-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_7/scaffold_7_9748123-9995234 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_17927-T1 Couldn't classify 49512, 49590 Sorry, prediction pasa_asmbl_50096.p1 fails validation. (GCC) CA 49512-49590 GT AGG (TGG) AG 49833-49962 GT ATG (TGT) AG 50147-50227 GT AGG (GGT) AG 50588-50699 GA GAG -recovered pasa_asmbl_50096.p1, terminal, 50588, 50699 -recovered pasa_asmbl_50096.p1, internal, 49833, 49962 -recovered pasa_asmbl_50096.p1, internal, 50147, 50227 Valid prediction for Augustus_model.g12058.t1 Valid prediction for snap_scaffold_7-snap.1898-T1 Valid prediction for Augustus_model.g12060.t1 Valid prediction for HiQ_model.g12044.t1 Valid prediction for Augustus_model.g12057.t1 Valid prediction for GlimmerHMM_glimmerT_17957-T1 Valid prediction for GlimmerHMM_glimmerT_17930-T1 Valid prediction for GlimmerHMM_glimmerT_17933-T1 Valid prediction for GlimmerHMM_glimmerT_17961-T1 Valid prediction for snap_scaffold_7-snap.1885-T1 Valid prediction for HiQ_model.g12053.t1 Valid prediction for GlimmerHMM_glimmerT_17937-T1 Valid prediction for snap_scaffold_7-snap.1912-T1 Valid prediction for GlimmerHMM_glimmerT_17956-T1 Valid prediction for CodingQuarry_transcript_57607-T1 Valid prediction for pasa_asmbl_50097.p1 Valid prediction for snap_scaffold_7-snap.1889-T1 Valid prediction for snap_scaffold_7-snap.1893-T1 Valid prediction for snap_scaffold_7-snap.1919-T1 Valid prediction for snap_scaffold_7-snap.1926-T1 Valid prediction for snap_scaffold_7-snap.1915-T1 Valid prediction for HiQ_model.g12055.t1 Valid prediction for GlimmerHMM_glimmerT_17939-T1 Valid prediction for Augustus_model.g12062.t1 Valid prediction for GlimmerHMM_glimmerT_17940-T1 Valid prediction for CodingQuarry_transcript_57602-T1 Valid prediction for GlimmerHMM_glimmerT_17945-T1 Valid prediction for GlimmerHMM_glimmerT_17923-T1 Couldn't classify 177409, 177592 Sorry, prediction pasa_asmbl_50102.p1 fails validation. (GCA) TC 177409-177592 GT ATG (ATG) AG 177720-177859 GT GTG (GTT) AG 178186-178296 GT GTG (GAC) AG 178424-178447 AC GAA add_exon() Sorry, pasa_asmbl_50102.p1 177720-177859-initial-1 is invalid. -recovered pasa_asmbl_50102.p1, initial, 177720, 177859 -recovered pasa_asmbl_50102.p1, terminal, 178424, 178447 -recovered pasa_asmbl_50102.p1, internal, 177720, 177859 -recovered pasa_asmbl_50102.p1, internal, 178186, 178296 Valid prediction for GlimmerHMM_glimmerT_17946-T1 Valid prediction for Augustus_model.g12040.t1 Valid prediction for GlimmerHMM_glimmerT_17925-T1 Valid prediction for snap_scaffold_7-snap.1886-T1 Valid prediction for Augustus_model.g12036.t1 Valid prediction for Augustus_model.g12052.t1 Valid prediction for snap_scaffold_7-snap.1895-T1 Valid prediction for pasa_asmbl_50098.p1 Valid prediction for CodingQuarry_transcript_57604-T1 Valid prediction for GlimmerHMM_glimmerT_17954-T1 