-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_9/scaffold_9_16554454-16855348

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_23657-T1
Valid prediction for snap_scaffold_9-snap.3379-T1
Couldn't classify 32730, 32801
Couldn't classify 34011, 34165
Sorry, prediction pasa_asmbl_54609.p2 fails validation.
(GAG)	 TG	32730-32801	GT	GGG
(GAC)	 AG	33082-33206	GT	AAG
(GTA)	 AG	33300-33382	GT	CAG
(ATG)	 AG	33545-33656	GT	CGG
(ATG)	 AG	33816-33877	GT	TGG
(CCC)	 AG	34011-34165	GG	TGG
add_exon() Sorry, pasa_asmbl_54609.p2 33545-33656-initial-1 is invalid.
-recovered pasa_asmbl_54609.p2, initial, 33545, 33656
-recovered pasa_asmbl_54609.p2, initial, 33816, 33877
-recovered pasa_asmbl_54609.p2, internal, 33082, 33206
-recovered pasa_asmbl_54609.p2, internal, 33300, 33382
-recovered pasa_asmbl_54609.p2, internal, 33545, 33656
-recovered pasa_asmbl_54609.p2, internal, 33816, 33877
Valid prediction for snap_scaffold_9-snap.3381-T1
Valid prediction for Augustus_model.g15734.t1
Valid prediction for CodingQuarry_transcript_62443-T1
Valid prediction for GlimmerHMM_glimmerT_23660-T1
Valid prediction for Augustus_model.g15749.t1
Valid prediction for pasa_asmbl_54604.p1
Valid prediction for Augustus_model.g15750.t1
Couldn't classify 34315, 34421
Sorry, prediction pasa_asmbl_54610.p1 fails validation.
(TTT)	 CG	34315-34421	GT	AGG
(GCG)	 AG	34534-34659	GT	AAG
(TAA)	 AG	34767-34836	GT	AGG
(GAT)	 AG	34951-35004	GT	AGG
(AAC)	 AG	35299-35424	GT	CCG
(GAC)	 AG	35513-35665	GT	AGG
(ATT)	 AG	36138-36319	GT	AGG
(TCA)	 AG	36442-36614	GT	TGG
(ACT)	 AG	36723-36872	GT	AGG
(CTG)	 AG	36985-37146	GT	AGG
(AGA)	 AG	37234-37554	GT	GGG
(GTT)	 AG	37724-37873	GT	AGG
(ATG)	 AG	37968-39400	AG	GAA
-recovered pasa_asmbl_54610.p1, terminal, 37968, 39400
-recovered pasa_asmbl_54610.p1, internal, 34534, 34659
-recovered pasa_asmbl_54610.p1, internal, 34767, 34836
-recovered pasa_asmbl_54610.p1, internal, 34951, 35004
-recovered pasa_asmbl_54610.p1, internal, 35299, 35424
-recovered pasa_asmbl_54610.p1, internal, 35513, 35665
-recovered pasa_asmbl_54610.p1, internal, 36138, 36319
-recovered pasa_asmbl_54610.p1, internal, 36442, 36614
-recovered pasa_asmbl_54610.p1, internal, 36723, 36872
-recovered pasa_asmbl_54610.p1, internal, 36985, 37146
-recovered pasa_asmbl_54610.p1, internal, 37234, 37554
-recovered pasa_asmbl_54610.p1, internal, 37724, 37873
Valid prediction for Augustus_model.g15756.t1
Valid prediction for CodingQuarry_transcript_62450-T1
Valid prediction for pasa_asmbl_54606.p1
Valid prediction for snap_scaffold_9-snap.3371-T1
Couldn't classify 43066, 43191
Sorry, prediction pasa_asmbl_54612.p1 fails validation.
(ATG)	 CC	41410-41559	GT	TGG
(GGT)	 AG	41731-41904	GT	TGG
(GCT)	 AG	42031-42119	GT	AAG
(GCT)	 AG	42222-42308	GT	AGG
(GAG)	 AG	42467-42530	GT	TGG
(AGA)	 AG	42635-42817	GT	TGG
(GTG)	 AG	43066-43191	GA	GGG
-recovered pasa_asmbl_54612.p1, initial, 41410, 41559
-recovered pasa_asmbl_54612.p1, internal, 41731, 41904
-recovered pasa_asmbl_54612.p1, internal, 42031, 42119
-recovered pasa_asmbl_54612.p1, internal, 42222, 42308
-recovered pasa_asmbl_54612.p1, internal, 42467, 42530
-recovered pasa_asmbl_54612.p1, internal, 42635, 42817
Valid prediction for snap_scaffold_9-snap.3372-T1
Couldn't classify 94009, 94545
Sorry, prediction pasa_asmbl_54618.p1 fails validation.
