-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_751

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60696-T1
add_exon() Sorry, GlimmerHMM_glimmerT_60696-T1 100-305-terminal-1 is invalid.
Couldn't classify 4528, 4562
Sorry, prediction snap_scaffold_751-snap.1-T1 fails validation.
(ATG)	 CC	365-403	GT	AGG
(AGC)	 AG	809-932	GT	AAG
(ACG)	 AG	4528-4562	GT	AAG
-recovered snap_scaffold_751-snap.1-T1, initial, 365, 403
-recovered snap_scaffold_751-snap.1-T1, internal, 809, 932
-recovered snap_scaffold_751-snap.1-T1, internal, 4528, 4562
Valid prediction for snap_scaffold_751-snap.2-T1
add_exon() Sorry, snap_scaffold_751-snap.2-T1 100-305-terminal-1 is invalid.
Valid prediction for Augustus_model.g40180.t1
add_exon() Sorry, Augustus_model.g40180.t1 100-305-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4675
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support