-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_7/scaffold_7_2558333-2753097

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 24380, 24412
Sorry, prediction pasa_asmbl_49656.p1 fails validation.
(CAG)	 GT	24380-24412	GT	AGG
(GTG)	 AG	24633-24696	GT	AGG
(AGG)	 AG	26971-27141	GT	CGG
(ACG)	 AG	27400-27504	GT	AGG
(AGT)	 AG	27606-27766	GT	AGG
(GTG)	 AG	28033-28236	GT	AGG
(GAG)	 AG	28342-28458	GT	AGG
(GTG)	 AG	28767-28847	TG	GAT
-recovered pasa_asmbl_49656.p1, terminal, 28767, 28847
-recovered pasa_asmbl_49656.p1, internal, 24633, 24696
-recovered pasa_asmbl_49656.p1, internal, 26971, 27141
-recovered pasa_asmbl_49656.p1, internal, 27400, 27504
-recovered pasa_asmbl_49656.p1, internal, 27606, 27766
-recovered pasa_asmbl_49656.p1, internal, 28033, 28236
-recovered pasa_asmbl_49656.p1, internal, 28342, 28458
Valid prediction for GlimmerHMM_glimmerT_17074-T1
Valid prediction for snap_scaffold_7-snap.619-T1
Valid prediction for snap_scaffold_7-snap.645-T1
Valid prediction for GlimmerHMM_glimmerT_17056-T1
Valid prediction for Augustus_model.g11387.t1
Couldn't classify 174305, 174440
Sorry, prediction pasa_asmbl_49663.p1 fails validation.
(ATC)	 AG	174305-174440	GT	CAG
(GAT)	 AG	174644-174788	GT	GGG
(GCA)	 AG	175255-175343	GT	ACG
(TTG)	 AG	175569-175664	GT	AGG
(GTG)	 AG	175993-176073	GT	ATG
(TGG)	 AG	176202-176294	GT	CGG
(GTG)	 AG	176592-176710	GT	TGG
(TAC)	 AG	176984-177093	GT	ATG
(GTT)	 AG	177721-177880	GT	TGG
(TGG)	 AG	178432-178568	GT	CTG
(GTA)	 AG	178760-179228	CT	GAC
-recovered pasa_asmbl_49663.p1, terminal, 178760, 179228
-recovered pasa_asmbl_49663.p1, internal, 174305, 174440
-recovered pasa_asmbl_49663.p1, internal, 174644, 174788
-recovered pasa_asmbl_49663.p1, internal, 175255, 175343
-recovered pasa_asmbl_49663.p1, internal, 175569, 175664
-recovered pasa_asmbl_49663.p1, internal, 175993, 176073
-recovered pasa_asmbl_49663.p1, internal, 176202, 176294
-recovered pasa_asmbl_49663.p1, internal, 176592, 176710
-recovered pasa_asmbl_49663.p1, internal, 176984, 177093
-recovered pasa_asmbl_49663.p1, internal, 177721, 177880
-recovered pasa_asmbl_49663.p1, internal, 178432, 178568
Valid prediction for snap_scaffold_7-snap.609-T1
Valid prediction for snap_scaffold_7-snap.639-T1
Couldn't classify 180310, 180477
Sorry, prediction pasa_asmbl_49666.p1 fails validation.
(ACA)	 GC	180310-180477	GT	ATG
(ACC)	 AG	181275-181335	GT	AGG
(TTG)	 AG	181442-181533	GT	AGG
(GAG)	 AG	181745-181879	GT	ACG
(AAA)	 AG	181996-182049	GT	CGG
(GAC)	 AG	182168-182342	GT	CGG
(TGA)	 AG	182667-182728	GT	TAG
(TTC)	 AG	183242-183457	TG	AGT
-recovered pasa_asmbl_49666.p1, terminal, 183242, 183457
-recovered pasa_asmbl_49666.p1, internal, 181275, 181335
-recovered pasa_asmbl_49666.p1, internal, 181442, 181533
-recovered pasa_asmbl_49666.p1, internal, 181745, 181879
-recovered pasa_asmbl_49666.p1, internal, 181996, 182049
-recovered pasa_asmbl_49666.p1, internal, 182168, 182342
-recovered pasa_asmbl_49666.p1, internal, 182667, 182728
Valid prediction for HiQ_model.g11371.t1
Valid prediction for snap_scaffold_7-snap.623-T1
Valid prediction for Augustus_model.g11386.t1
Couldn't classify 160028, 161192
Sorry, prediction pasa_asmbl_49661.p1 fails validation.
