-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_771

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_60716-T1
add_exon() Sorry, GlimmerHMM_glimmerT_60716-T1 1215-1426-terminal-1 is invalid.
Couldn't classify 387, 464
Sorry, prediction Augustus_model.g40192.t1 fails validation.
(GGC)	 AG	387-464	GT	AGG
(CAA)	 AG	1215-1426	TC	GAT
-recovered Augustus_model.g40192.t1, terminal, 1215, 1426
-recovered Augustus_model.g40192.t1, internal, 387, 464
Valid prediction for snap_scaffold_771-snap.1-T1
add_exon() Sorry, snap_scaffold_771-snap.1-T1 1215-1426-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_771-snap.2-T1
Valid prediction for GlimmerHMM_glimmerT_60717-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4563
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 2 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 2 predictions persist after filtering for low support