(ATA)	 AC	94009-94545	AA	GCA
Valid prediction for snap_scaffold_9-snap.3380-T1
Valid prediction for Augustus_model.g15739.t1
Valid prediction for GlimmerHMM_glimmerT_23668-T1
Valid prediction for snap_scaffold_9-snap.3405-T1
Valid prediction for Augustus_model.g15736.t1
Valid prediction for HiQ_model.g15747.t1
Valid prediction for GlimmerHMM_glimmerT_23646-T1
Couldn't classify 192254, 192598
Sorry, prediction pasa_asmbl_54624.p1 fails validation.
(ATG)	 TC	192254-192598	TG	CCT
Valid prediction for Augustus_model.g15744.t1
Valid prediction for GlimmerHMM_glimmerT_23640-T1
Valid prediction for GlimmerHMM_glimmerT_23636-T1
Valid prediction for pasa_asmbl_54622.p1
Valid prediction for CodingQuarry_transcript_62441-T1
Valid prediction for snap_scaffold_9-snap.3391-T1
Valid prediction for GlimmerHMM_glimmerT_23669-T1
Valid prediction for CodingQuarry_transcript_62444-T1
Valid prediction for GlimmerHMM_glimmerT_23642-T1
Valid prediction for GlimmerHMM_glimmerT_23665-T1
Valid prediction for snap_scaffold_9-snap.3399-T1
Valid prediction for GlimmerHMM_glimmerT_23634-T1
Valid prediction for snap_scaffold_9-snap.3386-T1
Couldn't classify 192716, 193333
Sorry, prediction pasa_asmbl_54625.p1 fails validation.
(AGG)	 GG	192716-193333	TC	GAT
Valid prediction for snap_scaffold_9-snap.3410-T1
Valid prediction for snap_scaffold_9-snap.3400-T1
Couldn't classify 43399, 43461
Couldn't classify 48093, 48209
Sorry, prediction pasa_asmbl_54613.p1 fails validation.
(AGA)	 GT	43399-43461	GT	CAG
(GAG)	 AG	43845-43897	GT	AGG
(GTT)	 AG	46092-46245	GC	TGG
(GCT)	 AG	46370-46447	GT	AGG
(GAC)	 AG	46608-46815	GT	GGG
(GAA)	 AG	47274-47383	GT	AGG
(CCA)	 AG	47573-47647	GT	AGG
(GTT)	 AG	48093-48209	GT	CGG
-recovered pasa_asmbl_54613.p1, internal, 43845, 43897
-recovered pasa_asmbl_54613.p1, internal, 46092, 46245
-recovered pasa_asmbl_54613.p1, internal, 46370, 46447
-recovered pasa_asmbl_54613.p1, internal, 46608, 46815
-recovered pasa_asmbl_54613.p1, internal, 47274, 47383
-recovered pasa_asmbl_54613.p1, internal, 47573, 47647
-recovered pasa_asmbl_54613.p1, internal, 48093, 48209
Valid prediction for GlimmerHMM_glimmerT_23638-T1
Valid prediction for snap_scaffold_9-snap.3387-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_9-snap.3384-T1
Valid prediction for GlimmerHMM_glimmerT_23641-T1
Valid prediction for snap_scaffold_9-snap.3368-T1
Valid prediction for Augustus_model.g15757.t1
Valid prediction for GlimmerHMM_glimmerT_23644-T1
Valid prediction for Augustus_model.g15743.t1
Valid prediction for HiQ_model.g15735.t1
Valid prediction for GlimmerHMM_glimmerT_23654-T1
Valid prediction for Augustus_model.g15731.t1
Valid prediction for HiQ_model.g15742.t1
Valid prediction for snap_scaffold_9-snap.3414-T1
Valid prediction for snap_scaffold_9-snap.3373-T1
Valid prediction for snap_scaffold_9-snap.3378-T1
Valid prediction for GlimmerHMM_glimmerT_23650-T1
Valid prediction for HiQ_model.g15733.t1
Valid prediction for snap_scaffold_9-snap.3370-T1
Valid prediction for snap_scaffold_9-snap.3417-T1
Valid prediction for snap_scaffold_9-snap.3394-T1
Valid prediction for Augustus_model.g15737.t1
Valid prediction for snap_scaffold_9-snap.3375-T1
Valid prediction for GlimmerHMM_glimmerT_23658-T1
Valid prediction for snap_scaffold_9-snap.3388-T1
Valid prediction for GlimmerHMM_glimmerT_23637-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g15754.t1
Valid prediction for CodingQuarry_transcript_62446-T1
Couldn't classify 161173, 161295
Sorry, prediction pasa_asmbl_55615.p1 fails validation.
