-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_845

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 604, 741
Sorry, prediction snap_scaffold_845-snap.1-T1 fails validation.
(GAG)	 AG	604-741	GT	AAG
(CGA)	 AG	3863-3970	GT	ATG
(TCC)	 AG	4017-4154	AT	AGA
-recovered snap_scaffold_845-snap.1-T1, terminal, 4017, 4154
-recovered snap_scaffold_845-snap.1-T1, internal, 604, 741
-recovered snap_scaffold_845-snap.1-T1, internal, 3863, 3970

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60786-T1
Couldn't classify 314, 398
Couldn't classify 1267, 1706
Sorry, prediction snap_scaffold_845-snap.2-T1 fails validation.
(ACT)	 AG	314-398	GT	AGG
(GTT)	 AG	1267-1706	GT	AAG
-recovered snap_scaffold_845-snap.2-T1, terminal, 314, 398
-recovered snap_scaffold_845-snap.2-T1, internal, 314, 398
-recovered snap_scaffold_845-snap.2-T1, internal, 1267, 1706

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4154, rend_intergenic: 2538  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 4243
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 4154, rend_intergenic: 2538  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support