Valid prediction for pasa_asmbl_50100.p1 Valid prediction for HiQ_model.g12046.t1 Valid prediction for snap_scaffold_7-snap.1891-T1 Valid prediction for snap_scaffold_7-snap.1923-T1 Valid prediction for snap_scaffold_7-snap.1921-T1 Valid prediction for CodingQuarry_transcript_57601-T1 Valid prediction for snap_scaffold_7-snap.1894-T1 Valid prediction for GlimmerHMM_glimmerT_17951-T1 Valid prediction for snap_scaffold_7-snap.1900-T1 Valid prediction for snap_scaffold_7-snap.1913-T1 Valid prediction for GlimmerHMM_glimmerT_17952-T1 Valid prediction for snap_scaffold_7-snap.1920-T1 Valid prediction for snap_scaffold_7-snap.1927-T1 Valid prediction for Augustus_model.g12059.t1 Valid prediction for snap_scaffold_7-snap.1909-T1 Valid prediction for Augustus_model.g12043.t1 Valid prediction for snap_scaffold_7-snap.1918-T1 Valid prediction for snap_scaffold_7-snap.1928-T1 Valid prediction for GlimmerHMM_glimmerT_17959-T1 Valid prediction for GlimmerHMM_glimmerT_17935-T1 Valid prediction for CodingQuarry_transcript_57609-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_17947-T1 Valid prediction for HiQ_model.g12051.t1 Valid prediction for snap_scaffold_7-snap.1905-T1 Couldn't classify 127243, 127343 Couldn't classify 129013, 129164 Sorry, prediction pasa_asmbl_51096.p1 fails validation. (CTG) TG 127243-127343 GT GGG (GTG) AG 127546-127742 GT AGG (AGT) AG 127841-128078 GT AGG (GAT) AG 128181-128286 GT AGG (GTG) AG 128384-128611 GT AGG (ATG) AG 128766-128856 GT AGG (GGT) AG 129013-129164 CA TGC -recovered pasa_asmbl_51096.p1, initial, 128766, 128856 -recovered pasa_asmbl_51096.p1, internal, 127546, 127742 -recovered pasa_asmbl_51096.p1, internal, 127841, 128078 -recovered pasa_asmbl_51096.p1, internal, 128181, 128286 -recovered pasa_asmbl_51096.p1, internal, 128384, 128611 -recovered pasa_asmbl_51096.p1, internal, 128766, 128856 Valid prediction for GlimmerHMM_glimmerT_17941-T1 Valid prediction for Augustus_model.g12049.t1 Valid prediction for snap_scaffold_7-snap.1924-T1 Valid prediction for GlimmerHMM_glimmerT_17949-T1 Valid prediction for snap_scaffold_7-snap.1917-T1 Valid prediction for Augustus_model.g12047.t1 Valid prediction for snap_scaffold_7-snap.1902-T1 Valid prediction for Augustus_model.g12048.t1 Valid prediction for GlimmerHMM_glimmerT_17924-T1 Valid prediction for pasa_asmbl_51098.p1 Valid prediction for GlimmerHMM_glimmerT_17926-T1 Valid prediction for snap_scaffold_7-snap.1901-T1 Valid prediction for HiQ_model.g12041.t1 Valid prediction for snap_scaffold_7-snap.1887-T1 Valid prediction for HiQ_model.g12039.t1 Valid prediction for snap_scaffold_7-snap.1892-T1 Couldn't classify 129422, 129529 Sorry, prediction pasa_asmbl_51091.p1 fails validation. (AGG) CC 129422-129529 GT CAG (GTC) AG 129616-129711 GC AGG (GGT) AG 129844-130019 GT AAG (ACT) AG 130159-130292 GT CCG (GAA) AG 130408-130593 GT CAG (AAG) AG 