-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_9/scaffold_9_11560225-11832382

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_9-snap.2261-T1
Valid prediction for Augustus_model.g15270.t1
Valid prediction for GlimmerHMM_glimmerT_22914-T1
Valid prediction for HiQ_model.g15285.t1
Valid prediction for Augustus_model.g15280.t1
Valid prediction for GlimmerHMM_glimmerT_22925-T1
Valid prediction for Augustus_model.g15292.t1
Valid prediction for snap_scaffold_9-snap.2273-T1
Valid prediction for snap_scaffold_9-snap.2291-T1
Valid prediction for CodingQuarry_transcript_62336-T1
Valid prediction for snap_scaffold_9-snap.2262-T1
Valid prediction for Augustus_model.g15284.t1
Valid prediction for Augustus_model.g15287.t1
Valid prediction for Augustus_model.g15272.t1
Valid prediction for snap_scaffold_9-snap.2305-T1
Valid prediction for snap_scaffold_9-snap.2276-T1
Valid prediction for snap_scaffold_9-snap.2315-T1
Valid prediction for snap_scaffold_9-snap.2312-T1
Valid prediction for snap_scaffold_9-snap.2268-T1
Valid prediction for Augustus_model.g15269.t1
Valid prediction for GlimmerHMM_glimmerT_22930-T1
Valid prediction for GlimmerHMM_glimmerT_22943-T1
Valid prediction for pasa_asmbl_54369.p1
Valid prediction for GlimmerHMM_glimmerT_22922-T1
Valid prediction for Augustus_model.g15277.t1
Valid prediction for Augustus_model.g15264.t1
Couldn't classify 175747, 175789
Sorry, prediction pasa_asmbl_54371.p1 fails validation.
(AAT)	 TG	175747-175789	GT	AGG
(GAG)	 AG	175963-176091	GT	AGG
(AGT)	 AG	176306-176417	GT	AGG
(GGA)	 AG	176875-177025	GT	TGG
(ACC)	 AG	177142-177273	GT	AGG
(GAT)	 AG	177415-177480	GT	CAG
(ACA)	 AG	177588-177656	GT	AGG
(CTG)	 AG	177741-177863	GT	AGG
(CTG)	 AG	178121-178249	GT	AGG
(GTC)	 AG	179437-179651	GT	AGG
(GCT)	 AG	180118-180205	GT	AGG
(CTG)	 AG	180795-180897	GT	GTG
(ATG)	 AG	181066-181145	CC	GAC
-recovered pasa_asmbl_54371.p1, terminal, 181066, 181145
-recovered pasa_asmbl_54371.p1, internal, 175963, 176091
-recovered pasa_asmbl_54371.p1, internal, 176306, 176417
-recovered pasa_asmbl_54371.p1, internal, 176875, 177025
-recovered pasa_asmbl_54371.p1, internal, 177142, 177273
-recovered pasa_asmbl_54371.p1, internal, 177415, 177480
-recovered pasa_asmbl_54371.p1, internal, 177588, 177656
-recovered pasa_asmbl_54371.p1, internal, 177741, 177863
-recovered pasa_asmbl_54371.p1, internal, 178121, 178249
-recovered pasa_asmbl_54371.p1, internal, 179437, 179651
-recovered pasa_asmbl_54371.p1, internal, 180118, 180205
-recovered pasa_asmbl_54371.p1, internal, 180795, 180897
Valid prediction for snap_scaffold_9-snap.2267-T1
Valid prediction for CodingQuarry_transcript_62327-T1
Valid prediction for pasa_asmbl_54382.p1
Valid prediction for HiQ_model.g15291.t1
Couldn't classify 75, 149
Sorry, prediction pasa_asmbl_54360.p1 fails validation.
