-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_8/scaffold_8_16032765-16264786 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_21068-T1 Valid prediction for snap_scaffold_8-snap.2916-T1 Valid prediction for Augustus_model.g14014.t1 Valid prediction for snap_scaffold_8-snap.2927-T1 Valid prediction for CodingQuarry_transcript_59920-T1 Valid prediction for HiQ_model.g14001.t1 Valid prediction for snap_scaffold_8-snap.2947-T1 Couldn't classify 91136, 91200 Sorry, prediction pasa_asmbl_53427.p1 fails validation. (AGA) AG 91136-91200 GT GAG (GCA) AG 91292-91560 GT CAG (GCA) AG 91695-91784 GT AGG (GGG) AG 91897-91982 GT AGG (GAC) AG 92101-92271 GT AGG (TTG) AG 92387-92532 GT AAG (GGA) AG 92690-92843 CA GAC add_exon() Sorry, pasa_asmbl_53427.p1 91695-91784-terminal-1 is invalid. -recovered pasa_asmbl_53427.p1, terminal, 91695, 91784 -recovered pasa_asmbl_53427.p1, terminal, 92690, 92843 -recovered pasa_asmbl_53427.p1, internal, 91136, 91200 -recovered pasa_asmbl_53427.p1, internal, 91292, 91560 -recovered pasa_asmbl_53427.p1, internal, 91695, 91784 -recovered pasa_asmbl_53427.p1, internal, 91897, 91982 -recovered pasa_asmbl_53427.p1, internal, 92101, 92271 -recovered pasa_asmbl_53427.p1, internal, 92387, 92532 Valid prediction for snap_scaffold_8-snap.2937-T1 Valid prediction for GlimmerHMM_glimmerT_21058-T1 Valid prediction for GlimmerHMM_glimmerT_21071-T1 Valid prediction for pasa_asmbl_53429.p1 Valid prediction for snap_scaffold_8-snap.2940-T1 Valid prediction for pasa_asmbl_53440.p1 Valid prediction for GlimmerHMM_glimmerT_21078-T1 Valid prediction for snap_scaffold_8-snap.2926-T1 Valid prediction for snap_scaffold_8-snap.2944-T1 Valid prediction for snap_scaffold_8-snap.2917-T1 Valid prediction for pasa_asmbl_53433.p1 Valid prediction for HiQ_model.g14002.t1 Valid prediction for snap_scaffold_8-snap.2950-T1 Valid prediction for Augustus_model.g14004.t1 Valid prediction for CodingQuarry_transcript_59917-T1 Valid prediction for snap_scaffold_8-snap.2932-T1 Valid prediction for HiQ_model.g14018.t1 Valid prediction for snap_scaffold_8-snap.2919-T1 Valid prediction for pasa_asmbl_53424.p1 Valid prediction for GlimmerHMM_glimmerT_21063-T1 Valid prediction for GlimmerHMM_glimmerT_21054-T1 Valid prediction for GlimmerHMM_glimmerT_21055-T1 Valid prediction for snap_scaffold_8-snap.2942-T1 Valid prediction for Augustus_model.g13999.t1 Valid prediction for GlimmerHMM_glimmerT_21060-T1 Valid prediction for pasa_asmbl_53437.p1 Valid prediction for Augustus_model.g14005.t1 Valid prediction for snap_scaffold_8-snap.2945-T1 Couldn't classify 97911, 98026 Sorry, prediction pasa_asmbl_53428.p1 fails validation. (ATG) AG 96419-96556 GT AAG (ATC) AG 96753-96980 GT AGG (GGA) AG 97085-97231 GT AGG (TCT) AG 97538-97646 GT AGG (CCA) AG 97911-98026 NC NNN -recovered pasa_asmbl_53428.p1, initial, 96419, 96556 -recovered pasa_asmbl_53428.p1, internal, 96419, 96556 -recovered pasa_asmbl_53428.p1, internal, 96753, 96980 -recovered pasa_asmbl_53428.p1, internal, 97085, 97231 -recovered