130910-130939 GT GAG (ATG) AG 131236-131372 GT AGG (GTA) AG 131627-131809 GT ATG (GTG) AG 131980-132137 GT AGG (GTA) AG 132244-132445 GT AGG (ATG) AG 132623-132794 GT CAG (GTC) AG 132909-133054 GT AGG (GAT) AG 133153-133282 GT GGG (GTG) AG 133438-133637 GT AAG (GTG) AG 133773-134054 CC GAC add_exon() Sorry, pasa_asmbl_51091.p1 131236-131372-initial-1 is invalid. -recovered pasa_asmbl_51091.p1, initial, 131236, 131372 -recovered pasa_asmbl_51091.p1, initial, 132623, 132794 -recovered pasa_asmbl_51091.p1, terminal, 133773, 134054 -recovered pasa_asmbl_51091.p1, internal, 129616, 129711 -recovered pasa_asmbl_51091.p1, internal, 129844, 130019 -recovered pasa_asmbl_51091.p1, internal, 130159, 130292 -recovered pasa_asmbl_51091.p1, internal, 130408, 130593 -recovered pasa_asmbl_51091.p1, internal, 130910, 130939 -recovered pasa_asmbl_51091.p1, internal, 131236, 131372 -recovered pasa_asmbl_51091.p1, internal, 131627, 131809 -recovered pasa_asmbl_51091.p1, internal, 131980, 132137 -recovered pasa_asmbl_51091.p1, internal, 132244, 132445 -recovered pasa_asmbl_51091.p1, internal, 132623, 132794 -recovered pasa_asmbl_51091.p1, internal, 132909, 133054 -recovered pasa_asmbl_51091.p1, internal, 133153, 133282 -recovered pasa_asmbl_51091.p1, internal, 133438, 133637 Valid prediction for GlimmerHMM_glimmerT_17955-T1 Couldn't classify 26556, 26785 Couldn't classify 27696, 27772 Sorry, prediction pasa_asmbl_51559.p1 fails validation. (CTC) TC 26556-26785 GT AGG (GTT) AG 27141-27232 GT AGG (ACC) AG 27696-27772 AG AGA -recovered pasa_asmbl_51559.p1, internal, 27141, 27232 Valid prediction for snap_scaffold_7-snap.1908-T1 Valid prediction for GlimmerHMM_glimmerT_17934-T1 Valid prediction for Augustus_model.g12050.t1 Valid prediction for snap_scaffold_7-snap.1899-T1 Couldn't classify 189585, 190025 Sorry, prediction pasa_asmbl_51071.p1 fails validation. (ACA) GG 189585-190025 CC GAC Valid prediction for snap_scaffold_7-snap.1897-T1 Valid prediction for snap_scaffold_7-snap.1922-T1 Couldn't classify 155763, 155934 Couldn't classify 156270, 156329 Sorry, prediction pasa_asmbl_51083.p1 fails validation. (CCT) CC 155763-155934 GT AGG (GGA) AG 156079-156164 GT AGG (GTG) AG 156270-156329 TA AGT -recovered pasa_asmbl_51083.p1, internal, 156079, 156164 Valid prediction for snap_scaffold_7-snap.1911-T1 Valid prediction for CodingQuarry_transcript_57598-T1 Valid prediction for GlimmerHMM_glimmerT_17958-T1 Valid prediction for HiQ_model.g12038.t1 Valid prediction for snap_scaffold_7-snap.1884-T1 Valid prediction for pasa_asmbl_51078.p1 Valid prediction for CodingQuarry_transcript_57605-T1 Valid prediction for GlimmerHMM_glimmerT_17942-T1 Couldn't classify 144725, 145109 Sorry, prediction pasa_asmbl_51089.p1 fails validation. (ATG) GC 144435-144455 GT AGG (AAG) AG 144562-144611 GT AAG (CAA) AG 144725-145109 AG GCA -recovered pasa_asmbl_51089.p1, initial, 