-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_968

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1839, 1996
Couldn't classify 2596, 2636
Sorry, prediction snap_scaffold_968-snap.1-T1 fails validation.
(GGA)	 AG	1839-1996	GT	GGG
(AGT)	 AG	2069-2110	GT	CGG
(CAC)	 AG	2596-2636	GT	TGG
-recovered snap_scaffold_968-snap.1-T1, internal, 1839, 1996
-recovered snap_scaffold_968-snap.1-T1, internal, 2069, 2110
-recovered snap_scaffold_968-snap.1-T1, internal, 2596, 2636

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60873-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3772
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support