(AAG)	 CC	161173-161295	GT	AGG
(GTG)	 AG	161390-161497	GC	AGG
(GAC)	 AG	161876-162043	GT	AGG
(GTT)	 AG	162220-162369	GT	AGG
(GTG)	 AG	163212-163343	GT	AGG
(GTC)	 AG	163442-163552	GT	CGG
(GCC)	 AG	163701-163871	GT	AGG
(GAT)	 AG	164465-164686	GT	AGG
(GAA)	 AG	167608-167645	GT	AGG
(GTT)	 AG	167774-167804	GG	AAG
-recovered pasa_asmbl_55615.p1, terminal, 167774, 167804
-recovered pasa_asmbl_55615.p1, internal, 161390, 161497
-recovered pasa_asmbl_55615.p1, internal, 161876, 162043
-recovered pasa_asmbl_55615.p1, internal, 162220, 162369
-recovered pasa_asmbl_55615.p1, internal, 163212, 163343
-recovered pasa_asmbl_55615.p1, internal, 163442, 163552
-recovered pasa_asmbl_55615.p1, internal, 163701, 163871
-recovered pasa_asmbl_55615.p1, internal, 164465, 164686
-recovered pasa_asmbl_55615.p1, internal, 167608, 167645
Valid prediction for Augustus_model.g15753.t1
Valid prediction for snap_scaffold_9-snap.3389-T1
Valid prediction for Augustus_model.g15741.t1
Valid prediction for snap_scaffold_9-snap.3390-T1
Valid prediction for snap_scaffold_9-snap.3392-T1
Valid prediction for snap_scaffold_9-snap.3383-T1
Couldn't classify 126010, 126011
Sorry, prediction pasa_asmbl_55620.p1 fails validation.
(ATG)	 AC	126010-126011	GT	ATG
(GAG)	 AG	126460-126639	GT	AGG
(GCA)	 AG	126813-126987	AC	AAA
-recovered pasa_asmbl_55620.p1, terminal, 126813, 126987
-recovered pasa_asmbl_55620.p1, internal, 126460, 126639
Valid prediction for snap_scaffold_9-snap.3377-T1
Couldn't classify 144827, 145042
Sorry, prediction pasa_asmbl_55619.p1 fails validation.
(CCT)	 CC	144827-145042	GT	AGG
(CAG)	 AG	145298-145431	GT	AGG
(GAG)	 AG	145693-145753	GT	ATG
(GAT)	 AG	145980-146007	GT	TGG
(AAA)	 AG	146148-146190	GT	AGG
(GGT)	 AG	147012-147081	GT	AGG
(GAA)	 AG	147213-147270	GT	AGG
(CCT)	 AG	147373-147407	TT	AGT
-recovered pasa_asmbl_55619.p1, terminal, 147373, 147407
-recovered pasa_asmbl_55619.p1, internal, 145298, 145431
-recovered pasa_asmbl_55619.p1, internal, 145693, 145753
-recovered pasa_asmbl_55619.p1, internal, 145980, 146007
-recovered pasa_asmbl_55619.p1, internal, 146148, 146190
-recovered pasa_asmbl_55619.p1, internal, 147012, 147081
-recovered pasa_asmbl_55619.p1, internal, 147213, 147270
Valid prediction for GlimmerHMM_glimmerT_23653-T1
Valid prediction for GlimmerHMM_glimmerT_23652-T1
Valid prediction for HiQ_model.g15732.t1
Valid prediction for snap_scaffold_9-snap.3402-T1
Valid prediction for GlimmerHMM_glimmerT_23670-T1
Valid prediction for GlimmerHMM_glimmerT_23647-T1
Valid prediction for GlimmerHMM_glimmerT_23667-T1
Valid prediction for snap_scaffold_9-snap.3395-T1
Valid prediction for snap_scaffold_9-snap.3393-T1
Couldn't classify 88913, 88963
Couldn't classify 91004, 91143
Sorry, prediction pasa_asmbl_55631.p1 fails validation.