144435, 144455 -recovered pasa_asmbl_51089.p1, terminal, 144562, 144611 -recovered pasa_asmbl_51089.p1, internal, 144562, 144611 Couldn't classify 204486, 204607 Sorry, prediction pasa_asmbl_51069.p1 fails validation. (GAA) AG 204486-204607 GT AGG (GAA) AG 205140-205225 GT CGG (CGG) AG 205876-206069 GT AGG (ACA) AG 206597-206698 GT GGG (GTG) AG 206809-206860 GT AGG (AGC) AG 207063-207184 GT ATG (GTT) AG 207482-207579 GT AAG (GTA) AG 207715-207784 GG GAG -recovered pasa_asmbl_51069.p1, terminal, 207715, 207784 -recovered pasa_asmbl_51069.p1, internal, 204486, 204607 -recovered pasa_asmbl_51069.p1, internal, 205140, 205225 -recovered pasa_asmbl_51069.p1, internal, 205876, 206069 -recovered pasa_asmbl_51069.p1, internal, 206597, 206698 -recovered pasa_asmbl_51069.p1, internal, 206809, 206860 -recovered pasa_asmbl_51069.p1, internal, 207063, 207184 -recovered pasa_asmbl_51069.p1, internal, 207482, 207579 Valid prediction for snap_scaffold_7-snap.1903-T1 Valid prediction for GlimmerHMM_glimmerT_17929-T1 Valid prediction for snap_scaffold_7-snap.1910-T1 Valid prediction for GlimmerHMM_glimmerT_17932-T1 Valid prediction for GlimmerHMM_glimmerT_17928-T1 Valid prediction for GlimmerHMM_glimmerT_17936-T1 Valid prediction for snap_scaffold_7-snap.1925-T1 Valid prediction for Augustus_model.g12061.t1 Valid prediction for snap_scaffold_7-snap.1896-T1 Couldn't classify 156792, 156872 Sorry, prediction pasa_asmbl_51079.p1 fails validation. (AGG) GC 156792-156872 GT AGG (ATG) AG 158036-158221 GT AGG (ACA) AG 158481-158574 GT AGG (GGT) AG 158978-159096 GT AGG (AAT) AG 159225-161321 AA GAA -recovered pasa_asmbl_51079.p1, initial, 158036, 158221 -recovered pasa_asmbl_51079.p1, terminal, 159225, 161321 -recovered pasa_asmbl_51079.p1, internal, 158036, 158221 -recovered pasa_asmbl_51079.p1, internal, 158481, 158574 -recovered pasa_asmbl_51079.p1, internal, 158978, 159096 Couldn't classify 147244, 147612 Sorry, prediction pasa_asmbl_51085.p1 fails validation. (TAT) AT 147244-147612 GT GGG (CTG) AG 147780-147900 GT AGG (GCA) AG 150389-150999 AG AAA -recovered pasa_asmbl_51085.p1, terminal, 150389, 150999 -recovered pasa_asmbl_51085.p1, internal, 147780, 147900 Valid prediction for HiQ_model.g12056.t1 Valid prediction for CodingQuarry_transcript_57608-T1 Valid prediction for pasa_asmbl_51095.p1 Valid prediction for GlimmerHMM_glimmerT_17950-T1 Valid prediction for snap_scaffold_7-snap.1906-T1 Valid prediction for HiQ_model.g12037.t1 Couldn't classify 215267, 215333 Couldn't classify 215409, 215511 Sorry, prediction CodingQuarry_transcript_57599-T1 fails validation. (ATG) CA 214975-215077 GT AGG (GAA) AG 215267-215333 AT ATA (CCC) AT 215409-215511 GT AGG (AAT) AG 215604-215690 GT AGG (TTG) AG 215777-215833 GT AGG (GGT) AG 216193-216283 GT AGG (GTA) AG 216383-216444 GT AGG (GTG) AG 216531-216627 GT TGG (GGA) AG 216847-216928 