-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_824

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 3883, 3966
Sorry, prediction snap_scaffold_824-snap.1-T1 fails validation.
(ATG)	 AA	2371-2531	GT	AGG
(GGC)	 AG	2695-2941	GT	TNG
(AAG)	 AG	3883-3966	GT	CGG
-recovered snap_scaffold_824-snap.1-T1, initial, 2371, 2531
-recovered snap_scaffold_824-snap.1-T1, internal, 2695, 2941
-recovered snap_scaffold_824-snap.1-T1, internal, 3883, 3966
Couldn't classify 680, 873
Sorry, prediction snap_scaffold_824-snap.2-T1 fails validation.
(AGT)	 AG	680-873	GT	CTG
(ACG)	 AG	1967-2057	CG	GAC
-recovered snap_scaffold_824-snap.2-T1, terminal, 1967, 2057
-recovered snap_scaffold_824-snap.2-T1, internal, 680, 873

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4325
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support