-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_8/scaffold_8_9748517-9958817

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 119730, 119850
Sorry, prediction CodingQuarry_transcript_59761-T1 fails validation.
(ATG)	 GG	116679-116738	GT	AGG
(GGT)	 AG	116929-117031	GT	TGG
(GCG)	 AG	117240-117325	GT	AGG
(GTT)	 AG	117437-117650	GT	TAG
(CAG)	 AG	117748-117843	GT	AGG
(TGT)	 AG	118641-118953	GC	GTG
(ACC)	 CA	119730-119850	GT	AGG
(GAA)	 AG	120359-120478	GT	AGG
(GCC)	 AG	120767-122133	GT	AGG
(CAG)	 AG	122233-122425	GA	GAG
-recovered CodingQuarry_transcript_59761-T1, initial, 116679, 116738
-recovered CodingQuarry_transcript_59761-T1, terminal, 122233, 122425
-recovered CodingQuarry_transcript_59761-T1, internal, 116929, 117031
-recovered CodingQuarry_transcript_59761-T1, internal, 117240, 117325
-recovered CodingQuarry_transcript_59761-T1, internal, 117437, 117650
-recovered CodingQuarry_transcript_59761-T1, internal, 117748, 117843
-recovered CodingQuarry_transcript_59761-T1, internal, 118641, 118953
-recovered CodingQuarry_transcript_59761-T1, internal, 120359, 120478
-recovered CodingQuarry_transcript_59761-T1, internal, 120767, 122133
Couldn't classify 119730, 119850
Sorry, prediction CodingQuarry_transcript_59760-T1 fails validation.
(ATG)	 GG	116679-116738	GT	AGG
(GGT)	 AG	116929-117031	GT	TGG
(GCG)	 AG	117240-117325	GT	AGG
(GTT)	 AG	117437-117650	GT	TAG
(TGT)	 AG	118641-118953	GC	GTG
(ACC)	 CA	119730-119850	GT	AGG
(GCC)	 AG	120767-122133	GT	AGG
(CAG)	 AG	122233-122425	GA	GAG
-recovered CodingQuarry_transcript_59760-T1, initial, 116679, 116738
-recovered CodingQuarry_transcript_59760-T1, terminal, 122233, 122425
-recovered CodingQuarry_transcript_59760-T1, internal, 116929, 117031
-recovered CodingQuarry_transcript_59760-T1, internal, 117240, 117325
-recovered CodingQuarry_transcript_59760-T1, internal, 117437, 117650
-recovered CodingQuarry_transcript_59760-T1, internal, 118641, 118953
-recovered CodingQuarry_transcript_59760-T1, internal, 120767, 122133
Valid prediction for HiQ_model.g13547.t1
Valid prediction for pasa_asmbl_53131.p1
Valid prediction for Augustus_model.g13543.t1
Valid prediction for snap_scaffold_8-snap.1932-T1
Valid prediction for snap_scaffold_8-snap.1912-T1
Valid prediction for snap_scaffold_8-snap.1920-T1
Valid prediction for GlimmerHMM_glimmerT_20362-T1
Valid prediction for snap_scaffold_8-snap.1931-T1
Valid prediction for Augustus_model.g13550.t1
Valid prediction for Augustus_model.g13548.t1
Valid prediction for snap_scaffold_8-snap.1925-T1
Valid prediction for snap_scaffold_8-snap.1913-T1
Valid prediction for snap_scaffold_8-snap.1916-T1
Valid prediction for HiQ_model.g13542.t1
Valid prediction for Augustus_model.g13557.t1
Valid prediction for snap_scaffold_8-snap.1933-T1
Valid prediction for pasa_asmbl_53133.p1
Valid prediction for GlimmerHMM_glimmerT_20380-T1
Valid prediction for Augustus_model.g13545.t1
Valid prediction for Augustus_model.g13546.t1
Valid prediction for CodingQuarry_transcript_59770-T1
Valid prediction for GlimmerHMM_glimmerT_20355-T1
Valid prediction for GlimmerHMM_glimmerT_20353-T1
Valid prediction for HiQ_model.g13552.t1
Valid prediction for Augustus_model.g13540.t1
Valid prediction for Augustus_model.g13536.t1
Valid prediction for pasa_asmbl_53124.p1
Couldn't classify 62512, 63912
Sorry, prediction pasa_asmbl_53107.p1 fails validation.