GT GGG (GTA) AG 217016-217128 GT TGG (GTA) AG 217277-217374 GC GAG -recovered CodingQuarry_transcript_57599-T1, initial, 214975, 215077 -recovered CodingQuarry_transcript_57599-T1, terminal, 217277, 217374 -recovered CodingQuarry_transcript_57599-T1, internal, 215604, 215690 -recovered CodingQuarry_transcript_57599-T1, internal, 215777, 215833 -recovered CodingQuarry_transcript_57599-T1, internal, 216193, 216283 -recovered CodingQuarry_transcript_57599-T1, internal, 216383, 216444 -recovered CodingQuarry_transcript_57599-T1, internal, 216531, 216627 -recovered CodingQuarry_transcript_57599-T1, internal, 216847, 216928 -recovered CodingQuarry_transcript_57599-T1, internal, 217016, 217128 -recovered CodingQuarry_transcript_57599-T1, internal, 217277, 217374 Valid prediction for snap_scaffold_7-snap.1888-T1 Valid prediction for snap_scaffold_7-snap.1904-T1 Sorry, intron length (6) is less than minimum required (10) Couldn't classify 172778, 172978 Couldn't classify 175735, 175762 Sorry, prediction pasa_asmbl_51579.p1 fails validation. (GAT) CA 172778-172978 GT TGG (TTC) AG 174370-174480 GT AGG (CTG) AG 174592-174684 GT CTG (CTG) AG 175419-175549 GT AGG (GTT) AG 175735-175762 GG ACG -recovered pasa_asmbl_51579.p1, internal, 174370, 174480 -recovered pasa_asmbl_51579.p1, internal, 174592, 174684 -recovered pasa_asmbl_51579.p1, internal, 175419, 175549 Couldn't classify 142911, 142922 Couldn't classify 143761, 143811 Sorry, prediction pasa_asmbl_51090.p1 fails validation. (ACT) TC 142911-142922 GT CAG (GTT) AG 143050-143196 GT AGG (TGG) AG 143427-143546 GT CGG (GCA) AG 143761-143811 GA GTG -recovered pasa_asmbl_51090.p1, internal, 143050, 143196 -recovered pasa_asmbl_51090.p1, internal, 143427, 143546 Valid prediction for snap_scaffold_7-snap.1914-T1 Valid prediction for GlimmerHMM_glimmerT_17953-T1 Valid prediction for GlimmerHMM_glimmerT_17938-T1 Valid prediction for CodingQuarry_transcript_57597-T1 Couldn't classify 122255, 122396 Couldn't classify 123897, 124040 Sorry, prediction pasa_asmbl_51533.p1 fails validation. (TAC) CC 122255-122396 GT AGG (GGA) AG 123594-123748 GT AGG (ATC) AG 123897-124040 GA CAG -recovered pasa_asmbl_51533.p1, internal, 123594, 123748 Valid prediction for GlimmerHMM_glimmerT_17960-T1 Valid prediction for pasa_asmbl_51552.p1 Couldn't classify 124473, 124487 Couldn't classify 126461, 126624 Sorry, prediction pasa_asmbl_51097.p1 fails validation. (TCT) GA 124473-124487 GT AGG (GTG) AG 124904-125045 GT AGG (TGA) AG 125458-125648 GC AGG (ATA) AG 125944-126358 GT AGG (TGT) AG 126461-126624 CT GCC -recovered pasa_asmbl_51097.p1, internal, 124904, 125045 -recovered pasa_asmbl_51097.p1, internal, 125458, 125648 -recovered pasa_asmbl_51097.p1, internal, 125944, 126358 Valid prediction for GlimmerHMM_glimmerT_17931-T1 Valid prediction for GlimmerHMM_glimmerT_17944-T1 Valid prediction for