-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_870

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2635, 2732
Sorry, prediction snap_scaffold_870-snap.1-T1 fails validation.
(ATA)	 AG	2635-2732	GT	AGG
(AAC)	 AG	3535-3621	TT	GAT
-recovered snap_scaffold_870-snap.1-T1, terminal, 3535, 3621
-recovered snap_scaffold_870-snap.1-T1, internal, 2635, 2732

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 834, 965
Sorry, prediction snap_scaffold_870-snap.2-T1 fails validation.
(ATG)	 AG	651-823	GT	TCG
(GGG)	 AG	834-965	GT	TGG
-recovered snap_scaffold_870-snap.2-T1, initial, 651, 823
-recovered snap_scaffold_870-snap.2-T1, internal, 651, 823
-recovered snap_scaffold_870-snap.2-T1, internal, 834, 965
Sorry, intron length (9) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3621, rend_intergenic: 3175  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 4139
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 3621, rend_intergenic: 3175  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support