-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_711

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 197, 345
Sorry, prediction Augustus_model.g40144.t1 fails validation.
(TCT)	 AG	197-345	GT	AGG
(CAC)	 AG	941-1035	GC	AGG
-recovered Augustus_model.g40144.t1, terminal, 941, 1035
-recovered Augustus_model.g40144.t1, internal, 197, 345
-recovered Augustus_model.g40144.t1, internal, 941, 1035

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_711-snap.1-T1
Valid prediction for GlimmerHMM_glimmerT_60648-T1
Valid prediction for GlimmerHMM_glimmerT_60649-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4884
-exon list size: 8


building trellis

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-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support