pasa_asmbl_53428.p1, internal, 97538, 97646 Couldn't classify 84934, 85006 Sorry, prediction pasa_asmbl_53425.p1 fails validation. (GGA) CT 84934-85006 GT AGG (TTG) AG 85099-85197 GT AGG (AGA) AG 85407-85597 GT AGG (GTA) AG 85726-85797 GT AGG (ATT) AG 85882-85983 GT AGG (GCA) AG 86082-86157 GT AAG (GAG) AG 86244-86369 GT AGG (GAG) AG 86515-86694 GT AGG (GAG) AG 86794-87005 TT AGT -recovered pasa_asmbl_53425.p1, terminal, 86794, 87005 -recovered pasa_asmbl_53425.p1, internal, 85099, 85197 -recovered pasa_asmbl_53425.p1, internal, 85407, 85597 -recovered pasa_asmbl_53425.p1, internal, 85726, 85797 -recovered pasa_asmbl_53425.p1, internal, 85882, 85983 -recovered pasa_asmbl_53425.p1, internal, 86082, 86157 -recovered pasa_asmbl_53425.p1, internal, 86244, 86369 -recovered pasa_asmbl_53425.p1, internal, 86515, 86694 Valid prediction for Augustus_model.g14003.t1 Valid prediction for snap_scaffold_8-snap.2922-T1 Valid prediction for GlimmerHMM_glimmerT_21056-T1 Valid prediction for snap_scaffold_8-snap.2936-T1 Valid prediction for GlimmerHMM_glimmerT_21057-T1 Valid prediction for Augustus_model.g14017.t1 Valid prediction for GlimmerHMM_glimmerT_21061-T1 Valid prediction for GlimmerHMM_glimmerT_21051-T1 Valid prediction for HiQ_model.g14016.t1 Valid prediction for snap_scaffold_8-snap.2923-T1 Valid prediction for snap_scaffold_8-snap.2925-T1 Valid prediction for snap_scaffold_8-snap.2953-T1 Valid prediction for snap_scaffold_8-snap.2931-T1 Valid prediction for snap_scaffold_8-snap.2924-T1 Valid prediction for GlimmerHMM_glimmerT_21073-T1 Valid prediction for GlimmerHMM_glimmerT_21079-T1 Valid prediction for snap_scaffold_8-snap.2941-T1 Valid prediction for CodingQuarry_transcript_59916-T1 Valid prediction for GlimmerHMM_glimmerT_21075-T1 Valid prediction for Augustus_model.g14007.t1 Valid prediction for GlimmerHMM_glimmerT_21072-T1 Valid prediction for CodingQuarry_transcript_59919-T1 Valid prediction for snap_scaffold_8-snap.2928-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_8-snap.2929-T1 Valid prediction for GlimmerHMM_glimmerT_21048-T1 Couldn't classify 23946, 24121 Sorry, prediction pasa_asmbl_52378.p1 fails validation. (AGA) AC 23946-24121 GT GGG (GTA) AG 24409-24540 GT AGG (TAA) AG 24658-24904 CA AAC -recovered pasa_asmbl_52378.p1, terminal, 24658, 24904 -recovered pasa_asmbl_52378.p1, internal, 24409, 24540 Valid prediction for GlimmerHMM_glimmerT_21047-T1 Valid prediction for GlimmerHMM_glimmerT_21077-T1 Couldn't classify 28669, 28720 Sorry, prediction pasa_asmbl_52374.p1 fails validation. (GAG) AC 28669-28720 GT AGG (CCA) AG 28840-28918 GT ACG (AAA) AG 29000-29171 TC GAT -recovered pasa_asmbl_52374.p1, terminal, 29000, 29171 -recovered pasa_asmbl_52374.p1, internal, 28840, 28918 Valid prediction for GlimmerHMM_glimmerT_21076-T1 Valid prediction for GlimmerHMM_glimmerT_21043-T1 Valid prediction for GlimmerHMM_glimmerT_21066-T1 Valid prediction for Augustus_model.g14020.t1 Couldn't classify 180893, 180998 Couldn't classify 185037, 185312 Sorry, prediction pasa_asmbl_52359.p1 