606 . + 0 transcript_id "g187.t1"; gene_id "g187"; # protein sequence = [MLSHSLEQIDASAGTCYIFLSAQWSAECPVTSPGGGVRYLLKYREFSEVETDASERTQNILQNYSNQLWLQLYNGQCA # YIGNSTNYLTAMIKKMSPTETDFDIPAKNCYRMVILGSTKVGKTAIVSRFLNGRFEEQYTPTIEDFHRKLYSIKGDVYQLDILDTSGNHPFPAMRRLS # ILTGDVFILVFSLDNRESFQEVQRLKRQIFETKSCLKNKTKENIDVPLVICGNKGDREFYREVQREEIEQLVAGDEQCAYFEISAKRNTNIDQMFQRL # FTMAKLPHEMSPDLHRKVSVQYCDMLHRKSLKNKKQKDNGDAYGIVAPFARRPSVHSDLLYIKEKAIGGGQGKDKERCVIS] # end gene g187 ### # # ----- sequence number 180 (length = 5818, name = scaffold_14_10404214-10410031) ----- # # annotation: # Sequence scaffold_14_10404214-10410031 length=5818 scaffold_14_10404214-10410031 database start_codon 601 603 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 678 863 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 1022 1190 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 1266 1384 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 1516 1598 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 1761 1903 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 1998 2140 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 2317 2421 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 2551 2677 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 2810 2900 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 2982 3105 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 3207 3340 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 3414 3508 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 3573 3654 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 3727 3861 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 4044 4214 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 4344 4427 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 4526 4738 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database intron 4824 5089 . + . transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 601 677 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 864 1021 . + 1 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 1191 1265 . + 2 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 1385 1515 . + 2 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 1599 1760 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 1904 1997 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 2141 2316 . + 2 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 2422 2550 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 2678 2809 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 2901 2981 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 3106 3206 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 3341 3413 . + 1 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 3509 3572 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 3655 3726 . + 2 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 3862 4043 . + 2 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 4215 4343 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 4428 4525 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 4739 4823 . + 1 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database CDS 5090 5218 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; scaffold_14_10404214-10410031 database stop_codon 5216 5218 . + 0 transcript_id "g_731-T1.1"; gene_id "g_731-T1"; # Predicted genes for sequence number 180 on both strands # start gene g188 scaffold_14_10404214-10410031 AUGUSTUS gene 30 5218 0.76 + . g188 scaffold_14_10404214-10410031 AUGUSTUS transcript 30 5218 0.76 + . g188.t1 scaffold_14_10404214-10410031 AUGUSTUS start_codon 30 32 . + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 39 226 0.9 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 432 553 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 678 863 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 1022 1190 0.86 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 1266 1384 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 1516 1598 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 1761 1903 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 1998 2140 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 2317 2421 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 2551 2677 0.99 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 2810 2900 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 2982 3105 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 3207 3340 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 3414 3508 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 3573 3654 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 3727 3861 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 4044 4214 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 4344 4427 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 4526 4738 1 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS intron 4824 5089 0.98 + . transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 30 38 0.9 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 227 431 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 554 677 1 + 2 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 864 1021 1 + 1 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 1191 1265 0.86 + 2 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 1385 1515 1 + 2 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 1599 1760 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 1904 1997 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 2141 2316 1 + 2 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 2422 2550 0.99 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 2678 2809 0.99 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 2901 2981 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 3106 3206 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 3341 3413 1 + 1 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 3509 3572 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 3655 3726 1 + 2 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 3862 4043 1 + 2 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 4215 4343 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 4428 4525 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 4739 4823 0.98 + 1 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS CDS 5090 5218 1 + 0 transcript_id "g188.t1"; gene_id "g188"; scaffold_14_10404214-10410031 AUGUSTUS stop_codon 5216 5218 . + 0 transcript_id "g188.t1"; gene_id "g188"; # protein sequence = [MGPPKSKKRKPSFRRLLKTSSIKLENKQKNRQFKQQNTEKKHRKEQKKLRQAIKDASLRTPQPLERYKKRPEEEEDEE # FVESLPVDMMDEDDLEQIREMAKKASFLTRDLSSCGPVHAKKRKSEQQPESYEKMPRKINVTEEKEVIHLLPLKNKTGLIPQSMEKPVVPKKEEEEEE # EEMDVETGLEQFENEEEGVTGPALTPQEQEKVRAQKLSERKLRIAGLGSAILSDPTNSIKKLKELRTMLLETDPYVAVTVRKLVMVSLMEVFKDITPS # YRIRPLTEAEKTTKVKKETQQLREFEEGLVSQYKFFLENLEQTVKDWQQRKRKRSDAVSLQSYKGLAEVAIRCICELLVAMAHFNFHNNIIVMVVPLM # NSPTRKVSDMCCEAVRELLKQDKVGQASLGTVKVISGLVKSRNYEVRPEVLRCLLSLRIKEVDLKKDTEDTAPKKKFMKYKEKKKHLSRMQRKWKKAE # EKLDKELLETEASESKEKKIKLHTETLNIVFLIYFRILKKAQKSVLLPSVLEGLAKFAHLINLEFFDDLLNVLQNLIQLGDLTYRESLHCIQTSFNIL # SGQGDVLNIDPLKFYTHLYKTLLKLHAGASNDDIRIVLDCLDVMLTKRRKQVTLQRAQAFVKRLSTLSLHVLPNAAVGILASNRSIIHTFPKCDVLLD # NEAQGSGVFLPELDEPEYCNPQSTALWELHTLKRHYHPVVRRFASHVALGAPSEGSGALPVQFSRRSPAELFDDYSVKDMTFNPPVDSPSSKKKEHLT # IGAALLDSQLKLQMDQVLAAETDPSCLDFSSAFSQTCS] # end gene g188 ### # # ----- sequence number 181 (length = 1839, name = scaffold_14_13600257-13602095) ----- # # annotation: # Sequence scaffold_14_13600257-13602095 length=1839 scaffold_14_13600257-13602095 database start_codon 601 603 . + 0 transcript_id "g_759-T1.1"; gene_id "g_759-T1"; scaffold_14_13600257-13602095 database intron 729 821 . + . transcript_id "g_759-T1.1"; gene_id "g_759-T1"; scaffold_14_13600257-13602095 database intron 976 1110 . + . transcript_id "g_759-T1.1"; gene_id "g_759-T1"; scaffold_14_13600257-13602095 database CDS 601 728 . + 0 transcript_id "g_759-T1.1"; gene_id "g_759-T1"; scaffold_14_13600257-13602095 database CDS 822 975 . + 1 transcript_id "g_759-T1.1"; gene_id "g_759-T1"; scaffold_14_13600257-13602095 database CDS 1111 1239 . + 0 transcript_id "g_759-T1.1"; gene_id "g_759-T1"; scaffold_14_13600257-13602095 database stop_codon 1237 1239 . + 0 transcript_id "g_759-T1.1"; gene_id "g_759-T1"; # Predicted genes for sequence number 181 on both strands # start gene g189 scaffold_14_13600257-13602095 AUGUSTUS gene 601 999 0.99 + . g189 scaffold_14_13600257-13602095 AUGUSTUS transcript 601 999 0.99 + . g189.t1 scaffold_14_13600257-13602095 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g189.t1"; gene_id "g189"; scaffold_14_13600257-13602095 AUGUSTUS intron 729 821 1 + . transcript_id "g189.t1"; gene_id "g189"; scaffold_14_13600257-13602095 AUGUSTUS CDS 601 728 0.99 + 0 transcript_id "g189.t1"; gene_id "g189"; scaffold_14_13600257-13602095 AUGUSTUS CDS 822 999 1 + 1 transcript_id "g189.t1"; gene_id "g189"; scaffold_14_13600257-13602095 AUGUSTUS stop_codon 997 999 . + 0 transcript_id "g189.t1"; gene_id "g189"; # protein sequence = [MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD # FKTDLRFQSAAIGALQASQILEN] # end gene g189 ### # # ----- sequence number 182 (length = 3259, name = scaffold_15_807294-810552) ----- # # annotation: # Sequence scaffold_15_807294-810552 length=3259 scaffold_15_807294-810552 database start_codon 601 603 . + 0 transcript_id "g_794-T1.1"; gene_id "g_794-T1"; scaffold_15_807294-810552 database intron 697 1939 . + . transcript_id "g_794-T1.1"; gene_id "g_794-T1"; scaffold_15_807294-810552 database CDS 601 696 . + 0 transcript_id "g_794-T1.1"; gene_id "g_794-T1"; scaffold_15_807294-810552 database CDS 1940 2659 . + 0 transcript_id "g_794-T1.1"; gene_id "g_794-T1"; scaffold_15_807294-810552 database stop_codon 2657 2659 . + 0 transcript_id "g_794-T1.1"; gene_id "g_794-T1"; # Predicted genes for sequence number 182 on both strands # start gene g190 scaffold_15_807294-810552 AUGUSTUS gene 601 2659 1 + . g190 scaffold_15_807294-810552 AUGUSTUS transcript 601 2659 1 + . g190.t1 scaffold_15_807294-810552 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g190.t1"; gene_id "g190"; scaffold_15_807294-810552 AUGUSTUS intron 697 1939 1 + . transcript_id "g190.t1"; gene_id "g190"; scaffold_15_807294-810552 AUGUSTUS CDS 601 696 1 + 0 transcript_id "g190.t1"; gene_id "g190"; scaffold_15_807294-810552 AUGUSTUS CDS 1940 2659 1 + 0 transcript_id "g190.t1"; gene_id "g190"; scaffold_15_807294-810552 AUGUSTUS stop_codon 2657 2659 . + 0 transcript_id "g190.t1"; gene_id "g190"; # protein sequence = [MGAQFSKTAAKGETVAEKPGEAAASPTKTNGQENGHVKVNGDASPAAAEAGKELQANGSATAEEVPKEEADKAEAAPA # EKEAVEGEKEAAEAALAAEGEAAAKPEEGATPSTSTETPKKKKKRFSFKKSFKLSGFSFKKTKKETGDGAEEGAAASGEEAKADAAEAPEAAASEEAK # PAEGEAAPAAATGEEAKEAASPVEAKAETAAEKPAEEAKAAPPAEEPKAEEKPAEPAAEAKAAEEAPKTEEAAPASQEAASSPEAPAAAAAEAAE] # end gene g190 ### # # ----- sequence number 183 (length = 1597, name = scaffold_15_2564017-2565613) ----- # # annotation: # Sequence scaffold_15_2564017-2565613 length=1597 scaffold_15_2564017-2565613 database start_codon 601 603 . + 0 transcript_id "g_800-T1.1"; gene_id "g_800-T1"; scaffold_15_2564017-2565613 database intron 714 795 . + . transcript_id "g_800-T1.1"; gene_id "g_800-T1"; scaffold_15_2564017-2565613 database CDS 601 713 . + 0 transcript_id "g_800-T1.1"; gene_id "g_800-T1"; scaffold_15_2564017-2565613 database CDS 796 997 . + 1 transcript_id "g_800-T1.1"; gene_id "g_800-T1"; scaffold_15_2564017-2565613 database stop_codon 995 997 . + 0 transcript_id "g_800-T1.1"; gene_id "g_800-T1"; # Predicted genes for sequence number 183 on both strands # start gene g191 scaffold_15_2564017-2565613 AUGUSTUS gene 1 997 0.89 + . g191 scaffold_15_2564017-2565613 AUGUSTUS transcript 1 997 0.89 + . g191.t1 scaffold_15_2564017-2565613 AUGUSTUS intron 714 795 1 + . transcript_id "g191.t1"; gene_id "g191"; scaffold_15_2564017-2565613 AUGUSTUS CDS 1 713 0.89 + 0 transcript_id "g191.t1"; gene_id "g191"; scaffold_15_2564017-2565613 AUGUSTUS CDS 796 997 1 + 1 transcript_id "g191.t1"; gene_id "g191"; scaffold_15_2564017-2565613 AUGUSTUS stop_codon 995 997 . + 0 transcript_id "g191.t1"; gene_id "g191"; # protein sequence = [VDIRGYVKDHLPNFRDMAWASSNYDTDDISLSEDRLMESTLKYTLFSSCFTRPCPPVSTRPCPPVSTRPCPPVLLLHQ # TLSSCLHQTLSPCPPASPDPVLLSPPDPVLLSPPDPVLLSPPDPVPLSPPDPVLLSPPDPVPLSSCLHQTLSSCLHQTLSPLLSCTVSLENRICCSMR # PDEGVCDVQLVSVFSRAFREYGDVMLLCNPQGNRSNQMVVLVDNDGRMDTLPPLSVEDDCERTYSLWFLLLGDVTPEHNHMLLYVNLFGRWTIFDAAA # NPAFKEADRSEVEELYFSCLAVYIMKEHQE] # end gene g191 ### # # ----- sequence number 184 (length = 4203, name = scaffold_15_7292138-7296340) ----- # # annotation: # Sequence scaffold_15_7292138-7296340 length=4203 scaffold_15_7292138-7296340 database start_codon 601 603 . + 0 transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database intron 646 1791 . + . transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database intron 2038 2234 . + . transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database intron 3190 3307 . + . transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database CDS 601 645 . + 0 transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database CDS 1792 2037 . + 0 transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database CDS 2235 3189 . + 0 transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database CDS 3308 3603 . + 2 transcript_id "g_826-T1.1"; gene_id "g_826-T1"; scaffold_15_7292138-7296340 database stop_codon 3601 3603 . + 0 transcript_id "g_826-T1.1"; gene_id "g_826-T1"; # Predicted genes for sequence number 184 on both strands # start gene g192 scaffold_15_7292138-7296340 AUGUSTUS gene 601 3603 0.37 + . g192 scaffold_15_7292138-7296340 AUGUSTUS transcript 601 3603 0.37 + . g192.t1 scaffold_15_7292138-7296340 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS intron 646 1791 0.39 + . transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS intron 2038 2234 1 + . transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS intron 3190 3307 0.99 + . transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS intron 3398 3508 0.9 + . transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS CDS 601 645 0.39 + 0 transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS CDS 1792 2037 0.9 + 0 transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS CDS 2235 3189 0.99 + 0 transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS CDS 3308 3397 0.9 + 2 transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS CDS 3509 3603 0.91 + 2 transcript_id "g192.t1"; gene_id "g192"; scaffold_15_7292138-7296340 AUGUSTUS stop_codon 3601 3603 . + 0 transcript_id "g192.t1"; gene_id "g192"; # protein sequence = [MLTFTSQSNPQQPFRADLADIRVVMMERNRDDSEQSSCSTFQYHDLEAAEALVSMSSWGQRSHKPRPLTPTSDSCDSL # LQHSEINDSPKDLIALSSLCMTPPHSPSFAETSTTTAVVTSTSTMAGSGSKPVLTQPRLCVGLSHLNDPHLGPQLITPPILEGSDSQCPAELTTALGG # RAMATSVIRHTADRSLSHNIPLGSYGQQTDTSTSPQPSVWPTAHVPEACLVQTKPQSYTGSCIADEKNEGPSSVDAAGPYTPTLASPSQCGSASSSPI # SSSPVLCQVFPVNGRTGMISAFVQAPVQMQTQGQNPILPQTSTSFPQPLLVGSQVTQGTVMFVVPQPPVSQAHSCPQTVVTLGNTKLLPLAPAPVYMS # SGQSNTASQADFSRRRNYVCNFPGCKKTYFKSSHLKAHLRTHTGEKPFSCHWEGCDKKFARSDELSRHRRTHTADVRDLNKMALSKGQLTSSNLPLSV # LVSASN] # end gene g192 ### # # ----- sequence number 185 (length = 4776, name = scaffold_15_10091266-10096041) ----- # # annotation: # Sequence scaffold_15_10091266-10096041 length=4776 scaffold_15_10091266-10096041 database start_codon 601 603 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 671 814 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 979 1071 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 1153 1248 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 1360 1501 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 1716 1842 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 1902 2006 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 2121 2943 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 3088 3703 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database intron 3878 3960 . + . transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 601 670 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 815 978 . + 2 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 1072 1152 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 1249 1359 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 1502 1715 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 1843 1901 . + 2 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 2007 2120 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 2944 3087 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 3704 3877 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database CDS 3961 4176 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; scaffold_15_10091266-10096041 database stop_codon 4174 4176 . + 0 transcript_id "g_847-T1.1"; gene_id "g_847-T1"; # Predicted genes for sequence number 185 on both strands # start gene g193 scaffold_15_10091266-10096041 AUGUSTUS gene 889 4176 0.32 + . g193 scaffold_15_10091266-10096041 AUGUSTUS transcript 889 4176 0.32 + . g193.t1 scaffold_15_10091266-10096041 AUGUSTUS start_codon 889 891 . + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 979 1248 0.78 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 1360 1501 1 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 1716 1842 0.99 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 1902 2006 0.99 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 2121 2943 0.65 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 3088 3703 0.93 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS intron 3878 3960 1 + . transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 889 978 0.65 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 1249 1359 1 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 1502 1715 1 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 1843 1901 0.99 + 2 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 2007 2120 1 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 2944 3087 0.76 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 3704 3877 1 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS CDS 3961 4176 1 + 0 transcript_id "g193.t1"; gene_id "g193"; scaffold_15_10091266-10096041 AUGUSTUS stop_codon 4174 4176 . + 0 transcript_id "g193.t1"; gene_id "g193"; # protein sequence = [MLRHLTSKIKATGPISVAEYMREALTNPVTLLGIWCLSEWMAAGKPSQFQVVEFGPGRGSLASDILRVFSQLRPALGG # ADVSVHLIEVSPRLSQIQAQCLTGEGSQAATSEDEPVYRHGTTTTGLPISWYRQLEDVPKGFSIYLAHEFFDALPIHKFQRTEKGWREVMVDIEPEES # DKLRFVVVPGPTLASSTLIQADEKRQHVEVCPEGGIVIQRLANRIAEDGGAALIADYGHDGTKTDTFRGFRGHQLHDVLVSPGSADLTADVDFSYLRR # MAGDTVACMGPVSQRNFLKNMGIDTRLQVLLRNCVDPAARAQLVQGYDLLTNPRKMGDRFQFFSLLNRSRLTRPEQPDVERKKPPAPLPVAGFSELSF # S] # end gene g193 ### # # ----- sequence number 186 (length = 2229, name = scaffold_15_14649200-14651428) ----- # # annotation: # Sequence scaffold_15_14649200-14651428 length=2229 scaffold_15_14649200-14651428 database start_codon 601 603 . + 0 transcript_id "g_878-T1.1"; gene_id "g_878-T1"; scaffold_15_14649200-14651428 database intron 844 1032 . + . transcript_id "g_878-T1.1"; gene_id "g_878-T1"; scaffold_15_14649200-14651428 database intron 1141 1338 . + . transcript_id "g_878-T1.1"; gene_id "g_878-T1"; scaffold_15_14649200-14651428 database CDS 601 843 . + 0 transcript_id "g_878-T1.1"; gene_id "g_878-T1"; scaffold_15_14649200-14651428 database CDS 1033 1140 . + 0 transcript_id "g_878-T1.1"; gene_id "g_878-T1"; scaffold_15_14649200-14651428 database CDS 1339 1629 . + 0 transcript_id "g_878-T1.1"; gene_id "g_878-T1"; scaffold_15_14649200-14651428 database stop_codon 1627 1629 . + 0 transcript_id "g_878-T1.1"; gene_id "g_878-T1"; # Predicted genes for sequence number 186 on both strands # start gene g194 scaffold_15_14649200-14651428 AUGUSTUS gene 601 1629 0.47 + . g194 scaffold_15_14649200-14651428 AUGUSTUS transcript 601 1629 0.47 + . g194.t1 scaffold_15_14649200-14651428 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g194.t1"; gene_id "g194"; scaffold_15_14649200-14651428 AUGUSTUS intron 844 1032 1 + . transcript_id "g194.t1"; gene_id "g194"; scaffold_15_14649200-14651428 AUGUSTUS intron 1141 1338 1 + . transcript_id "g194.t1"; gene_id "g194"; scaffold_15_14649200-14651428 AUGUSTUS CDS 601 843 0.48 + 0 transcript_id "g194.t1"; gene_id "g194"; scaffold_15_14649200-14651428 AUGUSTUS CDS 1033 1140 1 + 0 transcript_id "g194.t1"; gene_id "g194"; scaffold_15_14649200-14651428 AUGUSTUS CDS 1339 1629 0.98 + 0 transcript_id "g194.t1"; gene_id "g194"; scaffold_15_14649200-14651428 AUGUSTUS stop_codon 1627 1629 . + 0 transcript_id "g194.t1"; gene_id "g194"; # protein sequence = [MMLQHPGPSLSDISTSALVPCLSPPGTLTLDDFTSFTPLVKEELRFAIQTKRLSHGLSADMSDCASSSSDRPSEVSSG # KREVTPEESERRKRRRERNKVAAAKCRNKKKEKTDGLQKESEKLETVNAELKAQIEELKQQKQQLVYMLNLHRPTCIVRAQNGQTPEDERNLFIQHIK # DSSLQGLGIDPSDHLNEQVLLHSGHAHSMVPTTCGHL] # end gene g194 ### # # ----- sequence number 187 (length = 7003, name = scaffold_15_14659144-14666146) ----- # # annotation: # Sequence scaffold_15_14659144-14666146 length=7003 scaffold_15_14659144-14666146 database start_codon 601 603 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 658 758 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 792 906 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 981 1241 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 1327 2203 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 2267 3303 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 3414 3620 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 3677 3984 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 4098 5934 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database intron 6016 6244 . + . transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 601 657 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 759 791 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 907 980 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 1242 1326 . + 1 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 2204 2266 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 3304 3413 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 3621 3676 . + 1 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 3985 4097 . + 2 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 5935 6015 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database CDS 6245 6403 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; scaffold_15_14659144-14666146 database stop_codon 6401 6403 . + 0 transcript_id "g_879-T1.1"; gene_id "g_879-T1"; # Predicted genes for sequence number 187 on both strands # start gene g195 scaffold_15_14659144-14666146 AUGUSTUS gene 634 6403 0.19 + . g195 scaffold_15_14659144-14666146 AUGUSTUS transcript 634 6403 0.19 + . g195.t1 scaffold_15_14659144-14666146 AUGUSTUS start_codon 634 636 . + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 658 758 0.39 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 792 906 0.76 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 981 1241 1 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 1327 2203 0.82 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 2267 3303 0.81 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 3414 3635 0.62 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 3677 3984 0.98 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 4098 4209 0.66 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 4323 4682 0.66 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 4954 5934 0.91 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS intron 6016 6244 0.98 + . transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 634 657 0.49 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 759 791 0.76 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 907 980 1 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 1242 1326 1 + 1 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 2204 2266 0.81 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 3304 3413 0.98 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 3636 3676 0.62 + 1 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 3985 4097 0.94 + 2 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 4210 4322 0.66 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 4683 4953 0.69 + 1 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 5935 6015 0.97 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS CDS 6245 6403 0.99 + 0 transcript_id "g195.t1"; gene_id "g195"; scaffold_15_14659144-14666146 AUGUSTUS stop_codon 6401 6403 . + 0 transcript_id "g195.t1"; gene_id "g195"; # protein sequence = [MSAHEFAEDLDDVIKRTIEAGVQTLISVTEEASEFERVIQLSKRYPDLVAPCVGVHPIQGWGTTEQRNSTIQDLEPAL # PLFYTYRDYIVAVGEIGLDFTPWFCPTAQQREGQLSVFTRQLQIAKELDLPVSAAKVTIATLKEQGVSRALLHNFAGRPSVALEGVQAGFFFSFPPAV # GANTQMVNHNEGMGGVSTMPLFTYLLSLPPSLNIVLVLNDRPXVAGRFLRDWVRSSVTREDLGVEPLLLHVKRSQLRWFRHLFRMPPGRLPREVFQAC # PTGRWPRRRSRTRWRDYVSRLAWECPGIQPEELEERDTLIKQIPLEHICLETDSPALGFYKQMRNEPCNIRLSCDYIAHVKGLAPHTVQQATSHNALM # LFQKIRSHTHKEDESV] # end gene g195 ### # # ----- sequence number 188 (length = 3386, name = scaffold_15_15924837-15928222) ----- # # annotation: # Sequence scaffold_15_15924837-15928222 length=3386 scaffold_15_15924837-15928222 database start_codon 601 603 . + 0 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 642 1175 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 1294 1381 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 1462 1542 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 1611 1798 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 1844 1967 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 2072 2195 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 2263 2371 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database intron 2451 2641 . + . transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 601 641 . + 0 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 1176 1293 . + 1 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 1382 1461 . + 0 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 1543 1610 . + 1 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 1799 1843 . + 2 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 1968 2071 . + 2 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 2196 2262 . + 0 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 2372 2450 . + 2 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database CDS 2642 2786 . + 1 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; scaffold_15_15924837-15928222 database stop_codon 2784 2786 . + 0 transcript_id "g_891-T1.1"; gene_id "g_891-T1"; # Predicted genes for sequence number 188 on both strands # start gene g196 scaffold_15_15924837-15928222 AUGUSTUS gene 601 2786 0.55 + . g196 scaffold_15_15924837-15928222 AUGUSTUS transcript 601 2786 0.55 + . g196.t1 scaffold_15_15924837-15928222 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 642 1175 0.6 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 1294 1381 1 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 1462 1542 1 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 1611 1798 0.95 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 1844 1967 0.95 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 2072 2195 1 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 2263 2371 1 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS intron 2451 2641 1 + . transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 601 641 0.59 + 0 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 1176 1293 1 + 1 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 1382 1461 1 + 0 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 1543 1610 1 + 1 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 1799 1843 0.95 + 2 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 1968 2071 1 + 2 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 2196 2262 1 + 0 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 2372 2450 1 + 2 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS CDS 2642 2786 1 + 1 transcript_id "g196.t1"; gene_id "g196"; scaffold_15_15924837-15928222 AUGUSTUS stop_codon 2784 2786 . + 0 transcript_id "g196.t1"; gene_id "g196"; # protein sequence = [MSGKDRIDVFPSRMVQTIMKARLKGALTGRNLLKKKADALSMRFRQILRKIIETKTLMGEVMREAAFSLAEAKFAAGD # FSTTVIQNVNKAQVKVRAKKDNVAGVTLPVFEHYQEGGDSYELTGLARGGEQVSRLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVI # IPRIERTLTYIVTELDEREREEFYRLKKIQEKKKQLRERTEKEIAARLAALGPVAEPANMLMEETDEDLLFE] # end gene g196 ### # # ----- sequence number 189 (length = 2991, name = scaffold_16_115535-118525) ----- # # annotation: # Sequence scaffold_16_115535-118525 length=2991 scaffold_16_115535-118525 database start_codon 601 603 . + 0 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database intron 710 788 . + . transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database intron 849 1043 . + . transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database intron 1202 1469 . + . transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database intron 1590 1880 . + . transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database intron 2058 2283 . + . transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database CDS 601 709 . + 0 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database CDS 789 848 . + 2 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database CDS 1044 1201 . + 2 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database CDS 1470 1589 . + 0 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database CDS 1881 2057 . + 0 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database CDS 2284 2391 . + 0 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; scaffold_16_115535-118525 database stop_codon 2389 2391 . + 0 transcript_id "g_893-T1.1"; gene_id "g_893-T1"; # Predicted genes for sequence number 189 on both strands # start gene g197 scaffold_16_115535-118525 AUGUSTUS gene 14 2069 0.29 + . g197 scaffold_16_115535-118525 AUGUSTUS transcript 14 2069 0.29 + . g197.t1 scaffold_16_115535-118525 AUGUSTUS start_codon 14 16 . + 0 transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS intron 24 1043 0.36 + . transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS intron 1202 1469 1 + . transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS intron 1590 1880 0.99 + . transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS CDS 14 23 0.41 + 0 transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS CDS 1044 1201 0.75 + 2 transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS CDS 1470 1589 1 + 0 transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS CDS 1881 2069 0.84 + 0 transcript_id "g197.t1"; gene_id "g197"; scaffold_16_115535-118525 AUGUSTUS stop_codon 2067 2069 . + 0 transcript_id "g197.t1"; gene_id "g197"; # protein sequence = [MTPEGCTGVPFVDANMRELAMTGFMSNRGRQNVASFLTKDLGLDWRMGAEWFEHLLVDHDVCSNYGNWLYSAGIGNDP # RENRKFNMIKQGLDYDPYGDYVRLWVPELQGIKNRDVHTPWVLSSAILLAAHVSLNETYPQPIVIAPEWCRHISKNMVGA] # end gene g197 ### # # ----- sequence number 190 (length = 2750, name = scaffold_16_6198319-6201068) ----- # # annotation: # Sequence scaffold_16_6198319-6201068 length=2750 scaffold_16_6198319-6201068 database start_codon 601 603 . + 0 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database intron 796 891 . + . transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database intron 969 1085 . + . transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database intron 1156 1435 . + . transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database intron 1531 1969 . + . transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database CDS 601 795 . + 0 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database CDS 892 968 . + 0 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database CDS 1086 1155 . + 1 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database CDS 1436 1530 . + 0 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database CDS 1970 2150 . + 1 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; scaffold_16_6198319-6201068 database stop_codon 2148 2150 . + 0 transcript_id "g_926-T1.1"; gene_id "g_926-T1"; # Predicted genes for sequence number 190 on both strands # start gene g198 scaffold_16_6198319-6201068 AUGUSTUS gene 1 2150 0.27 + . g198 scaffold_16_6198319-6201068 AUGUSTUS transcript 1 2150 0.27 + . g198.t1 scaffold_16_6198319-6201068 AUGUSTUS intron 1 598 0.81 + . transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS intron 796 918 0.31 + . transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS intron 969 1085 0.65 + . transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS intron 1156 1435 0.94 + . transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS intron 1531 1969 1 + . transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS CDS 599 795 0.63 + 2 transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS CDS 919 968 0.31 + 0 transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS CDS 1086 1155 0.93 + 1 transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS CDS 1436 1530 1 + 0 transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS CDS 1970 2150 1 + 1 transcript_id "g198.t1"; gene_id "g198"; scaffold_16_6198319-6201068 AUGUSTUS stop_codon 2148 2150 . + 0 transcript_id "g198.t1"; gene_id "g198"; # protein sequence = [MGEVELSCRAYVKMYLHACLFPRCSVNGLLLSSSPAGGAVCVTDCVPLLHSHLPLAPITQLALTQQRIVGYYQANACV # SDISPTPCALKIADKIAEQCNNAVLLMIDGGKMSPDYRVPPIVMYERKDTRWTLKDKHTIMLRQWEETRSIASQLMDSGDHELLVDFDSHLDDITKDW # TNQKLNNKILELASPANGNV] # end gene g198 ### # # ----- sequence number 191 (length = 3678, name = scaffold_16_7098195-7101872) ----- # # annotation: # Sequence scaffold_16_7098195-7101872 length=3678 scaffold_16_7098195-7101872 database start_codon 601 603 . + 0 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database intron 671 810 . + . transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database intron 931 1095 . + . transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database intron 1195 1428 . + . transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database intron 1507 1734 . + . transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database intron 1870 2117 . + . transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database intron 2224 2906 . + . transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 601 670 . + 0 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 811 930 . + 2 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 1096 1194 . + 2 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 1429 1506 . + 2 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 1735 1869 . + 2 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 2118 2223 . + 2 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database CDS 2907 3078 . + 1 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; scaffold_16_7098195-7101872 database stop_codon 3076 3078 . + 0 transcript_id "g_928-T1.1"; gene_id "g_928-T1"; # Predicted genes for sequence number 191 on both strands # start gene g199 scaffold_16_7098195-7101872 AUGUSTUS gene 1 3078 0.72 + . g199 scaffold_16_7098195-7101872 AUGUSTUS transcript 1 3078 0.72 + . g199.t1 scaffold_16_7098195-7101872 AUGUSTUS intron 87 567 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS intron 671 810 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS intron 931 1095 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS intron 1195 1428 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS intron 1507 1734 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS intron 1870 2117 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS intron 2224 2906 1 + . transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 1 86 1 + 2 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 568 670 1 + 0 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 811 930 1 + 2 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 1096 1194 1 + 2 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 1429 1506 1 + 2 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 1735 1869 1 + 2 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 2118 2223 1 + 2 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS CDS 2907 3078 0.72 + 1 transcript_id "g199.t1"; gene_id "g199"; scaffold_16_7098195-7101872 AUGUSTUS stop_codon 3076 3078 . + 0 transcript_id "g199.t1"; gene_id "g199"; # protein sequence = [GTELLIQSEIDSVINDWYRALTDTISTHAWESDEAIEEDMPESPGAEKQDKEKDHRDSKKNRAMKTSVSMDASDQKKT # RVKLKKFLTRRPTYQAVRDKGYIKDQVFGCSLSSLCLRENTSVPNFVKMCIDHVEDTGLSIDGLYRVSGNLAVIQKLRFAVNHDEKVSLEDSKWEDIH # VTTGALKMFFRELPEPLFTYSSFNDFVEAIKCSDHKLRVNSIKDLIKQLPKPNHDTMQVLFKHLRRVIEHGESNRMTTQSVAIVFGPTLLRPETETGN # MAVHMVYQNQIVELILLEYEGIFR] # end gene g199 ### # # ----- sequence number 192 (length = 3431, name = scaffold_16_7533569-7536999) ----- # # annotation: # Sequence scaffold_16_7533569-7536999 length=3431 scaffold_16_7533569-7536999 database start_codon 601 603 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 731 929 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 1020 1215 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 1294 1708 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 1786 1874 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 1977 2116 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 2228 2336 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database intron 2451 2681 . + . transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 601 730 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 930 1019 . + 2 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 1216 1293 . + 2 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 1709 1785 . + 2 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 1875 1976 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 2117 2227 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 2337 2450 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database CDS 2682 2831 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; scaffold_16_7533569-7536999 database stop_codon 2829 2831 . + 0 transcript_id "g_932-T1.1"; gene_id "g_932-T1"; # Predicted genes for sequence number 192 on both strands # start gene g200 scaffold_16_7533569-7536999 AUGUSTUS gene 1 2831 0.57 + . g200 scaffold_16_7533569-7536999 AUGUSTUS transcript 1 2831 0.57 + . g200.t1 scaffold_16_7533569-7536999 AUGUSTUS intron 1 68 0.98 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 141 545 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 731 929 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 1020 1215 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 1294 1708 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 1786 1874 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 1977 2116 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 2228 2336 1 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS intron 2451 2609 0.57 + . transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 