(ATG)	 GA	157974-157993	GT	AGG
(GAA)	 AG	158228-158296	GT	CTG
(GGT)	 AG	158409-158483	GT	CTG
(TGA)	 AG	158954-159139	GT	AGG
(GGA)	 AG	159322-159387	GT	GGG
(GCT)	 AG	160028-161192	CA	AGC
-recovered pasa_asmbl_49661.p1, initial, 157974, 157993
-recovered pasa_asmbl_49661.p1, internal, 158228, 158296
-recovered pasa_asmbl_49661.p1, internal, 158409, 158483
-recovered pasa_asmbl_49661.p1, internal, 158954, 159139
-recovered pasa_asmbl_49661.p1, internal, 159322, 159387
Valid prediction for snap_scaffold_7-snap.637-T1
Valid prediction for GlimmerHMM_glimmerT_17065-T1
Valid prediction for snap_scaffold_7-snap.649-T1
Valid prediction for Augustus_model.g11385.t1
Valid prediction for snap_scaffold_7-snap.648-T1
Valid prediction for Augustus_model.g11373.t1
Valid prediction for snap_scaffold_7-snap.640-T1
Valid prediction for snap_scaffold_7-snap.603-T1
Valid prediction for snap_scaffold_7-snap.610-T1
Valid prediction for GlimmerHMM_glimmerT_17071-T1
Valid prediction for snap_scaffold_7-snap.631-T1
Valid prediction for GlimmerHMM_glimmerT_17072-T1
Valid prediction for CodingQuarry_transcript_57450-T1
Valid prediction for snap_scaffold_7-snap.621-T1
Valid prediction for snap_scaffold_7-snap.628-T1
Valid prediction for snap_scaffold_7-snap.605-T1
Valid prediction for GlimmerHMM_glimmerT_17070-T1
Valid prediction for snap_scaffold_7-snap.643-T1
Valid prediction for snap_scaffold_7-snap.629-T1
Couldn't classify 163214, 163476
Sorry, prediction pasa_asmbl_49662.p1 fails validation.
(ATG)	 GG	162406-162520	GT	TGG
(CCT)	 AG	163214-163476	CT	ACC
-recovered pasa_asmbl_49662.p1, initial, 162406, 162520
Valid prediction for snap_scaffold_7-snap.608-T1
Valid prediction for GlimmerHMM_glimmerT_17057-T1
Valid prediction for Augustus_model.g11370.t1
Valid prediction for GlimmerHMM_glimmerT_17073-T1
Valid prediction for snap_scaffold_7-snap.626-T1
Couldn't classify 184546, 184569
Couldn't classify 185024, 185132
Sorry, prediction pasa_asmbl_49668.p1 fails validation.
(CTT)	 TA	184546-184569	AT	GGA
(ATC)	 AC	185024-185132	GT	AGG
(CTT)	 AG	185420-185478	GT	CTG
(GAC)	 AG	185575-185678	GT	AGG
(GTA)	 AG	185770-185843	GT	AGG
(CTG)	 AG	186095-186180	GT	CTG
(GAT)	 AG	186357-186409	GT	GTG
(AGC)	 AG	186520-186550	GT	AGG
(GAA)	 AG	186691-186732	AT	AGA
add_exon() Sorry, pasa_asmbl_49668.p1 185770-185843-terminal-2 is invalid.