fails validation. (TTC) TC 180893-180998 GT GCG (ACT) AG 183637-183824 GT AGG (GCC) AG 185037-185312 TG CTT -recovered pasa_asmbl_52359.p1, internal, 183637, 183824 Valid prediction for Augustus_model.g13998.t1 Valid prediction for snap_scaffold_8-snap.2920-T1 Valid prediction for GlimmerHMM_glimmerT_21074-T1 Valid prediction for snap_scaffold_8-snap.2935-T1 Valid prediction for HiQ_model.g14000.t1 Valid prediction for Augustus_model.g13995.t1 Valid prediction for Augustus_model.g14006.t1 Couldn't classify 200397, 200412 Sorry, prediction pasa_asmbl_52357.p1 fails validation. (ATG) AC 199396-199523 GT GGG (GCT) AG 199760-199974 GT AAG (ACT) AG 200129-200279 GT AGG (ACA) AG 200397-200412 GG GTG -recovered pasa_asmbl_52357.p1, initial, 199396, 199523 -recovered pasa_asmbl_52357.p1, internal, 199760, 199974 -recovered pasa_asmbl_52357.p1, internal, 200129, 200279 Valid prediction for snap_scaffold_8-snap.2938-T1 Valid prediction for snap_scaffold_8-snap.2952-T1 Valid prediction for Augustus_model.g14021.t1 Valid prediction for snap_scaffold_8-snap.2933-T1 Valid prediction for CodingQuarry_transcript_59915-T1 Valid prediction for GlimmerHMM_glimmerT_21080-T1 Valid prediction for GlimmerHMM_glimmerT_21045-T1 Valid prediction for snap_scaffold_8-snap.2943-T1 Valid prediction for pasa_asmbl_52354.p1 Couldn't classify 102834, 103004 Couldn't classify 107570, 107656 Sorry, prediction pasa_asmbl_52369.p1 fails validation. (AAA) AG 102834-103004 GT AGG (GAG) AG 103159-103427 GC AGG (TAT) AG 104762-104934 GT AGG (GCA) AG 105253-105326 GT AGG (CCT) AG 107570-107656 GA AGG -recovered pasa_asmbl_52369.p1, internal, 102834, 103004 -recovered pasa_asmbl_52369.p1, internal, 103159, 103427 -recovered pasa_asmbl_52369.p1, internal, 104762, 104934 -recovered pasa_asmbl_52369.p1, internal, 105253, 105326 Valid prediction for snap_scaffold_8-snap.2934-T1 Valid prediction for Augustus_model.g14008.t1 Valid prediction for Augustus_model.g14015.t1 Valid prediction for Augustus_model.g14013.t1 Valid prediction for snap_scaffold_8-snap.2939-T1 Valid prediction for snap_scaffold_8-snap.2949-T1 Valid prediction for GlimmerHMM_glimmerT_21049-T1 Valid prediction for GlimmerHMM_glimmerT_21082-T1 Valid prediction for snap_scaffold_8-snap.2921-T1 Valid prediction for snap_scaffold_8-snap.2913-T1 Valid prediction for HiQ_model.g14019.t1 Valid prediction for GlimmerHMM_glimmerT_21062-T1 Valid prediction for GlimmerHMM_glimmerT_21064-T1 Valid prediction for Augustus_model.g14011.t1 Valid prediction for snap_scaffold_8-snap.2918-T1 Valid prediction for snap_scaffold_8-snap.2911-T1 Valid prediction for snap_scaffold_8-snap.2915-T1 Valid prediction for GlimmerHMM_glimmerT_21065-T1 Valid prediction for pasa_asmbl_52362.p1 Valid prediction for CodingQuarry_transcript_59914-T1 Valid prediction for Augustus_model.g14009.t1 Couldn't classify 84780, 84791 Couldn't classify 87015, 87032 Sorry, prediction pasa_asmbl_52370.p1 fails validation. (GCC) CA 84780-84791 GT TGG (GTT) AG 85023-85100 GT TGG (GAT) AG 85438-85551 