(ATG)	 GG	62512-63912	GA	GGG
Valid prediction for GlimmerHMM_glimmerT_20358-T1
Couldn't classify 119730, 119850
Sorry, prediction CodingQuarry_transcript_59758-T1 fails validation.
(ATG)	 GG	116679-116738	GT	AGG
(GGT)	 AG	116929-117031	GT	TGG
(GCG)	 AG	117240-117325	GT	AGG
(GTT)	 AG	117437-117650	GT	TAG
(GCC)	 AG	117751-117843	GT	AGG
(TGT)	 AG	118641-118953	GC	GTG
(ACC)	 CA	119730-119850	GT	AGG
(GCC)	 AG	120767-122133	GT	AGG
(CAG)	 AG	122233-122425	GA	GAG
-recovered CodingQuarry_transcript_59758-T1, initial, 116679, 116738
-recovered CodingQuarry_transcript_59758-T1, terminal, 122233, 122425
-recovered CodingQuarry_transcript_59758-T1, internal, 116929, 117031
-recovered CodingQuarry_transcript_59758-T1, internal, 117240, 117325
-recovered CodingQuarry_transcript_59758-T1, internal, 117437, 117650
-recovered CodingQuarry_transcript_59758-T1, internal, 117751, 117843
-recovered CodingQuarry_transcript_59758-T1, internal, 118641, 118953
-recovered CodingQuarry_transcript_59758-T1, internal, 120767, 122133
Valid prediction for pasa_asmbl_53106.p1
Valid prediction for snap_scaffold_8-snap.1919-T1
Valid prediction for GlimmerHMM_glimmerT_20372-T1
Valid prediction for snap_scaffold_8-snap.1945-T1
Valid prediction for Augustus_model.g13544.t1
Couldn't classify 67343, 67404
Couldn't classify 70741, 70815
Sorry, prediction pasa_asmbl_53112.p1 fails validation.
(ACA)	 AG	67343-67404	GT	AGG
(CCA)	 AG	67583-67685	GT	ATG
(CCT)	 AG	68121-68284	GT	CAG
(AGA)	 AG	68456-68576	GT	AGG
(AGC)	 AG	70741-70815	CC	CCC
-recovered pasa_asmbl_53112.p1, internal, 67343, 67404
-recovered pasa_asmbl_53112.p1, internal, 67583, 67685
-recovered pasa_asmbl_53112.p1, internal, 68121, 68284
-recovered pasa_asmbl_53112.p1, internal, 68456, 68576
Valid prediction for snap_scaffold_8-snap.1923-T1
Valid prediction for GlimmerHMM_glimmerT_20367-T1
Valid prediction for snap_scaffold_8-snap.1926-T1
Valid prediction for GlimmerHMM_glimmerT_20366-T1
Valid prediction for Augustus_model.g13562.t1
Valid prediction for CodingQuarry_transcript_59763-T1
Valid prediction for GlimmerHMM_glimmerT_20368-T1
Valid prediction for snap_scaffold_8-snap.1947-T1
Couldn't classify 109944, 110744
Sorry, prediction pasa_asmbl_53115.p1 fails validation.
(CCG)	 CT	109944-110744	TG	AGT
Valid prediction for GlimmerHMM_glimmerT_20359-T1
Valid prediction for GlimmerHMM_glimmerT_20361-T1
Valid prediction for snap_scaffold_8-snap.1951-T1
Valid prediction for HiQ_model.g13541.t1
Valid prediction for HiQ_model.g13551.t1
Valid prediction for snap_scaffold_8-snap.1905-T1
Valid prediction for snap_scaffold_8-snap.1911-T1
Valid prediction for snap_scaffold_8-snap.1929-T1
Valid prediction for GlimmerHMM_glimmerT_20357-T1
Valid prediction for CodingQuarry_transcript_59755-T1
Valid prediction for CodingQuarry_transcript_59769-T1
Valid prediction for snap_scaffold_8-snap.1948-T1
Valid prediction for snap_scaffold_8-snap.1914-T1
Valid prediction for CodingQuarry_transcript_59759-T1
Couldn't classify 70888, 70983
Sorry, prediction pasa_asmbl_53109.p1 fails validation.