(CTG)	 TG	75-149	GT	AGG
(GTT)	 AG	353-499	GT	AGG
(CTG)	 AG	1110-1292	GT	AGG
(TTG)	 AG	2625-2789	GT	AGG
(GAG)	 AG	3452-3529	GT	AGG
(AAT)	 AG	4091-4200	GT	AAG
(GAA)	 AG	4660-4780	GT	AGG
(GAT)	 AG	5258-5491	TC	AAT
-recovered pasa_asmbl_54360.p1, terminal, 5258, 5491
-recovered pasa_asmbl_54360.p1, internal, 353, 499
-recovered pasa_asmbl_54360.p1, internal, 1110, 1292
-recovered pasa_asmbl_54360.p1, internal, 2625, 2789
-recovered pasa_asmbl_54360.p1, internal, 3452, 3529
-recovered pasa_asmbl_54360.p1, internal, 4091, 4200
-recovered pasa_asmbl_54360.p1, internal, 4660, 4780
Valid prediction for snap_scaffold_9-snap.2295-T1
Valid prediction for Augustus_model.g15263.t1
Valid prediction for pasa_asmbl_54363.p1
Valid prediction for CodingQuarry_transcript_62325-T1
Valid prediction for pasa_asmbl_54366.p1
Valid prediction for CodingQuarry_transcript_62328-T1
Valid prediction for snap_scaffold_9-snap.2293-T1
Valid prediction for Augustus_model.g15281.t1
Valid prediction for snap_scaffold_9-snap.2296-T1
Valid prediction for HiQ_model.g15267.t1
Valid prediction for GlimmerHMM_glimmerT_22928-T1
Valid prediction for snap_scaffold_9-snap.2269-T1
Valid prediction for snap_scaffold_9-snap.2292-T1
Valid prediction for Augustus_model.g15273.t1
Valid prediction for snap_scaffold_9-snap.2274-T1
Valid prediction for snap_scaffold_9-snap.2306-T1
Valid prediction for HiQ_model.g15283.t1
Valid prediction for Augustus_model.g15268.t1
Valid prediction for snap_scaffold_9-snap.2264-T1
Couldn't classify 168952, 169059
Sorry, prediction pasa_asmbl_54368.p1 fails validation.
(ATG)	 TC	168326-168503	GT	AGG
(GGT)	 AG	168727-168872	GT	AGG
(GAC)	 AG	168952-169059	AG	GGA
-recovered pasa_asmbl_54368.p1, initial, 168326, 168503
-recovered pasa_asmbl_54368.p1, internal, 168727, 168872
Valid prediction for GlimmerHMM_glimmerT_22918-T1
Valid prediction for snap_scaffold_9-snap.2271-T1
Valid prediction for Augustus_model.g15265.t1
Valid prediction for GlimmerHMM_glimmerT_22927-T1
Valid prediction for snap_scaffold_9-snap.2297-T1
Couldn't classify 224591, 224657
Sorry, prediction pasa_asmbl_54779.p1 fails validation.
(GCT)	 TA	224591-224657	GT	TGG
(CCG)	 AG	225053-225219	GT	AGG
(GTG)	 AG	225388-225511	GT	AGG
(CGT)	 AG	225616-225695	GT	GAG
-recovered pasa_asmbl_54779.p1, terminal, 225616, 225695
-recovered pasa_asmbl_54779.p1, internal, 225053, 225219
-recovered pasa_asmbl_54779.p1, internal, 225388, 225511
-recovered pasa_asmbl_54779.p1, internal, 225616, 225695
Valid prediction for GlimmerHMM_glimmerT_22923-T1
Valid prediction for GlimmerHMM_glimmerT_22937-T1
Valid prediction for snap_scaffold_9-snap.2283-T1
Valid prediction for GlimmerHMM_glimmerT_22933-T1
Valid prediction for snap_scaffold_9-snap.2277-T1
Valid prediction for GlimmerHMM_glimmerT_22920-T1
Valid prediction for snap_scaffold_9-snap.2263-T1
Valid prediction for GlimmerHMM_glimmerT_22932-T1
Valid prediction for GlimmerHMM_glimmerT_22938-T1
Valid prediction for GlimmerHMM_glimmerT_22917-T1
Valid prediction for Augustus_model.g15290.t1
Valid prediction for snap_scaffold_9-snap.2307-T1
Valid prediction for snap_scaffold_9-snap.2280-T1
Valid prediction for snap_scaffold_9-snap.2265-T1
Valid prediction for Augustus_model.g15289.t1
Valid prediction for HiQ_model.g15282.t1
Valid prediction for HiQ_model.g15276.t1
