-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_820

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 124, 205
Couldn't classify 747, 1034
Sorry, prediction snap_scaffold_820-snap.1-T1 fails validation.
(GAC)	 AG	124-205	GT	AGG
(CTG)	 AG	747-1034	GT	GAG
-recovered snap_scaffold_820-snap.1-T1, internal, 124, 205
-recovered snap_scaffold_820-snap.1-T1, internal, 747, 1034
Valid prediction for Augustus_model.g40221.t1
add_exon() Sorry, Augustus_model.g40221.t1 48-159-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4331
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support