-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_8/scaffold_8_12544279-12779579

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for pasa_asmbl_53341.p1
Couldn't classify 152170, 152940
Sorry, prediction pasa_asmbl_53334.p1 fails validation.
(ATT)	 AC	152170-152940	GT	GGG
(GAG)	 AG	153121-153259	GT	GGG
(GGA)	 AG	153355-153585	GT	AGG
(AGG)	 AG	153694-153781	GT	CGG
(GAG)	 AG	153877-154012	TG	GAT
-recovered pasa_asmbl_53334.p1, terminal, 153877, 154012
-recovered pasa_asmbl_53334.p1, internal, 153121, 153259
-recovered pasa_asmbl_53334.p1, internal, 153355, 153585
-recovered pasa_asmbl_53334.p1, internal, 153694, 153781
Valid prediction for CodingQuarry_transcript_59856-T1
Valid prediction for snap_scaffold_8-snap.2286-T1
Couldn't classify 16202, 16258
Couldn't classify 17358, 17433
Sorry, prediction pasa_asmbl_53318.p1 fails validation.
(TTC)	 GC	16202-16258	GT	AGG
(TCC)	 AG	16400-16569	GT	AGG
(CGT)	 AG	17358-17433	GA	GGG
-recovered pasa_asmbl_53318.p1, internal, 16400, 16569
Valid prediction for Augustus_model.g13747.t1
Valid prediction for GlimmerHMM_glimmerT_20626-T1
Valid prediction for snap_scaffold_8-snap.2295-T1
Valid prediction for GlimmerHMM_glimmerT_20602-T1
Valid prediction for CodingQuarry_transcript_59854-T1
Valid prediction for GlimmerHMM_glimmerT_20623-T1
Valid prediction for Augustus_model.g13758.t1
Couldn't classify 22654, 22749
Couldn't classify 25702, 25819
Sorry, prediction pasa_asmbl_53320.p1 fails validation.
(TCT)	 TC	22654-22749	GT	AGG
(GTA)	 AG	24196-24390	GT	AGG
(AGG)	 AG	24572-24723	GT	AGG
(GAA)	 AG	25702-25819	GT	AGG
-recovered pasa_asmbl_53320.p1, internal, 24196, 24390
-recovered pasa_asmbl_53320.p1, internal, 24572, 24723
-recovered pasa_asmbl_53320.p1, internal, 25702, 25819
Valid prediction for GlimmerHMM_glimmerT_20605-T1
Couldn't classify 187958, 188123
Sorry, prediction pasa_asmbl_53580.p1 fails validation.
(CTG)	 CA	187958-188123	GT	AGG
(GAG)	 AG	188218-188273	GT	AAG
(GCA)	 AG	188416-188656	GT	AGG
(GGT)	 AG	188752-188882	AA	GAA
-recovered pasa_asmbl_53580.p1, terminal, 188752, 188882
-recovered pasa_asmbl_53580.p1, internal, 188218, 188273
-recovered pasa_asmbl_53580.p1, internal, 188416, 188656
Valid prediction for snap_scaffold_8-snap.2303-T1
Valid prediction for snap_scaffold_8-snap.2314-T1
Couldn't classify 127032, 127127
Sorry, prediction pasa_asmbl_53322.p1 fails validation.