(CCC)	 CC	70888-70983	GT	CGG
(GCT)	 AG	71397-71483	GT	TGG
(ATG)	 AG	71584-71703	GT	AGG
(ATC)	 AG	71815-72063	GT	GGG
(GAA)	 AG	72160-72237	GT	CGG
(CCT)	 AG	72357-72411	GT	CAG
(ACA)	 AG	72527-72585	GT	CAG
(GCT)	 AG	72718-72783	GT	CGG
(GCT)	 AG	73053-73282	GT	ACG
(GGA)	 AG	73438-73559	GT	CGG
(CCT)	 AG	74043-74113	GT	TGG
(GAC)	 AG	74235-74330	GT	AGG
(ACT)	 AG	74505-74578	GT	CAG
(TCT)	 AG	74711-74771	GT	AGG
(GGA)	 AG	74853-74912	GT	AGG
(TTG)	 AG	75106-75213	GT	AGG
(ACG)	 AG	75301-75397	GT	TGG
(GGT)	 AG	75557-75629	GT	TGG
(CTT)	 AG	75730-75832	TA	GAT
-recovered pasa_asmbl_53109.p1, initial, 71584, 71703
-recovered pasa_asmbl_53109.p1, terminal, 75730, 75832
-recovered pasa_asmbl_53109.p1, internal, 71397, 71483
-recovered pasa_asmbl_53109.p1, internal, 71584, 71703
-recovered pasa_asmbl_53109.p1, internal, 71815, 72063
-recovered pasa_asmbl_53109.p1, internal, 72160, 72237
-recovered pasa_asmbl_53109.p1, internal, 72357, 72411
-recovered pasa_asmbl_53109.p1, internal, 72527, 72585
-recovered pasa_asmbl_53109.p1, internal, 72718, 72783
-recovered pasa_asmbl_53109.p1, internal, 73053, 73282
-recovered pasa_asmbl_53109.p1, internal, 73438, 73559
-recovered pasa_asmbl_53109.p1, internal, 74043, 74113
-recovered pasa_asmbl_53109.p1, internal, 74235, 74330
-recovered pasa_asmbl_53109.p1, internal, 74505, 74578
-recovered pasa_asmbl_53109.p1, internal, 74711, 74771
-recovered pasa_asmbl_53109.p1, internal, 74853, 74912
-recovered pasa_asmbl_53109.p1, internal, 75106, 75213
-recovered pasa_asmbl_53109.p1, internal, 75301, 75397
-recovered pasa_asmbl_53109.p1, internal, 75557, 75629
Valid prediction for pasa_asmbl_53129.p1
Valid prediction for snap_scaffold_8-snap.1927-T1
Valid prediction for CodingQuarry_transcript_59762-T1
Valid prediction for GlimmerHMM_glimmerT_20363-T1
Valid prediction for GlimmerHMM_glimmerT_20356-T1
Valid prediction for GlimmerHMM_glimmerT_20378-T1
Valid prediction for snap_scaffold_8-snap.1941-T1
Valid prediction for CodingQuarry_transcript_59757-T1
Valid prediction for Augustus_model.g13539.t1
Valid prediction for CodingQuarry_transcript_59768-T1
Valid prediction for snap_scaffold_8-snap.1943-T1
Valid prediction for snap_scaffold_8-snap.1907-T1
Valid prediction for snap_scaffold_8-snap.1930-T1
Valid prediction for CodingQuarry_transcript_59756-T1
Valid prediction for Augustus_model.g13538.t1
Valid prediction for snap_scaffold_8-snap.1940-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g13558.t1