HiQ_model.g12054.t1 Couldn't classify 145810, 146316 Sorry, prediction pasa_asmbl_51088.p1 fails validation. (GCT) CT 145810-146316 GT ACG Valid prediction for pasa_asmbl_51063.p1 Valid prediction for snap_scaffold_7-snap.1907-T1 Valid prediction for GlimmerHMM_glimmerT_17943-T1 Valid prediction for snap_scaffold_7-snap.1916-T1 Valid prediction for snap_scaffold_7-snap.1890-T1 Couldn't classify 208765, 208984 Sorry, prediction pasa_asmbl_51068.p1 fails validation. (CAT) CC 208765-208984 GT GGG (GTA) AG 209327-209503 GT AGG (GGT) AG 209737-209864 GT AGG (GTG) AG 209967-210154 GT AGG (AGG) AG 210281-210471 GT AGG (GGT) AG 210639-210808 GT AGG (GTG) AG 210932-211017 GT AGG (GTA) AG 211161-211273 GT AGG (GGA) AG 211471-211625 GT AGG (CCC) AG 211818-211970 AG GAA add_exon() Sorry, pasa_asmbl_51068.p1 210281-210471-terminal-2 is invalid. -recovered pasa_asmbl_51068.p1, terminal, 210281, 210471 -recovered pasa_asmbl_51068.p1, terminal, 211818, 211970 -recovered pasa_asmbl_51068.p1, internal, 209327, 209503 -recovered pasa_asmbl_51068.p1, internal, 209737, 209864 -recovered pasa_asmbl_51068.p1, internal, 209967, 210154 -recovered pasa_asmbl_51068.p1, internal, 210281, 210471 -recovered pasa_asmbl_51068.p1, internal, 210639, 210808 -recovered pasa_asmbl_51068.p1, internal, 210932, 211017 -recovered pasa_asmbl_51068.p1, internal, 211161, 211273 -recovered pasa_asmbl_51068.p1, internal, 211471, 211625 Valid prediction for GlimmerHMM_glimmerT_17948-T1 Valid prediction for Augustus_model.g12045.t1 Valid prediction for CodingQuarry_transcript_57606-T1 Valid prediction for pasa_asmbl_51101.p1 Couldn't classify 146434, 147147 Sorry, prediction pasa_asmbl_51087.p1 fails validation. (ATG) GC 146434-147147 CC TAC Valid prediction for Augustus_model.g12042.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 12059, rend_intergenic: 5325 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48809, rend_intergenic: 39914 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59457, rend_intergenic: 57088 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75880, rend_intergenic: 73323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 78931, rend_intergenic: 76106 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 216648, rend_intergenic: 212033 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222103, rend_intergenic: 218501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 108914, rend_intergenic: 108911 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 247112 -exon list size: 485 building trellis 0.2 0.4 0.6 0.8 1.0 1.2 1.4 1.6 1.8 2.1 2.3 2.5 2.7 2.9 3.1 3.3 3.5 3.7 3.9 4.1 4.3 4.5 4.7 4.9 5.1 5.3 5.5 5.7 6.0 6.2 6.4 6.6 6.8 7.0 7.2 7.4 7.6 7.8 8.0 8.2 8.4 8.6 8.8 9.0 9.2 9.4 9.7 9.9 10.1 10.3 10.5 10.7 10.9 11.1 11.3 11.5 11.7 11.9 12.1 12.3 12.5 12.7 12.9 13.1 13.3 13.6 13.8 14.0 14.2 14.4 14.6 14.8 15.0 15.2 15.4 15.6 