(GTC)	 AT	127032-127127	GT	AGG
(GTA)	 AG	127219-127317	GT	AGG
(GTG)	 AG	127429-127722	GT	TTG
(GTC)	 AG	127812-129377	TT	AAT
-recovered pasa_asmbl_53322.p1, terminal, 127812, 129377
-recovered pasa_asmbl_53322.p1, internal, 127219, 127317
-recovered pasa_asmbl_53322.p1, internal, 127429, 127722
Valid prediction for snap_scaffold_8-snap.2309-T1
Valid prediction for GlimmerHMM_glimmerT_20614-T1
Valid prediction for snap_scaffold_8-snap.2293-T1
Valid prediction for GlimmerHMM_glimmerT_20601-T1
Valid prediction for CodingQuarry_transcript_59853-T1
Valid prediction for HiQ_model.g13762.t1
Valid prediction for CodingQuarry_transcript_59855-T1
Valid prediction for GlimmerHMM_glimmerT_20606-T1
Valid prediction for Augustus_model.g13753.t1
Valid prediction for snap_scaffold_8-snap.2294-T1
Valid prediction for snap_scaffold_8-snap.2301-T1
Valid prediction for CodingQuarry_transcript_59861-T1
Valid prediction for Augustus_model.g13741.t1
Valid prediction for snap_scaffold_8-snap.2281-T1
Valid prediction for pasa_asmbl_53328.p1
Valid prediction for GlimmerHMM_glimmerT_20603-T1
Valid prediction for snap_scaffold_8-snap.2287-T1
Couldn't classify 137843, 137908
Couldn't classify 138149, 138217
Sorry, prediction CodingQuarry_transcript_59850-T1 fails validation.
(ATG)	 CG	137843-137908	CT	ACC
(CCA)	 AC	138149-138217	CT	GAC
Valid prediction for CodingQuarry_transcript_59852-T1
Valid prediction for snap_scaffold_8-snap.2299-T1
Couldn't classify 26410, 26448
Sorry, prediction pasa_asmbl_53321.p1 fails validation.
(ATT)	 CC	26410-26448	GT	AGG
(AAC)	 AG	27616-27813	GT	AGG
(CTG)	 AG	28149-28363	GT	AGG
(CTG)	 AG	28578-29087	GT	AGG
(GCG)	 AG	29194-29295	GT	GGG
(AGT)	 AG	31038-31215	CC	AGC
-recovered pasa_asmbl_53321.p1, terminal, 31038, 31215
-recovered pasa_asmbl_53321.p1, internal, 27616, 27813
-recovered pasa_asmbl_53321.p1, internal, 28149, 28363
-recovered pasa_asmbl_53321.p1, internal, 28578, 29087
-recovered pasa_asmbl_53321.p1, internal, 29194, 29295
Valid prediction for snap_scaffold_8-snap.2311-T1
Valid prediction for CodingQuarry_transcript_59862-T1
Valid prediction for Augustus_model.g13752.t1
Valid prediction for GlimmerHMM_glimmerT_20598-T1
Valid prediction for GlimmerHMM_glimmerT_20619-T1
Valid prediction for Augustus_model.g13745.t1
Valid prediction for snap_scaffold_8-snap.2298-T1
Valid prediction for GlimmerHMM_glimmerT_20600-T1
Valid prediction for HiQ_model.g13767.t1
Valid prediction for Augustus_model.g13757.t1
Valid prediction for GlimmerHMM_glimmerT_20610-T1
Valid prediction for Augustus_model.g13769.t1
Valid prediction for GlimmerHMM_glimmerT_20613-T1
Valid prediction for HiQ_model.g13756.t1
Valid prediction for GlimmerHMM_glimmerT_20615-T1
Valid prediction for snap_scaffold_8-snap.2297-T1
Couldn't classify 159042, 159233
Sorry, prediction pasa_asmbl_53336.p1 fails validation.
(CTG)	 GC	159042-159233	GT	AGG
(ATC)	 AG	160504-160605	GT	AGG
(GCT)	 AG	160808-160942	TA	GAT
-recovered pasa_asmbl_53336.p1, terminal, 160808, 160942
-recovered pasa_asmbl_53336.p1, internal, 160504, 160605
Valid prediction for GlimmerHMM_glimmerT_20617-T1
Valid prediction for GlimmerHMM_glimmerT_20627-T1
Valid prediction for snap_scaffold_8-snap.2275-T1
Valid prediction for GlimmerHMM_glimmerT_20624-T1
Valid prediction for snap_scaffold_8-snap.2308-T1
Valid prediction for HiQ_model.g13766.t1
Valid prediction for pasa_asmbl_53337.p1
Valid prediction for HiQ_model.g13760.t1
Valid prediction for pasa_asmbl_53339.p1
Valid prediction for Augustus_model.g13754.t1
Couldn't classify 134512, 134562
Couldn't classify 137351, 137377
Sorry, prediction pasa_asmbl_53324.p1 fails validation.