GT AGG (ACT) AG 86457-86585 GT AGG (CTG) AG 86693-86791 GT ATG (GAA) AG 87015-87032 AT ACA -recovered pasa_asmbl_52370.p1, internal, 85023, 85100 -recovered pasa_asmbl_52370.p1, internal, 85438, 85551 -recovered pasa_asmbl_52370.p1, internal, 86457, 86585 -recovered pasa_asmbl_52370.p1, internal, 86693, 86791 Valid prediction for snap_scaffold_8-snap.2948-T1 Valid prediction for snap_scaffold_8-snap.2912-T1 Couldn't classify 28442, 28458 Sorry, prediction pasa_asmbl_52375.p1 fails validation. (ATG) CG 26895-26979 GT ATG (TTT) AG 27443-27623 GT AGG (GTT) AG 27775-27914 GT AGG (AGT) AG 28442-28458 GC ATG -recovered pasa_asmbl_52375.p1, initial, 26895, 26979 -recovered pasa_asmbl_52375.p1, internal, 27443, 27623 -recovered pasa_asmbl_52375.p1, internal, 27775, 27914 -recovered pasa_asmbl_52375.p1, internal, 28442, 28458 Valid prediction for snap_scaffold_8-snap.2951-T1 Couldn't classify 107750, 107765 Couldn't classify 111520, 111719 Sorry, prediction pasa_asmbl_52368.p1 fails validation. (CCC) CC 107750-107765 GT AGG (TAG) AG 108208-108335 GT AGG (CTG) AG 110328-110503 GT AGG (GAC) AG 111114-111247 GT AGG (TGT) AG 111520-111719 AG GCA -recovered pasa_asmbl_52368.p1, internal, 108208, 108335 -recovered pasa_asmbl_52368.p1, internal, 110328, 110503 -recovered pasa_asmbl_52368.p1, internal, 111114, 111247 Valid prediction for GlimmerHMM_glimmerT_21070-T1 Valid prediction for GlimmerHMM_glimmerT_21081-T1 Valid prediction for Augustus_model.g14010.t1 Valid prediction for GlimmerHMM_glimmerT_21067-T1 Valid prediction for GlimmerHMM_glimmerT_21044-T1 Valid prediction for snap_scaffold_8-snap.2946-T1 Valid prediction for Augustus_model.g14022.t1 Valid prediction for CodingQuarry_transcript_59913-T1 Valid prediction for Augustus_model.g14012.t1 Valid prediction for snap_scaffold_8-snap.2914-T1 Valid prediction for snap_scaffold_8-snap.2954-T1 Valid prediction for GlimmerHMM_glimmerT_21046-T1 Couldn't classify 186850, 187092 Sorry, prediction pasa_asmbl_52358.p1 fails validation. (GTG) GT 186850-187092 GT AGG (GCC) AG 187223-187457 GT TGG (AGA) AG 188474-188624 GT AAG (GTG) AG 188928-189021 GT AGG (AAG) AG 190117-190248 GT AGG (ACC) AG 190385-190537 GT AGG (GGG) AG 190647-190734 GT TGG (GTC) AG 190932-191016 GT AGG (GCA) AG 192443-192571 GT AAG (GAA) AG 193136-193257 GT CAG (TGA) AG 193466-193611 GT AAG (TGC) AG 193719-193837 GT AAG (ATT) AG 194079-194260 GT AAG (AGT) AG 194734-194816 GT AGG (AGG) AG 194969-195092 GT AGG (AAA) AG 195197-195365 GT AGG (GGA) AG 195950-196133 GC AGG add_exon() Sorry, pasa_asmbl_52358.p1 194969-195092-terminal-3 is invalid. -recovered pasa_asmbl_52358.p1, terminal, 194969, 195092 -recovered pasa_asmbl_52358.p1, terminal, 195950, 196133 -recovered pasa_asmbl_52358.p1, internal, 187223, 187457 -recovered pasa_asmbl_52358.p1, internal, 188474, 188624 -recovered pasa_asmbl_52358.p1, internal, 188928, 189021 -recovered pasa_asmbl_52358.p1, internal, 190117, 190248 -recovered pasa_asmbl_52358.p1, internal, 190385, 190537 -recovered pasa_asmbl_52358.p1, internal, 