69 140 0.98 + 1 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 546 730 1 + 1 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 930 1019 1 + 2 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 1216 1293 1 + 2 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 1709 1785 1 + 2 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 1875 1976 1 + 0 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 2117 2227 1 + 0 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 2337 2450 0.98 + 0 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS CDS 2610 2831 0.58 + 0 transcript_id "g200.t1"; gene_id "g200"; scaffold_16_7533569-7536999 AUGUSTUS stop_codon 2829 2831 . + 0 transcript_id "g200.t1"; gene_id "g200"; # protein sequence = [YMQSFLELLGYENKKPEDPSALNDFLELLIEIRNRHNDVVPTMAQGVVEYKDKFGFDPFISSSIQYFLDRFYTNRISF # RMLINQHTLLFGNDTNPAHPKHIGSIDPTCNVAEVVKDAYETAKMLCEQYYLAAPQLKIEEFHMKHPGQSIQAVYVPSHLFHMLFELFKNSMRATVEL # HENSKEGLPPVKAKVTLGKEDLSVKISDRGGGVPLRKIDRLFNYMYSTAPTPSLEPSSAVPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIY # LKIPWPTSGQIWVFIGGLITPAFSPQALSSESFERLPVFNKSAWRHYQTSPEADDWSNPSREPRDASKSNYKAKR] # end gene g200 ### # # ----- sequence number 193 (length = 6466, name = scaffold_16_9140172-9146637) ----- # # annotation: # Sequence scaffold_16_9140172-9146637 length=6466 scaffold_16_9140172-9146637 database start_codon 601 603 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 1030 1188 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 1297 1837 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 2063 2512 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 2625 2716 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 2741 2852 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 2897 2985 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 3220 3318 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 3460 3616 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 3854 3955 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 4070 4215 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 4444 4535 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 4677 4826 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 5064 5442 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database intron 5548 5784 . + . transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 601 1029 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 1189 1296 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 1838 2062 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 2513 2624 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 2717 2740 . + 2 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 2853 2896 . + 2 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 2986 3219 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 3319 3459 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 3617 3853 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 3956 4069 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 4216 4443 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 4536 4676 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 4827 5063 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 5443 5547 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database CDS 5785 5880 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; scaffold_16_9140172-9146637 database stop_codon 5878 5880 . + 0 transcript_id "g_945-T1.1"; gene_id "g_945-T1"; # Predicted genes for sequence number 193 on both strands # start gene g201 scaffold_16_9140172-9146637 AUGUSTUS gene 1 5880 0.08 + . g201 scaffold_16_9140172-9146637 AUGUSTUS transcript 1 5880 0.08 + . g201.t1 scaffold_16_9140172-9146637 AUGUSTUS intron 1 759 0.49 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 1030 1188 0.99 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 1297 1837 1 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 2063 2512 1 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 2625 2852 0.73 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 2897 2985 1 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 3220 3318 1 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 3460 3616 0.99 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 3854 3955 0.86 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 4070 4215 1 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 4444 4535 0.43 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 4677 4826 0.62 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 5064 5442 0.98 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS intron 5548 5784 0.96 + . transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 760 1029 0.56 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 1189 1296 1 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 1838 2062 1 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 2513 2624 1 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 2853 2896 1 + 2 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 2986 3219 1 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 3319 3459 1 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 3617 3853 0.86 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 3956 4069 1 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 4216 4443 0.99 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 4536 4676 0.44 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 4827 5063 0.86 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 5443 5547 0.96 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS CDS 5785 5880 0.89 + 0 transcript_id "g201.t1"; gene_id "g201"; scaffold_16_9140172-9146637 AUGUSTUS stop_codon 5878 5880 . + 0 transcript_id "g201.t1"; gene_id "g201"; # protein sequence = [CSRESTLQPATKVTKGTGGEEHGSPAKNDTQLCSKTDLDLHNNASVIRKDSPSTQQSVCPHVLSDKLDVGTDCADGDN # SGPSSENKKSTKGRRHQKKCDPARTYNNIIEEKQEEIKNLKEDMESLKRSTQVTVEDCEKFFTELVERKTSELKDRIQAQEKAMLREAEGHLHTLEAE # LEELRRAEAEHKPLAHIDAQPHFFQKIPSMSFAFGMVQRRVYRLQKQLEKSFDKKLENFFLKALSSLADRVVEEHELEDYKDIESVRTKEMLAQMKNV # LYQLTPERFPQLMKVVATFPITTEERLRAIVDLIYEHAVSDPDDSETYAQMCKCLQLRKVPSSDRPGETLNFRKLMLNRCLVDFERTHAECFNEFIEK # IDAATEKEQCHLLSKKLEEVFSELLDKSVGNIKLICEFFKLNMMTEAQMHEFLTKLVRRKDAISIACLSTMLSAIGKDLDHGKAKSRMDHYYKHVEII # LNEKNSSVPDEHILFELHQLLNDRQDAEPEVVKSQEMFAKMEYILIHVNKENFQKVMKEVDTFPIKTEDELKGIIHLIYQKAISDPDNSEVYANLCRS # QMARKVPCSDNRAKTLNFRKLLLNRCQTDFEKDRTEGLRDKQTELKAAVDIKDRRRLQEEIRVMKWEAKDEAVGNAKLISELYKLKMVTEAIVHDCIV # RELKRKDDVSLSCVYAILSTAGPALDNDKSKPRMDQYYKEIEKIIKDRKVSPDVCNELKELMDIRQGKVWRDGDQKLPGPKSMPGCDEGATATDEEK] # end gene g201 ### # # ----- sequence number 194 (length = 5006, name = scaffold_16_9146638-9151643) ----- # # annotation: # Sequence scaffold_16_9146638-9151643 length=5006 scaffold_16_9146638-9151643 database start_codon 586 588 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database intron 754 2769 . + . transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database intron 2911 3085 . + . transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database intron 3204 3303 . + . transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database intron 3447 3548 . + . transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database intron 3705 3828 . + . transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database intron 4010 4182 . + . transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 586 753 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 2770 2910 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 3086 3203 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 3304 3446 . + 2 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 3549 3704 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 3829 4009 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database CDS 4183 4406 . + 2 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; scaffold_16_9146638-9151643 database stop_codon 4404 4406 . + 0 transcript_id "g_946-T1.1"; gene_id "g_946-T1"; # Predicted genes for sequence number 194 on both strands # start gene g202 scaffold_16_9146638-9151643 AUGUSTUS gene 1 4406 0.47 + . g202 scaffold_16_9146638-9151643 AUGUSTUS transcript 1 4406 0.47 + . g202.t1 scaffold_16_9146638-9151643 AUGUSTUS intron 1 573 0.48 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 754 1962 0.99 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 2071 2769 0.99 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 2911 3085 1 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 3204 3303 1 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 3447 3548 1 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 3705 3828 1 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS intron 4010 4182 1 + . transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 574 753 0.48 + 0 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 1963 2070 0.99 + 0 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 2770 2910 1 + 0 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 3086 3203 1 + 0 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 3304 3446 1 + 2 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 3549 3704 1 + 0 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 3829 4009 1 + 0 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS CDS 4183 4406 1 + 2 transcript_id "g202.t1"; gene_id "g202"; scaffold_16_9146638-9151643 AUGUSTUS stop_codon 4404 4406 . + 0 transcript_id "g202.t1"; gene_id "g202"; # protein sequence = [QTIVMASPLSEANANFSLALFQKIAEENKGNIFFSPLSISSALAMVLLGARGNTATQMSEVLCFNKAKRAKHAAGPEQ # MMQQQVQKAQLPQALVKVSLHLHKTKDDVHAAFSKLMAELNKKEAPYALSLANRLYGEQTYQFVKEFLGDTRKHYNAELETVDFLKGSEAARLNINGW # VAKQTQDKIQNLLPEGVVDPDTRLVLVNAIYFKGSWEKMFKATSTKDTQFKLNQNESKPVKMMYQKTKFPLTFIPEGNCQILELPYVGKDLSMLIMLP # NEITGLKKLEKNLSYENFLDWTRPDMMDMQEVQVGLPRFKLEQTLDLGDTLASMGMKDAFNASLADFSGMSPGNDLVLSKVIHKAFVEVNEEGTEAAA # ATAAVMMLRCAMMPSSFIADHPFLFFIRHNPTNSVLFYGRYCSP] # end gene g202 ### # # ----- sequence number 195 (length = 4570, name = scaffold_16_11317239-11321808) ----- # # annotation: # Sequence scaffold_16_11317239-11321808 length=4570 scaffold_16_11317239-11321808 database start_codon 601 603 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 738 1053 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 1289 1535 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 1665 2118 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 2185 2386 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 2473 2700 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 2813 3518 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database intron 3668 3879 . + . transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 601 737 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 1054 1288 . + 1 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 1536 1664 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 2119 2184 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 2387 2472 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 2701 2812 . + 1 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 3519 3667 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database CDS 3880 3970 . + 1 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; scaffold_16_11317239-11321808 database stop_codon 3968 3970 . + 0 transcript_id "g_955-T1.1"; gene_id "g_955-T1"; # Predicted genes for sequence number 195 on both strands # start gene g203 scaffold_16_11317239-11321808 AUGUSTUS gene 601 3970 0.59 + . g203 scaffold_16_11317239-11321808 AUGUSTUS transcript 601 3970 0.59 + . g203.t1 scaffold_16_11317239-11321808 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS intron 738 1053 0.94 + . transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS intron 1289 1535 1 + . transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS intron 1665 2118 1 + . transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS intron 2185 3518 0.85 + . transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS intron 3668 3879 0.98 + . transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS CDS 601 737 0.72 + 0 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS CDS 1054 1288 0.96 + 1 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS CDS 1536 1664 1 + 0 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS CDS 2119 2184 1 + 0 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS CDS 3519 3667 1 + 0 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS CDS 3880 3970 0.98 + 1 transcript_id "g203.t1"; gene_id "g203"; scaffold_16_11317239-11321808 AUGUSTUS stop_codon 3968 3970 . + 0 transcript_id "g203.t1"; gene_id "g203"; # protein sequence = [MAGSSIAQKTWELANSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGL # MLGKVDGETMNIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISA # GKVNLGAFRTYPKNSDYTTGQVFDLSEKLEQSEAQLGRGSFMLGLDTHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINTSAN] # end gene g203 ### # # ----- sequence number 196 (length = 2696, name = scaffold_16_11662334-11665029) ----- # # annotation: # Sequence scaffold_16_11662334-11665029 length=2696 scaffold_16_11662334-11665029 database start_codon 601 603 . + 0 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database intron 676 900 . + . transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database intron 1073 1414 . + . transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database intron 1533 1660 . + . transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database intron 1831 1944 . + . transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database CDS 601 675 . + 0 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database CDS 901 1072 . + 0 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database CDS 1415 1532 . + 2 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database CDS 1661 1830 . + 1 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database CDS 1945 2096 . + 2 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; scaffold_16_11662334-11665029 database stop_codon 2094 2096 . + 0 transcript_id "g_956-T1.1"; gene_id "g_956-T1"; # Predicted genes for sequence number 196 on both strands # start gene g204 scaffold_16_11662334-11665029 AUGUSTUS gene 1 2096 0.75 + . g204 scaffold_16_11662334-11665029 AUGUSTUS transcript 1 2096 0.75 + . g204.t1 scaffold_16_11662334-11665029 AUGUSTUS intron 177 538 1 + . transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS intron 676 900 1 + . transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS intron 1073 1414 1 + . transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS intron 1533 1660 1 + . transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS intron 1831 1944 0.98 + . transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS CDS 1 176 0.87 + 1 transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS CDS 539 675 1 + 2 transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS CDS 901 1072 1 + 0 transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS CDS 1415 1532 1 + 2 transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS CDS 1661 1830 1 + 1 transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS CDS 1945 2096 0.84 + 2 transcript_id "g204.t1"; gene_id "g204"; scaffold_16_11662334-11665029 AUGUSTUS stop_codon 2094 2096 . + 0 transcript_id "g204.t1"; gene_id "g204"; # protein sequence = [LSPQYPDQTLVPDHRNIVWNSRQGFIVRRPSFIFVGLFSCQATVDGVTHTSKYLAIRLVNKITAVYLNASRPVQALQG # EMLSLNCTVTAELNSRVSIIWTYPGQANSSASITRRIEKRRSHTLFYSVLSIPTLKRSDRGLYTCHVTSGPQSRQANVSVTVYDRPFIRLKPRHGVVL # ETPAGQKSYRLSPKLRAFPGPEVIWLKDGMVAAEHCSRYHVDGSSLVIRDVAEEDSGKYTMLVGIREHGLFQNLTLSLVVNVSPQIGEKAVLGQDPGT # VQRGSRQALHCTSHAVPPPQVQWLWYPCPSKGL] # end gene g204 ### # # ----- sequence number 197 (length = 2201, name = scaffold_17_5130067-5132267) ----- # # annotation: # Sequence scaffold_17_5130067-5132267 length=2201 scaffold_17_5130067-5132267 database start_codon 601 603 . + 0 transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; scaffold_17_5130067-5132267 database intron 789 914 . + . transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; scaffold_17_5130067-5132267 database intron 1090 1199 . + . transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; scaffold_17_5130067-5132267 database CDS 601 788 . + 0 transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; scaffold_17_5130067-5132267 database CDS 915 1089 . + 1 transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; scaffold_17_5130067-5132267 database CDS 1200 1601 . + 0 transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; scaffold_17_5130067-5132267 database stop_codon 1599 1601 . + 0 transcript_id "g_1066-T1.1"; gene_id "g_1066-T1"; # Predicted genes for sequence number 197 on both strands # start gene g205 scaffold_17_5130067-5132267 AUGUSTUS gene 922 1601 0.95 + . g205 scaffold_17_5130067-5132267 AUGUSTUS transcript 922 1601 0.95 + . g205.t1 scaffold_17_5130067-5132267 AUGUSTUS start_codon 922 924 . + 0 transcript_id "g205.t1"; gene_id "g205"; scaffold_17_5130067-5132267 AUGUSTUS intron 1090 1199 0.99 + . transcript_id "g205.t1"; gene_id "g205"; scaffold_17_5130067-5132267 AUGUSTUS CDS 922 1089 0.95 + 0 transcript_id "g205.t1"; gene_id "g205"; scaffold_17_5130067-5132267 AUGUSTUS CDS 1200 1601 0.99 + 0 transcript_id "g205.t1"; gene_id "g205"; scaffold_17_5130067-5132267 AUGUSTUS stop_codon 1599 1601 . + 0 transcript_id "g205.t1"; gene_id "g205"; # protein sequence = [MKELESLGKELYGAKLILQRFQIRNCKHFKNPVPASECLLSMLEESNPHHYFVATQDRSVTEGLKKIPGVPLLYIILN # TIVLDKPSQASLNHVQAMQLGELVTPAQQQSIRSLKEEGGIGQDGERRGKKRKRKVSNPNPLSCLKKKKKQLPTQPLNKRKTEEEKKKRSRSRRRKSA # GGEGFSVNSASNP] # end gene g205 ### # # ----- sequence number 198 (length = 4015, name = scaffold_17_7466603-7470617) ----- # # annotation: # Sequence scaffold_17_7466603-7470617 length=4015 scaffold_17_7466603-7470617 database start_codon 601 603 . + 0 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 642 1543 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 1661 1878 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 1972 2171 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 2305 2583 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 2712 2838 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 2925 3138 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database intron 3184 3284 . + . transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 601 641 . + 0 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 1544 1660 . + 1 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 1879 1971 . + 1 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 2172 2304 . + 1 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 2584 2711 . + 0 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 2839 2924 . + 1 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 3139 3183 . + 2 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database CDS 3285 3415 . + 2 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; scaffold_17_7466603-7470617 database stop_codon 3413 3415 . + 0 transcript_id "g_1019-T1.1"; gene_id "g_1019-T1"; # Predicted genes for sequence number 198 on both strands # start gene g206 scaffold_17_7466603-7470617 AUGUSTUS gene 1563 3415 0.71 + . g206 scaffold_17_7466603-7470617 AUGUSTUS transcript 1563 3415 0.71 + . g206.t1 scaffold_17_7466603-7470617 AUGUSTUS start_codon 1563 1565 . + 0 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS intron 1661 1878 0.96 + . transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS intron 1972 2171 0.96 + . transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS intron 2305 2583 0.99 + . transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS intron 2712 2838 1 + . transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS intron 2925 3138 0.97 + . transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS intron 3184 3284 0.97 + . transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 1563 1660 0.78 + 0 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 1879 1971 0.96 + 1 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 2172 2304 1 + 1 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 2584 2711 0.99 + 0 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 2839 2924 1 + 1 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 3139 3183 0.97 + 2 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS CDS 3285 3415 1 + 2 transcript_id "g206.t1"; gene_id "g206"; scaffold_17_7466603-7470617 AUGUSTUS stop_codon 3413 3415 . + 0 transcript_id "g206.t1"; gene_id "g206"; # protein sequence = [MLAAQADRVMALGEWEERWQEDKIGFHQPNIHPMLQSNVEKVLAGRKEVRFFFPLCGKALDMKWLSDLGHSVVGVEIA # EKAIKQFFEENNMTYSEEEVPVIPGAKLYKSSEGNISLYQCDLFNFSSSVAGQFGGIWDRGSLVAINPGDREKYAALIMSLMAKDCKYLLDTLIYNPE # LYKGPPFMVPDEQVQSLFGASCDVELLQSVDALTDRQRGWGLDYLAEKLHLISPKTNSGGI] # end gene g206 ### # # ----- sequence number 199 (length = 1789, name = scaffold_17_9526882-9528670) ----- # # annotation: # Sequence scaffold_17_9526882-9528670 length=1789 scaffold_17_9526882-9528670 database start_codon 601 603 . + 0 transcript_id "g_1036-T1.1"; gene_id "g_1036-T1"; scaffold_17_9526882-9528670 database intron 839 944 . + . transcript_id "g_1036-T1.1"; gene_id "g_1036-T1"; scaffold_17_9526882-9528670 database CDS 601 838 . + 0 transcript_id "g_1036-T1.1"; gene_id "g_1036-T1"; scaffold_17_9526882-9528670 database CDS 945 1189 . + 2 transcript_id "g_1036-T1.1"; gene_id "g_1036-T1"; scaffold_17_9526882-9528670 database stop_codon 1187 1189 . + 0 transcript_id "g_1036-T1.1"; gene_id "g_1036-T1"; # Predicted genes for sequence number 199 on both strands # start gene g207 scaffold_17_9526882-9528670 AUGUSTUS gene 1 545 0.32 + . g207 scaffold_17_9526882-9528670 AUGUSTUS transcript 1 545 0.32 + . g207.t1 scaffold_17_9526882-9528670 AUGUSTUS intron 1 260 0.35 + . transcript_id "g207.t1"; gene_id "g207"; scaffold_17_9526882-9528670 AUGUSTUS CDS 261 545 0.32 + 0 transcript_id "g207.t1"; gene_id "g207"; scaffold_17_9526882-9528670 AUGUSTUS stop_codon 543 545 . + 0 transcript_id "g207.t1"; gene_id "g207"; # protein sequence = [VLSNILNEGCWLNIGCVPVVSCQASCSFSLLSSSYYPLPFNSACRKDVPRSQGSSEQGPKPPSGRSNNSQLSASDRLL # FFTYNPSKLAQLLPKA] # end gene g207 ### # start gene g208 scaffold_17_9526882-9528670 AUGUSTUS gene 601 1189 0.4 + . g208 scaffold_17_9526882-9528670 AUGUSTUS transcript 601 1189 0.4 + . g208.t1 scaffold_17_9526882-9528670 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g208.t1"; gene_id "g208"; scaffold_17_9526882-9528670 AUGUSTUS intron 839 944 1 + . transcript_id "g208.t1"; gene_id "g208"; scaffold_17_9526882-9528670 AUGUSTUS CDS 601 838 0.41 + 0 transcript_id "g208.t1"; gene_id "g208"; scaffold_17_9526882-9528670 AUGUSTUS CDS 945 1189 0.99 + 2 transcript_id "g208.t1"; gene_id "g208"; scaffold_17_9526882-9528670 AUGUSTUS stop_codon 1187 1189 . + 0 transcript_id "g208.t1"; gene_id "g208"; # protein sequence = [MLGALLRRNMSQKLSMLLLLFGLAWGLMLLRYTVQQPQHQSSAELRQQILELSRRYVKVLTEENQNAAGGPQGTSMAG # YADLKRTIAVLLDDILTRLVKLEGKVDLVANSSATNTSHPAGGALSSAPAALHKATKQETPDSHLETPQLPAHTPNRAHQGV] # end gene g208 ### # # ----- sequence number 200 (length = 3433, name = scaffold_17_10054513-10057945) ----- # # annotation: # Sequence scaffold_17_10054513-10057945 length=3433 scaffold_17_10054513-10057945 database start_codon 601 603 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 712 959 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 1090 1207 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 1302 1411 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 1578 1698 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 1822 1938 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 2060 2163 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 2247 2355 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 2418 2548 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database intron 2653 2783 . + . transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 601 711 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 960 1089 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 1208 1301 . + 2 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 1412 1577 . + 1 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 1699 1821 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 1939 2059 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 2164 2246 . + 2 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 2356 2417 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 2549 2652 . + 1 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database CDS 2784 2833 . + 2 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; scaffold_17_10054513-10057945 database stop_codon 2831 2833 . + 0 transcript_id "g_1043-T1.1"; gene_id "g_1043-T1"; # Predicted genes for sequence number 200 on both strands # start gene g209 scaffold_17_10054513-10057945 AUGUSTUS gene 601 2833 0.38 + . g209 scaffold_17_10054513-10057945 AUGUSTUS transcript 601 2833 0.38 + . g209.t1 scaffold_17_10054513-10057945 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 712 959 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 1090 1207 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 1302 1411 0.76 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 1578 1698 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 1822 1938 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 2060 2163 0.95 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 2247 2355 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 2418 2548 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS intron 2653 2783 1 + . transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 601 711 0.5 + 0 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 960 1089 1 + 0 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 1208 1301 1 + 2 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 1412 1577 0.76 + 1 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 1699 1821 1 + 0 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 1939 2059 0.95 + 0 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 2164 2246 1 + 2 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 2356 2417 1 + 0 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 2549 2652 1 + 1 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS CDS 2784 2833 1 + 2 transcript_id "g209.t1"; gene_id "g209"; scaffold_17_10054513-10057945 AUGUSTUS stop_codon 2831 2833 . + 0 transcript_id "g209.t1"; gene_id "g209"; # protein sequence = [MIEPKKRPGDMALVPTEVKRPRTDLVAAAQSQQLVAMGPPRSSSLQAPIMLMCGHEGEVYCCKFHPNGATLASSGYDR # LILMWNVYGDCDNFATLKGHTGAVMELHYNTDGSMLFSASTDKTVGVWDSETGERIKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKGA # VHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKVWDLRQNKLIYSMHGHGDSLTGLSLSSEGSYLLSNSMDNTVRIWDVRPFAPKERCVKIFQGNIHNF # EKNLLRCSWSNDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYMGEIQ] # end gene g209 ### # # ----- sequence number 201 (length = 2765, name = scaffold_17_11509700-11512464) ----- # # annotation: # Sequence scaffold_17_11509700-11512464 length=2765 scaffold_17_11509700-11512464 database start_codon 601 603 . + 0 transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database intron 707 871 . + . transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database intron 988 1124 . + . transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database intron 1269 1427 . + . transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database CDS 601 706 . + 0 transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database CDS 872 987 . + 2 transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database CDS 1125 1268 . + 0 transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database CDS 1428 2165 . + 0 transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; scaffold_17_11509700-11512464 database stop_codon 2163 2165 . + 0 transcript_id "g_1047-T1.1"; gene_id "g_1047-T1"; # Predicted genes for sequence number 201 on both strands # start gene g210 scaffold_17_11509700-11512464 AUGUSTUS gene 601 2165 0.94 + . g210 scaffold_17_11509700-11512464 AUGUSTUS transcript 601 2165 0.94 + . g210.t1 scaffold_17_11509700-11512464 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS intron 707 871 1 + . transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS intron 988 1124 0.98 + . transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS intron 1269 1427 0.98 + . transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS CDS 601 706 0.98 + 0 transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS CDS 872 987 1 + 2 transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS CDS 1125 1268 0.97 + 0 transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS CDS 1428 2165 0.99 + 0 transcript_id "g210.t1"; gene_id "g210"; scaffold_17_11509700-11512464 AUGUSTUS stop_codon 2163 2165 . + 0 transcript_id "g210.t1"; gene_id "g210"; # protein sequence = [MELDMLKIEQVVVGEDVSSTETIKPDPVITPSLQPYQHDSLQCFQCFITFCNSKAKERHMRKSHREEYKQQLQQTDTL # FTCYVCDRTFPSSEELTQHQASHSQEDKPFRCPYCQGSFRTFSELTVHRRNLCTERNSVCRECHMVFRGPAHLRTHRLSQHPQPLEEPDDDAMTHRCG # KCGRGFKTEEELVQHQEDFAGDQHCNAKPQAKRRGRPPKKVVEAVPAEGEVSGEEKSVEAEEGAALEEGGKESPAKGGKRKGRPPKQPQAEELKIPCP # ELGCTLTFPSLSLFRAHKKEKHAKPPPPRKAYPCTECEESYARSEQLKAHMARAHGSGRHNCPTCGKSFGRESNLKAHQKTHTEEEETDKGKR] # end gene g210 ### # # ----- sequence number 202 (length = 6552, name = scaffold_17_13867739-13874290) ----- # # annotation: # Sequence scaffold_17_13867739-13874290 length=6552 scaffold_17_13867739-13874290 database start_codon 601 603 . + 0 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 640 760 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 879 1051 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 1151 1438 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 2033 2153 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 2334 2647 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 3503 3847 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 4454 4563 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 4786 5250 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database intron 5423 5861 . + . transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 601 639 . + 0 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 761 878 . + 0 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 1052 1150 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 1439 2032 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 2154 2333 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 2648 3502 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 3848 4453 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 4564 4785 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 5251 5422 . + 2 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database CDS 5862 5952 . + 1 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; scaffold_17_13867739-13874290 database stop_codon 5950 5952 . + 0 transcript_id "g_1059-T1.1"; gene_id "g_1059-T1"; # Predicted genes for sequence number 202 on both strands # start gene g211 scaffold_17_13867739-13874290 AUGUSTUS gene 1 5952 0.64 + . g211 scaffold_17_13867739-13874290 AUGUSTUS transcript 1 5952 0.64 + . g211.t1 scaffold_17_13867739-13874290 AUGUSTUS intron 109 189 1 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 352 540 1 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 640 760 0.97 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 879 1051 1 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 1151 1438 0.93 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 2033 2153 1 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 2334 2647 0.76 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 3503 3847 0.97 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 4454 4563 0.96 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 4786 5250 1 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS intron 5423 5861 1 + . transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 1 108 1 + 0 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 190 351 1 + 0 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 541 639 0.97 + 0 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 761 878 1 + 0 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 1052 1150 1 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 1439 2032 0.93 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 2154 2333 1 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 2648 3502 0.76 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 3848 4453 0.97 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 4564 4785 0.96 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 5251 5422 1 + 2 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS CDS 5862 5952 1 + 1 transcript_id "g211.t1"; gene_id "g211"; scaffold_17_13867739-13874290 AUGUSTUS stop_codon 5950 5952 . + 0 transcript_id "g211.t1"; gene_id "g211"; # protein sequence = [APLSSTPVASAAGSGGGKMKRERTSTRPSSKRPDDEIVDAPDLPAIPLPISTSGLRAFSFSSLLPTTATPTATPTATP # MTPVAADLVNNKDSPAACSPPCAPFTFSSPIVMATAASPTSFSPSAGFTFSAPVAKTTPSVSNGNMDMPSHPVHLSEDVRLKAKVEYNSQQVEEFEGP # FKPAKVLKQGSVLDLLKSPGFSSPVLERSPSPEPAPPGPPAVSTAPSGFGDMFKAPAGSWTCSVCLVQNKPSHTKCIACQSPQVNTSSSSSSSSSSKT # TPASGLQSAVTTATAAPMGFKGLFTTAAGTWECDTCLVQNKPDVVKCVACETAKPGAGVKPSPTLPAFSGAKAPSNTSSGFAGFGDKFKKPEGVWECG # ICLVQNKEQSRTCVACMGAKPGASASPPLPAAATPLLSFGDKFKKPEGSWECDVCLVQNKAADLQCVACQSTKPGAQLKPKAFGSSSFGVSSDSGSGG # FKFGSSSESTSGAGFQFGGTLTDSSTSNASAGGFKFGASASETSSSGGFKFGGTLSDMSANNGGFKFGEGSSSAAVASDDKKAEPPSTGGFTFGVSGG # SASGNCSEENSEPSGGGGFSFGLSKPESTFGFPAASQDRKENGSPSADITSTTTTATSAPLFGSVPAAEPRLTSAPLGDATFGAVPSADKELPAPSFT # FGKPEETETSGFAFSGKEVESSPAPSIGFSFSKPDPPQEATQPSFTFGKPADKSEAVGDGPKAAFSFGQSTTDTAASNPKPVFGFTASTSAPSTTTPA # PSIFGASITSAPSSTTPAPSLFGASITSAPSSTTPAPSLFGASITSASTTPAPSIFGASITSAPSSTTPAPSIFGASITSAPSSTTPAPSIFGASINS # APAPSSFLFGQASASDAPPAKAFMFGQSQDSQGSQVAPPSLNAAPAQPFLFGSAASAPPAAPPSFTFGAAAPPAASTPATAPSSGPSPFVFSPASSAV # FGSTQSPAFGQVSSQPSAPAFGAPAPSSFLGAPSSQSPAFGAASVFGSAASSAPGGGFQFGGASAFGSASSTGVFAFGGGPGGSSAPSSAPAPQPPPG # GGFTFAQPPAFNIGSTKNNFTPTPAGQNTIAGRKIKTAVRRRK] # end gene g211 ### # # ----- sequence number 203 (length = 7038, name = scaffold_18_818377-825414) ----- # # annotation: # Sequence scaffold_18_818377-825414 length=7038 scaffold_18_818377-825414 database start_codon 601 603 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 683 2380 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 2510 2749 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 2847 3006 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 3074 3179 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 3255 3415 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 3473 3620 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 3746 3867 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 4076 4202 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 4350 4446 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 4552 4671 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 4802 4902 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 4966 5085 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 5151 5390 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 5571 5780 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database intron 5798 6431 . + . transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 601 682 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 2381 2509 . + 2 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 2750 2846 . + 2 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 3007 3073 . + 1 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 3180 3254 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 3416 3472 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 3621 3745 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 3868 4075 . + 1 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 4203 4349 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 4447 4551 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 4672 4801 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 4903 4965 . + 2 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 5086 5150 . + 2 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 5391 5570 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 5781 5797 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database CDS 6432 6438 . + 1 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; scaffold_18_818377-825414 database stop_codon 6436 6438 . + 0 transcript_id "g_1075-T1.1"; gene_id "g_1075-T1"; # Predicted genes for sequence number 203 on both strands # start gene g212 scaffold_18_818377-825414 AUGUSTUS gene 1575 5801 0.07 + . g212 scaffold_18_818377-825414 AUGUSTUS transcript 1575 5801 0.07 + . g212.t1 scaffold_18_818377-825414 AUGUSTUS start_codon 1575 1577 . + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 1643 1986 0.36 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 2058 2380 0.65 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 2510 2749 0.94 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 2847 3030 0.62 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 3074 3179 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 3255 3415 0.99 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 3473 3620 0.99 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 3746 3867 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 4076 4202 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 4350 4446 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 4552 4671 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 4802 4902 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 4966 5085 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 5151 5390 1 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS intron 5571 5780 0.52 + . transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 1575 1642 0.44 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 1987 2057 0.46 + 1 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 2381 2509 1 + 2 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 2750 2846 0.94 + 2 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 3031 3073 0.62 + 1 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 3180 3254 1 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 3416 3472 0.99 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 3621 3745 1 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 3868 4075 1 + 1 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 4203 4349 1 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 4447 4551 1 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 4672 4801 1 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 4903 4965 1 + 2 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 5086 5150 1 + 2 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 5391 5570 1 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS CDS 5781 5801 0.45 + 0 transcript_id "g212.t1"; gene_id "g212"; scaffold_18_818377-825414 AUGUSTUS stop_codon 5799 5801 . + 0 transcript_id "g212.t1"; gene_id "g212"; # protein sequence = [MKRAPGRQEGGLDREKETGLYGDAVLHGWEVGHMVSDAELICALSQAGGGPHLANPPTVIVMVGLPARGKTYMSKKLT # RYLNWIGMPTKVFNVGEYRREAVKNYSSYDFFKSDNENAVKIRQDVKSYLTEEGGQVAVFDATNTTRDRRDMILDFGSEHCFKVFFIESVCDDPSVIA # SNIMEVKVSCPDYQDCNKTDAMLDFQKRIECYKAHYEPLDPDEYDRDLSFIKVIDVGRRFLVNRIQDHIQSKIVYYLMNIHVQPRAIYLCRHGESMHN # LQGRLGGDSGLSSRGKKFAAALSGFVEEQNLKNLKVWTSQMCRSIETAEDLRVPYEQWKALNELDAGVCEEMTYEEIKEKYPDEFALRDQDKFYYRYP # TGESYQDLVQRVEPVIMELERQENVLVICHQAVMRCLLAYFLDKSADEMPYLKCPLHTVLKLTPMAYGCKVESISLNVDAVNTHRDRPEEVKKGPGTL # IRRNSVTPLTSPEPNIKKPRIDELDEPPLHELPTSLSLCSPAHIPLALAGQHWKVCL] # end gene g212 ### # # ----- sequence number 204 (length = 3315, name = scaffold_18_3701507-3704821) ----- # # annotation: # Sequence scaffold_18_3701507-3704821 length=3315 scaffold_18_3701507-3704821 database start_codon 601 603 . + 0 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database intron 740 1064 . + . transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database intron 1295 1642 . + . transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database intron 1716 1823 . + . transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database intron 1915 2078 . + . transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database intron 2189 2335 . + . transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database CDS 601 739 . + 0 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database CDS 1065 1294 . + 2 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database CDS 1643 1715 . + 0 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database CDS 1824 1914 . + 2 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database CDS 2079 2188 . + 1 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database CDS 2336 2715 . + 2 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; scaffold_18_3701507-3704821 database stop_codon 2713 2715 . + 0 transcript_id "g_1091-T1.1"; gene_id "g_1091-T1"; # Predicted genes for sequence number 204 on both strands # start gene g213 scaffold_18_3701507-3704821 AUGUSTUS gene 676 2715 0.92 + . g213 scaffold_18_3701507-3704821 AUGUSTUS transcript 676 2715 0.92 + . g213.t1 scaffold_18_3701507-3704821 AUGUSTUS start_codon 676 678 . + 0 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS intron 740 1064 0.92 + . transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS intron 1295 1642 1 + . transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS intron 1716 1823 1 + . transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS intron 1915 2078 1 + . transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS intron 2189 2335 1 + . transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS CDS 676 739 0.94 + 0 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS CDS 1065 1294 0.96 + 2 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS CDS 1643 1715 1 + 0 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS CDS 1824 1914 1 + 2 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS CDS 2079 2188 1 + 1 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS CDS 2336 2715 1 + 2 transcript_id "g213.t1"; gene_id "g213"; scaffold_18_3701507-3704821 AUGUSTUS stop_codon 2713 2715 . + 0 transcript_id "g213.t1"; gene_id "g213"; # protein sequence = [MFGVGTTGSKDKAFDPRYNRKAGPGPGPGAVRGQPVSMKSPPASKAQTLENMQQMKMMMEQEMKSDKYKPNSNKGYVF # TLMPLYAIGVGLFAAYKFLKIKSADYTNVQKSKVAKGAKKSEETESQLTELEQRLAQTEKMLNSILTQLDPLTNCVKSVAQEQKKEIMSQLQTIRHLM # KKRGMDCPPLNIEEPSCERNLDDLIESLAAHETLPEEDTSETKPQGGAEEEGAWESTHLPPPSVQETEETHTGAEEQNQLENVEREKEEVAAEEDDEN # IGDKELMPSLECSSGANVEDLGLVQNFAEEPSGLRRRNRPE] # end gene g213 ### # # ----- sequence number 205 (length = 4683, name = scaffold_18_3784699-3789381) ----- # # annotation: # Sequence scaffold_18_3784699-3789381 length=4683 scaffold_18_3784699-3789381 database start_codon 601 603 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 671 997 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 1036 1217 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 1300 1392 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 1493 1692 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 1825 1928 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 2002 2150 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 2247 2574 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 2740 2885 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 2974 3066 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 3270 3425 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database intron 3523 3925 . + . transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 601 670 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 998 1035 . + 2 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 1218 1299 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 1393 1492 . + 2 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 1693 1824 . + 1 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 1929 2001 . + 1 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 2151 2246 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 2575 2739 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 2886 2973 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 3067 3269 . + 2 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 3426 3522 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database CDS 3926 4083 . + 2 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; scaffold_18_3784699-3789381 database stop_codon 4081 4083 . + 0 transcript_id "g_1093-T1.1"; gene_id "g_1093-T1"; # Predicted genes for sequence number 205 on both strands # start gene g214 scaffold_18_3784699-3789381 AUGUSTUS gene 601 4083 0.59 + . g214 scaffold_18_3784699-3789381 AUGUSTUS transcript 601 4083 0.59 + . g214.t1 scaffold_18_3784699-3789381 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 671 997 0.99 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 1036 1217 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 1300 1392 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 1493 1692 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 1825 1928 0.97 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 2002 2150 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 2247 2574 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 2740 2885 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 2974 3066 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 3270 3425 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS intron 3523 3925 1 + . transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 601 670 0.61 + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 998 1035 1 + 2 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 1218 1299 1 + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 1393 1492 1 + 2 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 1693 1824 1 + 1 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 1929 2001 0.97 + 1 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 2151 2246 1 + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 2575 2739 1 + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 2886 2973 1 + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 3067 3269 1 + 2 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 3426 3522 1 + 0 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS CDS 3926 4083 1 + 2 transcript_id "g214.t1"; gene_id "g214"; scaffold_18_3784699-3789381 AUGUSTUS stop_codon 4081 4083 . + 0 transcript_id "g214.t1"; gene_id "g214"; # protein sequence = [MPDYLGGDQRKVKEEEKEDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALW # DLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD # VGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF # DEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL # LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN] # end gene g214 ### # # ----- sequence number 206 (length = 1643, name = scaffold_18_5126280-5127922) ----- # # annotation: # Sequence scaffold_18_5126280-5127922 length=1643 scaffold_18_5126280-5127922 database start_codon 601 603 . + 0 transcript_id "g_1159-T1.1"; gene_id "g_1159-T1"; scaffold_18_5126280-5127922 database intron 816 937 . + . transcript_id "g_1159-T1.1"; gene_id "g_1159-T1"; scaffold_18_5126280-5127922 database CDS 601 815 . + 0 transcript_id "g_1159-T1.1"; gene_id "g_1159-T1"; scaffold_18_5126280-5127922 database CDS 938 1043 . + 1 transcript_id "g_1159-T1.1"; gene_id "g_1159-T1"; scaffold_18_5126280-5127922 database stop_codon 1041 1043 . + 0 transcript_id "g_1159-T1.1"; gene_id "g_1159-T1"; # Predicted genes for sequence number 206 on both strands # start gene g215 scaffold_18_5126280-5127922 AUGUSTUS gene 601 1043 0.91 + . g215 scaffold_18_5126280-5127922 AUGUSTUS transcript 601 1043 0.91 + . g215.t1 scaffold_18_5126280-5127922 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g215.t1"; gene_id "g215"; scaffold_18_5126280-5127922 AUGUSTUS intron 816 937 0.98 + . transcript_id "g215.t1"; gene_id "g215"; scaffold_18_5126280-5127922 AUGUSTUS CDS 601 815 0.91 + 0 transcript_id "g215.t1"; gene_id "g215"; scaffold_18_5126280-5127922 AUGUSTUS CDS 938 1043 1 + 1 transcript_id "g215.t1"; gene_id "g215"; scaffold_18_5126280-5127922 AUGUSTUS stop_codon 1041 1043 . + 0 transcript_id "g215.t1"; gene_id "g215"; # protein sequence = [MANMSSYAVRMARLSARIFGDVVRSTDSSSMKVVQLFKEQPMAQRKEVYDWYPQHKIYYALTQKLRFMGLFRDEHEDF # KEEMRRLKKLRGKGKPKKGEGKRATKKK] # end gene g215 ### # # ----- sequence number 207 (length = 3697, name = scaffold_18_11470168-11473864) ----- # # annotation: # Sequence scaffold_18_11470168-11473864 length=3697 scaffold_18_11470168-11473864 database start_codon 601 603 . + 0 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database intron 670 1236 . + . transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database intron 1358 1457 . + . transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database intron 1534 1800 . + . transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database intron 1874 2212 . + . transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database intron 2341 2550 . + . transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database intron 2703 2780 . + . transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 601 669 . + 0 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 1237 1357 . + 0 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 1458 1533 . + 2 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 1801 1873 . + 1 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 2213 2340 . + 0 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 2551 2702 . + 1 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database CDS 2781 3097 . + 2 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; scaffold_18_11470168-11473864 database stop_codon 3095 3097 . + 0 transcript_id "g_1143-T1.1"; gene_id "g_1143-T1"; # Predicted genes for sequence number 207 on both strands # start gene g216 scaffold_18_11470168-11473864 AUGUSTUS gene 550 3097 0.44 + . g216 scaffold_18_11470168-11473864 AUGUSTUS transcript 550 3097 0.44 + . g216.t1 scaffold_18_11470168-11473864 AUGUSTUS start_codon 550 552 . + 0 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS intron 670 1236 1 + . transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS intron 1358 1457 0.98 + . transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS intron 1534 1800 0.98 + . transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS intron 1874 2212 1 + . transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS intron 2341 2550 1 + . transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS intron 2703 2780 1 + . transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 550 669 0.44 + 0 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 1237 1357 1 + 0 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 1458 1533 0.98 + 2 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 1801 1873 0.98 + 1 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 2213 2340 1 + 0 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 2551 2702 1 + 1 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS CDS 2781 3097 1 + 2 transcript_id "g216.t1"; gene_id "g216"; scaffold_18_11470168-11473864 AUGUSTUS stop_codon 3095 3097 . + 0 transcript_id "g216.t1"; gene_id "g216"; # protein sequence = [MFAIRTPEEECSSEVEEMDTSEPNWCWFYLAECGVWHMFEIDPSAACSVTSDQIEHQYSRNQHGVMEFYTAKYTYRLD # FSVMKQINVTTGKQRPIKRSLHSATGFRFICDNLALPVPCHWERINTDEPYQLIHLSRDTYEFREVARLYERTMGHPIKTIQRIQNLDLWEFFCRKKV # QLRKVKRTQDIEERMLFHGTGHSNVPAICTYNFDWRLTGSHGDVYGKGSYFARDAKYSSKFCLTTGKHNFALQKHGLAPPIFASEPPFKTMFLARVLV # GEHTLGQPQYCRPPSKDASYTNFFDSCVDDVANPKIYVIFDSNQIYPEYLIEFY] # end gene g216 ### # # ----- sequence number 208 (length = 4301, name = scaffold_19_6209615-6213915) ----- # # annotation: # Sequence scaffold_19_6209615-6213915 length=4301 scaffold_19_6209615-6213915 database start_codon 601 603 . + 0 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 680 981 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 1255 1403 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 1665 1880 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 1983 2885 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 2907 3026 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 3048 3203 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 3231 3310 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database intron 3404 3681 . + . transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 601 679 . + 0 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 982 1254 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 1404 1664 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 1881 1982 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 2886 2906 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 3027 3047 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 3204 3230 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 3311 3403 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database CDS 3682 3701 . + 2 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; scaffold_19_6209615-6213915 database stop_codon 3699 3701 . + 0 transcript_id "g_1181-T1.1"; gene_id "g_1181-T1"; # Predicted genes for sequence number 208 on both strands # (none) # # ----- sequence number 209 (length = 4895, name = scaffold_19_8752214-8757108) ----- # # annotation: # Sequence scaffold_19_8752214-8757108 length=4895 scaffold_19_8752214-8757108 database start_codon 601 603 . + 0 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 619 704 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 871 1001 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 1148 1539 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 1658 2087 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 3129 3256 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 3415 3530 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database intron 3649 3909 . + . transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 601 618 . + 0 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 705 870 . + 0 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 1002 1147 . + 2 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 1540 1657 . + 0 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 2088 3128 . + 2 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 3257 3414 . + 2 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 3531 3648 . + 0 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database CDS 3910 4295 . + 2 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; scaffold_19_8752214-8757108 database stop_codon 4293 4295 . + 0 transcript_id "g_1199-T1.1"; gene_id "g_1199-T1"; # Predicted genes for sequence number 209 on both strands # start gene g217 scaffold_19_8752214-8757108 AUGUSTUS gene 1 4295 0.46 + . g217 scaffold_19_8752214-8757108 AUGUSTUS transcript 1 4295 0.46 + . g217.t1 scaffold_19_8752214-8757108 AUGUSTUS intron 1 704 0.56 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS intron 871 1001 1 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS intron 1148 1539 0.91 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS intron 1658 2087 0.98 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS intron 3129 3256 0.93 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS intron 3415 3530 1 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS intron 3649 3909 0.99 + . transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 705 870 0.56 + 0 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 1002 1147 1 + 2 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 1540 1657 0.91 + 0 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 2088 3128 0.98 + 2 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 3257 3414 0.93 + 2 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 3531 3648 1 + 0 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS CDS 3910 4295 0.99 + 2 transcript_id "g217.t1"; gene_id "g217"; scaffold_19_8752214-8757108 AUGUSTUS stop_codon 4293 4295 . + 0 transcript_id "g217.t1"; gene_id "g217"; # protein sequence = [ILGTTVPDTADMVEEGHVMVMKEEEEEEDEDEDGVGVTEQEVKDEEQNEVEPEKEDIQDSTVQKKRNWVPYIYTLKGK # ETHRFLGYDITIYESLDHYGGVIWPGALALCEYLETNREQINLVDKYVLELGAGTGLVSIVAALLGAWVTATDLPEILSNLKYNLMKNTRGCCRYTPQ # VAELTWGDDLEGIYPKSIHRYDYVVASDVVYHHEYLDGLLATMKHFCQPGTKLIWANKVRLPSDLKFAENFKKAFHTTLVSEVEDVKIFMGTAREEGS # EFHLLGGVQETEEQEAEVADDERSISKDEEKEQSEEEKNQEAKIRDKGKAKEEYHLEPSYVKDGERDHEGLVRKDQENKVVYYKEEREEKQGFEEDGT # ENRTEDAAEEEVSSRGNDVVMKRKADKEEPPQRKQEVWKILEEEDEEDEEDEEDEVDEEDEKDEKDEDEVDEEDEEDEGSRQPAEEQRWDHDDEGYQD # DERESTESQCSTVATDEDINEVPVDTKETSIQVPPWAQCPVLKFGKDVYTYAGQEIGIYEARLDHYGALMWPAALALCYYLDTHSEEFNMMDKTVLEL # GAGTGLVSIVASLLGAYVTATDISEIMHNMTSNLMRNTSGRSRHPPKAAELFWGQDLEVPFPKSVCRYDYVLAADVVYHHKFLKELLATMKYFCQPGT # KLIWANKMRLPTDLDFTEDFQNTFNTTLLADLGGVKLMLATSRE] # end gene g217 ### # # ----- sequence number 210 (length = 3384, name = scaffold_19_8849658-8853041) ----- # # annotation: # Sequence scaffold_19_8849658-8853041 length=3384 scaffold_19_8849658-8853041 database start_codon 601 603 . + 0 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database intron 776 912 . + . transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database intron 1082 1218 . + . transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database intron 1350 2162 . + . transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database intron 2246 2448 . + . transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database intron 2546 2704 . + . transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database CDS 601 775 . + 0 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database CDS 913 1081 . + 2 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database CDS 1219 1349 . + 1 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database CDS 2163 2245 . + 2 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database CDS 2449 2545 . + 0 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database CDS 2705 2784 . + 2 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; scaffold_19_8849658-8853041 database stop_codon 2782 2784 . + 0 transcript_id "g_1201-T1.1"; gene_id "g_1201-T1"; # Predicted genes for sequence number 210 on both strands # start gene g218 scaffold_19_8849658-8853041 AUGUSTUS gene 1 3281 0.27 + . g218 scaffold_19_8849658-8853041 AUGUSTUS transcript 1 3281 0.27 + . g218.t1 scaffold_19_8849658-8853041 AUGUSTUS intron 1 558 0.61 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS intron 800 912 1 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS intron 1082 1218 1 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS intron 1350 2162 0.9 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS intron 2246 2448 0.97 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS intron 2546 2704 0.97 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS intron 2771 3081 0.51 + . transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 559 799 0.85 + 0 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 913 1081 1 + 2 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 1219 1349 0.94 + 1 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 2163 2245 0.93 + 2 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 2449 2545 1 + 0 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 2705 2770 0.56 + 2 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS CDS 3082 3281 0.54 + 2 transcript_id "g218.t1"; gene_id "g218"; scaffold_19_8849658-8853041 AUGUSTUS stop_codon 3279 3281 . + 0 transcript_id "g218.t1"; gene_id "g218"; # protein sequence = [HKLKSSQKDKVRQFMSFTQAGERTAVYCLTQNDWKLEVATDNYFQNPDLYYKESMKTSVDRKKLEQLYNRYKGKDLAV # CFYPQDENKIGIDGIQQFCDDLTLDPASMSVLVVAWKFRAATQCEFSRKEFLDGMAELGCDSPEKLKALLPRLEQELKDTGKFKDFYQFTFNFAKNPG # QKGLDLEMAVAYWNLVLMGRFKFLDLWNRFLLEHHKRSIPKDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEFARPIVAGGKRWLDGVPPPPPP # PRPGVPYEQFNHPALKAAPCLRPTSSMSLPHHHHHHHSPDHPQRQIRSFPAQTD] # end gene g218 ### # # ----- sequence number 211 (length = 3113, name = scaffold_19_9460838-9463950) ----- # # annotation: # Sequence scaffold_19_9460838-9463950 length=3113 scaffold_19_9460838-9463950 database start_codon 601 603 . + 0 transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database intron 604 906 . + . transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database intron 1130 1254 . + . transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database intron 1404 1532 . + . transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database CDS 601 603 . + 0 transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database CDS 907 1129 . + 0 transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database CDS 1255 1403 . + 2 transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database CDS 1533 2513 . + 0 transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; scaffold_19_9460838-9463950 database stop_codon 2511 2513 . + 0 transcript_id "g_1208-T1.1"; gene_id "g_1208-T1"; # Predicted genes for sequence number 211 on both strands # start gene g219 scaffold_19_9460838-9463950 AUGUSTUS gene 601 2513 0.87 + . g219 scaffold_19_9460838-9463950 AUGUSTUS transcript 601 2513 0.87 + . g219.t1 scaffold_19_9460838-9463950 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS intron 604 906 0.88 + . transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS intron 1130 1254 1 + . transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS intron 1404 1532 0.99 + . transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS CDS 601 603 0.9 + 0 transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS CDS 907 1129 0.89 + 0 transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS CDS 1255 1403 0.99 + 2 transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS CDS 1533 2513 1 + 0 transcript_id "g219.t1"; gene_id "g219"; scaffold_19_9460838-9463950 AUGUSTUS stop_codon 2511 2513 . + 0 transcript_id "g219.t1"; gene_id "g219"; # protein sequence = [MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEV # RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQ # VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAP # VISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ # RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSVGDEGEEEGEEY] # end gene g219 ### # # ----- sequence number 212 (length = 5803, name = scaffold_19_9528873-9534675) ----- # # annotation: # Sequence scaffold_19_9528873-9534675 length=5803 scaffold_19_9528873-9534675 database start_codon 601 603 . + 0 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database intron 631 2437 . + . transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database intron 2595 2678 . + . transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database intron 2810 3108 . + . transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database intron 3197 3637 . + . transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database intron 3763 4626 . + . transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database intron 4694 5099 . + . transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 601 630 . + 0 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 2438 2594 . + 0 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 2679 2809 . + 2 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 3109 3196 . + 0 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 3638 3762 . + 2 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 4627 4693 . + 0 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database CDS 5100 5203 . + 2 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; scaffold_19_9528873-9534675 database stop_codon 5201 5203 . + 0 transcript_id "g_1210-T1.1"; gene_id "g_1210-T1"; # Predicted genes for sequence number 212 on both strands # start gene g220 scaffold_19_9528873-9534675 AUGUSTUS gene 1942 5203 0.28 + . g220 scaffold_19_9528873-9534675 AUGUSTUS transcript 1942 5203 0.28 + . g220.t1 scaffold_19_9528873-9534675 AUGUSTUS start_codon 1942 1944 . + 0 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS intron 2062 2437 0.6 + . transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS intron 2595 2678 1 + . transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS intron 2810 3108 1 + . transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS intron 3197 3637 1 + . transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS intron 3763 4626 0.63 + . transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS intron 4694 5099 1 + . transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 1942 2061 0.46 + 0 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 2438 2594 1 + 0 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 2679 2809 1 + 2 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 3109 3196 1 + 0 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 3638 3762 0.63 + 2 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 4627 4693 1 + 0 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS CDS 5100 5203 1 + 2 transcript_id "g220.t1"; gene_id "g220"; scaffold_19_9528873-9534675 AUGUSTUS stop_codon 5201 5203 . + 0 transcript_id "g220.t1"; gene_id "g220"; # protein sequence = [MFHKLFHSQGLSSPHCVKAWKRRVIVLFEMPVKGSASFRQLHNEDDLSEASTSAQPSTSAQISVTPEPAPQAGDAEAP # PPPYASIALGATAAESSFQGDFPVPPPYSVATSLPTYDEAEKAKAASLAASAVEVIPRDDDFPPRDDFSDADQLRVGNDGIFMLAFFMAFLFNWIGFC # LSFCLTNTIAGRYGAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLILGLLLFFRGFVNYLKVRNMSESMATSHRTRFFFLY] # end gene g220 ### # # ----- sequence number 213 (length = 2293, name = scaffold_19_11248886-11251178) ----- # # annotation: # Sequence scaffold_19_11248886-11251178 length=2293 scaffold_19_11248886-11251178 database start_codon 601 603 . + 0 transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; scaffold_19_11248886-11251178 database intron 638 767 . + . transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; scaffold_19_11248886-11251178 database intron 881 1480 . + . transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; scaffold_19_11248886-11251178 database CDS 601 637 . + 0 transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; scaffold_19_11248886-11251178 database CDS 768 880 . + 2 transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; scaffold_19_11248886-11251178 database CDS 1481 1693 . + 0 transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; scaffold_19_11248886-11251178 database stop_codon 1691 1693 . + 0 transcript_id "g_1220-T1.1"; gene_id "g_1220-T1"; # Predicted genes for sequence number 213 on both strands # start gene g221 scaffold_19_11248886-11251178 AUGUSTUS gene 1 1693 0.97 + . g221 scaffold_19_11248886-11251178 AUGUSTUS transcript 1 1693 0.97 + . g221.t1 scaffold_19_11248886-11251178 AUGUSTUS intron 1 459 0.97 + . transcript_id "g221.t1"; gene_id "g221"; scaffold_19_11248886-11251178 AUGUSTUS intron 638 767 1 + . transcript_id "g221.t1"; gene_id "g221"; scaffold_19_11248886-11251178 AUGUSTUS intron 881 1480 1 + . transcript_id "g221.t1"; gene_id "g221"; scaffold_19_11248886-11251178 AUGUSTUS CDS 460 637 0.97 + 0 transcript_id "g221.t1"; gene_id "g221"; scaffold_19_11248886-11251178 AUGUSTUS CDS 768 880 1 + 2 transcript_id "g221.t1"; gene_id "g221"; scaffold_19_11248886-11251178 AUGUSTUS CDS 1481 1693 1 + 0 transcript_id "g221.t1"; gene_id "g221"; scaffold_19_11248886-11251178 AUGUSTUS stop_codon 1691 1693 . + 0 transcript_id "g221.t1"; gene_id "g221"; # protein sequence = [DSKSEAGRGEEEEVEEAEEEEEEEEVEENDAEEVETVQSTDIPKPEHMKEETLPVCEKIANNFGESGFETEKVTESSS # APLNGSCDTFKSQPATNKKLSLFKRLSSTKAKQVAETDAASKEGLVREEYSAEGPSSALQSKDSDTKGEKQQARTAATKSAHSATCTIL] # end gene g221 ### # # ----- sequence number 214 (length = 2702, name = scaffold_19_11918789-11921490) ----- # # annotation: # Sequence scaffold_19_11918789-11921490 length=2702 scaffold_19_11918789-11921490 database start_codon 601 603 . + 0 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database intron 664 801 . + . transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database intron 912 1017 . + . transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database intron 1144 1264 . + . transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database intron 1372 1518 . + . transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database intron 1701 1940 . + . transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database CDS 601 663 . + 0 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database CDS 802 911 . + 0 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database CDS 1018 1143 . + 1 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database CDS 1265 1371 . + 1 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database CDS 1519 1700 . + 2 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database CDS 1941 2102 . + 0 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; scaffold_19_11918789-11921490 database stop_codon 2100 2102 . + 0 transcript_id "g_1224-T1.1"; gene_id "g_1224-T1"; # Predicted genes for sequence number 214 on both strands # start gene g222 scaffold_19_11918789-11921490 AUGUSTUS gene 601 2102 1 + . g222 scaffold_19_11918789-11921490 AUGUSTUS transcript 601 2102 1 + . g222.t1 scaffold_19_11918789-11921490 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS intron 664 801 1 + . transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS intron 912 1017 1 + . transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS intron 1144 1264 1 + . transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS intron 1372 1518 1 + . transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS intron 1701 1940 1 + . transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS CDS 601 663 1 + 0 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS CDS 802 911 1 + 0 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS CDS 1018 1143 1 + 1 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS CDS 1265 1371 1 + 1 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS CDS 1519 1700 1 + 2 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS CDS 1941 2102 1 + 0 transcript_id "g222.t1"; gene_id "g222"; scaffold_19_11918789-11921490 AUGUSTUS stop_codon 2100 2102 . + 0 transcript_id "g222.t1"; gene_id "g222"; # protein sequence = [MAWFDIAAKKLGFPTIELFVKAGSDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKPADLQDLAPGTNPPFVTFN # GEVKVDVNKIEEFLEEKLTPPRYPRLAARHPEANTAGIDVFAKFSAYIKNPRKDTNEALEKALLKSLQRLDDFLRTPLSDEMDRNSADRVQDLSRCFL # DGADLTLADCNLLPKLHILKVVARKYRGFEIPADMTGVWRYLNHAYQREEFINTCPAEREIEFAYLDVAKRIK] # end gene g222 ### # # ----- sequence number 215 (length = 6416, name = scaffold_19_12072471-12078886) ----- # # annotation: # Sequence scaffold_19_12072471-12078886 length=6416 scaffold_19_12072471-12078886 database start_codon 601 603 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 646 1114 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 1219 1312 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 1475 1594 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 1723 1803 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 1904 2028 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 2248 2441 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 2587 3043 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 3239 3364 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 3514 3610 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 3774 3888 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 4054 4140 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 4222 4390 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 4643 4827 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 5026 5306 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database intron 5520 5708 . + . transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 601 645 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 1115 1218 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 1313 1474 . + 1 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 1595 1722 . + 1 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 1804 1903 . + 2 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 2029 2247 . + 1 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 2442 2586 . + 1 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 3044 3238 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 3365 3513 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 3611 3773 . + 1 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 3889 4053 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 4141 4221 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 4391 4642 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 4828 5025 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 5307 5519 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database CDS 5709 5816 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; scaffold_19_12072471-12078886 database stop_codon 5814 5816 . + 0 transcript_id "g_1226-T1.1"; gene_id "g_1226-T1"; # Predicted genes for sequence number 215 on both strands # start gene g223 scaffold_19_12072471-12078886 AUGUSTUS gene 601 5816 0.85 + . g223 scaffold_19_12072471-12078886 AUGUSTUS transcript 601 5816 0.85 + . g223.t1 scaffold_19_12072471-12078886 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 646 1114 0.97 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 1219 1312 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 1475 1594 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 1723 1803 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 1904 2028 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 2248 2441 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 2587 3043 0.99 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 3239 3364 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 3514 3610 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 3774 3888 0.9 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 4054 4140 0.99 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 4222 4390 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 4643 4827 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 5026 5306 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS intron 5520 5708 1 + . transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 601 645 0.96 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 1115 1218 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 1313 1474 1 + 1 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 1595 1722 1 + 1 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 1804 1903 1 + 2 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 2029 2247 1 + 1 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 2442 2586 0.99 + 1 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 3044 3238 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 3365 3513 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 3611 3773 1 + 1 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 3889 4053 0.89 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 4141 4221 0.99 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 4391 4642 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 4828 5025 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 5307 5519 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS CDS 5709 5816 1 + 0 transcript_id "g223.t1"; gene_id "g223"; scaffold_19_12072471-12078886 AUGUSTUS stop_codon 5814 5816 . + 0 transcript_id "g223.t1"; gene_id "g223"; # protein sequence = [MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLM # PTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDPRKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQL # EEARRLAALQKRRELRAAGIDVQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYQGLEPNFKRLRQQHLDGELRNEKEERERKRDRQKIKKKKESD # LPSAILQTSGVSEFTRKRSKLVLPAPQISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSVTNSSMGTGLRTPKTPAAQDKILQEAQNLM # ALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGPGSEGMMTPQGGMTPKVAGTPGLTPARTPLRDKLNINTEEQLADPAFAKHL # QRESREQLKLGLLSLPVPKNDFEIVLPENAERELEEAETDHGYIEDAAEIEHRKQVARELEKEKELKMRHTAVQRSLPRPTEVNESILRPSGAEPLSE # LQQAEELIKQEMITMLHHDCLHHPVPSGPSQPQRSKSRGPASTSNNAEHIAYLDSHQYQTVSNEELAQAAELLSAEMDVVRGGMGHGDLSMEAYCQVW # EECYGQVLYLSGQARYTRANLASKKDRLDSLEKKLEINRGHMTCEARRAARLEKRLKVLLGGYQSRALGLLKQHQELWEQVEQSAVELHTFHLLKKQE # DSAIPRRKEALREDVERQQEREKELQQRYGDLLMEKEALLTAKY] # end gene g223 ### # # ----- sequence number 216 (length = 4886, name = scaffold_19_12667866-12672751) ----- # # annotation: # Sequence scaffold_19_12667866-12672751 length=4886 scaffold_19_12667866-12672751 database start_codon 601 603 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 814 1568 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 1778 2491 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 2553 2646 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 2743 3059 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 3225 3551 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 3678 3754 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 3976 4129 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database intron 4156 4278 . + . transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 601 813 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 1569 1777 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 2492 2552 . + 1 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 2647 2742 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 3060 3224 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 3552 3677 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 3755 3975 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 4130 4155 . + 1 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database CDS 4279 4286 . + 2 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; scaffold_19_12667866-12672751 database stop_codon 4284 4286 . + 0 transcript_id "g_1240-T1.1"; gene_id "g_1240-T1"; # Predicted