Valid prediction for GlimmerHMM_glimmerT_22919-T1
Valid prediction for Augustus_model.g15271.t1
Valid prediction for pasa_asmbl_54374.p1
Valid prediction for snap_scaffold_9-snap.2284-T1
Valid prediction for CodingQuarry_transcript_62329-T1
Valid prediction for snap_scaffold_9-snap.2301-T1
Valid prediction for snap_scaffold_9-snap.2259-T1
Valid prediction for HiQ_model.g15297.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_9-snap.2257-T1
Valid prediction for snap_scaffold_9-snap.2298-T1
Valid prediction for CodingQuarry_transcript_62341-T1
Valid prediction for GlimmerHMM_glimmerT_22939-T1
Valid prediction for snap_scaffold_9-snap.2299-T1
Valid prediction for Augustus_model.g15274.t1
Valid prediction for HiQ_model.g15266.t1
Valid prediction for GlimmerHMM_glimmerT_22944-T1
Valid prediction for HiQ_model.g15293.t1
Valid prediction for snap_scaffold_9-snap.2290-T1
Valid prediction for Augustus_model.g15295.t1
Valid prediction for GlimmerHMM_glimmerT_22929-T1
Valid prediction for GlimmerHMM_glimmerT_22935-T1
Valid prediction for pasa_asmbl_55316.p1
Valid prediction for snap_scaffold_9-snap.2303-T1
Valid prediction for GlimmerHMM_glimmerT_22940-T1
Valid prediction for CodingQuarry_transcript_62334-T1
Valid prediction for snap_scaffold_9-snap.2285-T1
Valid prediction for GlimmerHMM_glimmerT_22941-T1
Couldn't classify 6935, 7488
Couldn't classify 7510, 7566
Couldn't classify 7588, 7639
Sorry, prediction CodingQuarry_transcript_62340-T1 fails validation.
(ATG)	 AC	6935-7488	AG	CCA
(TGT)	 CC	7510-7566	TG	ACT
(CAC)	 AC	7588-7639	GT	ACG
(AGT)	 AG	8850-8958	GT	AGG
(AGC)	 AG	9117-9383	GT	AGG
(TTG)	 AG	9584-9646	GT	AGG
(ACA)	 AG	9805-9862	GC	AGG
(GGT)	 AG	10048-10188	GT	AGG
(GCC)	 AG	10285-10405	GT	AGG
(AAT)	 AG	10600-10751	GT	GAG
(GGA)	 AG	11266-11392	TG	GAT
-recovered CodingQuarry_transcript_62340-T1, terminal, 11266, 11392
-recovered CodingQuarry_transcript_62340-T1, internal, 8850, 8958
-recovered CodingQuarry_transcript_62340-T1, internal, 9117, 9383
-recovered CodingQuarry_transcript_62340-T1, internal, 9584, 9646
-recovered CodingQuarry_transcript_62340-T1, internal, 9805, 9862
-recovered CodingQuarry_transcript_62340-T1, internal, 10048, 10188
-recovered CodingQuarry_transcript_62340-T1, internal, 10285, 10405
-recovered CodingQuarry_transcript_62340-T1, internal, 10600, 10751
Valid prediction for GlimmerHMM_glimmerT_22915-T1
Valid prediction for snap_scaffold_9-snap.2289-T1
Valid prediction for snap_scaffold_9-snap.2309-T1
Valid prediction for GlimmerHMM_glimmerT_22931-T1
Valid prediction for Augustus_model.g15300.t1
Couldn't classify 27420, 28124
Sorry, prediction pasa_asmbl_55311.p1 fails validation.
(GCC)	 CA	27420-28124	TT	GAT
Valid prediction for snap_scaffold_9-snap.2272-T1
Valid prediction for snap_scaffold_9-snap.2313-T1
Valid prediction for snap_scaffold_9-snap.2270-T1
Valid prediction for snap_scaffold_9-snap.2260-T1
Valid prediction for GlimmerHMM_glimmerT_22926-T1
Valid prediction for snap_scaffold_9-snap.2278-T1
Valid prediction for GlimmerHMM_glimmerT_22936-T1
Valid prediction for CodingQuarry_transcript_62335-T1
Valid prediction for CodingQuarry_transcript_62331-T1
Valid prediction for snap_scaffold_9-snap.2279-T1
Valid prediction for snap_scaffold_9-snap.2287-T1
Couldn't classify 564, 639
Sorry, prediction pasa_asmbl_55320.p1 fails validation.