(GTG)	 AA	134512-134562	GT	AGG
(GAA)	 AG	134744-134842	GT	TAG
(GAT)	 AG	134944-135042	GT	ACG
(AAG)	 AG	135379-135477	GT	ATG
(CAA)	 AG	136182-136280	GT	ATG
(AGG)	 AG	136553-136651	GT	AGG
(CAA)	 AG	137133-137228	GT	AAG
(GAG)	 AG	137351-137377	GA	GGG
-recovered pasa_asmbl_53324.p1, internal, 134744, 134842
-recovered pasa_asmbl_53324.p1, internal, 134944, 135042
-recovered pasa_asmbl_53324.p1, internal, 135379, 135477
-recovered pasa_asmbl_53324.p1, internal, 136182, 136280
-recovered pasa_asmbl_53324.p1, internal, 136553, 136651
-recovered pasa_asmbl_53324.p1, internal, 137133, 137228

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_20618-T1
Valid prediction for GlimmerHMM_glimmerT_20599-T1
Valid prediction for GlimmerHMM_glimmerT_20625-T1
Valid prediction for snap_scaffold_8-snap.2283-T1
Couldn't classify 49345, 49420
Sorry, prediction pasa_asmbl_52223.p1 fails validation.
(TGG)	 CC	49345-49420	GT	AGG
(ATG)	 AG	49501-49578	GT	TGG
(GAT)	 AG	49668-49741	GT	AGG
(GTG)	 AG	49821-49907	GT	ATG
(AAG)	 AG	49998-50088	GT	GCG
(ATA)	 AG	50262-50336	GT	CTG
(CCT)	 AG	50502-50566	GT	AGG
(GTC)	 AG	50698-50752	GT	TGG
(GGC)	 AG	50857-50903	GT	AGG
(AGT)	 AG	50996-51128	GT	CGG
(GAA)	 AG	51314-51387	GT	TGG
(GTC)	 AG	51494-51595	GT	AGG
(GTG)	 AG	51703-51778	GT	AGG
(GCA)	 AG	51913-52020	GT	AGG
(GTT)	 AG	52117-52196	TT	GAT
-recovered pasa_asmbl_52223.p1, initial, 49501, 49578
-recovered pasa_asmbl_52223.p1, terminal, 52117, 52196
-recovered pasa_asmbl_52223.p1, internal, 49501, 49578
-recovered pasa_asmbl_52223.p1, internal, 49668, 49741
-recovered pasa_asmbl_52223.p1, internal, 49821, 49907
-recovered pasa_asmbl_52223.p1, internal, 49998, 50088
-recovered pasa_asmbl_52223.p1, internal, 50262, 50336
-recovered pasa_asmbl_52223.p1, internal, 50502, 50566
-recovered pasa_asmbl_52223.p1, internal, 50698, 50752
-recovered pasa_asmbl_52223.p1, internal, 50857, 50903
-recovered pasa_asmbl_52223.p1, internal, 50996, 51128
-recovered pasa_asmbl_52223.p1, internal, 51314, 51387
-recovered pasa_asmbl_52223.p1, internal, 51494, 51595
-recovered pasa_asmbl_52223.p1, internal, 51703, 51778
-recovered pasa_asmbl_52223.p1, internal, 51913, 52020
Valid prediction for Augustus_model.g13748.t1
Valid prediction for pasa_asmbl_52226.p1
Valid prediction for Augustus_model.g13765.t1
Valid prediction for snap_scaffold_8-snap.2278-T1
Valid prediction for Augustus_model.g13759.t1
Valid prediction for snap_scaffold_8-snap.2279-T1
Valid prediction for Augustus_model.g13743.t1
Valid prediction for snap_scaffold_8-snap.2304-T1
Valid prediction for snap_scaffold_8-snap.2306-T1
Valid prediction for GlimmerHMM_glimmerT_20620-T1
Valid prediction for snap_scaffold_8-snap.2315-T1
Valid prediction for snap_scaffold_8-snap.2302-T1
Valid prediction for pasa_asmbl_52217.p1