Valid prediction for GlimmerHMM_glimmerT_20349-T1
Valid prediction for snap_scaffold_8-snap.1934-T1
Valid prediction for GlimmerHMM_glimmerT_20379-T1
Valid prediction for CodingQuarry_transcript_59766-T1
Valid prediction for snap_scaffold_8-snap.1950-T1
Valid prediction for HiQ_model.g13555.t1
Valid prediction for pasa_asmbl_52075.p1
Valid prediction for CodingQuarry_transcript_59778-T1
Valid prediction for Augustus_model.g13560.t1
Valid prediction for GlimmerHMM_glimmerT_20384-T1
Valid prediction for CodingQuarry_transcript_59779-T1
Valid prediction for GlimmerHMM_glimmerT_20369-T1
Valid prediction for GlimmerHMM_glimmerT_20376-T1
Valid prediction for Augustus_model.g13549.t1
Valid prediction for CodingQuarry_transcript_59765-T1
Valid prediction for GlimmerHMM_glimmerT_20352-T1
Valid prediction for snap_scaffold_8-snap.1904-T1
Valid prediction for CodingQuarry_transcript_59774-T1
Valid prediction for GlimmerHMM_glimmerT_20373-T1
Valid prediction for GlimmerHMM_glimmerT_20377-T1
Valid prediction for GlimmerHMM_glimmerT_20381-T1
Valid prediction for snap_scaffold_8-snap.1938-T1
Couldn't classify 56289, 56342
Sorry, prediction pasa_asmbl_52062.p1 fails validation.
(GCT)	 GT	56289-56342	GT	AGG
(AGT)	 AG	57607-57760	GT	AGG
(ACT)	 AG	57908-58185	GC	AGG
(CCA)	 AG	58314-58458	GT	TGG
(AGG)	 AG	58609-58901	GA	GAG
-recovered pasa_asmbl_52062.p1, terminal, 58609, 58901
-recovered pasa_asmbl_52062.p1, internal, 57607, 57760
-recovered pasa_asmbl_52062.p1, internal, 57908, 58185
-recovered pasa_asmbl_52062.p1, internal, 58314, 58458
Valid prediction for Augustus_model.g13553.t1
Couldn't classify 47155, 47164
Sorry, prediction pasa_asmbl_52069.p1 fails validation.
(TCA)	 CA	47155-47164	GT	TTG
(TAT)	 AG	47274-47704	GT	ACG
(GTT)	 AG	47788-47864	GT	AAG
(AGT)	 AG	47981-48065	GC	GAG
add_exon() Sorry, pasa_asmbl_52069.p1 47788-47864-terminal-2 is invalid.
-recovered pasa_asmbl_52069.p1, terminal, 47788, 47864
-recovered pasa_asmbl_52069.p1, terminal, 47981, 48065
-recovered pasa_asmbl_52069.p1, internal, 47274, 47704
-recovered pasa_asmbl_52069.p1, internal, 47788, 47864
-recovered pasa_asmbl_52069.p1, internal, 47981, 48065
Valid prediction for snap_scaffold_8-snap.1936-T1
Valid prediction for GlimmerHMM_glimmerT_20365-T1
Valid prediction for snap_scaffold_8-snap.1949-T1
Couldn't classify 19762, 19814
Sorry, prediction pasa_asmbl_52076.p1 fails validation.