genes for sequence number 216 on both strands # start gene g224 scaffold_19_12667866-12672751 AUGUSTUS gene 1 183 0.5 - . g224 scaffold_19_12667866-12672751 AUGUSTUS transcript 1 183 0.5 - . g224.t1 scaffold_19_12667866-12672751 AUGUSTUS CDS 1 183 0.5 - 0 transcript_id "g224.t1"; gene_id "g224"; scaffold_19_12667866-12672751 AUGUSTUS start_codon 181 183 . - 0 transcript_id "g224.t1"; gene_id "g224"; # protein sequence = [MFGGAGGRGSRVSVASLEGLRNVMRADPDKNGPTNGPNSSAKGPLVAAAAPDDKKTMRGLN] # end gene g224 ### # start gene g225 scaffold_19_12667866-12672751 AUGUSTUS gene 601 4492 0.46 + . g225 scaffold_19_12667866-12672751 AUGUSTUS transcript 601 4492 0.46 + . g225.t1 scaffold_19_12667866-12672751 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 814 1568 1 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 1778 2491 1 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 2553 2646 1 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 2743 3059 0.99 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 3225 3551 1 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 3678 3754 1 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS intron 3976 4278 0.49 + . transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 601 813 0.98 + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 1569 1777 1 + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 2492 2552 1 + 1 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 2647 2742 1 + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 3060 3224 0.99 + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 3552 3677 1 + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 3755 3975 1 + 0 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS CDS 4279 4492 0.49 + 1 transcript_id "g225.t1"; gene_id "g225"; scaffold_19_12667866-12672751 AUGUSTUS stop_codon 4490 4492 . + 0 transcript_id "g225.t1"; gene_id "g225"; # protein sequence = [MSKPGGFSSQSSTPAAGKAGVLKSYPTISSAKDDLMNPVASSMDPKDQTAKTKEKDQMVGLNDKFVAFIDKVQHLEQE # NKKLETRLKILLDQESYKGNIEDIVGQQKADLQRQIDGLDLDRNKLEAELLKNQKDVDHTRQSYEEEFQKKTELENEFVITKKDVDEGHLATVNLALE # LEDLMGELEFLKQGFDEEIKELQSQIQNETVKLTQDNMRALDMDEIVENVKAQYTQMAARTREEAELWNQKKMDDMVLKAGKYEQDVREIKKEIADML # RIIQRLNSDLDALRKRKESLEKDIEEAEAEGLKDVGLAREQKLQLEEALRRAKQDMALQVREYQELMNLKLALDIEIATYRKLLEGEEKRFLKHSNQS # SPCLHADNETLAKLHNHSNILLPEPVTLAISPTANHTSKKRLLIKVEVDEGRVVSESSSYDD] # end gene g225 ### # # ----- sequence number 217 (length = 6484, name = scaffold_20_2061164-2067647) ----- # # annotation: # Sequence scaffold_20_2061164-2067647 length=6484 scaffold_20_2061164-2067647 database start_codon 601 603 . + 0 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database intron 674 2954 . + . transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database intron 3240 3641 . + . transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database intron 3957 4923 . + . transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database intron 5182 5696 . + . transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database CDS 601 673 . + 0 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database CDS 2955 3239 . + 2 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database CDS 3642 3956 . + 2 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database CDS 4924 5181 . + 2 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database CDS 5697 5884 . + 2 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; scaffold_20_2061164-2067647 database stop_codon 5882 5884 . + 0 transcript_id "g_1394-T1.1"; gene_id "g_1394-T1"; # Predicted genes for sequence number 217 on both strands # start gene g226 scaffold_20_2061164-2067647 AUGUSTUS gene 3041 5884 0.7 + . g226 scaffold_20_2061164-2067647 AUGUSTUS transcript 3041 5884 0.7 + . g226.t1 scaffold_20_2061164-2067647 AUGUSTUS start_codon 3041 3043 . + 0 transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS intron 3240 3641 1 + . transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS intron 3957 4923 1 + . transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS intron 5182 5696 0.93 + . transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS CDS 3041 3239 0.75 + 0 transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS CDS 3642 3956 1 + 2 transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS CDS 4924 5181 0.93 + 2 transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS CDS 5697 5884 0.93 + 2 transcript_id "g226.t1"; gene_id "g226"; scaffold_20_2061164-2067647 AUGUSTUS stop_codon 5882 5884 . + 0 transcript_id "g226.t1"; gene_id "g226"; # protein sequence = [MTQDPSVADLFDWESSVGTVLQSGSRNRTWQLNKAEQWDMKPQCFNTFVIGGKDFQCVVWLNMTVYQPPDSIQLLSEM # EGDMVEGTEYKLTCSVENVAPIHKLIIRFYRDNILLDQQLHPDVPQLGPQSANFSLTVTAKKEHDGSEVWCETSLDLETTPVNTSARVRTSVLYRPRI # QASPSDSKTTVSITEGDILKLNCTAQANPAPFYSWTLPQSLGHTHNTCILILPNVKYSGNYTCTVWNSQGSDVITYLVEVKVDWLPIIAGLVGVAILV # LIIIGCCTFKTYHSKTRTGNYELRNLFRSLKGPSNHVALSNEPPL] # end gene g226 ### # # ----- sequence number 218 (length = 9915, name = scaffold_20_7691411-7701325) ----- # # annotation: # Sequence scaffold_20_7691411-7701325 length=9915 scaffold_20_7691411-7701325 database start_codon 601 603 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 701 2042 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 2159 2431 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 2501 2732 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 2872 3729 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 3800 4286 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 4462 4596 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 4760 4915 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 4985 5140 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 6061 6332 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 6459 6685 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 6818 7366 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 7461 7770 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 7848 8102 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 8197 8363 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 8447 8813 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database intron 8930 9167 . + . transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 601 700 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 2043 2158 . + 2 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 2432 2500 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 2733 2871 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 3730 3799 . + 2 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 4287 4461 . + 1 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 4597 4759 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 4916 4984 . + 2 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 5141 6060 . + 2 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 6333 6458 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 6686 6817 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 7367 7460 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 7771 7847 . + 2 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 8103 8196 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 8364 8446 . + 2 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 8814 8929 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database CDS 9168 9315 . + 1 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; scaffold_20_7691411-7701325 database stop_codon 9313 9315 . + 0 transcript_id "g_1416-T1.1"; gene_id "g_1416-T1"; # Predicted genes for sequence number 218 on both strands # start gene g227 scaffold_20_7691411-7701325 AUGUSTUS gene 1 9315 0.23 + . g227 scaffold_20_7691411-7701325 AUGUSTUS transcript 1 9315 0.23 + . g227.t1 scaffold_20_7691411-7701325 AUGUSTUS intron 1 585 0.56 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 701 2042 0.81 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 2159 2431 0.72 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 2501 2732 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 2872 3729 0.9 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 3800 4286 0.88 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 4462 4596 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 4760 4915 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 4985 5140 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 6061 6332 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 6459 6685 0.91 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 6818 7366 0.88 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 7461 7770 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 7848 8102 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 8197 8363 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 8447 8813 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS intron 8930 9167 1 + . transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 586 700 0.53 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 2043 2158 0.63 + 2 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 2432 2500 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 2733 2871 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 3730 3799 0.88 + 2 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 4287 4461 1 + 1 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 4597 4759 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 4916 4984 1 + 2 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 5141 6060 1 + 2 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 6333 6458 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 6686 6817 0.81 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 7367 7460 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 7771 7847 1 + 2 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 8103 8196 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 8364 8446 1 + 2 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 8814 8929 1 + 0 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS CDS 9168 9315 1 + 1 transcript_id "g227.t1"; gene_id "g227"; scaffold_20_7691411-7701325 AUGUSTUS stop_codon 9313 9315 . + 0 transcript_id "g227.t1"; gene_id "g227"; # protein sequence = [GVRTKMQHTSCTEDRIHHAFNRCLDGLRNSPTAAPAWNVLMCSAGQSMNRWSLEELVKREPENFLILLQQIIRRTKEV # LEQCQYELVAPLAIMFSSTLLQTPYWPPDTELLEEAVEVFRCFLTWPEPYCSVCKSLLSTLHQEIKAPGVSFHRLVREEQGLTTSSHRAKTITVLLMN # PGEVPADFLSVAEQLSGIQHSRRDLCITLVKHAYQAAMGAKYALSSIHQALQAKSVEELEEIFATVTDILESAAVSPQKSRGHVTQELEELRERIGIP # ASNGRKSDGMLQTLPVPTAKSYMFHWDTDNFDILNTILEKEHDPAGLQPSEEEEDDDDEEEEEDEEEGDLDEDEEVGAEVYLQEGQEEEAGPELEENN # SMSFMLNGYNSDNRASTLSTVSSFSNASKDSMYSTLSVTSRSSARSNPSAASGVDSDFFEDPEDCSTLSPRRKNAKSSKGRLSLQFYRLFGKPPKNAH # LVRARSLGSPESRDMLAVRSKQRSNSLPQQVHLRSPEPKYQTLRHVCFRRRPILSSDEDGKQVTLRVVVFGADHMAGKVARAYSSLRRRENECPRLSR # AFRLQFYFVPVKRDGNSGGAVVPGGGGLKCPSPGVASGSPVKGADLSLLSTEDSTNDIARFVGMLDPWYERNTLSLLNLPASVVCQQTSKTESESYDN # SYERPLPILVDLVLYYCRHADRPALIQLYQAELTLAGGERRTEVLIHSLELGHTAGTRAIKAMGAARKRFGIDGDREAVPLKLEVVYNRVVISGRSLW # KRADKQYTSITLTKACKNPEELDSKMECLQLTMTEVLKRQNSKSKKGYNQQLSVTEVKVDKVQVTGGDSTTFAVCLDQDEKKIFQSVTKCEVSVCYKP # DSSSDWRLGKTLPGQIQPLNPTFCSLLCLPIATFSGAQP] # end gene g227 ### # # ----- sequence number 219 (length = 5276, name = scaffold_20_9673961-9679236) ----- # # annotation: # Sequence scaffold_20_9673961-9679236 length=5276 scaffold_20_9673961-9679236 database start_codon 601 603 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 604 1059 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 1192 1451 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 1653 2035 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 2124 2297 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 2431 2555 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 2776 3044 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 3173 3336 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 3480 3667 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 3721 3963 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database intron 4165 4562 . + . transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 601 603 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 1060 1191 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 1452 1652 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 2036 2123 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 2298 2430 . + 2 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 2556 2775 . + 1 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 3045 3172 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 3337 3479 . + 1 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 3668 3720 . + 2 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 3964 4164 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database CDS 4563 4676 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; scaffold_20_9673961-9679236 database stop_codon 4674 4676 . + 0 transcript_id "g_1429-T1.1"; gene_id "g_1429-T1"; # Predicted genes for sequence number 219 on both strands # start gene g228 scaffold_20_9673961-9679236 AUGUSTUS gene 1 4676 0.34 + . g228 scaffold_20_9673961-9679236 AUGUSTUS transcript 1 4676 0.34 + . g228.t1 scaffold_20_9673961-9679236 AUGUSTUS intron 1 1059 0.55 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 1192 1451 1 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 1653 2035 1 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 2124 2297 1 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 2431 2555 0.99 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 2776 3044 0.64 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 3173 3336 0.94 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 3480 3667 1 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 3721 3963 1 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS intron 4165 4562 0.98 + . transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 1060 1191 0.94 + 0 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 1452 1652 1 + 0 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 2036 2123 1 + 0 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 2298 2430 1 + 2 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 2556 2775 0.64 + 1 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 3045 3172 0.94 + 0 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 3337 3479 0.94 + 1 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 3668 3720 1 + 2 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 3964 4164 0.98 + 0 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS CDS 4563 4676 0.98 + 0 transcript_id "g228.t1"; gene_id "g228"; scaffold_20_9673961-9679236 AUGUSTUS stop_codon 4674 4676 . + 0 transcript_id "g228.t1"; gene_id "g228"; # protein sequence = [PHRKKKSFIQKKNAVTFHLVHRSQRDPLAADENAPQHVLLPAHKAEVEKQREEQRNFGVFFDDDYNYLQHLKETSQPA # ELVSSSQPRADRRSIGQQDEDVEEMEERVEVAGGATLNLPSSVFASEFEEEVGMLNKAAPISGPRLDMDPDIVAALDEDFDYDDPDNLLDDDFIIKAN # DVTASVAMTGSDDDEWEDTDSDTDSDVDSDGGYSGVEGEAPGGREFMFMDEETKSRFTEYSLTSSVMRRNEQLTLLDDRFEKFYEQFDDDEIGALDNA # ELEGFIEPDSARLEDIIKDYFVQKKKDFQRPDDLGPKELHAVKEDDEEEDEDKQEMETLIIEAPAEKWDCETIISTYSNLYNRPKIIADPPKTKPIRV # SNRTGIPLDVLPGRGPTAKQAERMERINDSDLPRVATQPRPKDESQEERRARKQAIKEERKERRTEKKANKMAFKQEKALQEKQMLGLRANVQGLKLS] # end gene g228 ### # # ----- sequence number 220 (length = 4620, name = scaffold_21_2416707-2421326) ----- # # annotation: # Sequence scaffold_21_2416707-2421326 length=4620 scaffold_21_2416707-2421326 database start_codon 601 603 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 611 1262 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 1403 1476 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 1589 1693 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 1784 1898 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 1991 2103 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 2345 2583 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 2727 2818 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 2934 3075 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 3222 3332 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 3434 3620 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database intron 3832 3930 . + . transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 601 610 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 1263 1402 . + 2 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 1477 1588 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 1694 1783 . + 2 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 1899 1990 . + 2 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 2104 2344 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 2584 2726 . + 2 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 2819 2933 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 3076 3221 . + 2 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 3333 3433 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 3621 3831 . + 1 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database CDS 3931 4209 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; scaffold_21_2416707-2421326 database stop_codon 4207 4209 . + 0 transcript_id "g_1466-T1.1"; gene_id "g_1466-T1"; # Predicted genes for sequence number 220 on both strands # start gene g229 scaffold_21_2416707-2421326 AUGUSTUS gene 592 4209 0.61 + . g229 scaffold_21_2416707-2421326 AUGUSTUS transcript 592 4209 0.61 + . g229.t1 scaffold_21_2416707-2421326 AUGUSTUS start_codon 592 594 . + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 611 1262 0.97 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 1403 1476 0.97 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 1589 1693 0.98 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 1784 1898 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 1991 2103 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 2345 2583 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 2727 2818 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 2934 3075 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 3222 3332 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 3434 3620 0.85 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS intron 3832 3930 1 + . transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 592 610 0.75 + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 1263 1402 0.99 + 2 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 1477 1588 0.95 + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 1694 1783 1 + 2 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 1899 1990 1 + 2 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 2104 2344 1 + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 2584 2726 1 + 2 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 2819 2933 1 + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 3076 3221 1 + 2 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 3333 3433 1 + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 3621 3831 0.85 + 1 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS CDS 3931 4209 1 + 0 transcript_id "g229.t1"; gene_id "g229"; scaffold_21_2416707-2421326 AUGUSTUS stop_codon 4207 4209 . + 0 transcript_id "g229.t1"; gene_id "g229"; # protein sequence = [MATMEVERQRGRYAALAIAAVVIVVGVPLWWRTTETYRAWLPVHQINELAQLQLQLNVDVEVVFSRGTLTPEQEKKVP # LTQTRDEEHAVDEHTSLRYKYETKYRTATIMEEDALNQLTAQEADVALHTLSESPCGSVVVHVIPESSSLLPEGVSVYVGRRRTAVLRTSSAPRGGVA # LKEALAALEPQVTKVLHMMSFSHADITAAISDRVRLSDVSMESLVDSMRAFKSSPGYEITFSLLNPDPKSHRLHWDIEGAVQNYIQPLLTKLAPIANF # SIDSQILYYAVLGVNPRFDSSSNAYTLNAESLAHVINPVEARLGSSAASSNPVLNFLLYVPDAHHSPLHIHGHRKQEVPSNAFHSPRWGGIMVYNVND # RYGPGAEFPVDISIDMARVMGVFLAQLRLMLGVQSSTPPPGFLVEPCGSAGLADWELDRLMWSRSVENVATATTTITSLAQLLDQIGNIVINDNIAQQ # VSSAVGSLQLAVAELEMGNLGFALQYSKEAILASERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMCVPILLSLLKIASEIRQRRKDKQAKKD] # end gene g229 ### # # ----- sequence number 221 (length = 2116, name = scaffold_21_2421327-2423442) ----- # # annotation: # Sequence scaffold_21_2421327-2423442 length=2116 scaffold_21_2421327-2423442 database start_codon 412 414 . + 0 transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; scaffold_21_2421327-2423442 database intron 603 945 . + . transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; scaffold_21_2421327-2423442 database intron 1125 1223 . + . transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; scaffold_21_2421327-2423442 database CDS 412 602 . + 0 transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; scaffold_21_2421327-2423442 database CDS 946 1124 . + 1 transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; scaffold_21_2421327-2423442 database CDS 1224 1516 . + 2 transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; scaffold_21_2421327-2423442 database stop_codon 1514 1516 . + 0 transcript_id "g_1528-T1.1"; gene_id "g_1528-T1"; # Predicted genes for sequence number 221 on both strands # start gene g230 scaffold_21_2421327-2423442 AUGUSTUS gene 412 1812 0.7 + . g230 scaffold_21_2421327-2423442 AUGUSTUS transcript 412 1812 0.7 + . g230.t1 scaffold_21_2421327-2423442 AUGUSTUS start_codon 412 414 . + 0 transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS intron 603 945 0.7 + . transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS intron 1125 1223 0.98 + . transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS intron 1397 1653 1 + . transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS CDS 412 602 0.7 + 0 transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS CDS 946 1124 0.7 + 1 transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS CDS 1224 1396 1 + 2 transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS CDS 1654 1812 1 + 0 transcript_id "g230.t1"; gene_id "g230"; scaffold_21_2421327-2423442 AUGUSTUS stop_codon 1810 1812 . + 0 transcript_id "g230.t1"; gene_id "g230"; # protein sequence = [MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDY # DGYRLRVEFPRSGRGGGRGGGGGIGAPRGRYGPPSRRSENRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTK # FRSHEGETAYIRVKMDGPRSPSYGHSRSRSRSDSRSRSYSPRRTRGSPNYSRSRSRT] # end gene g230 ### # # ----- sequence number 222 (length = 11834, name = scaffold_21_5444790-5456623) ----- # # annotation: # Sequence scaffold_21_5444790-5456623 length=11834 scaffold_21_5444790-5456623 database start_codon 601 603 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 850 2060 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 2130 2550 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 2662 3795 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 3844 4306 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 4427 4534 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 4634 5649 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 5724 7545 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 7675 9773 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 9864 10548 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database intron 10705 11089 . + . transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 601 849 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 2061 2129 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 2551 2661 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 3796 3843 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 4307 4426 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 4535 4633 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 5650 5723 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 7546 7674 . + 1 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 9774 9863 . + 1 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 10549 10704 . + 1 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database CDS 11090 11234 . + 1 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; scaffold_21_5444790-5456623 database stop_codon 11232 11234 . + 0 transcript_id "g_1482-T1.1"; gene_id "g_1482-T1"; # Predicted genes for sequence number 222 on both strands # start gene g231 scaffold_21_5444790-5456623 AUGUSTUS gene 601 11234 0.15 + . g231 scaffold_21_5444790-5456623 AUGUSTUS transcript 601 11234 0.15 + . g231.t1 scaffold_21_5444790-5456623 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 667 2060 0.45 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 2130 2550 0.92 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 2662 3795 1 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 3844 4306 1 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 4427 4534 1 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 4634 5649 0.88 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 5724 5802 0.88 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 5911 7545 0.44 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 7675 9773 0.8 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 9864 10548 0.99 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS intron 10705 11089 1 + . transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 601 666 0.49 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 2061 2129 0.92 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 2551 2661 1 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 3796 3843 1 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 4307 4426 1 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 4535 4633 1 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 5650 5723 0.88 + 0 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 5803 5910 0.42 + 1 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 7546 7674 0.97 + 1 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 9774 9863 0.99 + 1 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 10549 10704 0.99 + 1 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS CDS 11090 11234 1 + 1 transcript_id "g231.t1"; gene_id "g231"; scaffold_21_5444790-5456623 AUGUSTUS stop_codon 11232 11234 . + 0 transcript_id "g231.t1"; gene_id "g231"; # protein sequence = [MRRRVTGTALEMLGCGTITSPRASVRLTPTTLLYAGKSPDGHHVLSSATYLHKELPVRIAHRIKGFRSLPFIIGCNPT # ILQVHELYIRAYHKLCEFPPIKDQEMEGRFSKLVQQLLDDHKDVVTLLAEGFRECRRHIQDETLVRNFLDTTLTSRLGIRMLATHHLSLHEDNPDFVG # IICRRLSPKKIIEKWVDFASECGDDKEECGDDKEECGGDKEECGGDKEEFGDDKEERLCEHQYGNSPRVRINGHVAARFPFIPLPLDYILPELLKNAM # RATMESHLDTPYNVPDVGVTIANNDTDFVIRISDRGGGIPHSIIDKVMDYHFSTAEESAQDPRMNTLFNNITNSGPQSGPMHGFGFGLPTSRAYAEYL # GGSLSIQSMQGIGTDVYLRLRHIDGKGESFRV] # end gene g231 ### # # ----- sequence number 223 (length = 3501, name = scaffold_21_6189671-6193171) ----- # # annotation: # Sequence scaffold_21_6189671-6193171 length=3501 scaffold_21_6189671-6193171 database start_codon 601 603 . + 0 transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; scaffold_21_6189671-6193171 database intron 1067 2124 . + . transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; scaffold_21_6189671-6193171 database intron 2189 2714 . + . transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; scaffold_21_6189671-6193171 database CDS 601 1066 . + 0 transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; scaffold_21_6189671-6193171 database CDS 2125 2188 . + 2 transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; scaffold_21_6189671-6193171 database CDS 2715 2901 . + 1 transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; scaffold_21_6189671-6193171 database stop_codon 2899 2901 . + 0 transcript_id "g_1492-T1.1"; gene_id "g_1492-T1"; # Predicted genes for sequence number 223 on both strands # start gene g232 scaffold_21_6189671-6193171 AUGUSTUS gene 601 2901 0.81 + . g232 scaffold_21_6189671-6193171 AUGUSTUS transcript 601 2901 0.81 + . g232.t1 scaffold_21_6189671-6193171 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g232.t1"; gene_id "g232"; scaffold_21_6189671-6193171 AUGUSTUS intron 1067 2124 0.98 + . transcript_id "g232.t1"; gene_id "g232"; scaffold_21_6189671-6193171 AUGUSTUS intron 2189 2714 0.97 + . transcript_id "g232.t1"; gene_id "g232"; scaffold_21_6189671-6193171 AUGUSTUS CDS 601 1066 0.83 + 0 transcript_id "g232.t1"; gene_id "g232"; scaffold_21_6189671-6193171 AUGUSTUS CDS 2125 2188 0.97 + 2 transcript_id "g232.t1"; gene_id "g232"; scaffold_21_6189671-6193171 AUGUSTUS CDS 2715 2901 1 + 1 transcript_id "g232.t1"; gene_id "g232"; scaffold_21_6189671-6193171 AUGUSTUS stop_codon 2899 2901 . + 0 transcript_id "g232.t1"; gene_id "g232"; # protein sequence = [MTERRIPFSFLRTPSWDPFRDWYQGSRIFDQAFGMPSLPEEFSTFPSTHWPGYLRPNHMGMDAIMPPTMMPQMPQMPH # MHHPSSPLVHSSAMAGQHPMMLPQAPPAYGRALSRQLSSGMSEIKQTKDAWKICLDVNHFAPEELVVKTKDGVLEITGQHEERRDEHGFVSRCFTRKY # TLPPTANLEKVASTLSPEGVLTVEAPLNKQAIKAAEINIPVTMGSSAKNGQAMLDEEPKEEQ] # end gene g232 ### # # ----- sequence number 224 (length = 6366, name = scaffold_21_6433405-6439770) ----- # # annotation: # Sequence scaffold_21_6433405-6439770 length=6366 scaffold_21_6433405-6439770 database start_codon 601 603 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 802 1130 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 1317 1449 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 1632 1740 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 1884 1987 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 2176 2508 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 2659 2760 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 2940 3135 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 3283 3903 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 3989 4266 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 4444 4715 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database intron 4852 5614 . + . transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 601 801 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 1131 1316 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 1450 1631 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 1741 1883 . + 1 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 1988 2175 . + 2 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 2509 2658 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 2761 2939 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 3136 3282 . + 1 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 3904 3988 . + 1 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 4267 4443 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 4716 4851 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database CDS 5615 5766 . + 2 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; scaffold_21_6433405-6439770 database stop_codon 5764 5766 . + 0 transcript_id "g_1493-T1.1"; gene_id "g_1493-T1"; # Predicted genes for sequence number 224 on both strands # start gene g233 scaffold_21_6433405-6439770 AUGUSTUS gene 1149 5766 0.28 + . g233 scaffold_21_6433405-6439770 AUGUSTUS transcript 1149 5766 0.28 + . g233.t1 scaffold_21_6433405-6439770 AUGUSTUS start_codon 1149 1151 . + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 1317 1449 0.99 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 1632 1740 1 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 1884 1987 1 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 2176 2508 0.73 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 2659 2760 1 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 2940 3135 0.86 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 3283 3903 0.98 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 3989 4266 0.99 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 4444 4715 1 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS intron 4852 5614 1 + . transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 1149 1316 0.54 + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 1450 1631 1 + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 1741 1883 1 + 1 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 1988 2175 0.73 + 2 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 2509 2658 1 + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 2761 2939 1 + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 3136 3282 0.86 + 1 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 3904 3988 0.98 + 1 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 4267 4443 1 + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 4716 4851 1 + 0 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS CDS 5615 5766 0.82 + 2 transcript_id "g233.t1"; gene_id "g233"; scaffold_21_6433405-6439770 AUGUSTUS stop_codon 5764 5766 . + 0 transcript_id "g233.t1"; gene_id "g233"; # protein sequence = [MPVPASYNDITQDYRLRDFVGWVWYEREVVVPQRWLADEGTRVMLRVGSAHYNSVVWVNGVQVTEHEGGHLPFEAEIG # AVVRKGEGVSCRITIAVNNTLTLQTLPPGTIQHMNDRTMYPAGYFVQSTNFDFFNYAGLHRPVLLYTTPKAYVDDITVVTSFSDNIGLVSYTVSVVGS # PSPTVKVTLSDMNGRCVASSTGTSGVLKVVDVNLWWPYLMHENPGYLYSMEVHMTTGEAPVYSDVYALPVGIRTVQVTSTQFLINGKPFYFHGVNKHE # DSDIRGKGLDWALIVKDFNLLKWLGANSFRTSHYPYAEEIMQMCDRHGIVVIDECPGVGIKDIRSFGNASLAHHLVVMEELVRRDKNHASVVMWSVAN # EPASEMPPAGQYFKTVIAHTKSLDQTRPVTYVSSSDYARDKGAPYVDVICVNSYFSWYHDPGHFEVIPIQLKTQFENWYGKYQKPIIQSEYGADAVPG # LHTDPPMMFTEEYQKAVLQSYHDVFDQKRKDYVIGELIWNFADFMTAQTVTRVVGNKKGIFSRQRQPKAGAFLLKERYWRLANETGLLPYWTRYPCLL] # end gene g233 ### # # ----- sequence number 225 (length = 3202, name = scaffold_21_6499961-6503162) ----- # # annotation: # Sequence scaffold_21_6499961-6503162 length=3202 scaffold_21_6499961-6503162 database start_codon 601 603 . + 0 transcript_id "g_1495-T1.1"; gene_id "g_1495-T1"; scaffold_21_6499961-6503162 database intron 818 1286 . + . transcript_id "g_1495-T1.1"; gene_id "g_1495-T1"; scaffold_21_6499961-6503162 database CDS 601 817 . + 0 transcript_id "g_1495-T1.1"; gene_id "g_1495-T1"; scaffold_21_6499961-6503162 database CDS 1287 2602 . + 2 transcript_id "g_1495-T1.1"; gene_id "g_1495-T1"; scaffold_21_6499961-6503162 database stop_codon 2600 2602 . + 0 transcript_id "g_1495-T1.1"; gene_id "g_1495-T1"; # Predicted genes for sequence number 225 on both strands # start gene g234 scaffold_21_6499961-6503162 AUGUSTUS gene 601 2602 0.4 + . g234 scaffold_21_6499961-6503162 AUGUSTUS transcript 601 2602 0.4 + . g234.t1 scaffold_21_6499961-6503162 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g234.t1"; gene_id "g234"; scaffold_21_6499961-6503162 AUGUSTUS intron 818 1286 1 + . transcript_id "g234.t1"; gene_id "g234"; scaffold_21_6499961-6503162 AUGUSTUS CDS 601 817 0.41 + 0 transcript_id "g234.t1"; gene_id "g234"; scaffold_21_6499961-6503162 AUGUSTUS CDS 1287 2602 0.96 + 2 transcript_id "g234.t1"; gene_id "g234"; scaffold_21_6499961-6503162 AUGUSTUS stop_codon 2600 2602 . + 0 transcript_id "g234.t1"; gene_id "g234"; # protein sequence = [MAATKAELLLSALQISDPMGFPHSPLDSYPKLEELMLLHSAATGSSFLAASAAEVAGLGTGESGDAYEHLTGDTLPDL # SSLSCDKPLSEQPFPTARLPSLSYTGRFTLEPTSNACSNSLWAEPLFSLVSGLVNMASTPTSAVASCSSTSSVNSSTSYSLPSLSCSIHVSEPSPIYS # AAPTSYSTTNPDLFLDSTQSFATSSQYPPPAYPSSSKPCTTGTTLPMIPDYLFPSHQQGDLNLLAPDQKPLQTHSLQQQHQQLSLTPLSTIKAFASQT # GTVTAQDLKGPTFQSQLVKSSRARKYPSRQCKTPPHERPYACPVESCDRRFSRSDELTRHVRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF # ACDVCGRKFARSDERKRHAKIHLRQKDKKPEKSSAPITIPSPAVSGYSSPSASYHSPTSSYPSPGSSYSPVPSCYSSPGHASYPSPCTSSYPSTFPTQ # VSSFSTSSFTSSSPSLYSSPVGTPQSDLQSSLSPQDIDLC] # end gene g234 ### # # ----- sequence number 226 (length = 1958, name = scaffold_21_6710928-6712885) ----- # # annotation: # Sequence scaffold_21_6710928-6712885 length=1958 scaffold_21_6710928-6712885 database start_codon 601 603 . + 0 transcript_id "g_1499-T1.1"; gene_id "g_1499-T1"; scaffold_21_6710928-6712885 database intron 724 1019 . + . transcript_id "g_1499-T1.1"; gene_id "g_1499-T1"; scaffold_21_6710928-6712885 database CDS 601 723 . + 0 transcript_id "g_1499-T1.1"; gene_id "g_1499-T1"; scaffold_21_6710928-6712885 database CDS 1020 1358 . + 0 transcript_id "g_1499-T1.1"; gene_id "g_1499-T1"; scaffold_21_6710928-6712885 database stop_codon 1356 1358 . + 0 transcript_id "g_1499-T1.1"; gene_id "g_1499-T1"; # Predicted genes for sequence number 226 on both strands # start gene g235 scaffold_21_6710928-6712885 AUGUSTUS gene 601 1358 0.68 + . g235 scaffold_21_6710928-6712885 AUGUSTUS transcript 601 1358 0.68 + . g235.t1 scaffold_21_6710928-6712885 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g235.t1"; gene_id "g235"; scaffold_21_6710928-6712885 AUGUSTUS intron 724 1019 1 + . transcript_id "g235.t1"; gene_id "g235"; scaffold_21_6710928-6712885 AUGUSTUS CDS 601 723 0.68 + 0 transcript_id "g235.t1"; gene_id "g235"; scaffold_21_6710928-6712885 AUGUSTUS CDS 1020 1358 1 + 0 transcript_id "g235.t1"; gene_id "g235"; scaffold_21_6710928-6712885 AUGUSTUS stop_codon 1356 1358 . + 0 transcript_id "g235.t1"; gene_id "g235"; # protein sequence = [MSVNKASVHAKWIIGKVVGTKMQKTAKVRVTRMVLDPYLLKFYNKKKTYFAHDVLQQCTVGDIVLLKALTERRSKHVK # HELAEIVHKVGRGVDPLTGKRVAGTEFLEPLSSHTHHLEQDTTLTEKLQELNISATSSDNSSACTKPASSAGTTV] # end gene g235 ### # # ----- sequence number 227 (length = 3607, name = scaffold_21_7385656-7389262) ----- # # annotation: # Sequence scaffold_21_7385656-7389262 length=3607 scaffold_21_7385656-7389262 database start_codon 601 603 . + 0 transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; scaffold_21_7385656-7389262 database intron 647 1895 . + . transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; scaffold_21_7385656-7389262 database intron 2855 2995 . + . transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; scaffold_21_7385656-7389262 database CDS 601 646 . + 0 transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; scaffold_21_7385656-7389262 database CDS 1896 2854 . + 2 transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; scaffold_21_7385656-7389262 database CDS 2996 3007 . + 0 transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; scaffold_21_7385656-7389262 database stop_codon 3005 3007 . + 0 transcript_id "g_1503-T1.1"; gene_id "g_1503-T1"; # Predicted genes for sequence number 227 on both strands # start gene g236 scaffold_21_7385656-7389262 AUGUSTUS gene 1907 3035 0.5 + . g236 scaffold_21_7385656-7389262 AUGUSTUS transcript 1907 3035 0.5 + . g236.t1 scaffold_21_7385656-7389262 AUGUSTUS start_codon 1907 1909 . + 0 transcript_id "g236.t1"; gene_id "g236"; scaffold_21_7385656-7389262 AUGUSTUS intron 2776 2995 0.5 + . transcript_id "g236.t1"; gene_id "g236"; scaffold_21_7385656-7389262 AUGUSTUS CDS 1907 2775 0.5 + 0 transcript_id "g236.t1"; gene_id "g236"; scaffold_21_7385656-7389262 AUGUSTUS CDS 2996 3035 0.51 + 1 transcript_id "g236.t1"; gene_id "g236"; scaffold_21_7385656-7389262 AUGUSTUS stop_codon 3033 3035 . + 0 transcript_id "g236.t1"; gene_id "g236"; # protein sequence = [MEDRRRAAVGAPGDPKLRASVVKTSQSAEAHQSTVGEEVMAPIRVKEEDVSEVPLKVPRFQYVDFPSLHQCIQQMTVP # PVDSWLEGCPLGGSSAHTTLSPKEPVQPKFKYVDYPSLHHCIKQLSVPPLESWSSGLARPRGGGRPNFNSQSVSQANSVKGHQTGHNSAAPTHRQGAY # TAFPFPGPNPGSGQEVSPSEQTARQHLSCPTRTRPSGDPSGSHGPLKRPSNALSSGSGNNRGMSSSTGRDDASSASHGAADGVIQRNTAGPVHRVRED # HGNTLHHKRFWRAVPEGPTDTLAEEKFV] # end gene g236 ### # # ----- sequence number 228 (length = 3668, name = scaffold_22_613528-617195) ----- # # annotation: # Sequence scaffold_22_613528-617195 length=3668 scaffold_22_613528-617195 database start_codon 601 603 . + 0 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database