(AAT)	 TG	564-639	GT	AGG
(CGA)	 AG	1014-1199	GT	AGG
(GTT)	 AG	1471-1734	GT	AGG
(CTG)	 AG	1931-2260	GT	GGG
(AGC)	 AG	2560-2889	GT	TGG
(AGC)	 AG	3270-3359	GT	ATG
(CTA)	 AG	3448-3467	GT	AGG
(AAC)	 AG	3561-3572	GG	AAG
-recovered pasa_asmbl_55320.p1, terminal, 3561, 3572
-recovered pasa_asmbl_55320.p1, internal, 1014, 1199
-recovered pasa_asmbl_55320.p1, internal, 1471, 1734
-recovered pasa_asmbl_55320.p1, internal, 1931, 2260
-recovered pasa_asmbl_55320.p1, internal, 2560, 2889
-recovered pasa_asmbl_55320.p1, internal, 3270, 3359
-recovered pasa_asmbl_55320.p1, internal, 3448, 3467
Couldn't classify 233670, 233881
Sorry, prediction pasa_asmbl_55299.p1 fails validation.
(CTC)	 AA	233670-233881	GT	GCG
(AGA)	 AG	234239-234368	GT	AAG
(ATT)	 AG	234501-234701	GT	AGG
(GCT)	 AG	234896-235060	GT	TGG
(GTG)	 AG	235275-235403	CC	AGC
-recovered pasa_asmbl_55299.p1, terminal, 235275, 235403
-recovered pasa_asmbl_55299.p1, internal, 234239, 234368
-recovered pasa_asmbl_55299.p1, internal, 234501, 234701
-recovered pasa_asmbl_55299.p1, internal, 234896, 235060
Valid prediction for Augustus_model.g15279.t1
Valid prediction for snap_scaffold_9-snap.2294-T1
Valid prediction for CodingQuarry_transcript_62332-T1
Valid prediction for GlimmerHMM_glimmerT_22942-T1
Valid prediction for snap_scaffold_9-snap.2286-T1
Valid prediction for GlimmerHMM_glimmerT_22934-T1
Valid prediction for GlimmerHMM_glimmerT_22921-T1
Valid prediction for snap_scaffold_9-snap.2256-T1
Valid prediction for pasa_asmbl_55310.p1
Valid prediction for HiQ_model.g15294.t1
Valid prediction for HiQ_model.g15299.t1
Valid prediction for snap_scaffold_9-snap.2300-T1
Valid prediction for CodingQuarry_transcript_62337-T1
Valid prediction for snap_scaffold_9-snap.2316-T1
Valid prediction for Augustus_model.g15262.t1
Valid prediction for Augustus_model.g15288.t1
Valid prediction for snap_scaffold_9-snap.2302-T1
Valid prediction for snap_scaffold_9-snap.2275-T1
Valid prediction for snap_scaffold_9-snap.2258-T1
Valid prediction for Augustus_model.g15286.t1
Valid prediction for snap_scaffold_9-snap.2308-T1
Valid prediction for Augustus_model.g15278.t1
Valid prediction for snap_scaffold_9-snap.2288-T1
Valid prediction for GlimmerHMM_glimmerT_22946-T1
Valid prediction for HiQ_model.g15298.t1
Valid prediction for snap_scaffold_9-snap.2314-T1
Valid prediction for CodingQuarry_transcript_62338-T1
Valid prediction for snap_scaffold_9-snap.2304-T1
Valid prediction for CodingQuarry_transcript_62333-T1
Valid prediction for GlimmerHMM_glimmerT_22945-T1
Valid prediction for snap_scaffold_9-snap.2311-T1
Valid prediction for snap_scaffold_9-snap.2310-T1
Couldn't classify 6935, 7488
Couldn't classify 7510, 7566
Couldn't classify 7588, 7639
Sorry, prediction CodingQuarry_transcript_62339-T1 fails validation.