Valid prediction for snap_scaffold_8-snap.2289-T1
Valid prediction for Augustus_model.g13770.t1
Valid prediction for GlimmerHMM_glimmerT_20607-T1
Valid prediction for GlimmerHMM_glimmerT_20604-T1
Valid prediction for Augustus_model.g13746.t1
Valid prediction for snap_scaffold_8-snap.2300-T1
Valid prediction for HiQ_model.g13750.t1
Valid prediction for Augustus_model.g13744.t1
Valid prediction for GlimmerHMM_glimmerT_20621-T1
Valid prediction for GlimmerHMM_glimmerT_20616-T1
Valid prediction for snap_scaffold_8-snap.2284-T1
Valid prediction for GlimmerHMM_glimmerT_20611-T1
Valid prediction for GlimmerHMM_glimmerT_20622-T1
Couldn't classify 25118, 25340
Sorry, prediction pasa_asmbl_52227.p1 fails validation.
(CAC)	 CT	25118-25340	GT	AGG
(GGC)	 AG	25528-25599	GT	TGG
(TTT)	 AG	25705-26045	AG	AGA
-recovered pasa_asmbl_52227.p1, terminal, 25705, 26045
-recovered pasa_asmbl_52227.p1, internal, 25528, 25599
Valid prediction for CodingQuarry_transcript_59858-T1
Couldn't classify 65446, 65560
Sorry, prediction pasa_asmbl_52219.p1 fails validation.
(CGA)	 GC	65446-65560	GT	TAG
(GAT)	 AG	65720-65851	GT	CCG
(CAA)	 AG	66294-66384	GT	AAG
(GAA)	 AG	66501-66924	TG	GAT
-recovered pasa_asmbl_52219.p1, terminal, 66501, 66924
-recovered pasa_asmbl_52219.p1, internal, 65720, 65851
-recovered pasa_asmbl_52219.p1, internal, 66294, 66384
Valid prediction for snap_scaffold_8-snap.2280-T1
Valid prediction for snap_scaffold_8-snap.2305-T1
Valid prediction for snap_scaffold_8-snap.2288-T1
Valid prediction for snap_scaffold_8-snap.2276-T1
Valid prediction for snap_scaffold_8-snap.2310-T1
Valid prediction for Augustus_model.g13764.t1
Valid prediction for GlimmerHMM_glimmerT_20612-T1
Couldn't classify 138911, 139101
Sorry, prediction pasa_asmbl_52216.p1 fails validation.
(AGG)	 CT	138911-139101	GT	AGG
(GTT)	 AG	141302-141438	GT	GGG
(GCA)	 AG	141641-141814	GT	TGG
(GGA)	 AG	141929-142031	GT	AGG
(GAC)	 AG	142142-142338	GT	GAG
(TTC)	 AG	142862-142949	GT	AGG
(CCT)	 AG	143059-143162	GT	AGG
(GTC)	 AG	144096-144225	GT	AAG
(GTG)	 AG	146569-146681	GT	TGG
(CTG)	 AG	148364-148461	AC	GAA
-recovered pasa_asmbl_52216.p1, terminal, 148364, 148461
-recovered pasa_asmbl_52216.p1, internal, 141302, 141438
-recovered pasa_asmbl_52216.p1, internal, 141641, 141814
-recovered pasa_asmbl_52216.p1, internal, 141929, 142031
-recovered pasa_asmbl_52216.p1, internal, 142142, 142338
-recovered pasa_asmbl_52216.p1, internal, 142862, 142949
-recovered pasa_asmbl_52216.p1, internal, 143059, 143162
-recovered pasa_asmbl_52216.p1, internal, 144096, 144225
-recovered pasa_asmbl_52216.p1, internal, 146569, 146681
Valid prediction for CodingQuarry_transcript_59860-T1
Couldn't classify 152071, 152248
Sorry, prediction pasa_asmbl_52212.p1 fails validation.