(CCC)	 CG	88913-88963	GT	AGG
(TTC)	 AG	89440-89617	GT	AGG
(CAG)	 AG	91004-91143	TT	GAT
-recovered pasa_asmbl_55631.p1, internal, 89440, 89617
Valid prediction for Augustus_model.g15765.t1
Valid prediction for snap_scaffold_9-snap.3382-T1
Valid prediction for CodingQuarry_transcript_62447-T1
Valid prediction for snap_scaffold_9-snap.3396-T1
Valid prediction for snap_scaffold_9-snap.3385-T1
Valid prediction for HiQ_model.g15752.t1
Valid prediction for snap_scaffold_9-snap.3398-T1
Valid prediction for GlimmerHMM_glimmerT_23661-T1
Valid prediction for snap_scaffold_9-snap.3408-T1
Valid prediction for CodingQuarry_transcript_62440-T1
Valid prediction for Augustus_model.g15760.t1
Valid prediction for Augustus_model.g15759.t1
Valid prediction for snap_scaffold_9-snap.3403-T1
Valid prediction for Augustus_model.g15764.t1
Valid prediction for snap_scaffold_9-snap.3404-T1
Valid prediction for GlimmerHMM_glimmerT_23659-T1
Valid prediction for HiQ_model.g15746.t1
Couldn't classify 150623, 150752
Couldn't classify 153538, 153684
Sorry, prediction pasa_asmbl_55616.p1 fails validation.
(CGA)	 TT	150623-150752	GT	AGG
(CCG)	 AG	152797-153065	GT	AGG
(CAA)	 AG	153538-153684	CA	GGC
-recovered pasa_asmbl_55616.p1, internal, 152797, 153065
Valid prediction for snap_scaffold_9-snap.3409-T1
Valid prediction for GlimmerHMM_glimmerT_23663-T1
Valid prediction for snap_scaffold_9-snap.3369-T1
Valid prediction for pasa_asmbl_55624.p1
Valid prediction for snap_scaffold_9-snap.3376-T1
Valid prediction for CodingQuarry_transcript_62438-T1
Couldn't classify 156041, 156112
Couldn't classify 156950, 157027
Sorry, prediction pasa_asmbl_55751.p1 fails validation.
(GTC)	 AC	156041-156112	GT	AGG
(GTG)	 AG	156386-156508	GT	AGG
(ATT)	 AG	156648-156785	GT	AGG
(GTA)	 AG	156950-157027	GG	CCG
-recovered pasa_asmbl_55751.p1, internal, 156386, 156508
-recovered pasa_asmbl_55751.p1, internal, 156648, 156785
Valid prediction for GlimmerHMM_glimmerT_23656-T1
Valid prediction for pasa_asmbl_55603.p1
Valid prediction for Augustus_model.g15738.t1
Valid prediction for GlimmerHMM_glimmerT_23633-T1
Valid prediction for snap_scaffold_9-snap.3413-T1
Valid prediction for Augustus_model.g15762.t1
Valid prediction for CodingQuarry_transcript_62437-T1
Couldn't classify 126010, 126011
Sorry, prediction CodingQuarry_transcript_62448-T1 fails validation.
(ATG)	 AC	126010-126011	GT	ATG
(GAG)	 AG	126460-126639	GT	AGG
(GCA)	 AG	126813-126987	AC	AAA
-recovered CodingQuarry_transcript_62448-T1, terminal, 126813, 126987
-recovered CodingQuarry_transcript_62448-T1, internal, 126460, 126639
Valid prediction for Augustus_model.g15748.t1
Valid prediction for snap_scaffold_9-snap.3397-T1
Valid prediction for CodingQuarry_transcript_62442-T1
Valid prediction for snap_scaffold_9-snap.3412-T1
Valid prediction for Augustus_model.g15751.t1
Couldn't classify 232276, 232454
Sorry, prediction pasa_asmbl_55596.p1 fails validation.
(GAA)	 AG	232276-232454	GT	GGG
(ATT)	 AG	232607-232730	AA	GAA
-recovered pasa_asmbl_55596.p1, terminal, 232607, 232730
-recovered pasa_asmbl_55596.p1, internal, 232276, 232454
Valid prediction for GlimmerHMM_glimmerT_23645-T1
Valid prediction for snap_scaffold_9-snap.3418-T1
Valid prediction for Augustus_model.g15766.t1
Valid prediction for GlimmerHMM_glimmerT_23666-T1
Valid prediction for snap_scaffold_9-snap.3367-T1
Valid prediction for GlimmerHMM_glimmerT_23649-T1
Valid prediction for Augustus_model.g15729.t1
Valid prediction for CodingQuarry_transcript_62451-T1
Couldn't classify 280871, 280966
Sorry, prediction pasa_asmbl_55592.p1 fails validation.