15.8 16.0 16.2 16.4 16.6 16.8 17.0 17.2 17.5 17.7 17.9 18.1 18.3 18.5 18.7 18.9 19.1 19.3 19.5 19.7 19.9 20.1 20.3 20.5 20.7 20.9 21.1 21.4 21.6 21.8 22.0 22.2 22.4 22.6 22.8 23.0 23.2 23.4 23.6 23.8 24.0 24.2 24.4 24.6 24.8 25.1 25.3 25.5 25.7 25.9 26.1 26.3 26.5 26.7 26.9 27.1 27.3 27.5 27.7 27.9 28.1 28.3 28.5 28.7 29.0 29.2 29.4 29.6 29.8 30.0 30.2 30.4 30.6 30.8 31.0 31.2 31.4 31.6 31.8 32.0 32.2 32.4 32.6 32.9 33.1 33.3 33.5 33.7 33.9 34.1 34.3 34.5 34.7 34.9 35.1 35.3 35.5 35.7 35.9 36.1 36.3 36.6 36.8 37.0 37.2 37.4 37.6 37.8 38.0 38.2 38.4 38.6 38.8 39.0 39.2 39.4 39.6 39.8 40.0 40.2 40.5 40.7 40.9 41.1 41.3 41.5 41.7 41.9 42.1 42.3 42.5 42.7 42.9 43.1 43.3 43.5 43.7 43.9 44.1 44.4 44.6 44.8 45.0 45.2 45.4 45.6 45.8 46.0 46.2 46.4 46.6 46.8 47.0 47.2 47.4 47.6 47.8 48.0 48.3 48.5 48.7 48.9 49.1 49.3 49.5 49.7 49.9 50.1 50.3 50.5 50.7 50.9 51.1 51.3 51.5 51.7 52.0 52.2 52.4 52.6 52.8 53.0 53.2 53.4 53.6 53.8 54.0 54.2 54.4 54.6 54.8 55.0 55.2 55.4 55.6 55.9 56.1 56.3 56.5 56.7 56.9 57.1 57.3 57.5 57.7 57.9 58.1 58.3 58.5 58.7 58.9 59.1 59.3 59.5 59.8 60.0 60.2 60.4 60.6 60.8 61.0 61.2 61.4 61.6 61.8 62.0 62.2 62.4 62.6 62.8 63.0 63.2 63.4 63.7 63.9 64.1 64.3 64.5 64.7 64.9 65.1 65.3 65.5 65.7 65.9 66.1 66.3 66.5 66.7 66.9 67.1 67.4 67.6 67.8 68.0 68.2 68.4 68.6 68.8 69.0 69.2 69.4 69.6 69.8 70.0 70.2 70.4 70.6 70.8 71.0 71.3 71.5 71.7 71.9 72.1 72.3 72.5 72.7 72.9 73.1 73.3 73.5 73.7 73.9 74.1 74.3 74.5 74.7 74.9 75.2 75.4 75.6 75.8 76.0 76.2 76.4 76.6 76.8 77.0 77.2 77.4 77.6 77.8 78.0 78.2 78.4 78.6 78.9 79.1 79.3 79.5 79.7 79.9 80.1 80.3 80.5 80.7 80.9 81.1 81.3 81.5 81.7 81.9 82.1 82.3 82.5 82.8 83.0 83.2 83.4 83.6 83.8 84.0 84.2 84.4 84.6 84.8 85.0 85.2 85.4 85.6 85.8 86.0 86.2 86.4 86.7 86.9 87.1 87.3 87.5 87.7 87.9 88.1 88.3 88.5 88.7 88.9 89.1 89.3 89.5 89.7 89.9 90.1 90.3 90.6 90.8 91.0 91.2 91.4 91.6 91.8 92.0 92.2 92.4 92.6 92.8 93.0 93.2 93.4 93.6 93.8 94.0 94.3 94.5 94.7 94.9 95.1 95.3 95.5 95.7 95.9 96.1 96.3 96.5 96.7 96.9 97.1 97.3 97.5 97.7 97.9 98.2 98.4 98.6 98.8 99.0 99.2 99.4 99.6 99.8 -found 37 predictions from path traversal Error with prediction: snap lend_intergenic: 12059, rend_intergenic: 5325 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48809, rend_intergenic: 39914 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59457, rend_intergenic: 57088 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75880, rend_intergenic: 73323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 78931, rend_intergenic: 76106 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 216648, rend_intergenic: 212033 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222103, rend_intergenic: 218501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 108914, rend_intergenic: 108911 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 33 predictions persist after filtering for low support