(TCC)	 CT	152071-152248	GT	AGG
(GTT)	 AG	152490-152637	GT	TGG
(CCG)	 AG	152727-152805	GT	TGG
(GGT)	 AG	152896-152942	GT	AGG
(CCT)	 AG	153052-153154	GT	AGG
(GAA)	 AG	153472-153551	GT	ACG
(GTT)	 AG	153904-153979	GC	AGG
(AAT)	 AG	154094-154187	GT	AGG
(GTG)	 AG	154295-154542	TT	GAT
-recovered pasa_asmbl_52212.p1, terminal, 154295, 154542
-recovered pasa_asmbl_52212.p1, internal, 152490, 152637
-recovered pasa_asmbl_52212.p1, internal, 152727, 152805
-recovered pasa_asmbl_52212.p1, internal, 152896, 152942
-recovered pasa_asmbl_52212.p1, internal, 153052, 153154
-recovered pasa_asmbl_52212.p1, internal, 153472, 153551
-recovered pasa_asmbl_52212.p1, internal, 153904, 153979
-recovered pasa_asmbl_52212.p1, internal, 154094, 154187
Valid prediction for CodingQuarry_transcript_59849-T1
Valid prediction for GlimmerHMM_glimmerT_20609-T1
Valid prediction for CodingQuarry_transcript_59851-T1
Valid prediction for Augustus_model.g13742.t1
Couldn't classify 196254, 196766
Sorry, prediction pasa_asmbl_52210.p1 fails validation.
(CTG)	 CC	196254-196766	AA	ACA
Valid prediction for HiQ_model.g13761.t1
Valid prediction for snap_scaffold_8-snap.2277-T1
Valid prediction for snap_scaffold_8-snap.2290-T1
Couldn't classify 20305, 20364
Couldn't classify 24560, 24583
Sorry, prediction pasa_asmbl_52228.p1 fails validation.
(CTG)	 TT	20305-20364	GT	TGG
(AAG)	 AG	22042-22165	GT	AGG
(CCG)	 AG	23475-23561	GT	AGG
(CCC)	 AG	24142-24305	GT	TGG
(GTG)	 AG	24560-24583	GG	CAG
add_exon() Sorry, pasa_asmbl_52228.p1 23475-23561-terminal-1 is invalid.