(AGA)	 AA	280871-280966	GT	TCG
(CTT)	 AG	281758-281923	GT	TGG
(TCA)	 AG	282914-282981	GT	AGG
(GCT)	 AG	283073-283187	GT	AGG
(GTG)	 AG	283516-283589	GG	AAG
-recovered pasa_asmbl_55592.p1, terminal, 283516, 283589
-recovered pasa_asmbl_55592.p1, internal, 281758, 281923
-recovered pasa_asmbl_55592.p1, internal, 282914, 282981
-recovered pasa_asmbl_55592.p1, internal, 283073, 283187
Valid prediction for snap_scaffold_9-snap.3407-T1
Valid prediction for Augustus_model.g15730.t1
Couldn't classify 238108, 238264
Sorry, prediction pasa_asmbl_55595.p1 fails validation.
(CGT)	 GC	238108-238264	GT	TGG
(CAT)	 AG	238422-238547	GT	TGG
(GTC)	 AG	238737-238839	GT	GGG
(ACA)	 AG	239171-239481	GT	AGG
(GAT)	 AG	240353-240357	CA	GAC
-recovered pasa_asmbl_55595.p1, terminal, 240353, 240357
-recovered pasa_asmbl_55595.p1, internal, 238422, 238547
-recovered pasa_asmbl_55595.p1, internal, 238737, 238839
-recovered pasa_asmbl_55595.p1, internal, 239171, 239481
Valid prediction for snap_scaffold_9-snap.3415-T1
Valid prediction for pasa_asmbl_55585.p1
Valid prediction for snap_scaffold_9-snap.3401-T1
Valid prediction for GlimmerHMM_glimmerT_23639-T1
Valid prediction for Augustus_model.g15763.t1
Valid prediction for pasa_asmbl_55608.p1
Valid prediction for CodingQuarry_transcript_62439-T1
Couldn't classify 104360, 104668
Sorry, prediction pasa_asmbl_55626.p1 fails validation.
(TTG)	 CA	104360-104668	GG	GAG
Valid prediction for CodingQuarry_transcript_62449-T1
Valid prediction for GlimmerHMM_glimmerT_23648-T1
Valid prediction for Augustus_model.g15755.t1
Valid prediction for snap_scaffold_9-snap.3416-T1
Valid prediction for pasa_asmbl_55611.p1
Valid prediction for snap_scaffold_9-snap.3374-T1
Valid prediction for CodingQuarry_transcript_62445-T1
Valid prediction for GlimmerHMM_glimmerT_23635-T1
Valid prediction for GlimmerHMM_glimmerT_23632-T1
Valid prediction for GlimmerHMM_glimmerT_23643-T1
Valid prediction for GlimmerHMM_glimmerT_23662-T1
Valid prediction for snap_scaffold_9-snap.3366-T1
Valid prediction for Augustus_model.g15740.t1
Valid prediction for snap_scaffold_9-snap.3411-T1
Valid prediction for HiQ_model.g15745.t1
Valid prediction for GlimmerHMM_glimmerT_23651-T1
Valid prediction for Augustus_model.g15761.t1
Valid prediction for GlimmerHMM_glimmerT_23655-T1
Valid prediction for GlimmerHMM_glimmerT_23664-T1
Valid prediction for CodingQuarry_transcript_62436-T1
Valid prediction for snap_scaffold_9-snap.3406-T1
Valid prediction for Augustus_model.g15758.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 150978, rend_intergenic: 136626  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167615, rend_intergenic: 163224  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190887, rend_intergenic: 188962  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223655, rend_intergenic: 219052  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238196, rend_intergenic: 235000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 255065, rend_intergenic: 251893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 300895
-exon list size: 631


building trellis

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23.1    
23.2    
23.4    
23.5    
23.7    
23.9    
24.0    
24.2    
24.3    
24.5    
24.6    
24.8    
25.0    
25.1    
25.3    
25.4    
25.6    
25.8    
25.9    
26.1    
26.2    
26.4    
26.5    
26.7    
26.9    
27.0    
27.2    
27.3    
27.5    
27.6    
27.8    
28.0    
28.1    
28.3    
28.4    
28.6    
28.8    
28.9    
29.1    
29.2    
29.4    
29.5    
29.7    
29.9    
30.0    
30.2    
30.3    
30.5    
30.6    
30.8    
31.0    
31.1    
31.3    
31.4    
31.6    
31.8    
31.9    
32.1    
32.2    
32.4    
32.5    
32.7    
32.9    
33.0    
33.2    
33.3    
33.5    
33.6    
33.8    
34.0    
34.1    
34.3    
34.4    
34.6    
34.8    
34.9    
35.1    
35.2    
35.4    
35.5    
35.7    
35.9    
36.0    
36.2    
36.3    
36.5    