(ATG)	 AC	6935-7488	AG	CCA
(TGT)	 CC	7510-7566	TG	ACT
(CAC)	 AC	7588-7639	GT	ACG
(AGT)	 AG	8850-8958	GT	AGG
(AGC)	 AG	9117-9383	GT	AGG
(TTG)	 AG	9584-9646	GT	AGG
(ACA)	 AG	9805-9862	GC	AGG
(GGT)	 AG	10048-10188	GT	AGG
(TAG)	 AG	10282-10405	GT	AGG
(AAT)	 AG	10600-10751	GT	GAG
(GGA)	 AG	11266-11392	TG	GAT
-recovered CodingQuarry_transcript_62339-T1, terminal, 11266, 11392
-recovered CodingQuarry_transcript_62339-T1, internal, 8850, 8958
-recovered CodingQuarry_transcript_62339-T1, internal, 9117, 9383
-recovered CodingQuarry_transcript_62339-T1, internal, 9584, 9646
-recovered CodingQuarry_transcript_62339-T1, internal, 9805, 9862
-recovered CodingQuarry_transcript_62339-T1, internal, 10048, 10188
-recovered CodingQuarry_transcript_62339-T1, internal, 10282, 10405
-recovered CodingQuarry_transcript_62339-T1, internal, 10600, 10751
Valid prediction for GlimmerHMM_glimmerT_22924-T1
Valid prediction for snap_scaffold_9-snap.2282-T1
Valid prediction for CodingQuarry_transcript_62342-T1
Valid prediction for snap_scaffold_9-snap.2266-T1
Valid prediction for HiQ_model.g15301.t1
Valid prediction for Augustus_model.g15261.t1
Valid prediction for HiQ_model.g15296.t1
Valid prediction for snap_scaffold_9-snap.2281-T1
Valid prediction for pasa_asmbl_55306.p1
Valid prediction for GlimmerHMM_glimmerT_22916-T1
Couldn't classify 18624, 18823
Sorry, prediction pasa_asmbl_55312.p1 fails validation.
(GTA)	 GC	18624-18823	GT	CGG
(GAA)	 AG	19943-20024	GT	AGG
(CTG)	 AG	20275-20372	GT	AGG
(TAA)	 AG	20479-20578	GT	TAG
(TCT)	 AG	20990-21065	GT	AGG
(GTC)	 AG	21181-21288	GT	AAG
(CAC)	 AG	21685-21821	GT	GGG
(GAG)	 AG	21963-21989	GT	GGG
(TGG)	 AG	22111-22236	GT	GTG
(GAG)	 AG	22352-22431	GT	TGG
(GGG)	 AG	22543-22657	AT	AAA
-recovered pasa_asmbl_55312.p1, terminal, 22543, 22657
-recovered pasa_asmbl_55312.p1, internal, 19943, 20024
-recovered pasa_asmbl_55312.p1, internal, 20275, 20372
-recovered pasa_asmbl_55312.p1, internal, 20479, 20578
-recovered pasa_asmbl_55312.p1, internal, 20990, 21065
-recovered pasa_asmbl_55312.p1, internal, 21181, 21288
-recovered pasa_asmbl_55312.p1, internal, 21685, 21821
-recovered pasa_asmbl_55312.p1, internal, 21963, 21989
-recovered pasa_asmbl_55312.p1, internal, 22111, 22236
-recovered pasa_asmbl_55312.p1, internal, 22352, 22431
Valid prediction for Augustus_model.g15275.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 178046, rend_intergenic: 178043  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71455, rend_intergenic: 68488  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93277, rend_intergenic: 89359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110896, rend_intergenic: 108863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119339, rend_intergenic: 117206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181584, rend_intergenic: 178688  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 265224, rend_intergenic: 263234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 270653, rend_intergenic: 265295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 272158
-exon list size: 512


building trellis

0.2    
0.4    
0.6    
0.8    
1.0    
1.2    
1.4    
1.6    
1.8    
1.9    
2.1    
2.3    
2.5    
2.7    
2.9    
3.1    
3.3    
3.5    
3.7    
3.9    
4.1    
4.3    
4.5    
4.7    
4.9    
5.1    
5.3    
5.4    
5.6    
5.8    
6.0    
6.2    
6.4    
6.6    
6.8    
7.0    
7.2    
7.4    
7.6    
7.8    
8.0    
8.2    
8.4    
8.6    
8.8    
8.9    
9.1    
9.3    
9.5    
9.7    
9.9    
10.1    
10.3    
10.5    
10.7    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.1    
12.3    
12.5    
12.6    
