-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_786

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2667, 2769
Sorry, prediction GlimmerHMM_glimmerT_60734-T1 fails validation.
(ATG)	 CC	764-801	GT	AAG
(AGG)	 AG	2667-2769	GT	CTG
-recovered GlimmerHMM_glimmerT_60734-T1, initial, 764, 801
-recovered GlimmerHMM_glimmerT_60734-T1, internal, 2667, 2769
Couldn't classify 685, 801
Sorry, prediction snap_scaffold_786-snap.2-T1 fails validation.
(GCA)	 AG	685-801	GT	AAG
(AGG)	 AG	2667-2769	GT	CTG
(TTG)	 AG	3416-3457	GT	ATG
(GTG)	 AG	4055-4468	GG	GAG
-recovered snap_scaffold_786-snap.2-T1, terminal, 4055, 4468
-recovered snap_scaffold_786-snap.2-T1, internal, 685, 801
-recovered snap_scaffold_786-snap.2-T1, internal, 2667, 2769
-recovered snap_scaffold_786-snap.2-T1, internal, 3416, 3457

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_786-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4473
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support