190647, 190734 -recovered pasa_asmbl_52358.p1, internal, 190932, 191016 -recovered pasa_asmbl_52358.p1, internal, 192443, 192571 -recovered pasa_asmbl_52358.p1, internal, 193136, 193257 -recovered pasa_asmbl_52358.p1, internal, 193466, 193611 -recovered pasa_asmbl_52358.p1, internal, 193719, 193837 -recovered pasa_asmbl_52358.p1, internal, 194079, 194260 -recovered pasa_asmbl_52358.p1, internal, 194734, 194816 -recovered pasa_asmbl_52358.p1, internal, 194969, 195092 -recovered pasa_asmbl_52358.p1, internal, 195197, 195365 -recovered pasa_asmbl_52358.p1, internal, 195950, 196133 Valid prediction for snap_scaffold_8-snap.2930-T1 Valid prediction for GlimmerHMM_glimmerT_21050-T1 Couldn't classify 180326, 180481 Sorry, prediction pasa_asmbl_52564.p1 fails validation. (ATG) GC 178763-178937 GT ATG (GTG) AG 180055-180164 GT TGG (CTG) AG 180326-180481 AT CCA -recovered pasa_asmbl_52564.p1, initial, 178763, 178937 -recovered pasa_asmbl_52564.p1, internal, 180055, 180164 Valid prediction for HiQ_model.g13993.t1 Valid prediction for GlimmerHMM_glimmerT_21059-T1 Couldn't classify 186877, 187092 Sorry, prediction HiQ_model.g13997.t1 fails validation. (CTG) AG 186877-187092 GT AGG (GCC) AG 187223-187457 GT TGG (AGA) AG 188474-188624 GT AAG (GTG) AG 188928-189021 GT AGG (AAG) AG 190117-190248 GT AGG (ACC) AG 190385-190537 GT AGG (GGG) AG 190647-190734 GT TGG (GTC) AG 190932-191016 GT AGG (GCA) AG 192443-192571 GT AAG (GAA) AG 193136-193257 GT CAG (TGA) AG 193466-193611 GT AAG (TGC) AG 193719-193837 GT AAG (ATT) AG 194079-194260 GT AAG (AGT) AG 194734-194816 GT AGG (AGG) AG 194969-195092 GT AGG (AAA) AG 195197-195365 GT AGG (GGA) AG 195950-196133 GC AGG add_exon() Sorry, HiQ_model.g13997.t1 194969-195092-terminal-3 is invalid. -recovered HiQ_model.g13997.t1, terminal, 194969, 195092 -recovered HiQ_model.g13997.t1, terminal, 195950, 196133 -recovered HiQ_model.g13997.t1, internal, 186877, 187092 -recovered HiQ_model.g13997.t1, internal, 187223, 187457 -recovered HiQ_model.g13997.t1, internal, 188474, 188624 -recovered HiQ_model.g13997.t1, internal, 188928, 189021 -recovered HiQ_model.g13997.t1, internal, 190117, 190248 -recovered HiQ_model.g13997.t1, internal, 190385, 190537 -recovered HiQ_model.g13997.t1, internal, 190647, 190734 -recovered HiQ_model.g13997.t1, internal, 190932, 191016 -recovered HiQ_model.g13997.t1, internal, 192443, 192571 -recovered HiQ_model.g13997.t1, internal, 193136, 193257 -recovered HiQ_model.g13997.t1, internal, 193466, 193611 -recovered HiQ_model.g13997.t1, internal, 193719, 193837 -recovered HiQ_model.g13997.t1, internal, 194079, 194260 -recovered HiQ_model.g13997.t1, internal, 194734, 194816 -recovered HiQ_model.g13997.t1, internal, 194969, 195092 -recovered HiQ_model.g13997.t1, internal, 195197, 195365 -recovered HiQ_model.g13997.t1, internal, 195950, 196133 Couldn't classify 18635, 19105 Sorry, prediction pasa_asmbl_52376.p1 fails validation. (AAG) GG 18635-19105 GT AGG (GAA) AG 19332-19407 GT AGG (GCC) AG 19815-19941 GT TGG (CGC) AG 20038-20068 GT AGG (AAC) AG 21142-21282 GT AGG (GCC) AG 21416-21547 GT AGG (GAG) AG 22143-22296 GT GGG (ATG) AG 22447-22496 GT AGG (GCT) AG 22669-22845 GT TAG (TGT) AG 22937-23001 GT AGG (TGG) AG 23990-24121 GT GGG (GTA) AG 24409-24540 GT AGG (TAA) AG 24658-24904 CA AAC add_exon() Sorry, pasa_asmbl_52376.p1 22447-22496-initial-1 is invalid. -recovered pasa_asmbl_52376.p1, initial, 22447, 22496 -recovered pasa_asmbl_52376.p1, terminal, 24658, 24904 -recovered pasa_asmbl_52376.p1, internal, 19332, 19407 -recovered pasa_asmbl_52376.p1, internal, 19815, 19941 -recovered pasa_asmbl_52376.p1, internal, 20038, 20068 -recovered pasa_asmbl_52376.p1, internal, 21142, 21282 -recovered pasa_asmbl_52376.p1, internal, 21416, 21547 -recovered pasa_asmbl_52376.p1, internal, 22143, 22296 -recovered pasa_asmbl_52376.p1, internal, 22447, 22496 -recovered pasa_asmbl_52376.p1, internal, 22669, 22845 -recovered pasa_asmbl_52376.p1, internal, 22937, 23001 -recovered pasa_asmbl_52376.p1, internal, 23990, 24121 -recovered pasa_asmbl_52376.p1, internal, 24409, 24540 Valid prediction for GlimmerHMM_glimmerT_21083-T1 Valid prediction for Augustus_model.g13994.t1 Valid prediction for pasa_asmbl_52364.p1 Valid prediction for HiQ_model.g13996.t1 Valid prediction for GlimmerHMM_glimmerT_21053-T1 Valid prediction for GlimmerHMM_glimmerT_21052-T1 Valid prediction for GlimmerHMM_glimmerT_21069-T1 Valid prediction for snap_scaffold_8-snap.2955-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 45617, rend_intergenic: 39463 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109867, rend_intergenic: 107800 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128331, rend_intergenic: 118936 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139830, rend_intergenic: 137227 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165523, rend_intergenic: 159771 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197719, rend_intergenic: 197085 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 216113, rend_intergenic: 213830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229794, rend_intergenic: 226768 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 232022 -exon list size: 595 building trellis 0.2 0.3 0.5 0.7 0.8 1.0 1.2 1.3 1.5 1.7 1.8 2.0 2.2 2.3 2.5 2.7 2.8 3.0 3.2 3.4 3.5 3.7 3.9 4.0 4.2 4.4 4.5 4.7 4.9 5.0 5.2 5.4 5.5 5.7 5.9 6.0 6.2 6.4 6.5 6.7 6.9 7.0 7.2 7.4 7.5 7.7 7.9 8.0 8.2 8.4 8.5 8.7 8.9 9.0 9.2 9.4 9.5 9.7 9.9 10.1 10.2 10.4 10.6 10.7 10.9 11.1 11.2 11.4 11.6 11.7 11.9 12.1 12.2 12.4 12.6 12.7 12.9 13.1 13.2 13.4 13.6 13.7 13.9 14.1 14.2 14.4 14.6 14.7 14.9 15.1 15.2 15.4 15.6 15.7 15.9 16.1 16.2 16.4 16.6 16.8 16.9 17.1 17.3 17.4 17.6 17.8 17.9 18.1 18.3 18.4 18.6 18.8 18.9 19.1 19.3 19.4 19.6 19.8 19.9 20.1 20.3 20.4 20.6 20.8 20.9 21.1 21.3 21.4 21.6 21.8 21.9 22.1 22.3 22.4 22.6 22.8 22.9 23.1 23.3 23.5 23.6 23.8 24.0 24.1 24.3 24.5 24.6 24.8 25.0 25.1 25.3 25.5 25.6 25.8 26.0 26.1 26.3 26.5 26.6 26.8 27.0 27.1 27.3 27.5 27.6 27.8 28.0 28.1 28.3 28.5 28.6 28.8 29.0 29.1 29.3 29.5 29.6 29.8 30.0 