intron 626 1118 . + . transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database intron 1227 1627 . + . transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database intron 1773 2083 . + . transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database intron 2197 2425 . + . transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database intron 2586 2863 . + . transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database CDS 601 625 . + 0 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database CDS 1119 1226 . + 2 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database CDS 1628 1772 . + 2 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database CDS 2084 2196 . + 1 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database CDS 2426 2585 . + 2 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database CDS 2864 3068 . + 1 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; scaffold_22_613528-617195 database stop_codon 3066 3068 . + 0 transcript_id "g_1542-T1.1"; gene_id "g_1542-T1"; # Predicted genes for sequence number 228 on both strands # start gene g237 scaffold_22_613528-617195 AUGUSTUS gene 1 3068 0.95 + . g237 scaffold_22_613528-617195 AUGUSTUS transcript 1 3068 0.95 + . g237.t1 scaffold_22_613528-617195 AUGUSTUS intron 1 531 0.95 + . transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS intron 626 1118 1 + . transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS intron 1227 1627 1 + . transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS intron 1773 2083 1 + . transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS intron 2197 2425 1 + . transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS intron 2586 2863 1 + . transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS CDS 532 625 0.98 + 0 transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS CDS 1119 1226 1 + 2 transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS CDS 1628 1772 1 + 2 transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS CDS 2084 2196 1 + 1 transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS CDS 2426 2585 1 + 2 transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS CDS 2864 3068 1 + 1 transcript_id "g237.t1"; gene_id "g237"; scaffold_22_613528-617195 AUGUSTUS stop_codon 3066 3068 . + 0 transcript_id "g237.t1"; gene_id "g237"; # protein sequence = [VTIVTNNVPAVGGESGETRCQGDMEKADMVDGIKESVCWTPPPEVNPNKTCEYQALCSRFKDLLTLPDGYFNEETKCN # LCYCESCHKLRGDEAYYKRGEPPRDYALPFGWCRFALRIKPHCEVSNALKKWHIAYHGTSVGALRRTLDHSQLLSGTSSIFSVSPVKTDGPNGYSEPE # ENSAPEREVPKVQLSPTMRYSGLEVFAPKVQFRDPRSQRCHLAQVGFQVCVRPGSYKVGPQTLGSSEALDPRFSNTEIEWITKEHGCTLLYGLLVRVE] # end gene g237 ### # # ----- sequence number 229 (length = 4329, name = scaffold_22_7883529-7887857) ----- # # annotation: # Sequence scaffold_22_7883529-7887857 length=4329 scaffold_22_7883529-7887857 database start_codon 601 603 . + 0 transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database intron 1451 1576 . + . transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database intron 2556 2690 . + . transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database intron 2862 3209 . + . transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database CDS 601 1450 . + 0 transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database CDS 1577 2555 . + 2 transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database CDS 2691 2861 . + 1 transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database CDS 3210 3729 . + 1 transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; scaffold_22_7883529-7887857 database stop_codon 3727 3729 . + 0 transcript_id "g_1573-T1.1"; gene_id "g_1573-T1"; # Predicted genes for sequence number 229 on both strands # start gene g238 scaffold_22_7883529-7887857 AUGUSTUS gene 601 3729 0.85 + . g238 scaffold_22_7883529-7887857 AUGUSTUS transcript 601 3729 0.85 + . g238.t1 scaffold_22_7883529-7887857 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS intron 1451 1576 1 + . transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS intron 2556 2690 0.98 + . transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS intron 2862 3209 0.93 + . transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS CDS 601 1450 0.93 + 0 transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS CDS 1577 2555 1 + 2 transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS CDS 2691 2861 0.98 + 1 transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS CDS 3210 3729 0.93 + 1 transcript_id "g238.t1"; gene_id "g238"; scaffold_22_7883529-7887857 AUGUSTUS stop_codon 3727 3729 . + 0 transcript_id "g238.t1"; gene_id "g238"; # protein sequence = [MEITRGCLSKEWEECWRREKEQRRRAMKEAGEKVTEDDPELRRIVAYNDNKMGLRRRDGEEERKWKRKNRRTSGREGK # EEEDERWNEKGEGSEEEQKISTYSRDTYASELFQTVQEFRDSSLLTDLTLSTEDGLSFQVHSPVLAAVSSLIHHNLEQRDAEWETRGGPVNMDTQRKV # SMVLAPGVDRVGLAGVLEFAYTGVIAALNTDNVVQIQTAAEVLGVPRVLELCRKKEEQMTIGGQEKTEERKMSVAEQMNISLQSISQLWTQRVGCDVV # LEVEGTSLHAHRVVLAASSEYFRAMFTCGMKESQQYCVTLPFLVASELEILIGHSYSGSLPLSWERVFEISCTALQLQFQATFSLCLNFLRQEMDAQS # CLDVASFAEAYGMMELFDAAEDFVLRNFLDVASTAKFLHLPKEKLLDFLRRDGLCAPSELWVFRAVVSWVQADLEARLPQARELMSGVRFPLMTFREF # REVRAVNLRMECSSGGRGGEEGGGEEEVELYRSALSEFSTSLPGSQNCHRVRKPRDALVLVGGDQLDLDTGRRVPSKELWFANSLRSGTGLVKEVEWR # ILGEMPEEPRFRHGVAVLAGELYVVGGCEFYAKDDTLKSAYRYDPQLDSWLRLADMQTRRSNFSLVVRGERLYAIGGDRDISTNMDTVEVYSAEDDAW # SFSRHLHQPLSGFAASVLDDDIFISGGFNCHYQCLVSVFLYHPERGTTCLANMNLDRAMHCMEVLGHRLYVAGGVCNFQKFYTDQLSCEVYDPARDTW # SSIASLTIPHVGPASAVLEGKLYVLGGYCQEDYRESKMVHRYDPSSQRWENMGRMPGPNTDIRACVLHLPQHLRL] # end gene g238 ### # # ----- sequence number 230 (length = 2601, name = scaffold_23_1341784-1344384) ----- # # annotation: # Sequence scaffold_23_1341784-1344384 length=2601 scaffold_23_1341784-1344384 database start_codon 601 603 . + 0 transcript_id "g_1585-T1.1"; gene_id "g_1585-T1"; scaffold_23_1341784-1344384 database intron 742 1683 . + . transcript_id "g_1585-T1.1"; gene_id "g_1585-T1"; scaffold_23_1341784-1344384 database CDS 601 741 . + 0 transcript_id "g_1585-T1.1"; gene_id "g_1585-T1"; scaffold_23_1341784-1344384 database CDS 1684 2001 . + 0 transcript_id "g_1585-T1.1"; gene_id "g_1585-T1"; scaffold_23_1341784-1344384 database stop_codon 1999 2001 . + 0 transcript_id "g_1585-T1.1"; gene_id "g_1585-T1"; # Predicted genes for sequence number 230 on both strands # start gene g239 scaffold_23_1341784-1344384 AUGUSTUS gene 1 2001 0.53 + . g239 scaffold_23_1341784-1344384 AUGUSTUS transcript 1 2001 0.53 + . g239.t1 scaffold_23_1341784-1344384 AUGUSTUS intron 1 128 0.99 + . transcript_id "g239.t1"; gene_id "g239"; scaffold_23_1341784-1344384 AUGUSTUS intron 742 1683 0.96 + . transcript_id "g239.t1"; gene_id "g239"; scaffold_23_1341784-1344384 AUGUSTUS CDS 129 741 0.96 + 1 transcript_id "g239.t1"; gene_id "g239"; scaffold_23_1341784-1344384 AUGUSTUS CDS 1684 2001 0.54 + 0 transcript_id "g239.t1"; gene_id "g239"; scaffold_23_1341784-1344384 AUGUSTUS stop_codon 1999 2001 . + 0 transcript_id "g239.t1"; gene_id "g239"; # protein sequence = [RQQRQQGGGAGGSVKIQNPLQQQLPQQYHNQQQQQQPSSQLQQQLQPQQQISAQSGGNGCRPPREQHGRQYQSYGGQR # PVPSHHGYSLNRRWNNNQKQHIGPNLGHGQPPIAGVKGASSKNTKEKETEHFSFEESKLDPDGKVAVREDLRSCTTTDQMVNQNESGCPNQGTTGSVS # TREDQVDRPMVNLLQSSKERLRKRLKNKEEVCVAVELDPQQNLLDRLLEILSSMRNNSSGVDVQLSSFMEEAQSSARSEETLAHIVSTIYGKAVNDRS # FAATAAKLCDKMALFMVEGTKFRSLLLNMLQVSDL] # end gene g239 ### # # ----- sequence number 231 (length = 4486, name = scaffold_23_2269659-2274144) ----- # # annotation: # Sequence scaffold_23_2269659-2274144 length=4486 scaffold_23_2269659-2274144 database start_codon 601 603 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 629 1404 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 1566 1685 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 1836 1947 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 2060 2327 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 2480 2640 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 2812 2971 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 3110 3208 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 3305 3504 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database intron 3562 3733 . + . transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 601 628 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 1405 1565 . + 2 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 1686 1835 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 1948 2059 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 2328 2479 . + 2 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 2641 2811 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 2972 3109 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 3209 3304 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 3505 3561 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database CDS 3734 3886 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; scaffold_23_2269659-2274144 database stop_codon 3884 3886 . + 0 transcript_id "g_1593-T1.1"; gene_id "g_1593-T1"; # Predicted genes for sequence number 231 on both strands # start gene g240 scaffold_23_2269659-2274144 AUGUSTUS gene 601 3886 0.69 + . g240 scaffold_23_2269659-2274144 AUGUSTUS transcript 601 3886 0.69 + . g240.t1 scaffold_23_2269659-2274144 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 629 1404 0.93 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 1566 1685 1 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 1836 1947 0.84 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 2060 2327 1 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 2480 2640 0.96 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 2812 2971 1 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 3110 3208 1 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 3305 3504 1 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS intron 3562 3742 0.93 + . transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 601 628 0.93 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 1405 1565 1 + 2 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 1686 1835 1 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 1948 2059 0.84 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 2328 2479 0.96 + 2 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 2641 2811 1 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 2972 3109 1 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 3209 3304 1 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 3505 3561 1 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS CDS 3743 3886 0.93 + 0 transcript_id "g240.t1"; gene_id "g240"; scaffold_23_2269659-2274144 AUGUSTUS stop_codon 3884 3886 . + 0 transcript_id "g240.t1"; gene_id "g240"; # protein sequence = [MAALFKAKKALGLCLSGCRGLTQLAELPEMHQMLRQTCRDYSDRELAPIAAQLDKEHRFPAKQVRELGEMGVMAIEVP # EELGGAGMDYLAYCLAVEEISRGCASTGVVVSVNNSLYIGPVLKYGTEEQKQQWIPPFTTGEKVGCFSLSEPGNGSDAGAASTMAQQDGDEWVLNGTK # AWITNSWDASATVVFATTDKKLKHKGISAFLVPMPHPGLSLGKKEDKLGIRASSTANIILEDCRIPLGNMLGPRGAGFKIAMQTLDSGRIGIASQALG # IAQASLDCAADYAHKRTAFGAPIGKMQAIQFKLADMAVALESARLLTWKSALLRDAKMPYSKEAAMAKLAASEAATFCAHQVLGGMGYVTDMPAERHY # RDARITEIYEGTSEIQRLVIAGQLLKEYKQ] # end gene g240 ### # # ----- sequence number 232 (length = 2992, name = scaffold_23_2574881-2577872) ----- # # annotation: # Sequence scaffold_23_2574881-2577872 length=2992 scaffold_23_2574881-2577872 database start_codon 601 603 . + 0 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database intron 656 796 . + . transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database intron 846 1124 . + . transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database intron 1382 1684 . + . transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database intron 1919 2192 . + . transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database CDS 601 655 . + 0 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database CDS 797 845 . + 2 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database CDS 1125 1381 . + 1 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database CDS 1685 1918 . + 2 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database CDS 2193 2392 . + 2 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; scaffold_23_2574881-2577872 database stop_codon 2390 2392 . + 0 transcript_id "g_1598-T1.1"; gene_id "g_1598-T1"; # Predicted genes for sequence number 232 on both strands # start gene g241 scaffold_23_2574881-2577872 AUGUSTUS gene 597 2392 0.83 + . g241 scaffold_23_2574881-2577872 AUGUSTUS transcript 597 2392 0.83 + . g241.t1 scaffold_23_2574881-2577872 AUGUSTUS start_codon 597 599 . + 0 transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS intron 656 1124 0.83 + . transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS intron 1382 1684 1 + . transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS intron 1919 2192 1 + . transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS CDS 597 655 0.83 + 0 transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS CDS 1125 1381 1 + 1 transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS CDS 1685 1918 1 + 2 transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS CDS 2193 2392 1 + 2 transcript_id "g241.t1"; gene_id "g241"; scaffold_23_2574881-2577872 AUGUSTUS stop_codon 2390 2392 . + 0 transcript_id "g241.t1"; gene_id "g241"; # protein sequence = [MNEDTIWKDRARPEIQNRCRKHKSLGPPTKTSSQPRRNIVGCRIQHIWKEGSSASSSVWKGSVLDQVPVNPSLYLIKY # DGFDCVYGLELNKDERVQNLEVLPDPHANSRINDVSLADTMIGKAVEHVFETEDGTKDEWRGMVLARAPVMTTWFYITYEKDPVLYMYQLLDDYKEGD # LRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS] # end gene g241 ### # # ----- sequence number 233 (length = 4934, name = scaffold_23_4115977-4120910) ----- # # annotation: # Sequence scaffold_23_4115977-4120910 length=4934 scaffold_23_4115977-4120910 database start_codon 601 603 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 931 1055 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 1170 1347 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 1447 1535 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 1608 1733 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 1821 1909 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 2071 2249 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 2330 2431 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 2505 2635 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 2712 2787 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 2936 3175 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 3255 3336 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 3446 3605 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 3715 3858 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database intron 3988 4224 . + . transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 601 930 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 1056 1169 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 1348 1446 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 1536 1607 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 1734 1820 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 1910 2070 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 2250 2329 . + 1 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 2432 2504 . + 2 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 2636 2711 . + 1 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 2788 2935 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 3176 3254 . + 2 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 3337 3445 . + 1 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 3606 3714 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 3859 3987 . + 2 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database CDS 4225 4334 . + 2 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; scaffold_23_4115977-4120910 database stop_codon 4332 4334 . + 0 transcript_id "g_1607-T1.1"; gene_id "g_1607-T1"; # Predicted genes for sequence number 233 on both strands # start gene g242 scaffold_23_4115977-4120910 AUGUSTUS gene 601 4334 0.14 + . g242 scaffold_23_4115977-4120910 AUGUSTUS transcript 601 4334 0.14 + . g242.t1 scaffold_23_4115977-4120910 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 931 1055 0.8 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 1170 1535 0.47 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 1608 1733 0.95 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 1821 1909 0.98 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 2071 2249 0.96 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 2330 2431 0.51 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 2505 2668 0.5 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 2712 2787 0.99 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 2936 3175 0.99 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 3255 3336 0.99 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 3446 3605 0.91 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 3715 3858 1 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS intron 3988 4224 0.99 + . transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 601 930 0.86 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 1056 1169 0.8 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 1536 1607 0.97 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 1734 1820 0.95 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 1910 2070 1 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 2250 2329 0.96 + 1 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 2432 2504 0.5 + 2 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 2669 2711 0.52 + 1 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 2788 2935 0.99 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 3176 3254 0.99 + 2 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 3337 3445 1 + 1 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 3606 3714 0.91 + 0 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 3859 3987 0.99 + 2 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS CDS 4225 4334 0.98 + 2 transcript_id "g242.t1"; gene_id "g242"; scaffold_23_4115977-4120910 AUGUSTUS stop_codon 4332 4334 . + 0 transcript_id "g242.t1"; gene_id "g242"; # protein sequence = [MARNDSSQMKDIMNHDQGHSPPECNQSASGSNSDSGGTNLIDLNTDVTPSSYWKPEATEERGKKTDEEGKESRAEKGT # SCCPLSELNQVHDDCTPQTPLTFSRTHCVLIDINAFKERNKISSQEGRHFWNNNFVKLPCWPESTMSVKKKAIKKYNPKYKEQWSFDGLRSFVERVHP # AENFYPSLFPKIAKLATKLPSYVKKAIPLLKRGHSSSLTLSQGQIACLLANAFFCTYPHRNSTQPQAEYSNYPTINFNSLFGGKPERKREKLRAILHY # FSVVTDKSKSLDGLVTFERRFLTPHQEPAWRSSEGTIEVDGKGMLQVDFACNLVGGGVLGAGLVQEEILFLMNPELIVSRLFTEKLSDQECLIITGSQ # MFSSYRGYSDKFEWTGPYEDLTKRDSWGRLHRQILAIDAQHFRYPTQQYHMSSINRELNKAYCGFQRGANNPSRKVPDIATGKWGCGAFNGDPKLKAL # IQLMAAAETERGLAFFTFKDAEMARELQEVYHLLVTQSTTVGKLYKTLQNYCEVNQNTPVDVFQFVKNTLGETRSQL] # end gene g242 ### # # ----- sequence number 234 (length = 3846, name = scaffold_23_5306674-5310519) ----- # # annotation: # Sequence scaffold_23_5306674-5310519 length=3846 scaffold_23_5306674-5310519 database start_codon 601 603 . + 0 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database intron 654 1600 . + . transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database intron 1803 1899 . + . transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database intron 2017 2951 . + . transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database intron 3011 3098 . + . transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database CDS 601 653 . + 0 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database CDS 1601 1802 . + 1 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database CDS 1900 2016 . + 0 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database CDS 2952 3010 . + 0 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database CDS 3099 3246 . + 1 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; scaffold_23_5306674-5310519 database stop_codon 3244 3246 . + 0 transcript_id "g_1615-T1.1"; gene_id "g_1615-T1"; # Predicted genes for sequence number 234 on both strands # start gene g243 scaffold_23_5306674-5310519 AUGUSTUS gene 601 3246 0.7 + . g243 scaffold_23_5306674-5310519 AUGUSTUS transcript 601 3246 0.7 + . g243.t1 scaffold_23_5306674-5310519 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS intron 654 1600 0.99 + . transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS intron 1803 1899 0.99 + . transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS intron 2017 2951 0.98 + . transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS intron 3011 3098 0.98 + . transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS CDS 601 653 0.99 + 0 transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS CDS 1601 1802 1 + 1 transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS CDS 1900 2016 0.99 + 0 transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS CDS 2952 3010 0.98 + 0 transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS CDS 3099 3246 0.72 + 1 transcript_id "g243.t1"; gene_id "g243"; scaffold_23_5306674-5310519 AUGUSTUS stop_codon 3244 3246 . + 0 transcript_id "g243.t1"; gene_id "g243"; # protein sequence = [MAGRSDDESVSNSSGESSNSDDESGSGSGSGSASGSSSSSSSSSSQSGSSDSGSGSDSGSQSDSDSEKSKEKNEHQNK # ANIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQSSSNSGSDEDSSSSDDSDDDSSGSRKKRKSGSSSDSESVSGSGSGSDSSPQEEERSDETVS # DYEPSHKVKSRKPLTK] # end gene g243 ### # # ----- sequence number 235 (length = 2047, name = scaffold_23_5583513-5585559) ----- # # annotation: # Sequence scaffold_23_5583513-5585559 length=2047 scaffold_23_5583513-5585559 database start_codon 601 603 . + 0 transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; scaffold_23_5583513-5585559 database intron 721 1053 . + . transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; scaffold_23_5583513-5585559 database intron 1159 1282 . + . transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; scaffold_23_5583513-5585559 database CDS 601 720 . + 0 transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; scaffold_23_5583513-5585559 database CDS 1054 1158 . + 0 transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; scaffold_23_5583513-5585559 database CDS 1283 1447 . + 0 transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; scaffold_23_5583513-5585559 database stop_codon 1445 1447 . + 0 transcript_id "g_1618-T1.1"; gene_id "g_1618-T1"; # Predicted genes for sequence number 235 on both strands # start gene g244 scaffold_23_5583513-5585559 AUGUSTUS gene 601 1447 0.48 + . g244 scaffold_23_5583513-5585559 AUGUSTUS transcript 601 1447 0.48 + . g244.t1 scaffold_23_5583513-5585559 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g244.t1"; gene_id "g244"; scaffold_23_5583513-5585559 AUGUSTUS intron 721 1053 0.54 + . transcript_id "g244.t1"; gene_id "g244"; scaffold_23_5583513-5585559 AUGUSTUS intron 1159 1282 0.52 + . transcript_id "g244.t1"; gene_id "g244"; scaffold_23_5583513-5585559 AUGUSTUS CDS 601 720 0.52 + 0 transcript_id "g244.t1"; gene_id "g244"; scaffold_23_5583513-5585559 AUGUSTUS CDS 1054 1158 0.54 + 0 transcript_id "g244.t1"; gene_id "g244"; scaffold_23_5583513-5585559 AUGUSTUS CDS 1283 1447 0.54 + 0 transcript_id "g244.t1"; gene_id "g244"; scaffold_23_5583513-5585559 AUGUSTUS stop_codon 1445 1447 . + 0 transcript_id "g244.t1"; gene_id "g244"; # protein sequence = [MRPHEGLMMIQELDDRLKEQIDKLEHVRFSTTELKDNLSGSTDELHQSIENHLNWLHQLFERLDNIQMNTTVFVQTNP # KARMWGRKQGPRDATLWAGLQLADNDHSENGWNSFLTRRNSDAASEMSCAW] # end gene g244 ### # # ----- sequence number 236 (length = 3537, name = scaffold_23_10019852-10023388) ----- # # annotation: # Sequence scaffold_23_10019852-10023388 length=3537 scaffold_23_10019852-10023388 database start_codon 601 603 . + 0 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database intron 758 870 . + . transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database intron 977 1400 . + . transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database intron 1514 1966 . + . transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database intron 2096 2788 . + . transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database CDS 601 757 . + 0 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database CDS 871 976 . + 2 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database CDS 1401 1513 . + 1 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database CDS 1967 2095 . + 2 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database CDS 2789 2937 . + 2 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; scaffold_23_10019852-10023388 database stop_codon 2935 2937 . + 0 transcript_id "g_1645-T1.1"; gene_id "g_1645-T1"; # Predicted genes for sequence number 236 on both strands # start gene g245 scaffold_23_10019852-10023388 AUGUSTUS gene 601 2937 0.68 + . g245 scaffold_23_10019852-10023388 AUGUSTUS transcript 601 2937 0.68 + . g245.t1 scaffold_23_10019852-10023388 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS intron 758 870 1 + . transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS intron 977 1400 1 + . transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS intron 1514 1966 1 + . transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS intron 2061 2116 1 + . transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS intron 2494 2788 0.77 + . transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS CDS 601 757 0.9 + 0 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS CDS 871 976 1 + 2 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS CDS 1401 1513 1 + 1 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS CDS 1967 2060 1 + 2 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS CDS 2117 2493 0.77 + 1 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS CDS 2789 2937 0.8 + 2 transcript_id "g245.t1"; gene_id "g245"; scaffold_23_10019852-10023388 AUGUSTUS stop_codon 2935 2937 . + 0 transcript_id "g245.t1"; gene_id "g245"; # protein sequence = [MAQETNQSQVPMLCTTGCGFYGNPRTSGMCSVCYKEHLTRQNNGGVSPLSAMGGSASSSPTAEAAAFQRIEATLNNAV # AAAAAAEAASGAAAAAAASLPVTQQMTEMSISCEDEASSPAAELAGPVVTQPTASASPPGGSGSEEPSSLEPPKPKKNSCPCCPASTAPDAPLLLPLM # PCLTYPAPAALPPLPCLCYPASTAPPHLPRLAALPLLPLLPRLCYPASTALPPLPCLTYPASAASTILPLLPRLCYPASAILPLLPVQHNPQGTHLSL # PLQVRQNCRFDCRCGNLFCGLHRYSDKHSCPYDYKAEAAAKIRKENPVVVADKIQRI] # end gene g245 ### # # ----- sequence number 237 (length = 4113, name = scaffold_24_444318-448430) ----- # # annotation: # Sequence scaffold_24_444318-448430 length=4113 scaffold_24_444318-448430 database start_codon 601 603 . + 0 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database intron 776 1207 . + . transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database intron 1295 1429 . + . transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database intron 1586 2231 . + . transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database intron 2421 2823 . + . transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database intron 2970 3264 . + . transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database CDS 601 775 . + 0 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database CDS 1208 1294 . + 2 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database CDS 1430 1585 . + 2 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database CDS 2232 2420 . + 2 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database CDS 2824 2969 . + 2 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database CDS 3265 3513 . + 0 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; scaffold_24_444318-448430 database stop_codon 3511 3513 . + 0 transcript_id "g_1659-T1.1"; gene_id "g_1659-T1"; # Predicted genes for sequence number 237 on both strands # start gene g246 scaffold_24_444318-448430 AUGUSTUS gene 601 3513 0.1 + . g246 scaffold_24_444318-448430 AUGUSTUS transcript 601 3513 0.1 + . g246.t1 scaffold_24_444318-448430 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS intron 776 1207 0.99 + . transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS intron 1295 1429 0.51 + . transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS intron 1766 2231 0.51 + . transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS intron 2421 2823 1 + . transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS intron 2970 3264 0.69 + . transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS CDS 601 775 0.73 + 0 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS CDS 1208 1294 0.51 + 2 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS CDS 1430 1765 0.51 + 2 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS CDS 2232 2420 0.99 + 2 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS CDS 2824 2969 0.7 + 2 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS CDS 3265 3513 0.99 + 0 transcript_id "g246.t1"; gene_id "g246"; scaffold_24_444318-448430 AUGUSTUS stop_codon 3511 3513 . + 0 transcript_id "g246.t1"; gene_id "g246"; # protein sequence = [MNLAPGEVVEAVSPQPNLQEVLFVMGGRSLEDSDDEEEDEDRDPRLMPRNCGFYNTKTKQWHQLADFPNYNKWGYSIV # SLNNDVYVTGGSRGSQTNTWSTTETWRYTTREGGWAKVAPMLRARTNHTSATLNGEIYVIGGERMNRILDVIGGDRMKRILDVIGGERMKRILDVIGG # ERMDRILDVIGGERMNRILDVIGGTTLDYVEVEHYDPYTDSWGLICPALRYVTNFTATACHGKLYLIGSCAVKYNALTMQCYNPVIDAWSVICSPFIP # KYLSSPRSVSVDGLIYLIADNTKKVYVYDPEANIWQKVQFLHMLHENGGLVVLDGRLFVTGGHWKGMEGDYGVEVESYDRTSNSWQVESFLPRLWFYS # GVCSVFLDPAQWPEPFPVDEE] # end gene g246 ### # # ----- sequence number 238 (length = 2137, name = scaffold_24_4280168-4282304) ----- # # annotation: # Sequence scaffold_24_4280168-4282304 length=2137 scaffold_24_4280168-4282304 database start_codon 601 603 . + 0 transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database intron 629 985 . + . transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database intron 1029 1130 . + . transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database intron 1246 1393 . + . transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database CDS 601 628 . + 0 transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database CDS 986 1028 . + 2 transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database CDS 1131 1245 . + 1 transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database CDS 1394 1537 . + 0 transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; scaffold_24_4280168-4282304 database stop_codon 1535 1537 . + 0 transcript_id "g_1671-T1.1"; gene_id "g_1671-T1"; # Predicted genes for sequence number 238 on both strands # (none) # # ----- sequence number 239 (length = 2585, name = scaffold_24_6040170-6042754) ----- # # annotation: # Sequence scaffold_24_6040170-6042754 length=2585 scaffold_24_6040170-6042754 database start_codon 601 603 . + 0 transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; scaffold_24_6040170-6042754 database intron 1391 1655 . + . transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; scaffold_24_6040170-6042754 database intron 1773 1878 . + . transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; scaffold_24_6040170-6042754 database CDS 601 1390 . + 0 transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; scaffold_24_6040170-6042754 database CDS 1656 1772 . + 2 transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; scaffold_24_6040170-6042754 database CDS 1879 1985 . + 2 transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; scaffold_24_6040170-6042754 database stop_codon 1983 1985 . + 0 transcript_id "g_1680-T1.1"; gene_id "g_1680-T1"; # Predicted genes for sequence number 239 on both strands # (none) # # ----- sequence number 240 (length = 4003, name = scaffold_24_6533238-6537240) ----- # # annotation: # Sequence scaffold_24_6533238-6537240 length=4003 scaffold_24_6533238-6537240 database start_codon 601 603 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 725 1116 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 1178 1320 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 1382 2299 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 2378 2464 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 2555 2804 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 2871 3089 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database intron 3141 3313 . + . transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 601 724 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 1117 1177 . + 2 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 1321 1381 . + 1 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 2300 2377 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 2465 2554 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 2805 2870 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 3090 3140 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database CDS 3314 3403 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; scaffold_24_6533238-6537240 database stop_codon 3401 3403 . + 0 transcript_id "g_1687-T1.1"; gene_id "g_1687-T1"; # Predicted genes for sequence number 240 on both strands # start gene g247 scaffold_24_6533238-6537240 AUGUSTUS gene 1 3403 0.7 + . g247 scaffold_24_6533238-6537240 AUGUSTUS transcript 1 3403 0.7 + . g247.t1 scaffold_24_6533238-6537240 AUGUSTUS intron 1 1116 0.72 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS intron 1178 1320 0.99 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS intron 1382 2299 0.97 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS intron 2378 2464 1 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS intron 2555 2804 1 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS intron 2871 3089 1 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS intron 3141 3313 1 + . transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 1117 1177 0.98 + 2 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 1321 1381 0.99 + 1 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 2300 2377 1 + 0 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 2465 2554 1 + 0 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 2805 2870 1 + 0 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 3090 3140 1 + 0 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS CDS 3314 3403 1 + 0 transcript_id "g247.t1"; gene_id "g247"; scaffold_24_6533238-6537240 AUGUSTUS stop_codon 3401 3403 . + 0 transcript_id "g247.t1"; gene_id "g247"; # protein sequence = [IDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLG # NKCDVNDKRQVSKDKGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNSPQGSSQGVKITEQPKKSSFFRCSLL] # end gene g247 ### # # ----- sequence number 241 (length = 2113, name = scaffold_25_100492-102604) ----- # # annotation: # Sequence scaffold_25_100492-102604 length=2113 scaffold_25_100492-102604 database start_codon 601 603 . + 0 transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database intron 630 995 . + . transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database intron 1153 1225 . + . transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database intron 1278 1415 . + . transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database CDS 601 629 . + 0 transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database CDS 996 1152 . + 1 transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database CDS 1226 1277 . + 0 transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database CDS 1416 1513 . + 2 transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; scaffold_25_100492-102604 database stop_codon 1511 1513 . + 0 transcript_id "g_1714-T1.1"; gene_id "g_1714-T1"; # Predicted genes for sequence number 241 on both strands # start gene g248 scaffold_25_100492-102604 AUGUSTUS gene 601 1513 0.96 + . g248 scaffold_25_100492-102604 AUGUSTUS transcript 601 1513 0.96 + . g248.t1 scaffold_25_100492-102604 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS intron 630 995 0.96 + . transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS intron 1153 1225 1 + . transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS intron 1278 1415 1 + . transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS CDS 601 629 0.96 + 0 transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS CDS 996 1152 1 + 1 transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS CDS 1226 1277 1 + 0 transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS CDS 1416 1513 1 + 2 transcript_id "g248.t1"; gene_id "g248"; scaffold_25_100492-102604 AUGUSTUS stop_codon 1511 1513 . + 0 transcript_id "g248.t1"; gene_id "g248"; # protein sequence = [MAAKLLPVVKLATKVTIAGGAVYVAYDSGLLGGSAQGSEVLSKAKAAIPPAVDEWMKYFGLELPAIPKVAFAPVESWN # SGVRASISFLSLAPTRAGDISSQSVQYLKNLTK] # end gene g248 ### # # ----- sequence number 242 (length = 8819, name = scaffold_25_3717729-3726547) ----- # # annotation: # Sequence scaffold_25_3717729-3726547 length=8819 scaffold_25_3717729-3726547 database start_codon 601 603 . + 0 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 747 2604 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 2726 3013 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 3044 3165 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 3283 3396 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 3444 4576 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 4672 5655 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 5755 6982 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 7233 7433 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 7571 7994 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database intron 8065 8176 . + . transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 601 746 . + 0 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 2605 2725 . + 1 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 3014 3043 . + 0 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 3166 3282 . + 0 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 3397 3443 . + 0 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 4577 4671 . + 1 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 5656 5754 . + 2 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 6983 7232 . + 2 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 7434 7570 . + 1 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 7995 8064 . + 2 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database CDS 8177 8219 . + 1 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; scaffold_25_3717729-3726547 database stop_codon 8217 8219 . + 0 transcript_id "g_1726-T1.1"; gene_id "g_1726-T1"; # Predicted genes for sequence number 242 on both strands # start gene g249 scaffold_25_3717729-3726547 AUGUSTUS gene 1752 8219 0.74 + . g249 scaffold_25_3717729-3726547 AUGUSTUS transcript 1752 8219 0.74 + . g249.t1 scaffold_25_3717729-3726547 AUGUSTUS start_codon 1752 1754 . + 0 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 1877 2604 0.99 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 2726 3013 0.86 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 3044 3165 0.86 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 3283 3396 1 