-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_789

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2155, 2506
Couldn't classify 3098, 3572
Sorry, prediction snap_scaffold_789-snap.2-T1 fails validation.
(GAG)	 AG	2155-2506	GT	GGG
(GTG)	 AG	3098-3572	GT	GGG
-recovered snap_scaffold_789-snap.2-T1, internal, 2155, 2506
-recovered snap_scaffold_789-snap.2-T1, internal, 3098, 3572

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1492, 1596
Couldn't classify 2534, 2635
Sorry, prediction snap_scaffold_789-snap.1-T1 fails validation.
(CTC)	 AG	1492-1596	GT	AGG
(GGT)	 AG	2534-2635	GT	TCG
-recovered snap_scaffold_789-snap.1-T1, internal, 1492, 1596
-recovered snap_scaffold_789-snap.1-T1, internal, 2534, 2635

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 2956, rend_intergenic: 2155  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 4447
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 2956, rend_intergenic: 2155  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support