30.2 30.3 30.5 30.7 30.8 31.0 31.2 31.3 31.5 31.7 31.8 32.0 32.2 32.3 32.5 32.7 32.8 33.0 33.2 33.3 33.5 33.7 33.8 34.0 34.2 34.3 34.5 34.7 34.8 35.0 35.2 35.3 35.5 35.7 35.8 36.0 36.2 36.3 36.5 36.7 36.9 37.0 37.2 37.4 37.5 37.7 37.9 38.0 38.2 38.4 38.5 38.7 38.9 39.0 39.2 39.4 39.5 39.7 39.9 40.0 40.2 40.4 40.5 40.7 40.9 41.0 41.2 41.4 41.5 41.7 41.9 42.0 42.2 42.4 42.5 42.7 42.9 43.0 43.2 43.4 43.6 43.7 43.9 44.1 44.2 44.4 44.6 44.7 44.9 45.1 45.2 45.4 45.6 45.7 45.9 46.1 46.2 46.4 46.6 46.7 46.9 47.1 47.2 47.4 47.6 47.7 47.9 48.1 48.2 48.4 48.6 48.7 48.9 49.1 49.2 49.4 49.6 49.7 49.9 50.1 50.3 50.4 50.6 50.8 50.9 51.1 51.3 51.4 51.6 51.8 51.9 52.1 52.3 52.4 52.6 52.8 52.9 53.1 53.3 53.4 53.6 53.8 53.9 54.1 54.3 54.4 54.6 54.8 54.9 55.1 55.3 55.4 55.6 55.8 55.9 56.1 56.3 56.4 56.6 56.8 57.0 57.1 57.3 57.5 57.6 57.8 58.0 58.1 58.3 58.5 58.6 58.8 59.0 59.1 59.3 59.5 59.6 59.8 60.0 60.1 60.3 60.5 60.6 60.8 61.0 61.1 61.3 61.5 61.6 61.8 62.0 62.1 62.3 62.5 62.6 62.8 63.0 63.1 63.3 63.5 63.7 63.8 64.0 64.2 64.3 64.5 64.7 64.8 65.0 65.2 65.3 65.5 65.7 65.8 66.0 66.2 66.3 66.5 66.7 66.8 67.0 67.2 67.3 67.5 67.7 67.8 68.0 68.2 68.3 68.5 68.7 68.8 69.0 69.2 69.3 69.5 69.7 69.8 70.0 70.2 70.4 70.5 70.7 70.9 71.0 71.2 71.4 71.5 71.7 71.9 72.0 72.2 72.4 72.5 72.7 72.9 73.0 73.2 73.4 73.5 73.7 73.9 74.0 74.2 74.4 74.5 74.7 74.9 75.0 75.2 75.4 75.5 75.7 75.9 76.0 76.2 76.4 76.5 76.7 76.9 77.1 77.2 77.4 77.6 77.7 77.9 78.1 78.2 78.4 78.6 78.7 78.9 79.1 79.2 79.4 79.6 79.7 79.9 80.1 80.2 80.4 80.6 80.7 80.9 81.1 81.2 81.4 81.6 81.7 81.9 82.1 82.2 82.4 82.6 82.7 82.9 83.1 83.2 83.4 83.6 83.8 83.9 84.1 84.3 84.4 84.6 84.8 84.9 85.1 85.3 85.4 85.6 85.8 85.9 86.1 86.3 86.4 86.6 86.8 86.9 87.1 87.3 87.4 87.6 87.8 87.9 88.1 88.3 88.4 88.6 88.8 88.9 89.1 89.3 89.4 89.6 89.8 89.9 90.1 90.3 90.5 90.6 90.8 91.0 91.1 91.3 91.5 91.6 91.8 92.0 92.1 92.3 92.5 92.6 92.8 93.0 93.1 93.3 93.5 93.6 93.8 94.0 94.1 94.3 94.5 94.6 94.8 95.0 95.1 95.3 95.5 95.6 95.8 96.0 96.1 96.3 96.5 96.6 96.8 97.0 97.2 97.3 97.5 97.7 97.8 98.0 98.2 98.3 98.5 98.7 98.8 99.0 99.2 99.3 99.5 99.7 99.8 -found 40 predictions from path traversal Error with prediction: snap lend_intergenic: 45617, rend_intergenic: 39463 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109867, rend_intergenic: 107800 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128331, rend_intergenic: 118936 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139830, rend_intergenic: 137227 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165523, rend_intergenic: 159771 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197719, rend_intergenic: 197085 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 216113, rend_intergenic: 213830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229794, rend_intergenic: 226768 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 35 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 11018 -exon list size: 3 building trellis 20.0 40.0 60.0 80.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support