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 3444 4576 0.99 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 4672 5655 0.99 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 5755 6982 1 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 7233 7433 1 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 7571 7994 1 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS intron 8065 8176 1 + . transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 1752 1876 0.9 + 0 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 2605 2725 1 + 1 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 3014 3043 0.86 + 0 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 3166 3282 1 + 0 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 3397 3443 1 + 0 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 4577 4671 1 + 1 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 5656 5754 0.99 + 2 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 6983 7232 1 + 2 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 7434 7570 1 + 1 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 7995 8064 1 + 2 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS CDS 8177 8219 1 + 1 transcript_id "g249.t1"; gene_id "g249"; scaffold_25_3717729-3726547 AUGUSTUS stop_codon 8217 8219 . + 0 transcript_id "g249.t1"; gene_id "g249"; # protein sequence = [MCHSHRINANAKCLKVKWEMLSPGLQGNVSPGKSVLSVKDLRETVQANCVRWKKKFSFPCKMSASAGTGVLDPCVCRV # SVRKELKGGKTYAKLGFADLNLAEFAGSGNTTRRCLLEGYDTKNTRQDNSILKVLISTQLMSGDPCFKTPPSTATVIGVQGDAERLLEERKGGDSQKA # FLESREGRCASLPDELVGCGHSRTSSYASQQSKVSGYSTGHSRSSSLSECSHRRNTSVGSASTGIGSIPEPSEEKEVRAGGPPTAGASACTAVPEHPA # AVPGTPDALVRSASSCERLNRHPVKQDSMESQLKRVDATRVDADDVVEKILQSQDFTPSLLDSSAEEEGLRLFVGPGGSTALGSHHLPTRVGGGAYEQ # VVMKR] # end gene g249 ### # # ----- sequence number 243 (length = 3923, name = scaffold_25_5620953-5624875) ----- # # annotation: # Sequence scaffold_25_5620953-5624875 length=3923 scaffold_25_5620953-5624875 database start_codon 601 603 . + 0 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database intron 786 1061 . + . transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database intron 1143 1233 . + . transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database intron 1341 1542 . + . transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database intron 2848 2994 . + . transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database CDS 601 785 . + 0 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database CDS 1062 1142 . + 1 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database CDS 1234 1340 . + 1 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database CDS 1543 2847 . + 2 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database CDS 2995 3323 . + 2 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; scaffold_25_5620953-5624875 database stop_codon 3321 3323 . + 0 transcript_id "g_1736-T1.1"; gene_id "g_1736-T1"; # Predicted genes for sequence number 243 on both strands # start gene g250 scaffold_25_5620953-5624875 AUGUSTUS gene 601 3323 0.51 + . g250 scaffold_25_5620953-5624875 AUGUSTUS transcript 601 3323 0.51 + . g250.t1 scaffold_25_5620953-5624875 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS intron 786 1061 0.69 + . transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS intron 1143 1233 0.7 + . transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS intron 1341 1542 0.95 + . transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS intron 2848 2994 1 + . transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS CDS 601 785 0.74 + 0 transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS CDS 1062 1142 0.7 + 1 transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS CDS 1234 1340 1 + 1 transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS CDS 1543 2847 1 + 2 transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS CDS 2995 3323 1 + 2 transcript_id "g250.t1"; gene_id "g250"; scaffold_25_5620953-5624875 AUGUSTUS stop_codon 3321 3323 . + 0 transcript_id "g250.t1"; gene_id "g250"; # protein sequence = [MANLLSLQFSASLRKYGSLKPLRTATTLPIDKRRYSSKDESTSEYLHKSIVPSMHYQKSLPRLPIPKLEDTVKRYLAA # QRPLLDDDQFSQTEKLAKDFQSGVGNQLHKDLVAQDKQNKHTSYISAPWFDMYLSARDSVVLNFNPFMSFNLDPKTEYNNQLVRSTNMVCSAVRFMKT # LRAGYLEPEVFHLNPAKSDTDGFKKLIRWVPSSLSWYGAYMVNAYPLDMSQYFRLFNSTRIPKKGRDELFTEPKGRHLLVIRKGHMYVFDVVDPNGNL # VKPAEIQSHLKYILSDQTPPPAHPLGFLTSENRDVWAGLREKLLAAGNGEAMGSVDSALFCLCLDDEDMRDHIHTSHNMLHGDGSNRWFDKSFSVILA # KDGQAAINFEHSWGDGVAVLRFQNEIFKDSTERPLVHPGSSPTGADSASAVRRLQFNLDGELEEGIAKAKENFLSAVSKLTIDAMEFKKGGKEQLKKK # KLSPDAVAQLAFQMGFLRQYGKTVASYESCSTAAFRHGRTETIRPATVHTQRCAHAFVGQPGKHSVEELQGMLAECSKYHGQLTREAAMGQGFDRHLF # AMKYLANSKGQPLHALYQDPAYTAINHNILSTSTLTSPAVSLGGFAPVVPDGFGVGYGVHDDWIGCNVSSYPDRNVHEFLQCVHKSLEDIFTVLEGTP # LS] # end gene g250 ### # # ----- sequence number 244 (length = 2412, name = scaffold_25_9051892-9054303) ----- # # annotation: # Sequence scaffold_25_9051892-9054303 length=2412 scaffold_25_9051892-9054303 database start_codon 195 197 . + 0 transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; scaffold_25_9051892-9054303 database intron 372 645 . + . transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; scaffold_25_9051892-9054303 database intron 722 1690 . + . transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; scaffold_25_9051892-9054303 database CDS 195 371 . + 0 transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; scaffold_25_9051892-9054303 database CDS 646 721 . + 0 transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; scaffold_25_9051892-9054303 database CDS 1691 1812 . + 2 transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; scaffold_25_9051892-9054303 database stop_codon 1810 1812 . + 0 transcript_id "g_1753-T1.1"; gene_id "g_1753-T1"; # Predicted genes for sequence number 244 on both strands # start gene g251 scaffold_25_9051892-9054303 AUGUSTUS gene 195 1812 0.82 + . g251 scaffold_25_9051892-9054303 AUGUSTUS transcript 195 1812 0.82 + . g251.t1 scaffold_25_9051892-9054303 AUGUSTUS start_codon 195 197 . + 0 transcript_id "g251.t1"; gene_id "g251"; scaffold_25_9051892-9054303 AUGUSTUS intron 372 645 0.83 + . transcript_id "g251.t1"; gene_id "g251"; scaffold_25_9051892-9054303 AUGUSTUS intron 722 1690 0.97 + . transcript_id "g251.t1"; gene_id "g251"; scaffold_25_9051892-9054303 AUGUSTUS CDS 195 371 0.92 + 0 transcript_id "g251.t1"; gene_id "g251"; scaffold_25_9051892-9054303 AUGUSTUS CDS 646 721 0.94 + 0 transcript_id "g251.t1"; gene_id "g251"; scaffold_25_9051892-9054303 AUGUSTUS CDS 1691 1812 1 + 2 transcript_id "g251.t1"; gene_id "g251"; scaffold_25_9051892-9054303 AUGUSTUS stop_codon 1810 1812 . + 0 transcript_id "g251.t1"; gene_id "g251"; # protein sequence = [MSSAENGAGGDSITVHNFSEKISEQTVHFHVMKLNGGFFLWVGSSPVLSNLAVSMNSKYDSMPLSSLVLGDASDMTPN # SLAQRLAKKTKKQVFVSYNLPATNSNLSMLVENRIKKELEDHPDRF] # end gene g251 ### # # ----- sequence number 245 (length = 3433, name = scaffold_26_4108322-4111754) ----- # # annotation: # Sequence scaffold_26_4108322-4111754 length=3433 scaffold_26_4108322-4111754 database start_codon 601 603 . + 0 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database intron 1088 1278 . + . transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database intron 1456 1981 . + . transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database intron 2088 2207 . + . transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database intron 2306 2397 . + . transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database CDS 601 1087 . + 0 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database CDS 1279 1455 . + 2 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database CDS 1982 2087 . + 2 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database CDS 2208 2305 . + 1 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database CDS 2398 2918 . + 2 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; scaffold_26_4108322-4111754 database stop_codon 2916 2918 . + 0 transcript_id "g_1775-T1.1"; gene_id "g_1775-T1"; # Predicted genes for sequence number 245 on both strands # start gene g252 scaffold_26_4108322-4111754 AUGUSTUS gene 271 2918 0.86 + . g252 scaffold_26_4108322-4111754 AUGUSTUS transcript 271 2918 0.86 + . g252.t1 scaffold_26_4108322-4111754 AUGUSTUS start_codon 271 273 . + 0 transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS intron 1088 1278 1 + . transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS intron 1456 1981 1 + . transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS intron 2088 2207 1 + . transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS intron 2306 2397 1 + . transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS CDS 271 1087 0.86 + 0 transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS CDS 1279 1455 1 + 2 transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS CDS 1982 2087 1 + 2 transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS CDS 2208 2305 1 + 1 transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS CDS 2398 2918 1 + 2 transcript_id "g252.t1"; gene_id "g252"; scaffold_26_4108322-4111754 AUGUSTUS stop_codon 2916 2918 . + 0 transcript_id "g252.t1"; gene_id "g252"; # protein sequence = [MEIPNFGSSVLGSLNEQRLLGQYCDVAILVNGQAFKAHRAVLAASSLYFRDLFSSNSQSLFELPSSVTPACFQQILSF # CYTGRLSMAPCEQLVLMYTAGYLQIQNIVERGMELMLKTSSPHCDSQTTSADDLGLDAQPCSPSHLPSGLGSAEALLACGRIKQERCDTPLEEEQKEQ # GGGPGAEGGGSQRAESRGSEGNATRSSALCYSGVASGLQSYPTASGERSSPGGSSLPATDSPGSHPLDEEFEEDFYGSSTPGIFGQIYGHPPNPYSMQ # EKVEMLSLPLATERRPCVLIGRDTMALPASLISQIGYRCHPTLYTEGDPGEKVELVGGSGVYMTRGQLMNCHLCAGIKHKVLLRRLLATFFDRNTLAN # SCGTGIRSSTNDPSRKPLDNRVLNTVKLYCQNFAPNFKESEMNVIAADMCTNARRVRKRWLPKIQSLLPDKTHRRGQSKTGGASAPAPAPTQAGAVSA # LDLEPRHLSQAYLPLDAHLYAERREALLPHLQFLSSRGAHEGADPEREGVGQAGHGTEAHLTEALPAQSLSPHQGSSPHLTEQQEEEETGEETGEEPQ # EDSQ] # end gene g252 ### # # ----- sequence number 246 (length = 2483, name = scaffold_26_5293408-5295890) ----- # # annotation: # Sequence scaffold_26_5293408-5295890 length=2483 scaffold_26_5293408-5295890 database start_codon 601 603 . + 0 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database intron 711 818 . + . transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database intron 980 1158 . + . transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database intron 1260 1348 . + . transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database intron 1490 1802 . + . transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database CDS 601 710 . + 0 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database CDS 819 979 . + 1 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database CDS 1159 1259 . + 2 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database CDS 1349 1489 . + 0 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database CDS 1803 1883 . + 0 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; scaffold_26_5293408-5295890 database stop_codon 1881 1883 . + 0 transcript_id "g_1787-T1.1"; gene_id "g_1787-T1"; # Predicted genes for sequence number 246 on both strands # start gene g253 scaffold_26_5293408-5295890 AUGUSTUS gene 601 1883 0.51 + . g253 scaffold_26_5293408-5295890 AUGUSTUS transcript 601 1883 0.51 + . g253.t1 scaffold_26_5293408-5295890 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS intron 711 818 0.69 + . transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS intron 980 1158 0.93 + . transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS intron 1260 1348 1 + . transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS intron 1490 1802 0.85 + . transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS CDS 601 710 0.63 + 0 transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS CDS 819 979 0.93 + 1 transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS CDS 1159 1259 1 + 2 transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS CDS 1349 1489 0.86 + 0 transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS CDS 1803 1883 0.85 + 0 transcript_id "g253.t1"; gene_id "g253"; scaffold_26_5293408-5295890 AUGUSTUS stop_codon 1881 1883 . + 0 transcript_id "g253.t1"; gene_id "g253"; # protein sequence = [MDGSPGVYDDQTDSTKQQERHYFLLSELQTLVKDLPSSFQQRLSYTTLSDLALALIDGTVYEIVQGLLDIQHLTERNL # YNQRQKLHSEHRGLKQDLTRKHKDALQVCKSHNMAVLKANQQGETEALDIRVREEQRMMDEKIVAEMDQKVIDQQNTLEKAGVPGFYITTNPQELTMQ # MNLLELILKLQQKESQSGSAS] # end gene g253 ### # # ----- sequence number 247 (length = 2181, name = scaffold_26_5489475-5491655) ----- # # annotation: # Sequence scaffold_26_5489475-5491655 length=2181 scaffold_26_5489475-5491655 database start_codon 601 603 . + 0 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database intron 673 758 . + . transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database intron 874 1096 . + . transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database intron 1231 1339 . + . transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database intron 1409 1503 . + . transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database CDS 601 672 . + 0 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database CDS 759 873 . + 0 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database CDS 1097 1230 . + 2 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database CDS 1340 1408 . + 0 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database CDS 1504 1581 . + 0 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; scaffold_26_5489475-5491655 database stop_codon 1579 1581 . + 0 transcript_id "g_1790-T1.1"; gene_id "g_1790-T1"; # Predicted genes for sequence number 247 on both strands # start gene g254 scaffold_26_5489475-5491655 AUGUSTUS gene 1 1581 0.54 + . g254 scaffold_26_5489475-5491655 AUGUSTUS transcript 1 1581 0.54 + . g254.t1 scaffold_26_5489475-5491655 AUGUSTUS intron 1 222 0.99 + . transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS intron 458 578 1 + . transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS intron 673 758 1 + . transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS intron 874 1096 0.54 + . transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS intron 1231 1339 1 + . transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS intron 1409 1503 1 + . transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS CDS 223 457 0.99 + 2 transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS CDS 579 672 1 + 1 transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS CDS 759 873 1 + 0 transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS CDS 1097 1230 0.54 + 2 transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS CDS 1340 1408 1 + 0 transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS CDS 1504 1581 1 + 0 transcript_id "g254.t1"; gene_id "g254"; scaffold_26_5489475-5491655 AUGUSTUS stop_codon 1579 1581 . + 0 transcript_id "g254.t1"; gene_id "g254"; # protein sequence = [GLVLTRDITNTFDVPVNRIGKAPQEIQEFLAWQRDLESDRKTTAQARPTVFRWTGAGKEVFVSGSFNNWATKIPLNKS # QNNFVAIMDLPEGEHQYKFCVDGQWTLDPTGAVITTKTGTVNNVIQVKRTDFEVFDALTIDSKACADMSDLSSSPPGPYLQDSYVTKTEDKLKSPPIL # PPHLLQVLLNKDTGVSCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI] # end gene g254 ### # # ----- sequence number 248 (length = 8212, name = scaffold_26_5976478-5984689) ----- # # annotation: # Sequence scaffold_26_5976478-5984689 length=8212 scaffold_26_5976478-5984689 database start_codon 601 603 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 664 1175 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 1318 2246 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 2376 4201 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 4336 4684 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 4778 5800 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 5864 6376 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 6401 6513 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 6604 6694 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 6796 7035 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database intron 7250 7504 . + . transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 601 663 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 1176 1317 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 2247 2375 . + 2 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 4202 4335 . + 2 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 4685 4777 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 5801 5863 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 6377 6400 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 6514 6603 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 6695 6795 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 7036 7249 . + 1 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database CDS 7505 7612 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; scaffold_26_5976478-5984689 database stop_codon 7610 7612 . + 0 transcript_id "g_1800-T1.1"; gene_id "g_1800-T1"; # Predicted genes for sequence number 248 on both strands # start gene g255 scaffold_26_5976478-5984689 AUGUSTUS gene 601 7612 0.12 + . g255 scaffold_26_5976478-5984689 AUGUSTUS transcript 601 7612 0.12 + . g255.t1 scaffold_26_5976478-5984689 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 664 1175 0.63 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 1318 2246 0.8 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 2376 2789 0.86 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 2937 4201 0.59 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 4336 4684 1 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 4778 5800 0.72 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 5864 6376 0.58 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 6401 6513 0.66 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 6604 6694 1 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 6796 6910 0.98 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 6926 7035 0.98 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS intron 7250 7504 1 + . transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 601 663 0.61 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 1176 1317 1 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 2247 2375 0.93 + 2 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 2790 2936 0.57 + 2 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 4202 4335 0.96 + 2 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 4685 4777 0.99 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 5801 5863 0.74 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 6377 6400 0.58 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 6514 6603 1 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 6695 6795 1 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 6911 6925 0.98 + 1 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 7036 7249 1 + 1 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS CDS 7505 7612 1 + 0 transcript_id "g255.t1"; gene_id "g255"; scaffold_26_5976478-5984689 AUGUSTUS stop_codon 7610 7612 . + 0 transcript_id "g255.t1"; gene_id "g255"; # protein sequence = [MDFNVRKIASDAGVFFTRAVQFTEEKLGQAEKTELDAHFENLLSRADCTKNWTEKIFRQTEVLLQPNPSARIEEFLYE # KLDRKAPSRLTNAELLGHYMLDAAKDFGPGTPYEARLQDQYCSVPAGLSCSLIAALTGPERQNDSGPAHDFQGCPVLVWRWPRSTLIKVGDCERRLGG # AEREFLQTSAISFLTPLRNFLEGDWRTISKERRLLENRRLDLDVCKARLKKAKTAEAKAAAVPDFQDTRARNYVLSASASALWSEEVDKAEHDLRVAQ # TEFDRQAEVTRLLLEGISSTHVNHLRCLHEFVEAQAAYYKQCHLHMLDLQKDLSSSNGDVFPNAFAANPGLPASPAGSPLDVGGPDGGCAAEVDTLKI # EEVQAPATGTRKAKVLYDYDAADTSELSLLADELITVYTVPGMDSDWLIGERGNQKGKVPVTYLELLS] # end gene g255 ### # # ----- sequence number 249 (length = 2612, name = scaffold_26_6022217-6024828) ----- # # annotation: # Sequence scaffold_26_6022217-6024828 length=2612 scaffold_26_6022217-6024828 database start_codon 601 603 . + 0 transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database intron 604 1270 . + . transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database intron 1408 1658 . + . transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database intron 1741 1862 . + . transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database CDS 601 603 . + 0 transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database CDS 1271 1407 . + 0 transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database CDS 1659 1740 . + 1 transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database CDS 1863 2012 . + 0 transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; scaffold_26_6022217-6024828 database stop_codon 2010 2012 . + 0 transcript_id "g_1802-T1.1"; gene_id "g_1802-T1"; # Predicted genes for sequence number 249 on both strands # start gene g256 scaffold_26_6022217-6024828 AUGUSTUS gene 1 2012 0.46 + . g256 scaffold_26_6022217-6024828 AUGUSTUS transcript 1 2012 0.46 + . g256.t1 scaffold_26_6022217-6024828 AUGUSTUS intron 91 1270 0.46 + . transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS intron 1408 1658 1 + . transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS intron 1741 1862 1 + . transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS CDS 1 90 0.46 + 0 transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS CDS 1271 1407 1 + 0 transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS CDS 1659 1740 1 + 1 transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS CDS 1863 2012 1 + 0 transcript_id "g256.t1"; gene_id "g256"; scaffold_26_6022217-6024828 AUGUSTUS stop_codon 2010 2012 . + 0 transcript_id "g256.t1"; gene_id "g256"; # protein sequence = [RETKIELDGWSQTKRERERKKEREYSNKNQAKIKARDLRGKKKEELLKQLDDLKNELSQLRVAKVTGGAASKLSKICV # VRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRAIRRRLNKHEESLKTKKQQRKDLLYSVRKFAVKA] # end gene g256 ### # # ----- sequence number 250 (length = 4836, name = scaffold_26_6368812-6373647) ----- # # annotation: # Sequence scaffold_26_6368812-6373647 length=4836 scaffold_26_6368812-6373647 database start_codon 601 603 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 703 1017 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 1179 1305 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 1406 1517 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 1749 1858 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 2045 2133 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 2247 2350 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 2454 2567 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 2664 2862 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 3006 3157 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 3265 3407 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 3550 3739 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database intron 3849 4077 . + . transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 601 702 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 1018 1178 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 1306 1405 . + 1 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 1518 1748 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 1859 2044 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 2134 2246 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 2351 2453 . + 1 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 2568 2663 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 2863 3005 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 3158 3264 . + 1 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 3408 3549 . + 2 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 3740 3848 . + 1 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database CDS 4078 4236 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; scaffold_26_6368812-6373647 database stop_codon 4234 4236 . + 0 transcript_id "g_1805-T1.1"; gene_id "g_1805-T1"; # Predicted genes for sequence number 250 on both strands # start gene g257 scaffold_26_6368812-6373647 AUGUSTUS gene 601 4236 0.56 + . g257 scaffold_26_6368812-6373647 AUGUSTUS transcript 601 4236 0.56 + . g257.t1 scaffold_26_6368812-6373647 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 703 1050 0.91 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 1179 1305 0.82 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 1406 1517 0.97 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 1785 1858 0.81 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 2045 2133 1 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 2247 2350 1 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 2454 2567 0.95 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 2664 2862 0.95 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 3006 3157 1 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 3265 3407 1 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 3550 3739 1 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS intron 3849 4077 1 + . transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 601 702 0.96 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 1051 1178 0.92 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 1306 1405 0.79 + 1 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 1518 1784 0.81 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 1859 2044 1 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 2134 2246 1 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 2351 2453 1 + 1 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 2568 2663 0.95 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 2863 3005 1 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 3158 3264 1 + 1 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 3408 3549 1 + 2 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 3740 3848 1 + 1 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS CDS 4078 4236 1 + 0 transcript_id "g257.t1"; gene_id "g257"; scaffold_26_6368812-6373647 AUGUSTUS stop_codon 4234 4236 . + 0 transcript_id "g257.t1"; gene_id "g257"; # protein sequence = [MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQSALPFLDLHGTPRLEFHQSVFDELRDKLMERVATIAEGKEEDRY # GKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKVVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSNDLSILHNFF # SPSPKTRRQGEVRPPPSVPSVPQVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDISEICSVDPCHKFTWCLDACIREKF # VDAKRARELQGFLDGVRKGQEQVLGDLSMILCDPFACNTLVLSTVRNLQELLSQDALPRDSPDLLLLLRMLSLGQGAWDMIDSQVFKEPRLDLEVVTR # FLPAMMSVVVDDYTFTVEQKLPSEEKTSVTYPTSLPDSFNKYLQENRVACEMGLYYVLHIAKQRNKNALQRLLPSLVETLNDMAFGDIFLHLLTGHLT # LLSDEFSTEEFCSAVFDGFLLTSYSSKENVHRHSLRLLLHLHQKVLPSYMETLMKTLEPPKQSSEPVKELYTQLTEKLEAQKKSPPEPDEAPSLDLGL # HPVTVPTTASTPTTPL] # end gene g257 ### # # ----- sequence number 251 (length = 2581, name = scaffold_26_8575692-8578272) ----- # # annotation: # Sequence scaffold_26_8575692-8578272 length=2581 scaffold_26_8575692-8578272 database start_codon 601 603 . + 0 transcript_id "g_1809-T1.1"; gene_id "g_1809-T1"; scaffold_26_8575692-8578272 database intron 865 1303 . + . transcript_id "g_1809-T1.1"; gene_id "g_1809-T1"; scaffold_26_8575692-8578272 database CDS 601 864 . + 0 transcript_id "g_1809-T1.1"; gene_id "g_1809-T1"; scaffold_26_8575692-8578272 database CDS 1304 1981 . + 0 transcript_id "g_1809-T1.1"; gene_id "g_1809-T1"; scaffold_26_8575692-8578272 database stop_codon 1979 1981 . + 0 transcript_id "g_1809-T1.1"; gene_id "g_1809-T1"; # Predicted genes for sequence number 251 on both strands # start gene g258 scaffold_26_8575692-8578272 AUGUSTUS gene 601 1981 1 + . g258 scaffold_26_8575692-8578272 AUGUSTUS transcript 601 1981 1 + . g258.t1 scaffold_26_8575692-8578272 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g258.t1"; gene_id "g258"; scaffold_26_8575692-8578272 AUGUSTUS intron 865 1303 1 + . transcript_id "g258.t1"; gene_id "g258"; scaffold_26_8575692-8578272 AUGUSTUS CDS 601 864 1 + 0 transcript_id "g258.t1"; gene_id "g258"; scaffold_26_8575692-8578272 AUGUSTUS CDS 1304 1981 1 + 0 transcript_id "g258.t1"; gene_id "g258"; scaffold_26_8575692-8578272 AUGUSTUS stop_codon 1979 1981 . + 0 transcript_id "g258.t1"; gene_id "g258"; # protein sequence = [MAVRNQAYGFKSATMVQPANGGHAYLFGNGSENDLSEEDGEASELRPRGRERLRRSTSREKMDDIIYLVKDIQEGDTL # NSVSLQYFCSVADIKRANNLLSEQDFFALRSIKIPVKRFSVLTETHNTASLKPASPSGARRIPQTPGTSLESSDSSSSSTDSVEGFLQEKDKDIELLV # KSTCPSRSSLNEVVSSLSPQQPLLSEEADFKPAPRKDPYYGADWGMRWWTAVAIMLVVGIVTPVFYLLYYEVLVKADVSHHATMQSHKVAVTQATEHL # VRAPENRRDVGGNVPRPETHGLGHYSDVEGHPASKQKIT] # end gene g258 ### # # ----- sequence number 252 (length = 10188, name = scaffold_27_614705-624892) ----- # # annotation: # Sequence scaffold_27_614705-624892 length=10188 scaffold_27_614705-624892 database start_codon 601 603 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 725 1006 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 1091 1290 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 1386 1669 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 1782 1914 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 2020 2255 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 2468 2910 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 3091 3482 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 3576 3771 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 3872 4890 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 5032 5261 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 5474 6709 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 6856 7309 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 7383 8175 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 8300 8587 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 8756 9087 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 9264 9347 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database intron 9477 9561 . + . transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 601 724 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 1007 1090 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 1291 1385 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 1670 1781 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 1915 2019 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 2256 2467 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 2911 3090 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 3483 3575 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 3772 3871 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 4891 5031 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 5262 5473 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 6710 6855 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 7310 7382 . + 1 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 8176 8299 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 8588 8755 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 9088 9263 . + 2 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 9348 9476 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database CDS 9562 9588 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; scaffold_27_614705-624892 database stop_codon 9586 9588 . + 0 transcript_id "g_1822-T1.1"; gene_id "g_1822-T1"; # Predicted genes for sequence number 252 on both strands # start gene g259 scaffold_27_614705-624892 AUGUSTUS gene 1 9588 0.5 + . g259 scaffold_27_614705-624892 AUGUSTUS transcript 1 9588 0.5 + . g259.t1 scaffold_27_614705-624892 AUGUSTUS intron 1 598 0.58 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 725 1006 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 1091 1290 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 1386 1669 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 1782 1914 0.97 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 2020 2255 0.97 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 2468 2910 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 3091 3482 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 3576 3771 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 3872 4890 0.94 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 5032 5261 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 5474 6709 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 6856 7309 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 7383 7756 0.99 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 7802 8175 0.97 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 8300 8587 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 8756 9087 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 9264 9347 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS intron 9477 9561 1 + . transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 599 724 0.91 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 1007 1090 1 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 1291 1385 1 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 1670 1781 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 1915 2019 0.97 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 2256 2467 1 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 2911 3090 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 3483 3575 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 3772 3871 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 4891 5031 0.94 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 5262 5473 1 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 6710 6855 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 7310 7382 1 + 1 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 7757 7801 0.97 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 8176 8299 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 8588 8755 1 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 9088 9263 1 + 2 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 9348 9476 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS CDS 9562 9588 1 + 0 transcript_id "g259.t1"; gene_id "g259"; scaffold_27_614705-624892 AUGUSTUS stop_codon 9586 9588 . + 0 transcript_id "g259.t1"; gene_id "g259"; # protein sequence = [MEHLVRELQVLLKLLDHECVSSATAEKMTTVRNLLDHFQPAVNGSGFIYMNTSLYRNGTSFVESLFDEFDCDLQELSV # SPEELKEQQEEVEGSSVTQPSKSSPTDTPPPLPTTPIPEDYYEEAVPLDPGTMPQYITTRVSSSPPISGEIQDAYYEDADENYPATHINGPCKNSYND # SDALSSSYESYDEEEEEAKGRGRPPRWKAEENAVGPMKDCRICAFLLRKKRFGQWAKQLTVVRDNQLQCYKSIKDSSPYMELPLNLCNVIYVPKDGRR # KKHELRFSLPGGQALVLAVQSKEQAQRWLQVIQEVASQANSNETLEGSSSPIIQRKLELDKLLSVDKHMSDSDSAVTGDNLPSNHGPGRENGEQGRAK # RGPFSDLTGSMSRAAGRKITRIISFSKKKPPSSSTSLHDNPRCGYLNVLVGQSWVENWCSVRGGTLHLHRDRGDLRTPVSSIPLGGAEVVPGFGAKHP # FAFRILQGATELAALEASSSEEMGRWLGVLLAESGASTLPEALHYDYIDVDTISNIQDAARHSFLWATSSSSTSTDSRTYDEVPYESILAVSAIPPTA # LWEISEQGAPEARPPQVKRHASFSSRDAEREEPQVTVKRHASSRSTQDVNQYGKYGKTRAEEDARRYLREKEELEREKEAIRQALNTLRSQRREARHQ # IKTLTGRQQQAAEQRVSQLEEACRGKEGERVDLELRLSEVKENLKKSLAGGVLGPPTDNKPISKVLLRKVENVYSESTTPVNCAAEMKKRPPSLYASS # RGNVMQKAKEWESKKGT] # end gene g259 ### # # ----- sequence number 253 (length = 7685, name = scaffold_27_1107365-1115049) ----- # # annotation: # Sequence scaffold_27_1107365-1115049 length=7685 scaffold_27_1107365-1115049 database start_codon 601 603 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 679 1053 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 1129 1350 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 1567 1753 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 1859 3620 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 3810 4321 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 4406 6698 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database intron 6819 6995 . + . transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 601 678 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 1054 1128 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 1351 1566 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 1754 1858 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 3621 3809 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 4322 4405 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 6699 6818 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database CDS 6996 7085 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; scaffold_27_1107365-1115049 database stop_codon 7083 7085 . + 0 transcript_id "g_1827-T1.1"; gene_id "g_1827-T1"; # Predicted genes for sequence number 253 on both strands # start gene g260 scaffold_27_1107365-1115049 AUGUSTUS gene 1 7085 0.66 + . g260 scaffold_27_1107365-1115049 AUGUSTUS transcript 1 7085 0.66 + . g260.t1 scaffold_27_1107365-1115049 AUGUSTUS intron 1 561 1 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 679 1053 1 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 1129 1350 1 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 1567 1753 1 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 1859 3620 0.9 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 3810 4321 1 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 4406 5190 0.72 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 5287 6698 0.99 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS intron 6819 6995 1 + . transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 562 678 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 1054 1128 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 1351 1566 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 1754 1858 0.9 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 3621 3809 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 4322 4405 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 5191 5286 0.72 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 6699 6818 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS CDS 6996 7085 1 + 0 transcript_id "g260.t1"; gene_id "g260"; scaffold_27_1107365-1115049 AUGUSTUS stop_codon 7083 7085 . + 0 transcript_id "g260.t1"; gene_id "g260"; # protein sequence = [AVSVSQKGPFVTAMHKANSKTLGKTAKALEAQEVLKKKQETMKLQQDMRKKKQEMLEKQIEWQKALISRLERNRRMKP # EERANIMKTLKDLTEKISQLQNEMTPASQPSSSSASAPIPATASVVPVPPGQPKTKTDAQKELLDAELDFHKKLSSGEDTSDLKRRLGLLQVEATRLG # LIPPGRGKGPVPRGRGRGRGRGRGRGGGNHMVVDHRPRALAILGLTQEEKEEVKAHFLKFGEVEDLRDHDTTSVVMTFKTRSEAENTKELAKDVRDKS # VDLHNAGIGYKTIRKQFGAKAANQGAKFKGRVLQISWFKPKMPSASTEPEEEESKEEVNTEEVSPYLLAEEEEEDEDEDDEYESRSWRR] # end gene g260 ### # # ----- sequence number 254 (length = 10232, name = scaffold_27_1471946-1482177) ----- # # annotation: # Sequence scaffold_27_1471946-1482177 length=10232 scaffold_27_1471946-1482177 database start_codon 601 603 . + 0 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 719 2245 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 2380 3331 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 3456 4135 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 4217 4396 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 4561 4840 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 5001 7769 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 7903 8059 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 8268 9159 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database intron 9290 9453 . + . transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 601 718 . + 0 