12.8    
13.0    
13.2    
13.4    
13.6    
13.8    
14.0    
14.2    
14.4    
14.6    
14.8    
15.0    
15.2    
15.4    
15.6    
15.8    
16.0    
16.1    
16.3    
16.5    
16.7    
16.9    
17.1    
17.3    
17.5    
17.7    
17.9    
18.1    
18.3    
18.5    
18.7    
18.9    
19.1    
19.3    
19.5    
19.6    
19.8    
20.0    
20.2    
20.4    
20.6    
20.8    
21.0    
21.2    
21.4    
21.6    
21.8    
22.0    
22.2    
22.4    
22.6    
22.8    
23.0    
23.2    
23.3    
23.5    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.1    
25.3    
25.5    
25.7    
25.9    
26.1    
26.3    
26.5    
26.7    
26.8    
27.0    
27.2    
27.4    
27.6    
27.8    
28.0    
28.2    
28.4    
28.6    
28.8    
29.0    
29.2    
29.4    
29.6    
29.8    
30.0    
30.2    
30.4    
30.5    
30.7    
30.9    
31.1    
31.3    
31.5    
31.7    
31.9    
32.1    
32.3    
32.5    
32.7    
32.9    
33.1    
33.3    
33.5    
33.7    
33.9    
34.0    
34.2    
34.4    
34.6    
34.8    
35.0    
35.2    
35.4    
35.6    
35.8    
36.0    
36.2    
36.4    
36.6    
36.8    
37.0    
37.2    
37.4    
37.5    
37.7    
37.9    
38.1    
38.3    
38.5    
38.7    
38.9    
39.1    
39.3    
39.5    
39.7    
39.9    
40.1    
40.3    
40.5    
40.7    
40.9    
41.1    
41.2    
41.4    
41.6    
41.8    
42.0    
42.2    
42.4    
42.6    
42.8    
43.0    
43.2    
43.4    
43.6    
43.8    
44.0    
44.2    
44.4    
44.6    
44.7    
44.9    
45.1    
45.3    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.3    
47.5    
47.7    
47.9    
48.1    
48.2    
48.4    
48.6    
48.8    
49.0    
49.2    
49.4    
49.6    
49.8    
50.0    
50.2    
50.4    
50.6    
50.8    
51.0    
51.2    
51.4    
51.6    
51.8    
51.9    
52.1    
52.3    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.1    
55.3    
55.4    
55.6    
55.8    
56.0    
56.2    
56.4    
56.6    
56.8    
57.0    
57.2    
57.4    
57.6    
57.8    
58.0    
58.2    
58.4    
58.6    
58.8    
58.9    
59.1    
59.3    
59.5    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.6    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
64.0    
64.2    
64.4    
64.6    
64.8    
65.0    
65.2    
65.4    
65.6    
65.8    
66.0    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.1    
69.3    
69.5    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.8    
72.0    
72.2    
72.4    
72.6    
72.8    
73.0    
73.2    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.5    
80.7    
80.9    
81.1    
81.3    
81.5    
81.7    
81.9    
82.1    
82.3    
82.5    
82.7    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.1    
96.3    
96.5    
96.7    
96.9    
97.1    
97.3    
97.5    
97.7    
97.9    
98.1    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 49 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 178046, rend_intergenic: 178043  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71455, rend_intergenic: 68488  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93277, rend_intergenic: 89359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110896, rend_intergenic: 108863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119339, rend_intergenic: 117206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181584, rend_intergenic: 178688  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 265224, rend_intergenic: 263234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 270653, rend_intergenic: 265295  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 46 predictions persist after filtering for low support