-recovered pasa_asmbl_49668.p1, terminal, 185770, 185843
-recovered pasa_asmbl_49668.p1, terminal, 186691, 186732
-recovered pasa_asmbl_49668.p1, internal, 185420, 185478
-recovered pasa_asmbl_49668.p1, internal, 185575, 185678
-recovered pasa_asmbl_49668.p1, internal, 185770, 185843
-recovered pasa_asmbl_49668.p1, internal, 186095, 186180
-recovered pasa_asmbl_49668.p1, internal, 186357, 186409
-recovered pasa_asmbl_49668.p1, internal, 186520, 186550
Valid prediction for Augustus_model.g11384.t1
Valid prediction for Augustus_model.g11372.t1
Valid prediction for GlimmerHMM_glimmerT_17063-T1
Valid prediction for snap_scaffold_7-snap.613-T1
Valid prediction for snap_scaffold_7-snap.607-T1
Valid prediction for GlimmerHMM_glimmerT_17062-T1
Valid prediction for snap_scaffold_7-snap.615-T1
Valid prediction for GlimmerHMM_glimmerT_17054-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_17059-T1
Valid prediction for snap_scaffold_7-snap.622-T1
Valid prediction for snap_scaffold_7-snap.647-T1
Couldn't classify 128379, 128415
Sorry, prediction pasa_asmbl_51528.p1 fails validation.
(ATG)	 TG	126691-126780	GT	AGG
(GGA)	 AG	127072-127152	GT	AGG
(GTG)	 AG	128107-128195	GT	AAG
(GGA)	 AG	128379-128415	GA	GAG
-recovered pasa_asmbl_51528.p1, initial, 126691, 126780
-recovered pasa_asmbl_51528.p1, internal, 127072, 127152
-recovered pasa_asmbl_51528.p1, internal, 128107, 128195
Valid prediction for snap_scaffold_7-snap.644-T1
Valid prediction for snap_scaffold_7-snap.646-T1
Valid prediction for snap_scaffold_7-snap.604-T1
Valid prediction for Augustus_model.g11379.t1
Couldn't classify 47336, 47417
Sorry, prediction pasa_asmbl_50768.p1 fails validation.
(ATG)	 CA	42718-42783	GT	AGG
(GTC)	 AG	43952-44038	GT	TGG
(GGA)	 AG	45518-45600	GT	AGG
(TAC)	 AG	47336-47417	GT	TGG
-recovered pasa_asmbl_50768.p1, initial, 42718, 42783
-recovered pasa_asmbl_50768.p1, internal, 43952, 44038
-recovered pasa_asmbl_50768.p1, internal, 45518, 45600
-recovered pasa_asmbl_50768.p1, internal, 47336, 47417
Valid prediction for snap_scaffold_7-snap.617-T1
Valid prediction for snap_scaffold_7-snap.641-T1
Valid prediction for Augustus_model.g11378.t1
Valid prediction for snap_scaffold_7-snap.636-T1
Valid prediction for snap_scaffold_7-snap.620-T1
Valid prediction for GlimmerHMM_glimmerT_17069-T1
Valid prediction for Augustus_model.g11382.t1
Valid prediction for Augustus_model.g11383.t1
Valid prediction for Augustus_model.g11381.t1
Valid prediction for snap_scaffold_7-snap.630-T1
Valid prediction for CodingQuarry_transcript_57452-T1
Valid prediction for snap_scaffold_7-snap.606-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_7-snap.635-T1
Valid prediction for snap_scaffold_7-snap.611-T1
Valid prediction for snap_scaffold_7-snap.616-T1
Valid prediction for snap_scaffold_7-snap.624-T1
Valid prediction for snap_scaffold_7-snap.642-T1
Valid prediction for GlimmerHMM_glimmerT_17068-T1
Valid prediction for Augustus_model.g11377.t1
Valid prediction for Augustus_model.g11376.t1
Valid prediction for GlimmerHMM_glimmerT_17064-T1
Valid prediction for snap_scaffold_7-snap.625-T1
Valid prediction for GlimmerHMM_glimmerT_17053-T1
Valid prediction for GlimmerHMM_glimmerT_17052-T1
Valid prediction for snap_scaffold_7-snap.627-T1
Valid prediction for Augustus_model.g11375.t1
Valid prediction for snap_scaffold_7-snap.618-T1
Valid prediction for snap_scaffold_7-snap.633-T1
Valid prediction for GlimmerHMM_glimmerT_17066-T1
Valid prediction for snap_scaffold_7-snap.650-T1
Valid prediction for snap_scaffold_7-snap.638-T1
Valid prediction for GlimmerHMM_glimmerT_17067-T1
Valid prediction for Augustus_model.g11374.t1
Valid prediction for snap_scaffold_7-snap.612-T1
Valid prediction for GlimmerHMM_glimmerT_17058-T1
Valid prediction for GlimmerHMM_glimmerT_17055-T1
Valid prediction for GlimmerHMM_glimmerT_17060-T1
Valid prediction for snap_scaffold_7-snap.634-T1
Valid prediction for GlimmerHMM_glimmerT_17061-T1
Valid prediction for Augustus_model.g11380.t1
Valid prediction for snap_scaffold_7-snap.632-T1