(TAT)	 AC	19762-19814	GT	AGG
(AAT)	 AG	20163-20374	GT	AGG
(GTT)	 AG	20531-20671	GT	AGG
(ATC)	 AG	20872-20991	GT	TGG
(TCA)	 AG	21105-21245	GT	AGG
(TCC)	 AG	21392-21447	GT	TGG
(GGG)	 AG	21555-21621	GT	TGG
(TGG)	 AG	21703-21787	GT	AGG
(GTT)	 AG	21880-21982	GT	TAG
(CTG)	 AG	22341-22433	GT	AGG
(GTG)	 AG	22544-22676	GT	AGG
(GCC)	 AG	22765-22885	GT	AGG
(GTG)	 AG	22990-23048	GT	CAG
(GAG)	 AG	23156-23292	GT	AGG
(AAG)	 AG	23373-23396	TA	GAT
-recovered pasa_asmbl_52076.p1, terminal, 23373, 23396
-recovered pasa_asmbl_52076.p1, internal, 20163, 20374
-recovered pasa_asmbl_52076.p1, internal, 20531, 20671
-recovered pasa_asmbl_52076.p1, internal, 20872, 20991
-recovered pasa_asmbl_52076.p1, internal, 21105, 21245
-recovered pasa_asmbl_52076.p1, internal, 21392, 21447
-recovered pasa_asmbl_52076.p1, internal, 21555, 21621
-recovered pasa_asmbl_52076.p1, internal, 21703, 21787
-recovered pasa_asmbl_52076.p1, internal, 21880, 21982
-recovered pasa_asmbl_52076.p1, internal, 22341, 22433
-recovered pasa_asmbl_52076.p1, internal, 22544, 22676
-recovered pasa_asmbl_52076.p1, internal, 22765, 22885
-recovered pasa_asmbl_52076.p1, internal, 22990, 23048
-recovered pasa_asmbl_52076.p1, internal, 23156, 23292
Valid prediction for Augustus_model.g13564.t1
Valid prediction for snap_scaffold_8-snap.1918-T1
Valid prediction for pasa_asmbl_52072.p1
Valid prediction for GlimmerHMM_glimmerT_20354-T1
Valid prediction for Augustus_model.g13534.t1
Valid prediction for snap_scaffold_8-snap.1922-T1
Valid prediction for CodingQuarry_transcript_59777-T1
Valid prediction for CodingQuarry_transcript_59776-T1
Valid prediction for snap_scaffold_8-snap.1906-T1
Valid prediction for HiQ_model.g13556.t1
Valid prediction for snap_scaffold_8-snap.1917-T1
Valid prediction for Augustus_model.g13565.t1
Valid prediction for snap_scaffold_8-snap.1937-T1
Valid prediction for CodingQuarry_transcript_59772-T1
Valid prediction for Augustus_model.g13535.t1
Valid prediction for snap_scaffold_8-snap.1910-T1
Valid prediction for GlimmerHMM_glimmerT_20371-T1
Valid prediction for Augustus_model.g13537.t1
Valid prediction for snap_scaffold_8-snap.1915-T1
Valid prediction for pasa_asmbl_52068.p1
Valid prediction for GlimmerHMM_glimmerT_20350-T1
Valid prediction for pasa_asmbl_52084.p1
Valid prediction for Augustus_model.g13559.t1
Couldn't classify 11518, 11767
Sorry, prediction pasa_asmbl_52082.p1 fails validation.
(GCT)	 TA	11518-11767	GT	TGG
(TGG)	 AG	12173-12619	GT	AGG
(ACA)	 AG	12716-13116	GG	AGG
-recovered pasa_asmbl_52082.p1, terminal, 12716, 13116
-recovered pasa_asmbl_52082.p1, internal, 12173, 12619
Valid prediction for GlimmerHMM_glimmerT_20360-T1
Valid prediction for HiQ_model.g13563.t1
Valid prediction for GlimmerHMM_glimmerT_20348-T1
Valid prediction for snap_scaffold_8-snap.1908-T1
Valid prediction for HiQ_model.g13561.t1
Valid prediction for snap_scaffold_8-snap.1946-T1
Valid prediction for pasa_asmbl_52074.p1
Valid prediction for snap_scaffold_8-snap.1942-T1
Couldn't classify 85936, 86165
Sorry, prediction pasa_asmbl_52058.p1 fails validation.
(TCT)	 TT	85936-86165	GT	AGG
(TCA)	 AG	86292-86472	GT	AGG
(GAG)	 AG	86631-86744	GA	GAG
-recovered pasa_asmbl_52058.p1, terminal, 86631, 86744
-recovered pasa_asmbl_52058.p1, internal, 86292, 86472
Valid prediction for CodingQuarry_transcript_59764-T1
Couldn't classify 46246, 46374
Couldn't classify 46817, 47040
Sorry, prediction pasa_asmbl_52070.p1 fails validation.