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 2246 2379 . + 2 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 3332 3455 . + 0 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 4136 4216 . + 2 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 4397 4560 . + 2 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 4841 5000 . + 0 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 7770 7902 . + 2 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 8060 8267 . + 1 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 9160 9289 . + 0 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database CDS 9454 9632 . + 2 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; scaffold_27_1471946-1482177 database stop_codon 9630 9632 . + 0 transcript_id "g_1828-T1.1"; gene_id "g_1828-T1"; # Predicted genes for sequence number 254 on both strands # start gene g261 scaffold_27_1471946-1482177 AUGUSTUS gene 1 5369 0.57 + . g261 scaffold_27_1471946-1482177 AUGUSTUS transcript 1 5369 0.57 + . g261.t1 scaffold_27_1471946-1482177 AUGUSTUS intron 1 190 0.73 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 337 542 1 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 719 2245 1 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 2380 3331 1 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 3456 4135 1 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 4217 4396 0.99 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 4561 4840 0.99 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS intron 5001 5175 1 + . transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 191 336 0.73 + 0 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 543 718 1 + 1 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 2246 2379 1 + 2 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 3332 3455 1 + 0 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 4136 4216 1 + 2 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 4397 4560 0.98 + 2 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 4841 5000 1 + 0 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS CDS 5176 5369 0.82 + 2 transcript_id "g261.t1"; gene_id "g261"; scaffold_27_1471946-1482177 AUGUSTUS stop_codon 5367 5369 . + 0 transcript_id "g261.t1"; gene_id "g261"; # protein sequence = [NCFKGYCIKLTPEILRHDGSWGSWTEFGSCSRTCGGGVRFRTRQCDNPAPSNGGRTCFGNSYEFELCNMEECTRALAD # FREEQCRMWDPYFLHEGSKHHWLPYEHPDHDERCQLYCQSRETGDVVAMNRMVHDGTRCSYKDAHSVCVRGDCEHVGCDNHIASDLQEDKCGVCGGDN # SSCKIIKGNFTRSTKKLGYLKILEIPKGARHLLIQESKATPHILAVKNQVTGDLFLNGEEDFPESRVLIEKGVEWEYQNDDDMETVQSIGPLRYGVLI # MVRSHGDSKVTLSYKYILHEEVQVSMETNLLQEDTVFFEWALKKWSHCSKHCGGEFLFYVSEMVGSEFLFYVSSEMVGSEFLFYVSVMVGSEFLFYVS # SERVESWLFLLGYGIFFSFC] # end gene g261 ### # start gene g262 scaffold_27_1471946-1482177 AUGUSTUS gene 6222 9632 0.6 + . g262 scaffold_27_1471946-1482177 AUGUSTUS transcript 6222 9632 0.6 + . g262.t1 scaffold_27_1471946-1482177 AUGUSTUS start_codon 6222 6224 . + 0 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS intron 6543 7443 0.99 + . transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS intron 7475 7769 0.95 + . transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS intron 7903 8059 1 + . transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS intron 8268 9159 0.99 + . transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS intron 9290 9453 1 + . transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS CDS 6222 6542 0.66 + 0 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS CDS 7444 7474 0.95 + 0 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS CDS 7770 7902 1 + 2 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS CDS 8060 8267 1 + 1 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS CDS 9160 9289 1 + 0 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS CDS 9454 9632 1 + 2 transcript_id "g262.t1"; gene_id "g262"; scaffold_27_1471946-1482177 AUGUSTUS stop_codon 9630 9632 . + 0 transcript_id "g262.t1"; gene_id "g262"; # protein sequence = [MSQERLGTVTHTSCPENVQFSWKCFLTQMLFSSLVMIIHNRVGSILALEACARPGSGRYGEEGGADPTGRRPEIRGLE # TRRWGWEEFFLPQPRSTAVAHSVDLVFLGVNSVVFDCAPGKQYTRFGCRRKADGKMVHRTFCVNIDKPRAISRDCNLKPCSHPVWKVGDWEDCSAPCG # KTGIQTRSVRCLQPLLDGGQRSIHSKYCSDERPEGRRPCNRHLCPASWRSGPWSQCSVSCGNGTQERQVMCSTPDNSAGLCMDSKPPTTRSCSLVPCS # GDQRNFLIQWLSRASPEFPAPKISSSKHSVFSSAPCALCCMLLMSWTLPLLTLSLTSDP] # end gene g262 ### # # ----- sequence number 255 (length = 2449, name = scaffold_27_1550821-1553269) ----- # # annotation: # Sequence scaffold_27_1550821-1553269 length=2449 scaffold_27_1550821-1553269 database start_codon 601 603 . + 0 transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database intron 750 959 . + . transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database intron 1122 1414 . + . transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database intron 1492 1862 . + . transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database CDS 601 749 . + 0 transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database CDS 960 1121 . + 1 transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database CDS 1415 1491 . + 1 transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database CDS 1863 1930 . + 2 transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; scaffold_27_1550821-1553269 database stop_codon 1928 1930 . + 0 transcript_id "g_1829-T1.1"; gene_id "g_1829-T1"; # Predicted genes for sequence number 255 on both strands # start gene g263 scaffold_27_1550821-1553269 AUGUSTUS gene 601 1930 0.72 + . g263 scaffold_27_1550821-1553269 AUGUSTUS transcript 601 1930 0.72 + . g263.t1 scaffold_27_1550821-1553269 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS intron 750 959 1 + . transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS intron 1122 1414 1 + . transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS intron 1492 1862 1 + . transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS CDS 601 749 0.72 + 0 transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS CDS 960 1121 1 + 1 transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS CDS 1415 1491 1 + 1 transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS CDS 1863 1930 1 + 2 transcript_id "g263.t1"; gene_id "g263"; scaffold_27_1550821-1553269 AUGUSTUS stop_codon 1928 1930 . + 0 transcript_id "g263.t1"; gene_id "g263"; # protein sequence = [MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAA # QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL] # end gene g263 ### # # ----- sequence number 256 (length = 3939, name = scaffold_27_1553270-1557208) ----- # # annotation: # Sequence scaffold_27_1553270-1557208 length=3939 scaffold_27_1553270-1557208 database start_codon 520 522 . + 0 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database intron 597 1511 . + . transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database intron 1691 1794 . + . transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database intron 1863 1981 . + . transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database intron 2190 2569 . + . transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database intron 2597 3331 . + . transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database CDS 520 596 . + 0 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database CDS 1512 1690 . + 1 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database CDS 1795 1862 . + 2 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database CDS 1982 2189 . + 0 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database CDS 2570 2596 . + 2 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database CDS 3332 3339 . + 2 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; scaffold_27_1553270-1557208 database stop_codon 3337 3339 . + 0 transcript_id "g_1830-T1.1"; gene_id "g_1830-T1"; # Predicted genes for sequence number 256 on both strands # start gene g264 scaffold_27_1553270-1557208 AUGUSTUS gene 520 3339 0.82 + . g264 scaffold_27_1553270-1557208 AUGUSTUS transcript 520 3339 0.82 + . g264.t1 scaffold_27_1553270-1557208 AUGUSTUS start_codon 520 522 . + 0 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS intron 597 1511 0.85 + . transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS intron 1691 1794 0.98 + . transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS intron 1863 1981 1 + . transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS intron 2190 2569 0.98 + . transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS intron 2597 3331 0.97 + . transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS CDS 520 596 1 + 0 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS CDS 1512 1690 0.85 + 1 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS CDS 1795 1862 0.98 + 2 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS CDS 1982 2189 1 + 0 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS CDS 2570 2596 0.97 + 2 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS CDS 3332 3339 0.99 + 2 transcript_id "g264.t1"; gene_id "g264"; scaffold_27_1553270-1557208 AUGUSTUS stop_codon 3337 3339 . + 0 transcript_id "g264.t1"; gene_id "g264"; # protein sequence = [MTEPTRPLIGASSQQTMVDVGATTVVSPSPSSTRAYKVAGFTLLACLLIAGQGVTAYFLLRQGNDITSLEKQTDNLKG # QMTNSHSASVPKKMHVPVNPMPRLVHLEDEGTQLSGTQCQLEALGLAPVNLPSFRPACDQAGNYMPQQCWKDLCWCVDASGMEVDGSKMHGKAFCAVS # SGMNLGLEFTDE] # end gene g264 ### # # ----- sequence number 257 (length = 2953, name = scaffold_27_1576879-1579831) ----- # # annotation: # Sequence scaffold_27_1576879-1579831 length=2953 scaffold_27_1576879-1579831 database start_codon 601 603 . + 0 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database intron 626 1015 . + . transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database intron 1148 1347 . + . transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database intron 1620 1714 . + . transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database intron 1824 2129 . + . transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database CDS 601 625 . + 0 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database CDS 1016 1147 . + 2 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database CDS 1348 1619 . + 2 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database CDS 1715 1823 . + 0 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database CDS 2130 2353 . + 2 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; scaffold_27_1576879-1579831 database stop_codon 2351 2353 . + 0 transcript_id "g_1831-T1.1"; gene_id "g_1831-T1"; # Predicted genes for sequence number 257 on both strands # start gene g265 scaffold_27_1576879-1579831 AUGUSTUS gene 601 2353 0.89 + . g265 scaffold_27_1576879-1579831 AUGUSTUS transcript 601 2353 0.89 + . g265.t1 scaffold_27_1576879-1579831 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS intron 626 1015 0.94 + . transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS intron 1148 1347 0.98 + . transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS intron 1620 1714 0.99 + . transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS intron 1824 2129 0.98 + . transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS CDS 601 625 0.94 + 0 transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS CDS 1016 1147 1 + 2 transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS CDS 1348 1619 0.98 + 2 transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS CDS 1715 1823 0.99 + 0 transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS CDS 2130 2353 0.98 + 2 transcript_id "g265.t1"; gene_id "g265"; scaffold_27_1576879-1579831 AUGUSTUS stop_codon 2351 2353 . + 0 transcript_id "g265.t1"; gene_id "g265"; # protein sequence = [MEDLYIKPGNQDRGWNDPPQFSYGLQAAQAQGGPKRTLLNKRVPPPQLTGSPGPVPGMTPPTTMPLTPPTNPIAPPPC # NMNTPPSACPLVAKPPCGLGTPPSVQCPMAAHRGTSSSQSEKEPVIDDVLAGLNWALTACRHTVKKQVCDDVDKRVRLFEDMWRSGRLSLPVRRRMST # LAQELRGRRWDSADDIHRSLMVDHVTEVGQWMVGVKRLIAETRNLTPDLLSTNEDEEEQEESTTNNNNTDSPVPDSP] # end gene g265 ### # # ----- sequence number 258 (length = 3280, name = scaffold_27_3120843-3124122) ----- # # annotation: # Sequence scaffold_27_3120843-3124122 length=3280 scaffold_27_3120843-3124122 database start_codon 601 603 . + 0 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database intron 822 930 . + . transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database intron 1114 1221 . + . transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database intron 1297 1487 . + . transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database intron 1527 1826 . + . transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database intron 2004 2215 . + . transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database intron 2327 2628 . + . transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 601 821 . + 0 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 931 1113 . + 1 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 1222 1296 . + 1 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 1488 1526 . + 1 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 1827 2003 . + 1 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 2216 2326 . + 1 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database CDS 2629 2680 . + 1 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; scaffold_27_3120843-3124122 database stop_codon 2678 2680 . + 0 transcript_id "g_1847-T1.1"; gene_id "g_1847-T1"; # Predicted genes for sequence number 258 on both strands # start gene g266 scaffold_27_3120843-3124122 AUGUSTUS gene 601 2745 0.45 + . g266 scaffold_27_3120843-3124122 AUGUSTUS transcript 601 2745 0.45 + . g266.t1 scaffold_27_3120843-3124122 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS intron 822 930 1 + . transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS intron 1114 1221 0.95 + . transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS intron 1297 1826 0.93 + . transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS intron 2004 2215 0.94 + . transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS intron 2327 2738 0.48 + . transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS CDS 601 821 1 + 0 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS CDS 931 1113 1 + 1 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS CDS 1222 1296 0.95 + 1 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS CDS 1827 2003 0.94 + 1 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS CDS 2216 2326 0.99 + 1 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS CDS 2739 2745 0.49 + 1 transcript_id "g266.t1"; gene_id "g266"; scaffold_27_3120843-3124122 AUGUSTUS stop_codon 2743 2745 . + 0 transcript_id "g266.t1"; gene_id "g266"; # protein sequence = [MSYSSSRGSSRNTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGMDGKVLCG # ARIRVELSTGMSRKSRYGRPSRRNFDPNDRCYQCGESGHYAYDCYRFSKRGGGRRSRSRSRSRSRSRSRGRRYRSRSRSNDRSGSPARSKSRSPVRRS # RTPVRRSRTPVRRSRTPVRRSRTPVRRSRTPVRRSRSPVRRASRSRSRSRSRSVSRPRARNVSRSRSRSRSRSATPKKDRA] # end gene g266 ### # # ----- sequence number 259 (length = 2793, name = scaffold_27_3131170-3133962) ----- # # annotation: # Sequence scaffold_27_3131170-3133962 length=2793 scaffold_27_3131170-3133962 database start_codon 601 603 . + 0 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database intron 784 869 . + . transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database intron 992 1460 . + . transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database intron 1663 1767 . + . transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database intron 1826 1952 . + . transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database intron 2049 2134 . + . transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database CDS 601 783 . + 0 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database CDS 870 991 . + 0 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database CDS 1461 1662 . + 1 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database CDS 1768 1825 . + 0 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database CDS 1953 2048 . + 2 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database CDS 2135 2193 . + 2 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; scaffold_27_3131170-3133962 database stop_codon 2191 2193 . + 0 transcript_id "g_1848-T1.1"; gene_id "g_1848-T1"; # Predicted genes for sequence number 259 on both strands # start gene g267 scaffold_27_3131170-3133962 AUGUSTUS gene 1 2193 0.56 + . g267 scaffold_27_3131170-3133962 AUGUSTUS transcript 1 2193 0.56 + . g267.t1 scaffold_27_3131170-3133962 AUGUSTUS intron 1 354 0.81 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS intron 424 526 0.76 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS intron 784 869 1 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS intron 992 1460 0.73 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS intron 1663 1767 1 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS intron 1826 1952 1 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS intron 2049 2134 1 + . transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 355 423 0.76 + 2 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 527 783 0.8 + 2 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 870 991 1 + 0 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 1461 1662 0.73 + 1 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 1768 1825 1 + 0 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 1953 2048 1 + 2 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS CDS 2135 2193 1 + 2 transcript_id "g267.t1"; gene_id "g267"; scaffold_27_3131170-3133962 AUGUSTUS stop_codon 2191 2193 . + 0 transcript_id "g267.t1"; gene_id "g267"; # protein sequence = [PNANSNKRARQPALLGDHPPDYGGPQGGYHGYNDESYGPPPHYEGRRMGPPMGGRGRGQRFGPGYGPPPPEYGPHADS # PVVMVYGLEPSKINADRVFNVFCLYGNVERVKFMKSKPGAAMVEMGDCYAVDRAITHLNNNFLFGQKLNVCVSKQQAIMPGQSYELEDGSSSFKDFHG # SRNNRFTSPEQAAKNRIQHPSNVLHFFNGQPDISNEIFSQVCDELGIKGASNVKLFSGKSERSSSGLLEWESINDAMEALALMNHYQMKNPSGPYPYT # LKLCFSTAQHAN] # end gene g267 ### # # ----- sequence number 260 (length = 5717, name = scaffold_27_4097985-4103701) ----- # # annotation: # Sequence scaffold_27_4097985-4103701 length=5717 scaffold_27_4097985-4103701 database start_codon 601 603 . + 0 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database intron 605 2883 . + . transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database intron 3071 3224 . + . transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database intron 3382 3857 . + . transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database intron 4036 4409 . + . transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database intron 4484 4673 . + . transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database intron 4740 5042 . + . transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 601 604 . + 0 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 2884 3070 . + 2 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 3225 3381 . + 1 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 3858 4035 . + 0 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 4410 4483 . + 2 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 4674 4739 . + 0 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database CDS 5043 5117 . + 0 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; scaffold_27_4097985-4103701 database stop_codon 5115 5117 . + 0 transcript_id "g_1854-T1.1"; gene_id "g_1854-T1"; # Predicted genes for sequence number 260 on both strands # start gene g268 scaffold_27_4097985-4103701 AUGUSTUS gene 1175 5117 0.67 + . g268 scaffold_27_4097985-4103701 AUGUSTUS transcript 1175 5117 0.67 + . g268.t1 scaffold_27_4097985-4103701 AUGUSTUS start_codon 1175 1177 . + 0 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS intron 1212 2883 0.87 + . transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS intron 3071 3224 0.96 + . transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS intron 3382 3857 0.96 + . transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS intron 4036 4409 0.99 + . transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS intron 4484 4673 0.82 + . transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS intron 4740 5042 1 + . transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 1175 1211 0.87 + 0 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 2884 3070 1 + 2 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 3225 3381 0.92 + 1 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 3858 4035 0.98 + 0 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 4410 4483 0.81 + 2 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 4674 4739 1 + 0 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS CDS 5043 5117 0.99 + 0 transcript_id "g268.t1"; gene_id "g268"; scaffold_27_4097985-4103701 AUGUSTUS stop_codon 5115 5117 . + 0 transcript_id "g268.t1"; gene_id "g268"; # protein sequence = [MTTESRQKGVMQGCYDCCVRCLGSVPYPSLVATLLCFTGIALFCGCGHEALAQTEVLVETHFARNTQDYAVMASFIKY # FQFVIYGLAGFFFLYCILLLAEGFYTTSAVKQTFGEFRSTRCGRCLSLTFLVVTYILVVIWLAVFAFAAVPVFFLFNMAQTCHNINLLAETSPSINQH # SWICMDARQYGLLPWNAMPGKACGMTLASICKTKEFFGTYDYYIAAFAGAGIALLALFLYVIATTYNYAVLRFLGRKGMRC] # end gene g268 ### # # ----- sequence number 261 (length = 4721, name = scaffold_27_4348822-4353542) ----- # # annotation: # Sequence scaffold_27_4348822-4353542 length=4721 scaffold_27_4348822-4353542 database start_codon 601 603 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 812 1128 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 1212 1324 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 1410 1564 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 1620 1862 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 1942 2083 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 2158 2268 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 2376 2918 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 3055 3171 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 3308 3623 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database intron 3798 3956 . + . transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 601 811 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 1129 1211 . + 2 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 1325 1409 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 1565 1619 . + 2 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 1863 1941 . + 1 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 2084 2157 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 2269 2375 . + 1 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 2919 3054 . + 2 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 3172 3307 . + 1 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 3624 3797 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database CDS 3957 4121 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; scaffold_27_4348822-4353542 database stop_codon 4119 4121 . + 0 transcript_id "g_1860-T1.1"; gene_id "g_1860-T1"; # Predicted genes for sequence number 261 on both strands # start gene g269 scaffold_27_4348822-4353542 AUGUSTUS gene 601 4121 0.55 + . g269 scaffold_27_4348822-4353542 AUGUSTUS transcript 601 4121 0.55 + . g269.t1 scaffold_27_4348822-4353542 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 812 1128 0.99 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 1212 1324 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 1410 1564 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 1620 1862 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 1942 2083 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 2158 2268 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 2376 2918 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 3055 3171 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 3308 3623 1 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS intron 3798 3992 0.61 + . transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 601 811 0.92 + 0 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 1129 1211 1 + 2 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 1325 1409 1 + 0 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 1565 1619 1 + 2 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 1863 1941 1 + 1 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 2084 2157 1 + 0 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 2269 2375 1 + 1 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 2919 3054 1 + 2 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 3172 3307 1 + 1 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 3624 3797 1 + 0 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS CDS 3993 4121 0.61 + 0 transcript_id "g269.t1"; gene_id "g269"; scaffold_27_4348822-4353542 AUGUSTUS stop_codon 4119 4121 . + 0 transcript_id "g269.t1"; gene_id "g269"; # protein sequence = [MWREAKETCPFAEDSFSRFLTQSNMYGLCQTGQQELLAATLKGKVVCFKYQDLLQKIRPVAKEVQFTYIPVDAEIVSI # DAFTKSPPNQGLVVGITFIKDSGDKATPFLNIYCDYEPGSEFNLESIAQSCLNLELQFTPFQLYHTEVHRGDEGSETVFLLSGHDQRIHLYKENASLH # QFEEQPVERLFPELQKLPSNVLWMDVLSIPGDRRLSAFGCQNGCVGLALVDQTGPEILQSWCIQQDSPISTVLLFPLRCSSDHEGYNLLVTSTIEMAV # VYRDVQESGVSRPVCLEESDQSDAVLCALTVDLDFDGQREILLGTHGQELLCYKFQQPMRGAAGQFQLLWRRSFKSSLLSIMHLDLTGDGLKELAILT # LKGLHILQRLAQRVSILTTASEFQPITGHNTEESDVAANKELDAIEPPSI] # end gene g269 ### # # ----- sequence number 262 (length = 4445, name = scaffold_27_4383315-4387759) ----- # # annotation: # Sequence scaffold_27_4383315-4387759 length=4445 scaffold_27_4383315-4387759 database start_codon 601 603 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 648 801 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 839 1047 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 1141 1231 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 1290 1798 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 1864 2228 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 2298 2398 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 2478 2844 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 2962 3331 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database intron 3391 3818 . + . transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 601 647 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 802 838 . + 1 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 1048 1140 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 1232 1289 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 1799 1863 . + 2 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 2229 2297 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 2399 2477 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 2845 2961 . + 2 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 3332 3390 . + 2 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database CDS 3819 3845 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; scaffold_27_4383315-4387759 database stop_codon 3843 3845 . + 0 transcript_id "g_1861-T1.1"; gene_id "g_1861-T1"; # Predicted genes for sequence number 262 on both strands # start gene g270 scaffold_27_4383315-4387759 AUGUSTUS gene 601 3845 0.66 + . g270 scaffold_27_4383315-4387759 AUGUSTUS transcript 601 3845 0.66 + . g270.t1 scaffold_27_4383315-4387759 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 648 801 0.73 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 839 1047 0.9 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 1141 1231 1 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 1290 1798 1 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 1864 2228 0.95 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 2298 2398 1 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 2478 2844 1 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 2962 3331 1 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS intron 3391 3818 0.93 + . transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 601 647 0.8 + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 802 838 0.9 + 1 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 1048 1140 0.92 + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 1232 1289 1 + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 1799 1863 0.95 + 2 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 2229 2297 1 + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 2399 2477 1 + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 2845 2961 1 + 2 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 3332 3390 0.93 + 2 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS CDS 3819 3845 1 + 0 transcript_id "g270.t1"; gene_id "g270"; scaffold_27_4383315-4387759 AUGUSTUS stop_codon 3843 3845 . + 0 transcript_id "g270.t1"; gene_id "g270"; # protein sequence = [MFLAKKLIGGILDVVSNIDPGQFVPAEPPAPRRPLAYAEHNESDEERQFRKVFQQLAGEDMEVSATELMNILNKIISK # HGDLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIKKWQGVYKAHDADHSGVIGADELPAAFRAAGFPLNDQLFQMIIRRYSDEQGNMDFDN # YIGCLVRLDAMCRAFKTLDKDNNGTIKVNVQEWLQLTMYS] # end gene g270 ### # # ----- sequence number 263 (length = 3511, name = scaffold_27_4805081-4808591) ----- # # annotation: # Sequence scaffold_27_4805081-4808591 length=3511 scaffold_27_4805081-4808591 database start_codon 601 603 . + 0 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 718 964 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 1034 1152 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 1232 1560 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 1629 1860 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 1961 2213 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 2265 2479 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database intron 2540 2846 . + . transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 601 717 . + 0 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 965 1033 . + 0 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 1153 1231 . + 0 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 1561 1628 . + 2 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 1861 1960 . + 0 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 2214 2264 . + 2 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 2480 2539 . + 2 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database CDS 2847 2911 . + 2 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; scaffold_27_4805081-4808591 database stop_codon 2909 2911 . + 0 transcript_id "g_1863-T1.1"; gene_id "g_1863-T1"; # Predicted genes for sequence number 263 on both strands # start gene g271 scaffold_27_4805081-4808591 AUGUSTUS gene 601 2911 0.29 + . g271 scaffold_27_4805081-4808591 AUGUSTUS transcript 601 2911 0.29 + . g271.t1 scaffold_27_4805081-4808591 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 718 964 0.98 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 1034 1152 0.96 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 1232 1560 1 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 1629 1860 0.96 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 1961 2213 0.97 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 2265 2479 0.49 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS intron 2540 2846 1 + . transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 601 717 0.66 + 0 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 965 1033 0.96 + 0 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 1153 1231 1 + 0 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 1561 1628 1 + 2 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 1861 1960 0.96 + 0 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 2214 2264 0.49 + 2 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 2480 2539 1 + 2 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS CDS 2847 2911 1 + 2 transcript_id "g271.t1"; gene_id "g271"; scaffold_27_4805081-4808591 AUGUSTUS stop_codon 2909 2911 . + 0 transcript_id "g271.t1"; gene_id "g271"; # protein sequence = [MCAMRVDAKVVMLGKESVGKTSLVERYVHHRFLVGPYQNTIGAAFVAKAIQVGEKVITLGIWDTAGSERYEAMSRIYY # RGARAAIVCYDLTDSSSFQRARFWVKELQNCEEHCKIYLCGTKSDLVESDRGLRQVDYHDVQDFADEIGAQNFETSSKTGNNVDELFRKVAEDYNSIA # FQFMTEETGVDLGQKKDSYFYACCHN] # end gene g271 ### # # ----- sequence number 264 (length = 8008, name = scaffold_27_5117440-5125447) ----- # # annotation: # Sequence scaffold_27_5117440-5125447 length=8008 scaffold_27_5117440-5125447 database start_codon 601 603 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 646 1275 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 1414 1690 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 1880 2633 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 2743 3243 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 3345 3494 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 3617 3908 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 4030 4117 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 4248 4478 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 4584 4764 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 4944 5160 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 5271 5689 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 5796 6179 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 6353 6445 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database intron 6694 7298 . + . transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 601 645 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 1276 1413 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 1691 1879 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 2634 2742 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 3244 3344 . + 2 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 3495 3616 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 3909 4029 . + 1 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 4118 4247 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 4479 4583 . + 2 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 4765 4943 . + 2 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 5161 5270 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 5690 5795 . + 1 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 6180 6352 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 6446 6693 . + 1 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database CDS 7299 7408 . + 2 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; scaffold_27_5117440-5125447 database stop_codon 7406 7408 . + 0 transcript_id "g_1866-T1.1"; gene_id "g_1866-T1"; # Predicted genes for sequence number 264 on both strands # start gene g272 scaffold_27_5117440-5125447 AUGUSTUS gene 601 7408 0.86 + . g272 scaffold_27_5117440-5125447 AUGUSTUS transcript 601 7408 0.86 + . g272.t1 scaffold_27_5117440-5125447 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 646 1275 0.98 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 1414 1690 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 1880 2633 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 2743 3243 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 3345 3494 0.9 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 3617 3908 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 4030 4117 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 4248 4478 0.98 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 4584 4764 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 4944 5160 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 5271 5689 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 5796 6179 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 6353 6445 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS intron 6694 7298 1 + . transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 601 645 0.98 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 1276 1413 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 1691 1879 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 2634 2742 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 3244 3344 0.9 + 2 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 3495 3616 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 3909 4029 1 + 1 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 4118 4247 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 4479 4583 0.98 + 2 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 4765 4943 1 + 2 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 5161 5270 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 5690 5795 1 + 1 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 6180 6352 1 + 0 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 6446 6693 1 + 1 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS CDS 7299 7408 1 + 2 transcript_id "g272.t1"; gene_id "g272"; scaffold_27_5117440-5125447 AUGUSTUS stop_codon 7406 7408 . + 0 transcript_id "g272.t1"; gene_id "g272"; # protein sequence = [MGDTVTEYTSRLQQQEREIKTLSAEIEGLKNPASQPVASPNLDELREENAKLKYRLNILKRSLQEERSQCSKTMMNIN # QRLQEVFGEAIRAACPDLEDPPLAVTPNQQAKFGDYQCNSAMAMAQMMKSKGLKVNPREIAEKIVQNLPDNELVEKTEIAGPGFINIHLKRTFVSKLL # TNLLVNGVQPPPLTSRKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGDWGTQFGMLIAHLQDKFPNYLTVSPPIGDLQSFY # KESKKRFDEDEVFKKRAYQCVVRLQSKEPDFIKAWNLICDVSRNEFQKVYSCLDIHILERGESFYQDMMTAVVQEFEQKGLVQMDEGRKIVFSPGYSV # PLTVVKSDGGYTYDTSDLAALRQRLFLEKADVIIYVTDSGQASHFQLVFAAAQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLGEG # LKRSMDKLKDKERDKVLTPEELTKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRIRSIARLANVDEPTLRKAAGSTEVPLA # HDKEWKLGRCILRFPEILQKILEDLLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEVIKVNMGRMLLCDATASIMAQGFNILGINPVQRM] # end gene g272 ### # # ----- sequence number 265 (length = 3990, name = scaffold_27_5824599-5828588) ----- # # annotation: # Sequence scaffold_27_5824599-5828588 length=3990 scaffold_27_5824599-5828588 database start_codon 601 603 . + 0 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database intron 659 2208 . + . transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database intron 2329 2536 . + . transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database intron 2603 2746 . + . transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database intron 2851 3026 . + . transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database intron 3159 3273 . + . transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database CDS 601 658 . + 0 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database CDS 2209 2328 . + 2 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database CDS 2537 2602 . + 2 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database CDS 2747 2850 . + 2 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database CDS 3027 3158 . + 0 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database CDS 3274 3390 . + 0 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; scaffold_27_5824599-5828588 database stop_codon 3388 3390 . + 0 transcript_id "g_1869-T1.1"; gene_id "g_1869-T1"; # Predicted genes for sequence number 265 on both strands # start gene