36.7    
36.8    
37.0    
37.1    
37.3    
37.4    
37.6    
37.8    
37.9    
38.1    
38.2    
38.4    
38.5    
38.7    
38.9    
39.0    
39.2    
39.3    
39.5    
39.7    
39.8    
40.0    
40.1    
40.3    
40.4    
40.6    
40.8    
40.9    
41.1    
41.2    
41.4    
41.5    
41.7    
41.9    
42.0    
42.2    
42.3    
42.5    
42.7    
42.8    
43.0    
43.1    
43.3    
43.4    
43.6    
43.8    
43.9    
44.1    
44.2    
44.4    
44.5    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.7    
45.8    
46.0    
46.1    
46.3    
46.4    
46.6    
46.8    
46.9    
47.1    
47.2    
47.4    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.5    
48.7    
48.8    
49.0    
49.1    
49.3    
49.4    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.6    
50.7    
50.9    
51.0    
51.2    
51.3    
51.5    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.6    
52.8    
52.9    
53.1    
53.2    
53.4    
53.6    
53.7    
53.9    
54.0    
54.2    
54.3    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.5    
55.6    
55.8    
55.9    
56.1    
56.2    
56.4    
56.6    
56.7    
56.9    
57.0    
57.2    
57.3    
57.5    
57.7    
57.8    
58.0    
58.1    
58.3    
58.5    
58.6    
58.8    
58.9    
59.1    
59.2    
59.4    
59.6    
59.7    
59.9    
60.0    
60.2    
60.3    
60.5    
60.7    
60.8    
61.0    
61.1    
61.3    
61.5    
61.6    
61.8    
61.9    
62.1    
62.2    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.7    
63.8    
64.0    
64.1    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.4    
65.6    
65.7    
65.9    
66.0    
66.2    
66.4    
66.5    
66.7    
66.8    
67.0    
67.1    
67.3    
67.5    
67.6    
67.8    
67.9    
68.1    
68.2    
68.4    
68.6    
68.7    
68.9    
69.0    
69.2    
69.4    
69.5    
69.7    
69.8    
70.0    
70.1    
70.3    
70.5    
70.6    
70.8    
70.9    
71.1    
71.2    
71.4    
71.6    
71.7    
71.9    
72.0    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.3    
73.5    
73.6    
73.8    
73.9    
74.1    
74.2    
74.4    
74.6    
74.7    
74.9    
75.0    
75.2    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.5    
76.6    
76.8    
76.9    
77.1    
77.3    
77.4    
77.6    
77.7    
77.9    
78.0    
78.2    
78.4    
78.5    
78.7    
78.8    
79.0    
79.1    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.7    
80.9    
81.0    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.2    
84.4    
84.5    
84.7    
84.8    
85.0    
85.2    
85.3    
85.5    
85.6    
85.8    
85.9    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.0    
87.2    
87.4    
87.5    
87.7    
87.8    
88.0    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.4    
90.5    
90.7    
90.8    
91.0    
91.2    
91.3    
91.5    
91.6    
91.8    
91.9    
92.1    
92.3    
92.4    
92.6    
92.7    
92.9    
93.0    
93.2    
93.4    
93.5    
93.7    
93.8    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.1    
95.3    
95.4    
95.6    
95.7    
95.9    
96.1    
96.2    
96.4    
96.5    
96.7    
96.8    
97.0    
97.2    
97.3    
97.5    
97.6    
97.8    
97.9    
98.1    
98.3    
98.4    
98.6    
98.7    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 43 predictions from path traversal
Error with prediction: snap lend_intergenic: 150978, rend_intergenic: 136626  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167615, rend_intergenic: 163224  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190887, rend_intergenic: 188962  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223655, rend_intergenic: 219052  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238196, rend_intergenic: 235000  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 255065, rend_intergenic: 251893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 40 predictions persist after filtering for low support