-recovered pasa_asmbl_52228.p1, terminal, 23475, 23561
-recovered pasa_asmbl_52228.p1, internal, 22042, 22165
-recovered pasa_asmbl_52228.p1, internal, 23475, 23561
-recovered pasa_asmbl_52228.p1, internal, 24142, 24305
Valid prediction for GlimmerHMM_glimmerT_20628-T1
Valid prediction for CodingQuarry_transcript_59857-T1
Valid prediction for snap_scaffold_8-snap.2282-T1
Valid prediction for HiQ_model.g13763.t1
Valid prediction for GlimmerHMM_glimmerT_20629-T1
Valid prediction for snap_scaffold_8-snap.2307-T1
Valid prediction for GlimmerHMM_glimmerT_20608-T1
Valid prediction for snap_scaffold_8-snap.2292-T1
Valid prediction for CodingQuarry_transcript_59859-T1
Valid prediction for snap_scaffold_8-snap.2296-T1
Valid prediction for pasa_asmbl_52220.p1
Valid prediction for HiQ_model.g13755.t1
Valid prediction for snap_scaffold_8-snap.2312-T1
Valid prediction for snap_scaffold_8-snap.2313-T1
Valid prediction for pasa_asmbl_52211.p1
Valid prediction for HiQ_model.g13749.t1
Valid prediction for HiQ_model.g13768.t1
Valid prediction for snap_scaffold_8-snap.2291-T1
Valid prediction for snap_scaffold_8-snap.2285-T1
Valid prediction for Augustus_model.g13751.t1
Valid prediction for CodingQuarry_transcript_59863-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 29299, rend_intergenic: 2265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43178, rend_intergenic: 42083  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75078, rend_intergenic: 63605  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206643, rend_intergenic: 201187  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220266, rend_intergenic: 210941  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 235301
-exon list size: 547


building trellis

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43.2    
43.4    
43.5    
43.7    
43.9    
44.1    
44.3    
44.4    
44.6    
44.8    
45.0    
45.2    
45.4    
45.5    
45.7    
45.9    
46.1    
46.3    
46.4    
46.6    
46.8    
47.0    
47.2    
47.4    
47.5    
47.7    
47.9    
48.1    
48.3    
48.5    
48.6    
48.8    
49.0    
49.2    
49.4    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.6    
50.8    
51.0    
51.2    
51.4    
51.5    
51.7    
51.9    
52.1    
52.3    
52.5    
52.6    
52.8    
53.0    
53.2    
53.4    
53.6    
53.7    
53.9    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.2    
55.4    
55.6    
55.7    
55.9    
56.1    
56.3    
56.5    
56.6    
56.8    
57.0    
57.2    
57.4    
57.6    
57.7    
57.9    
58.1    
58.3    
58.5    
58.7    
58.8    
59.0    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.8    
61.0    
61.2    
61.4    
61.6    
61.7    
61.9    
62.1    
62.3    
62.5    
62.7    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
63.9    
64.1    
64.3    
64.5    
64.7    
64.8    
65.0    
65.2    
65.4    
65.6    
65.8    
65.9    
66.1    
66.3    
66.5    
66.7    
66.8    
67.0    
67.2    
67.4    
67.6    
67.8    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.6    
69.8    
69.9    
70.1    
70.3    
70.5    
70.7    
70.9    
71.0    
71.2    
71.4    
71.6    
71.8    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.0    
73.2    
73.4    
73.6    
73.8    
74.0    
74.1    
74.3    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.6    
75.8    
76.0    
76.1    
76.3    
76.5    
76.7    
76.9    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.1    
78.3    
78.5    
78.7    
78.9    
79.1    
79.2    
79.4    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.8    
82.0    
82.1    
82.3    
82.5    
82.7    
82.9    
83.1    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.3    
84.5    
84.7    
84.9    
85.1    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.3    
86.5    
86.7    
86.9    
87.1    
87.2    
87.4    
87.6    
87.8    
88.0    
88.2    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.4    
89.6    
89.8    
90.0    
90.2    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.4    
91.6    
91.8    
92.0    
92.2    
92.3    
92.5    
92.7    
92.9    
93.1    
93.3    
93.4    
93.6    
93.8    
94.0    
94.2    
94.4    
94.5    
94.7    
94.9    
95.1    
95.3    
95.4    
95.6    
95.8    
96.0    
96.2    
96.4    
96.5    
96.7    
96.9    
97.1    
97.3    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.5    
98.7    
98.9    
99.1    
99.3    
99.5    
99.6    
99.8    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 29299, rend_intergenic: 2265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43178, rend_intergenic: 42083  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75078, rend_intergenic: 63605  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206643, rend_intergenic: 201187  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220266, rend_intergenic: 210941  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 216521 - 235301
-exon list size: 8


building trellis

10.0    
20.0    
30.0    
40.0    
50.0    
60.0    
70.0    
80.0    
90.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 216521 - 226787
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support