-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_702

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60637-T1
Valid prediction for snap_scaffold_702-snap.2-T1
Couldn't classify 3954, 4083
Sorry, prediction snap_scaffold_702-snap.1-T1 fails validation.
(ATG)	 AG	3075-3448	GT	GAG
(CGG)	 AG	3954-4083	GT	AGG
-recovered snap_scaffold_702-snap.1-T1, initial, 3075, 3448
-recovered snap_scaffold_702-snap.1-T1, internal, 3075, 3448
-recovered snap_scaffold_702-snap.1-T1, internal, 3954, 4083

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 4935
-exon list size: 8


building trellis

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-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 2 predictions persist after filtering for low support