-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_774

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_774-snap.1-T1
add_exon() Sorry, snap_scaffold_774-snap.1-T1 122-312-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 372, 507
Sorry, prediction GlimmerHMM_glimmerT_60720-T1 fails validation.
(ATA)	 AG	372-507	GT	GGG
(GCC)	 AG	4121-4280	GT	ACG
(GTT)	 AG	4315-4474	AC	GAA
-recovered GlimmerHMM_glimmerT_60720-T1, terminal, 4315, 4474
-recovered GlimmerHMM_glimmerT_60720-T1, internal, 372, 507
-recovered GlimmerHMM_glimmerT_60720-T1, internal, 4121, 4280
Couldn't classify 4121, 4314
Sorry, prediction Augustus_model.g40194.t1 fails validation.
(ATG)	 AC	3956-3977	GT	AGG
(GCC)	 AG	4121-4314	GT	AGG
-recovered Augustus_model.g40194.t1, initial, 3956, 3977
-recovered Augustus_model.g40194.t1, internal, 4121, 4314

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4539
-exon list size: 8


building trellis

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-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support