(TTC)	 TG	46246-46374	GT	AGG
(GGG)	 AG	46628-46691	GT	AGG
(ATG)	 AG	46817-47040	AC	CCA
-recovered pasa_asmbl_52070.p1, internal, 46628, 46691
Valid prediction for GlimmerHMM_glimmerT_20382-T1
Valid prediction for GlimmerHMM_glimmerT_20364-T1
Valid prediction for CodingQuarry_transcript_59773-T1
Valid prediction for snap_scaffold_8-snap.1944-T1
Valid prediction for CodingQuarry_transcript_59775-T1
Valid prediction for GlimmerHMM_glimmerT_20370-T1
Valid prediction for GlimmerHMM_glimmerT_20383-T1
Valid prediction for GlimmerHMM_glimmerT_20374-T1
Valid prediction for snap_scaffold_8-snap.1928-T1
Valid prediction for snap_scaffold_8-snap.1909-T1
Valid prediction for snap_scaffold_8-snap.1924-T1
Valid prediction for snap_scaffold_8-snap.1921-T1
Valid prediction for snap_scaffold_8-snap.1939-T1
Valid prediction for snap_scaffold_8-snap.1952-T1
Couldn't classify 83958, 83980
Couldn't classify 84067, 84184
Couldn't classify 84493, 84630
Sorry, prediction pasa_asmbl_52061.p1 fails validation.
(GTC)	 AA	83958-83980	AT	AAA
(CTA)	 AC	84067-84184	GT	TGG
(GTA)	 AG	84275-84379	GT	CGG
(CTG)	 AG	84493-84630	GC	AAG
-recovered pasa_asmbl_52061.p1, internal, 84275, 84379
-recovered pasa_asmbl_52061.p1, internal, 84493, 84630
Valid prediction for GlimmerHMM_glimmerT_20375-T1
Valid prediction for HiQ_model.g13554.t1
Valid prediction for snap_scaffold_8-snap.1935-T1
Valid prediction for CodingQuarry_transcript_59771-T1
Couldn't classify 174176, 174274
Couldn't classify 175329, 175397
Sorry, prediction pasa_asmbl_52056.p1 fails validation.
(AAC)	 CT	174176-174274	GT	AGG
(GAA)	 AG	174821-174955	GT	AGG
(GAT)	 AG	175092-175226	GT	AGG
(ATG)	 AG	175329-175397	AA	GGA
-recovered pasa_asmbl_52056.p1, internal, 174821, 174955
-recovered pasa_asmbl_52056.p1, internal, 175092, 175226
Valid prediction for GlimmerHMM_glimmerT_20351-T1
Valid prediction for Augustus_model.g13533.t1
Valid prediction for pasa_asmbl_52063.p1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3983, rend_intergenic: 2501  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26572, rend_intergenic: 4498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49314, rend_intergenic: 40918  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71111, rend_intergenic: 65976  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75832, rend_intergenic: 71341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85600, rend_intergenic: 82735  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93414, rend_intergenic: 87726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101535, rend_intergenic: 100526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142797, rend_intergenic: 138979  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170800, rend_intergenic: 166778  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175276, rend_intergenic: 171507  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190118, rend_intergenic: 186381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208076, rend_intergenic: 204069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 210301
-exon list size: 660


building trellis

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3.3    
3.5    
3.6    
3.8    
3.9    
4.1    
4.2    
4.4    
4.5    
4.7    
4.8    
5.0    
5.1    
5.3    
5.4    
5.6    
5.7    
5.9    
6.0    
6.2    
6.3    
6.5    
6.6    
6.8    
6.9    
7.1    
7.3    
7.4    
7.6    
7.7    
7.9    
8.0    
8.2    
8.3    
8.5    
8.6    
8.8    
8.9    
9.1    
9.2    
9.4    
9.5    
9.7    
9.8    
10.0    
10.1    
10.3    
10.4    
10.6    
10.7    
10.9    
11.0    
11.2    
11.3    
11.5    
11.6    
11.8    
11.9    
12.1    
12.2    
12.4    
12.5    
12.7    
12.8    
13.0    
13.1    
13.3    
13.4    
13.6    
13.7    
13.9    
14.0    
14.2    
14.4    
14.5    
14.7    
14.8    
15.0    
15.1    
15.3    
15.4    
15.6    
15.7    
15.9    
16.0    
16.2    
16.3    
16.5    
16.6    
16.8    
16.9    
17.1    
17.2    
17.4    
17.5    
17.7    
17.8    
18.0    
18.1    
18.3    
18.4    
18.6    
18.7    
18.9    
19.0    
19.2    
19.3    
19.5    
19.6    
19.8    
19.9    
20.1    
20.2    
20.4    
20.5    
20.7    
20.8    
21.0    
21.1    
21.3    
21.5    
21.6    
21.8    
21.9    
22.1    
22.2    
22.4    
22.5    
22.7    
22.8    
23.0    
23.1    
23.3    
23.4    
23.6    
23.7    
23.9    
24.0    
24.2    