g273 scaffold_27_5824599-5828588 AUGUSTUS gene 2102 3390 0.4 + . g273 scaffold_27_5824599-5828588 AUGUSTUS transcript 2102 3390 0.4 + . g273.t1 scaffold_27_5824599-5828588 AUGUSTUS start_codon 2102 2104 . + 0 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS intron 2118 2208 0.44 + . transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS intron 2329 2536 1 + . transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS intron 2603 2746 1 + . transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS intron 2851 3026 1 + . transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS intron 3159 3273 0.84 + . transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS CDS 2102 2117 0.44 + 0 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS CDS 2209 2328 0.99 + 2 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS CDS 2537 2602 1 + 2 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS CDS 2747 2850 1 + 2 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS CDS 3027 3158 0.84 + 0 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS CDS 3274 3390 1 + 0 transcript_id "g273.t1"; gene_id "g273"; scaffold_27_5824599-5828588 AUGUSTUS stop_codon 3388 3390 . + 0 transcript_id "g273.t1"; gene_id "g273"; # protein sequence = [MTFLNGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHAQARRVWKNYLPA # INGIVFLVDCADHPRLMESKTELDALMTDETIGNVPILILGNKIDRPEAISEEKLREMFGLYGQTTGKGSTPMKELNTRPLEVFMCSVKMRQGYGEGF # RWLSQYID] # end gene g273 ### # # ----- sequence number 266 (length = 5182, name = scaffold_27_6258134-6263315) ----- # # annotation: # Sequence scaffold_27_6258134-6263315 length=5182 scaffold_27_6258134-6263315 database start_codon 601 603 . + 0 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database intron 797 1100 . + . transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database intron 1317 1732 . + . transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database intron 2000 2153 . + . transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database intron 2262 2440 . + . transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database intron 2663 3475 . + . transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database intron 3733 4438 . + . transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 601 796 . + 0 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 1101 1316 . + 2 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 1733 1999 . + 2 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 2154 2261 . + 2 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 2441 2662 . + 2 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 3476 3732 . + 2 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database CDS 4439 4582 . + 0 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; scaffold_27_6258134-6263315 database stop_codon 4580 4582 . + 0 transcript_id "g_1873-T1.1"; gene_id "g_1873-T1"; # Predicted genes for sequence number 266 on both strands # start gene g274 scaffold_27_6258134-6263315 AUGUSTUS gene 1 4582 0.26 + . g274 scaffold_27_6258134-6263315 AUGUSTUS transcript 1 4582 0.26 + . g274.t1 scaffold_27_6258134-6263315 AUGUSTUS intron 1 519 0.94 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS intron 797 1100 1 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS intron 1359 1732 0.44 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS intron 2000 2153 1 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS intron 2262 2440 1 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS intron 2663 3475 1 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS intron 3733 4438 0.61 + . transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 520 796 0.94 + 0 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 1101 1358 0.44 + 2 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 1733 1999 1 + 2 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 2154 2261 1 + 2 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 2441 2662 1 + 2 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 3476 3732 0.61 + 2 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS CDS 4439 4582 0.74 + 0 transcript_id "g274.t1"; gene_id "g274"; scaffold_27_6258134-6263315 AUGUSTUS stop_codon 4580 4582 . + 0 transcript_id "g274.t1"; gene_id "g274"; # protein sequence = [PDGQPAVQPARQLASRTASQPDRQPANMHSTTSITSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGA # MEELERALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALDCCEFPFGSKQKDICINPYHYRRVETPGSAGAGGGWAGG # WVVLPPVLVPRHSEFNPQHSLLAKFRNASLHNEPLMPQNATYPDSFPALPCSTFSSSPSSSSSLTQSPGSHSYPNSPSSAAEPGGSPYHITETPPPPY # SMMETGPQEDVKPGDTANTNKLTFSAPHRDLRPVCYEEPQYWCSVAYYELNNRVGETFHASSRSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIEHTR # RHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYQHGFHATTVCKIPSGCSLKIFNNQLFAQLLSQSVNHGFEVVYELTKMCTIRMSFVKGWGAEYH # RQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPHNPISSVS] # end gene g274 ### # # ----- sequence number 267 (length = 3977, name = scaffold_27_7446517-7450493) ----- # # annotation: # Sequence scaffold_27_7446517-7450493 length=3977 scaffold_27_7446517-7450493 database start_codon 601 603 . + 0 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database intron 826 1693 . + . transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database intron 1825 1919 . + . transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database intron 2002 2238 . + . transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database intron 2353 2618 . + . transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database intron 2737 3282 . + . transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database CDS 601 825 . + 0 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database CDS 1694 1824 . + 0 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database CDS 1920 2001 . + 1 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database CDS 2239 2352 . + 0 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database CDS 2619 2736 . + 0 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database CDS 3283 3377 . + 2 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; scaffold_27_7446517-7450493 database stop_codon 3375 3377 . + 0 transcript_id "g_1878-T1.1"; gene_id "g_1878-T1"; # Predicted genes for sequence number 267 on both strands # start gene g275 scaffold_27_7446517-7450493 AUGUSTUS gene 601 3377 0.2 + . g275 scaffold_27_7446517-7450493 AUGUSTUS transcript 601 3377 0.2 + . g275.t1 scaffold_27_7446517-7450493 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS intron 826 1693 0.28 + . transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS intron 1825 1919 0.81 + . transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS intron 2002 2238 0.99 + . transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS intron 2353 2618 0.6 + . transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS intron 2737 3282 0.97 + . transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS CDS 601 825 1 + 0 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS CDS 1694 1824 0.79 + 0 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS CDS 1920 2001 0.81 + 1 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS CDS 2239 2352 0.6 + 0 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS CDS 2619 2736 0.6 + 0 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS CDS 3283 3377 0.97 + 2 transcript_id "g275.t1"; gene_id "g275"; scaffold_27_7446517-7450493 AUGUSTUS stop_codon 3375 3377 . + 0 transcript_id "g275.t1"; gene_id "g275"; # protein sequence = [MEGEKEKEPAEEKESDDTGQTGEEEEEEEEGATRSQKASEWADQDQDLPIMHWEDLSLRIAELEKQEEERRERAKSAS # GSELLAGPEGRTEERRGVERRESWEDEVQPRSCRVAVVTSRFSHQKNLQLCYINNSESDEDEEGAGKEGSTGANSNGYHPSGLKQEVKVALRALRDKL # WAEQKEKEHLASCTPVTRRTHLDPCDLRLCSVQDLLSLTVSLGQEVHDLSSELVSHLLERDQLRTKQDAMLLDVQDLT] # end gene g275 ### # # ----- sequence number 268 (length = 5141, name = scaffold_27_9917289-9922429) ----- # # annotation: # Sequence scaffold_27_9917289-9922429 length=5141 scaffold_27_9917289-9922429 database start_codon 355 357 . + 0 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database intron 418 800 . + . transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database intron 932 1064 . + . transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database intron 1163 3265 . + . transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database intron 3328 3630 . + . transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database intron 3706 4439 . + . transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database CDS 355 417 . + 0 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database CDS 801 931 . + 0 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database CDS 1065 1162 . + 1 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database CDS 3266 3327 . + 2 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database CDS 3631 3705 . + 0 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database CDS 4440 4541 . + 0 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; scaffold_27_9917289-9922429 database stop_codon 4539 4541 . + 0 transcript_id "g_1884-T1.1"; gene_id "g_1884-T1"; # Predicted genes for sequence number 268 on both strands # start gene g276 scaffold_27_9917289-9922429 AUGUSTUS gene 803 1930 0.11 - . g276 scaffold_27_9917289-9922429 AUGUSTUS transcript 803 1930 0.11 - . g276.t1 scaffold_27_9917289-9922429 AUGUSTUS stop_codon 803 805 . - 0 transcript_id "g276.t1"; gene_id "g276"; scaffold_27_9917289-9922429 AUGUSTUS intron 883 1060 0.45 - . transcript_id "g276.t1"; gene_id "g276"; scaffold_27_9917289-9922429 AUGUSTUS intron 1747 1892 0.26 - . transcript_id "g276.t1"; gene_id "g276"; scaffold_27_9917289-9922429 AUGUSTUS CDS 803 882 0.94 - 2 transcript_id "g276.t1"; gene_id "g276"; scaffold_27_9917289-9922429 AUGUSTUS CDS 1061 1746 0.13 - 1 transcript_id "g276.t1"; gene_id "g276"; scaffold_27_9917289-9922429 AUGUSTUS CDS 1893 1930 0.61 - 0 transcript_id "g276.t1"; gene_id "g276"; scaffold_27_9917289-9922429 AUGUSTUS start_codon 1928 1930 . - 0 transcript_id "g276.t1"; gene_id "g276"; # protein sequence = [MRSIQALTLPQVIPNPTTGYLPDANPTTNYVFNTNPNPTTGYVPNASPNPTTGYVLDANPHPTTGYVPDANPHPTTGY # VPDANPNPTTGYVLDASWKGDKSGEDVSAEDVSGEDVSVEDVSVEDVSGEDVSEEDISGQDVSGEHVFGEDVSREDVSGEVKSGEDVSGEDVFGEDVS # EEDVSGEDVSGEDVFGEDVSGEDVSGEDGSLPVSLQLLRPWISPRSLASSSSRSLFLVSSSCNRLAVLGEHATSLFSGEPGESSASLSCHT] # end gene g276 ### # start gene g277 scaffold_27_9917289-9922429 AUGUSTUS gene 2281 4026 0.84 + . g277 scaffold_27_9917289-9922429 AUGUSTUS transcript 2281 4026 0.84 + . g277.t1 scaffold_27_9917289-9922429 AUGUSTUS start_codon 2281 2283 . + 0 transcript_id "g277.t1"; gene_id "g277"; scaffold_27_9917289-9922429 AUGUSTUS intron 2333 3265 0.94 + . transcript_id "g277.t1"; gene_id "g277"; scaffold_27_9917289-9922429 AUGUSTUS intron 3328 3630 0.94 + . transcript_id "g277.t1"; gene_id "g277"; scaffold_27_9917289-9922429 AUGUSTUS CDS 2281 2332 0.94 + 0 transcript_id "g277.t1"; gene_id "g277"; scaffold_27_9917289-9922429 AUGUSTUS CDS 3266 3327 0.94 + 2 transcript_id "g277.t1"; gene_id "g277"; scaffold_27_9917289-9922429 AUGUSTUS CDS 3631 4026 0.84 + 0 transcript_id "g277.t1"; gene_id "g277"; scaffold_27_9917289-9922429 AUGUSTUS stop_codon 4024 4026 . + 0 transcript_id "g277.t1"; gene_id "g277"; # protein sequence = [MSEPCLLENKLEPVDISELCICSSPLCLPAHCVDIAWHMKTAPPACHYPLVIPLHRHLLLFHRVKIPHHILLYKIPHH # ILLYKISQHILLYKIPQHILLLYKIPHHILLYKIPHHILLLYKIPHHILLLYKIPHHILLLYKIPHHILLLYKIPHHILLLYKIPHHILLY] # end gene g277 ### # # ----- sequence number 269 (length = 2578, name = scaffold_28_2574395-2576972) ----- # # annotation: # Sequence scaffold_28_2574395-2576972 length=2578 scaffold_28_2574395-2576972 database start_codon 601 603 . + 0 transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database intron 703 886 . + . transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database intron 994 1102 . + . transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database intron 1217 1707 . + . transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database CDS 601 702 . + 0 transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database CDS 887 993 . + 0 transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database CDS 1103 1216 . + 1 transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database CDS 1708 1978 . + 1 transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; scaffold_28_2574395-2576972 database stop_codon 1976 1978 . + 0 transcript_id "g_1902-T1.1"; gene_id "g_1902-T1"; # Predicted genes for sequence number 269 on both strands # start gene g278 scaffold_28_2574395-2576972 AUGUSTUS gene 680 1978 0.98 + . g278 scaffold_28_2574395-2576972 AUGUSTUS transcript 680 1978 0.98 + . g278.t1 scaffold_28_2574395-2576972 AUGUSTUS start_codon 680 682 . + 0 transcript_id "g278.t1"; gene_id "g278"; scaffold_28_2574395-2576972 AUGUSTUS intron 703 1102 0.98 + . transcript_id "g278.t1"; gene_id "g278"; scaffold_28_2574395-2576972 AUGUSTUS intron 1217 1707 1 + . transcript_id "g278.t1"; gene_id "g278"; scaffold_28_2574395-2576972 AUGUSTUS CDS 680 702 1 + 0 transcript_id "g278.t1"; gene_id "g278"; scaffold_28_2574395-2576972 AUGUSTUS CDS 1103 1216 0.98 + 1 transcript_id "g278.t1"; gene_id "g278"; scaffold_28_2574395-2576972 AUGUSTUS CDS 1708 1978 1 + 1 transcript_id "g278.t1"; gene_id "g278"; scaffold_28_2574395-2576972 AUGUSTUS stop_codon 1976 1978 . + 0 transcript_id "g278.t1"; gene_id "g278"; # protein sequence = [MEQVFKSSVKCSQKTIKDAYHVICTPCSMQLEVCAKCGKKEDIVIPVNTPEGEEEEEEDNNAQKTKELGLKKKKKKKK # EEEEELDDEMDSDDDFGNPGSDDDDEEEEDDGSGGDKPKEAGDKAGIPDMARVCVQD] # end gene g278 ### # # ----- sequence number 270 (length = 4643, name = scaffold_28_3842515-3847157) ----- # # annotation: # Sequence scaffold_28_3842515-3847157 length=4643 scaffold_28_3842515-3847157 database start_codon 601 603 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database intron 774 1458 . + . transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database intron 1622 1995 . + . transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database intron 2089 2526 . + . transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database intron 2668 3027 . + . transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database intron 3166 3551 . + . transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database intron 3672 3857 . + . transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 601 773 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 1459 1621 . + 1 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 1996 2088 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 2527 2667 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 3028 3165 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 3552 3671 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database CDS 3858 4043 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; scaffold_28_3842515-3847157 database stop_codon 4041 4043 . + 0 transcript_id "g_1917-T1.1"; gene_id "g_1917-T1"; # Predicted genes for sequence number 270 on both strands # start gene g279 scaffold_28_3842515-3847157 AUGUSTUS gene 601 4043 0.88 + . g279 scaffold_28_3842515-3847157 AUGUSTUS transcript 601 4043 0.88 + . g279.t1 scaffold_28_3842515-3847157 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS intron 774 1458 0.98 + . transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS intron 1622 1995 0.99 + . transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS intron 2089 2526 0.99 + . transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS intron 2668 3027 1 + . transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS intron 3166 3551 1 + . transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS intron 3672 3857 1 + . transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 601 773 0.89 + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 1459 1621 0.98 + 1 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 1996 2088 0.99 + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 2527 2667 1 + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 3028 3165 1 + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 3552 3671 1 + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS CDS 3858 4043 1 + 0 transcript_id "g279.t1"; gene_id "g279"; scaffold_28_3842515-3847157 AUGUSTUS stop_codon 4041 4043 . + 0 transcript_id "g279.t1"; gene_id "g279"; # protein sequence = [MSDQSAFDTDVWTLTRFVMETGRKVKGSTGELTQLINSMLTAIKAISSAVRKAGLAHLQGMAGKVNVTGDDVKKLDVL # SNDLVINMLQASFGTCVMVSEENKEIIITPKDKRGKYVVCFDPLDGSSNIDCLASIGTIFAIYKRLSEGEPTVEDALQPGKEIVCAGYALYGSATLVA # LSHGAGLNFFMLDPAIGEFILTEKNVQMKKKGKVYSLNEGYAKYFHPSINEYLKHKKYPEDGSEPYGARYVGSMVSDIHRTIAYGGIFMYPANEKSPK # GKLRLLYECNPIAFLIEQAGGLATTGTQRILDVKPESIHQRVPFVVGSSDDVNEYLSFVKKHS] # end gene g279 ### # # ----- sequence number 271 (length = 13222, name = scaffold_28_5016334-5029555) ----- # # annotation: # Sequence scaffold_28_5016334-5029555 length=13222 scaffold_28_5016334-5029555 database start_codon 601 603 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 717 1420 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 1593 1808 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 2292 2518 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 6821 6941 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 7038 7163 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 7383 7695 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 7719 7792 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 7915 8067 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 8203 8292 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 8440 8633 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 8782 10505 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 10640 11275 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 11373 12118 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database intron 12296 12378 . + . transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 601 716 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 1421 1592 . + 1 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 1809 2291 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 2519 6820 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 6942 7037 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 7164 7382 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 7696 7718 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 7793 7914 . + 1 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 8068 8202 . + 2 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 8293 8439 . + 2 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 8634 8781 . + 2 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 10506 10639 . + 1 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 11276 11372 . + 2 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 12119 12295 . + 1 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database CDS 12379 12622 . + 1 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; scaffold_28_5016334-5029555 database stop_codon 12620 12622 . + 0 transcript_id "g_1928-T1.1"; gene_id "g_1928-T1"; # Predicted genes for sequence number 271 on both strands # start gene g280 scaffold_28_5016334-5029555 AUGUSTUS gene 601 12622 0.18 + . g280 scaffold_28_5016334-5029555 AUGUSTUS transcript 601 12622 0.18 + . g280.t1 scaffold_28_5016334-5029555 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 717 1420 0.99 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 1593 1808 0.99 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 2292 2518 0.9 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 6821 6941 0.99 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 7038 7163 1 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 7383 7695 1 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 7719 7792 1 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 7915 8067 1 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 8203 8292 1 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 8440 8633 0.98 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 8782 9209 0.57 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 9286 9696 0.7 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 9795 10505 0.82 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 10640 11275 1 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 11373 12118 0.93 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS intron 12296 12378 0.48 + . transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 601 716 1 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 1421 1592 1 + 1 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 1809 2291 0.9 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 2519 6820 0.94 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 6942 7037 1 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 7164 7382 1 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 7696 7718 1 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 7793 7914 1 + 1 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 8068 8202 1 + 2 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 8293 8439 1 + 2 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 8634 8781 0.97 + 2 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 9210 9285 0.52 + 1 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 9697 9794 0.7 + 0 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 10506 10639 1 + 1 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 11276 11372 1 + 2 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 12119 12295 0.93 + 1 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS CDS 12379 12622 0.52 + 1 transcript_id "g280.t1"; gene_id "g280"; scaffold_28_5016334-5029555 AUGUSTUS stop_codon 12620 12622 . + 0 transcript_id "g280.t1"; gene_id "g280"; # protein sequence = [MEESDSVESEVTELQELQCESPEAIVLDDEDEVEELHNSLREAVQDPTVKPQMQCLLVDPSFSMVTVQSEDSGIVWET # ASSRCSTPWASEASSPSEVCSLEGTGAGSSGGAQGMITIVFDEEKIIRRRTRSRGTHSRLTEHLRRPVNSRSGSALGAERPEMAEVSVPNVQPEGRES # GELDTLKDKDQQLFRLISEGYEILNIKVPSKLPTLDEEESMELQDNLSYLEQTPRIRSRRPLPPQEQGAEVQEEDGEKQKKASEQYSAEEHTRYMRER # KDGTSDMDYFEKFTLLDVVAPEEHAPDLEEDVGTGSVKETQPEDPKLGKQPASGSLNALEDTFVFVTEVEIASEHLDEVFYGNKESERVEEEEDEEKG # GRRGRRESIKTLKENGSVLFGSQETILTPIFLSPGPPKIIDPILLEEPTAMSFLYSDLYEDSIGEHRKSNEEKSEGENLASEKVFQRRLSDQEEEDGY # LEKFTLKDETPAFESQSEEEEDNGEGTRLWPQSKFEMTGCLTRMVEEKEEEHSERKEEPKREEVTEKNRHLLTVEDTETEERLVEKEEKVEETCPVIG # RPAKLKGKEEKTKPATKEKKEAKEGNLVECTKEQPQKHKKYKTNSNLLDTIIDRESSECEKELLVPAQELVEATGEASSQVELAQVVKTENVSQEEAV # VSGLDSSVSEISIPNQEVTKEKEEVTAIVEEKSPADVPEDLSVAEMESILKPFVELEILSGVLKPGQVEQKDLKDGTVTAPVKQKSKSVSPDIETYTE # TDIDAKKVADVAPLAENSKAGQEEQVPSVETEAMVQPKAVVEPELRVASEAEVQLKPRVGSESVVEKEQRVSSEAVVELEPNVGAEAVIEPEPREEPE # AVVELEPRVGSEAGVEPEAGVLAGIEEAIKAISKAVVEEVVVYAQSKMTAEASEPKGGEDKVIEGTEVRVEAVLQPVGEVLINSTGPVHTDIEGNVEN # KTEIEGKIKTEGDTEDKEGRIENKGKIEKKIEIGEKVQETITETLHSQSAAAEIQEMEIRGMVDPKTMGLPLMHTDSPEGKITQEADKDEGATLGDQS # VQSIGEKEDTVKALDLQDPLTAGAEDDRAETLAEDIKEGEEIMETVKVKGREGGKETVDVKGKEGVKEIVESEGMTTAPSVAPVLLQEQTQVRLEDYD # PEVISEREDQPSAPLDTQERWPTPPTPLVEGEDQEAKQTIEGDFETNAGFLSTPMSFTPHEELSGQYIEAVCAETKLHPKAVSPETEIQQEAVSPVAE # VHQMPLSPVTEIHQEAVSLVTEMQQDVVSPETEIQQEAVSPVTEIHQEAVSPVAEVHQMPLSSVTEIRQEAVSLVTEMQQEDVSPETEIQQEAVSPVA # EVHQKAVSLVTEVHQETVSPVTEMHQEAVSPVTEVHQEVVSPETEVPQEAVSPVTEMQQEAESPVAEVHQRAVSPVTEVHQKAVCPVTEMHQETVSPV # TEIQQEAVSPVTEVHQRAVSPVTEVHQEAMSPVTEVHQKAVSPVTEMHQETVSPVTEMHQETVSPVTEIRQGAVSPVTEVHQKAVSPVTEVHQKAVSP # VTDTHQEAMSPVTEVHQETATPVMELHQEVNLLEELEYEMISQQEAREQGCLLPHSSLERRKEEMEEWKEGVLDLTPEEDLIEEDYEMFDDVEESQAR # AAADLEGMDWFCVGCGCLLTKEGHASGGHQAHKIISVDQAYNDERDKLNCRISELQERSENIEDLVSELELSYNTIEEQFQTREEAMQEQNEKMLAGV # MEQYTNMSLGMEEEKKSKLEQLYDQIVSFQESIDTARAMLETTAREVDTDARSISDINTRLSSVLQSAMSLELGPRGLLVFEDYAKGNAANTHTHRKG # IPVPQQPFLQSQEPGSASSTSVTVYWRVNPGDIIDCFQVYCIEDPHEAVSEEYRVTVKESYCVLEDLDPEKGYKVWVMAVNYTGCSLPSRRLTFRTAP # PVPVIDTERCTVLWNSAVLRWSPANQMHTPMYTLEYCRQYALEGEGLSHSPSLGVTAPSAPMTTGTTVVFTFKIWASKALVPKACSCAAMSSTSVLSF # SPALSSHWSISGIRSQEQQVQLQPDENYLFYIKAVNEAGASEQSEATLISTRGTRFRLLQESAQPGVQLSENQKTLVYRHSDTHLCPSVLGELLPAIG # HYYWETVVTGSPGYRIGVAYGGTNRDSPLGENNTSWCLHCIPTPSSCRFEMLHASVQADVFVVEVPERVGTLLDYEHQCLSFYNAQTGQLLGTLTHPF # ILPCHPVLGIEQLGSLGLSMVLEVPEFT] # end gene g280 ### # # ----- sequence number 272 (length = 1849, name = scaffold_28_7156174-7158022) ----- # # annotation: # Sequence scaffold_28_7156174-7158022 length=1849 scaffold_28_7156174-7158022 database start_codon 601 603 . + 0 transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; scaffold_28_7156174-7158022 database intron 678 818 . + . transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; scaffold_28_7156174-7158022 database intron 944 1052 . + . transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; scaffold_28_7156174-7158022 database CDS 601 677 . + 0 transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; scaffold_28_7156174-7158022 database CDS 819 943 . + 1 transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; scaffold_28_7156174-7158022 database CDS 1053 1249 . + 2 transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; scaffold_28_7156174-7158022 database stop_codon 1247 1249 . + 0 transcript_id "g_1937-T1.1"; gene_id "g_1937-T1"; # Predicted genes for sequence number 272 on both strands # start gene g281 scaffold_28_7156174-7158022 AUGUSTUS gene 1 1249 0.96 + . g281 scaffold_28_7156174-7158022 AUGUSTUS transcript 1 1249 0.96 + . g281.t1 scaffold_28_7156174-7158022 AUGUSTUS intron 65 449 0.96 + . transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS intron 678 818 1 + . transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS intron 944 1052 1 + . transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS CDS 1 64 0.96 + 2 transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS CDS 450 677 1 + 1 transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS CDS 819 943 1 + 1 transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS CDS 1053 1249 1 + 2 transcript_id "g281.t1"; gene_id "g281"; scaffold_28_7156174-7158022 AUGUSTUS stop_codon 1247 1249 . + 0 transcript_id "g281.t1"; gene_id "g281"; # protein sequence = [QLVANNPDWIFISPFDDPLIWEGHTSLVEELESQLPVKPGAVVLSVGGGGLLNGVVEGLRRAGWEDVPIVAMETVGAH # SLNAAMKAGKLVTLPEITSIATTLGLTRVSAQTLKLVGEHTVFSELVTDQEAVNAVERFVDDEKILVEPACGAALAAVYCDIVGRLQKEGKLAKDLGP # VVVVVCGGNNISIEQLWRLKKQLGMSS] # end gene g281 ### # # ----- sequence number 273 (length = 8402, name = scaffold_28_9448255-9456656) ----- # # annotation: # Sequence scaffold_28_9448255-9456656 length=8402 scaffold_28_9448255-9456656 database start_codon 601 603 . + 0 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database intron 617 2407 . + . transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database intron 2576 2915 . + . transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database intron 3056 5489 . + . transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database intron 5592 5989 . + . transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database intron 6171 6979 . + . transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database intron 7269 7495 . + . transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 601 616 . + 0 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 2408 2575 . + 2 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 2916 3055 . + 2 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 5490 5591 . + 0 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 5990 6170 . + 0 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 6980 7268 . + 2 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database CDS 7496 7802 . + 1 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; scaffold_28_9448255-9456656 database stop_codon 7800 7802 . + 0 transcript_id "g_1954-T1.1"; gene_id "g_1954-T1"; # Predicted genes for sequence number 273 on both strands # start gene g282 scaffold_28_9448255-9456656 AUGUSTUS gene 601 4449 0.18 + . g282 scaffold_28_9448255-9456656 AUGUSTUS transcript 601 4449 0.18 + . g282.t1 scaffold_28_9448255-9456656 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS intron 617 2407 0.31 + . transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS intron 2576 2915 0.99 + . transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS intron 3126 3895 0.6 + . transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS intron 4157 4315 0.9 + . transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS CDS 601 616 0.35 + 0 transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS CDS 2408 2575 0.87 + 2 transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS CDS 2916 3125 0.66 + 2 transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS CDS 3896 4156 0.76 + 2 transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS CDS 4316 4449 0.9 + 2 transcript_id "g282.t1"; gene_id "g282"; scaffold_28_9448255-9456656 AUGUSTUS stop_codon 4447 4449 . + 0 transcript_id "g282.t1"; gene_id "g282"; # protein sequence = [MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCAACYEGGATTTRHTTEHPMQCILTRVDFDLYYGGEALSVEQPQAY # TCPFCGRMGHTESSLQEHVAGEHADTSTEVVSTAGDTPAHTDPRHHHTLTPDTSVSCDACLKGNFRGRRYKCLICYDYDLCAACYEGGATTTRHTTEH # PMQCILTRVDFGRLGALALVGATTTRHTTEHPMHCILTRVDFGPSRPLLLPSSLPALHFPNRPSLPPSLFIPSLPGTLPDCNLLWE] # end gene g282 ### # start gene g283 scaffold_28_9448255-9456656 AUGUSTUS gene 4514 5654 0.74 + . g283 scaffold_28_9448255-9456656 AUGUSTUS transcript 4514 5654 0.74 + . g283.t1 scaffold_28_9448255-9456656 AUGUSTUS start_codon 4514 4516 . + 0 transcript_id "g283.t1"; gene_id "g283"; scaffold_28_9448255-9456656 AUGUSTUS intron 4583 5489 0.84 + . transcript_id "g283.t1"; gene_id "g283"; scaffold_28_9448255-9456656 AUGUSTUS CDS 4514 4582 0.74 + 0 transcript_id "g283.t1"; gene_id "g283"; scaffold_28_9448255-9456656 AUGUSTUS CDS 5490 5654 0.85 + 0 transcript_id "g283.t1"; gene_id "g283"; scaffold_28_9448255-9456656 AUGUSTUS stop_codon 5652 5654 . + 0 transcript_id "g283.t1"; gene_id "g283"; # protein sequence = [MGHTESSLQEHVAGEHADTSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLISFTSTAPCWKPAGLQHPGF] # end gene g283 ### # start gene g284 scaffold_28_9448255-9456656 AUGUSTUS gene 6023 7802 0.48 + . g284 scaffold_28_9448255-9456656 AUGUSTUS transcript 6023 7802 0.48 + . g284.t1 scaffold_28_9448255-9456656 AUGUSTUS start_codon 6023 6025 . + 0 transcript_id "g284.t1"; gene_id "g284"; scaffold_28_9448255-9456656 AUGUSTUS intron 6195 6979 0.53 + . transcript_id "g284.t1"; gene_id "g284"; scaffold_28_9448255-9456656 AUGUSTUS intron 7269 7495 1 + . transcript_id "g284.t1"; gene_id "g284"; scaffold_28_9448255-9456656 AUGUSTUS CDS 6023 6194 0.68 + 0 transcript_id "g284.t1"; gene_id "g284"; scaffold_28_9448255-9456656 AUGUSTUS CDS 6980 7268 0.9 + 2 transcript_id "g284.t1"; gene_id "g284"; scaffold_28_9448255-9456656 AUGUSTUS CDS 7496 7802 1 + 1 transcript_id "g284.t1"; gene_id "g284"; scaffold_28_9448255-9456656 AUGUSTUS stop_codon 7800 7802 . + 0 transcript_id "g284.t1"; gene_id "g284"; # protein sequence = [MFHPGRGLGGQRARRSNMHFTSTSTGGLSNTQNSSQSSNYNREAMDPIAGQKHSLIAELLSQLSGVRRSAGGQMSSGP # SASQLQQLQMQLQLERQQAQAARQQLDTARGAPRAAPTRAAIGTANSNTSSNANPCPHPSSHEHSTHAGHNFLLNRLSEPRLSEVDLQESESGWADRG # LFVTELLLSTLLPEHNAPAARHRAGPLRGFAGPLRGFADFGPMGCMDVMTLEVALENLNLREATANTVKKQPPPPLPPR] # end gene g284 ### # # ----- sequence number 274 (length = 3950, name = scaffold_39_13123-17072) ----- # # annotation: # Sequence scaffold_39_13123-17072 length=3950 scaffold_39_13123-17072 database start_codon 601 603 . + 0 transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; scaffold_39_13123-17072 database intron 734 1049 . + . transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; scaffold_39_13123-17072 database intron 2206 3163 . + . transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; scaffold_39_13123-17072 database CDS 601 733 . + 0 transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; scaffold_39_13123-17072 database CDS 1050 2205 . + 2 transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; scaffold_39_13123-17072 database CDS 3164 3350 . + 1 transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; scaffold_39_13123-17072 database stop_codon 3348 3350 . + 0 transcript_id "g_2052-T1.1"; gene_id "g_2052-T1"; # Predicted genes for sequence number 274 on both strands # start gene g285 scaffold_39_13123-17072 AUGUSTUS gene 601 3692 0.98 + . g285 scaffold_39_13123-17072 AUGUSTUS transcript 601 3692 0.98 + . g285.t1 scaffold_39_13123-17072 AUGUSTUS start_codon 601 603 . + 0 transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS intron 734 1049 1 + . transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS intron 2206 3163 0.99 + . transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS intron 3343 3498 0.99 + . transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS CDS 601 733 1 + 0 transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS CDS 1050 2205 1 + 2 transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS CDS 3164 3342 0.99 + 1 transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS CDS 3499 3692 0.99 + 2 transcript_id "g285.t1"; gene_id "g285"; scaffold_39_13123-17072 AUGUSTUS stop_codon 3690 3692 . + 0 transcript_id "g285.t1"; gene_id "g285"; # protein sequence = [MLASTLRKKVPLVRMVDLIIPSPQLASQSGDERGAESSERQHLIGDGQTDWMTEKVDLSSFVSTTESSPSSSLPPSPL # EQDVKVPSDLEVMTSLLQEELAQLEDYFRSESSATKLEKSSKCDRTAQNMGSQSYYQLPYNSYSTSQSETSPVVVTLATGELDLAGFCGGPIARPKMP # RPAPYSYHRYHNNSRRMAPESVKVGQEVGHELWSSKGSYSGSPESHYPTLKTSVKSIASVKKVRECALMLKEEESYCFSEGMFCSEEIARGFCMGGSF # DSHKREGQLMHGSTKVGAAYDAPGIEVLHCNKDGGLPGAVSAAQEQLGAEGYFHQSLATAEPYHSFIAELEQPTQAHAVEPVHAHYLYPECLSDQSYE # CLSRGGGAEGPMVGSPLQRPPPPRLKDDTVLLATPPLEPPTGERRQKKRDQNKTAAHRYRVRKRAELDSLEEELHGLEGQNRELRDKAESVEREIQYV # KDLLIEVYKARSQRLKQDGREDNSTQTPFRNVYLGGQIQSHQGEEGNPGHVRYHCDNLTQAHSLVTMEAELAVSGRLHKLSGQ] # end gene g285 ### # # ----- sequence number 275 (length = 2734, name = scaffold_194_326-3059) ----- # # annotation: # Sequence scaffold_194_326-3059 length=2734 scaffold_194_326-3059 database start_codon 601 603 . + 0 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database intron 679 1023 . + . transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database intron 1151 1503 . + . transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database intron 1599 1674 . + . transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database intron 1856 2021 . + . transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database CDS 601 678 . + 0 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database CDS 1024 1150 . + 0 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database CDS 1504 1598 . + 2 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database CDS 1675 1855 . + 0 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database CDS 2022 2134 . + 2 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; scaffold_194_326-3059 database stop_codon 2132 2134 . + 0 transcript_id "g_1257-T1.1"; gene_id "g_1257-T1"; # Predicted genes for sequence number 275 on both strands # start gene g286 scaffold_194_326-3059 AUGUSTUS gene 1 2134 0.94 + . g286 scaffold_194_326-3059 AUGUSTUS transcript 1 2134 0.94 + . g286.t1 scaffold_194_326-3059 AUGUSTUS intron 1 580 0.98 + . transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS intron 679 1023 1 + . transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS intron 1151 1503 0.96 + . transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS intron 1599 1674 1 + . transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS intron 1856 2021 1 + . transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS CDS 581 678 1 + 2 transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS CDS 1024 1150 0.96 + 0 transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS CDS 1504 1598 1 + 2 transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS CDS 1675 1855 1 + 0 transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS CDS 2022 2134 1 + 2 transcript_id "g286.t1"; gene_id "g286"; scaffold_194_326-3059 AUGUSTUS stop_codon 2132 2134 . + 0 transcript_id "g286.t1"; gene_id "g286"; # protein sequence = [LDLLSKMAPPRVIKTHLPFQLVPEGFWENKRKIIYIARNAKDNCVSYYHFDRMSLIHPEPGPWDGYLHKFMRGQLGWG # SWYDHVKGYWQERERKNILYLFYEDMKENPRREVERIMRYLDLSLSDDVISRIVELTSFKAMKENPMANYSSIPKLVFDQSISPFMRKGEVGDWKNHF # SPEQSQVFDADYERQMKNTNIPFRFSI] # end gene g286 ### a-posteriori probability of viterbi path ---------------------------------------- a-posteriori probability of correct path 275 times were the paths equally likely (identical). sorted quotients of the rest: 0 quotients were between 1 and 10 ******* Evaluation of gene prediction ******* ---------------------------------------------\ | sensitivity | specificity | ---------------------------------------------| nucleotide level | 0.925 | 0.918 | ---------------------------------------------/ ----------------------------------------------------------------------------------------------------------\ | #pred | #anno | | FP = false pos. | FN = false neg. | | | | total/ | total/ | TP |--------------------|--------------------| sensitivity | specificity | | unique | unique | | part | ovlp | wrng | part | ovlp | wrng | | | ----------------------------------------------------------------------------------------------------------| | | | | 318 | 370 | | | exon level | 1995 | 2047 | 1677 | ------------------ | ------------------ | 0.819 | 0.841 | | 1995 | 2047 | | 162 | 13 | 143 | 161 | 12 | 197 | | | ----------------------------------------------------------------------------------------------------------/ ----------------------------------------------------------------------------\ transcript | #pred | #anno | TP | FP | FN | sensitivity | specificity | ----------------------------------------------------------------------------| gene level | 286 | 275 | 73 | 213 | 202 | 0.265 | 0.255 | ----------------------------------------------------------------------------/ ------------------------------------------------------------------------\ UTR | total pred | CDS bnd. corr. | meanDiff | medianDiff | ------------------------------------------------------------------------| TSS | 67 | 0 | -1 | -1 | TTS | 5 | 0 | -1 | -1 | ------------------------------------------------------------------------| UTR | uniq. pred | unique anno | sens. | spec. | ------------------------------------------------------------------------| | true positive = 1 bound. exact, 1 bound. <= 20bp off | UTR exon level | 0 | 0 | -nan | -nan | ------------------------------------------------------------------------| UTR base level | 0 | 0 | -nan | -nan | ------------------------------------------------------------------------/ nucUTP= 0 nucUFP=0 nucUFPinside= 0 nucUFN=0 # total time: 51.8 # command line: # augustus --AUGUSTUS_CONFIG_PATH=/suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/ab_initio_parameters/augustus --species=species_name /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/augustus.training.pasa.gb.test