24.3    
24.5    
24.6    
24.8    
24.9    
25.1    
25.2    
25.4    
25.5    
25.7    
25.8    
26.0    
26.1    
26.3    
26.4    
26.6    
26.7    
26.9    
27.0    
27.2    
27.3    
27.5    
27.6    
27.8    
27.9    
28.1    
28.2    
28.4    
28.5    
28.7    
28.9    
29.0    
29.2    
29.3    
29.5    
29.6    
29.8    
29.9    
30.1    
30.2    
30.4    
30.5    
30.7    
30.8    
31.0    
31.1    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.2    
32.3    
32.5    
32.6    
32.8    
32.9    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
34.0    
34.1    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.2    
35.3    
35.5    
35.6    
35.8    
36.0    
36.1    
36.3    
36.4    
36.6    
36.7    
36.9    
37.0    
37.2    
37.3    
37.5    
37.6    
37.8    
37.9    
38.1    
38.2    
38.4    
38.5    
38.7    
38.8    
39.0    
39.1    
39.3    
39.4    
39.6    
39.7    
39.9    
40.0    
40.2    
40.3    
40.5    
40.6    
40.8    
40.9    
41.1    
41.2    
41.4    
41.5    
41.7    
41.8    
42.0    
42.1    
42.3    
42.4    
42.6    
42.7    
42.9    
43.1    
43.2    
43.4    
43.5    
43.7    
43.8    
44.0    
44.1    
44.3    
44.4    
44.6    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
45.9    
46.1    
46.2    
46.4    
46.5    
46.7    
46.8    
47.0    
47.1    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.5    
48.6    
48.8    
48.9    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.1    
51.2    
51.4    
51.5    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.9    
53.0    
53.2    
53.3    
53.5    
53.6    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.7    
55.9    
56.0    
56.2    
56.3    
56.5    
56.6    
56.8    
56.9    
57.1    
57.3    
57.4    
57.6    
57.7    
57.9    
58.0    
58.2    
58.3    
58.5    
58.6    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.7    
59.8    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.3    
61.5    
61.6    
61.8    
61.9    
62.1    
62.2    
62.4    
62.5    
62.7    
62.8    
63.0    
63.1    
63.3    
63.4    
63.6    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.8    
69.9    
70.1    
70.2    
70.4    
70.5    
70.7    
70.8    
71.0    
71.1    
71.3    
71.5    
71.6    
71.8    
71.9    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.5    
74.6    
74.8    
74.9    
75.1    
75.2    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.9    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.7    
78.9    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.4    
80.5    
80.7    
80.8    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.5    
85.6    
85.8    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.0    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.1    
88.2    
88.4    
88.5    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.9    
93.1    
93.2    
93.4    
93.5    
93.7    
93.8    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.2    
96.4    
96.5    
96.7    
96.8    
97.0    
97.1    
97.3    
97.4    
97.6    
97.7    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 42 predictions from path traversal
Error with prediction: snap lend_intergenic: 3983, rend_intergenic: 2501  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26572, rend_intergenic: 4498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49314, rend_intergenic: 40918  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71111, rend_intergenic: 65976  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75832, rend_intergenic: 71341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85600, rend_intergenic: 82735  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93414, rend_intergenic: 87726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101535, rend_intergenic: 100526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142797, rend_intergenic: 138979  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170800, rend_intergenic: 166778  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175276, rend_intergenic: 171507  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190118, rend_intergenic: 186381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208076, rend_intergenic: 204069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 39 predictions persist after filtering for low support