Valid prediction for snap_scaffold_7-snap.614-T1
Valid prediction for snap_scaffold_7-snap.602-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11891, rend_intergenic: 6925  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14623, rend_intergenic: 12466  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37574, rend_intergenic: 16019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45491, rend_intergenic: 37771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46907, rend_intergenic: 46043  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48181, rend_intergenic: 47285  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52032, rend_intergenic: 48252  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72669, rend_intergenic: 66258  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79079, rend_intergenic: 73269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85703, rend_intergenic: 80654  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90224, rend_intergenic: 86821  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131093, rend_intergenic: 120489  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151240, rend_intergenic: 136407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157261, rend_intergenic: 156335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166287, rend_intergenic: 163219  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167617, rend_intergenic: 166383  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169279, rend_intergenic: 167794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170664, rend_intergenic: 169893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177097, rend_intergenic: 170925  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179017, rend_intergenic: 177734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187793, rend_intergenic: 183307  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 194765
-exon list size: 438


building trellis

0.2    
0.5    
0.7    
0.9    
1.1    
1.4    
1.6    
1.8    
2.0    
2.3    
2.5    
2.7    
3.0    
3.2    
3.4    
3.6    
3.9    
4.1    
4.3    
4.5    
4.8    
5.0    
5.2    
5.5    
5.7    
5.9    
6.1    
6.4    
6.6    
6.8    
7.0    
7.3    
7.5    
7.7    
8.0    
8.2    
8.4    
8.6    
8.9    
9.1    
9.3    
9.5    
9.8    
10.0    
10.2    
10.5    
10.7    
10.9    
11.1    
11.4    
11.6    
11.8    
12.0    
12.3    
12.5    
12.7    
13.0    
13.2    
13.4    
13.6    
13.9    
14.1    
14.3    
14.5    
14.8    
15.0    
15.2    
15.5    
15.7    
15.9    
16.1    
16.4    
16.6    
16.8    
17.0    
17.3    
17.5    
17.7    
18.0    
18.2    
18.4    
18.6    
18.9    
19.1    
19.3    
19.5    
19.8    
20.0    
20.2    
20.5    
20.7    
20.9    
21.1    
21.4    
21.6    
21.8    
22.0    
22.3    
22.5    
22.7    
23.0    
23.2    
23.4    
23.6    
23.9    
24.1    
24.3    
24.5    
24.8    
25.0    
25.2    
25.5    
25.7    
25.9    
26.1    
26.4    
26.6    
26.8    
27.0    
27.3    
27.5    
27.7    
28.0    
28.2    
28.4    
28.6    
28.9    
29.1    
29.3    
29.5    
29.8    
30.0    
30.2    
30.5    
30.7    
30.9    
31.1    
31.4    
31.6    
31.8    
32.0    
32.3    
32.5    
32.7    
33.0    
33.2    
33.4    
33.6    
33.9    
34.1    
34.3    
34.5    
34.8    
35.0    
35.2    
35.5    
35.7    
35.9    
36.1    
36.4    
36.6    
36.8    
37.0    
37.3    
37.5    
37.7    
38.0    
38.2    
38.4    
38.6    
38.9    
39.1    
39.3    
39.5    
39.8    
40.0    
40.2    
40.5    
40.7    
40.9    
41.1    
41.4    
41.6    
41.8    
42.0    
42.3    
42.5    
42.7    
43.0    
43.2    
43.4    
43.6    
43.9    
44.1    
44.3    
44.5    
44.8    
45.0    
45.2    
45.5    
45.7    
45.9    
46.1    
46.4    
46.6    
46.8    
47.0    
47.3    
47.5    
47.7    
48.0    
48.2    
48.4    
48.6    
48.9    
49.1    
49.3    
49.5    
49.8    
50.0    
50.2    
50.5    
50.7    
50.9    
51.1    
51.4    
51.6    
51.8    
52.0    
52.3    
52.5    
52.7    
53.0    
53.2    
53.4    
53.6    
53.9    
54.1    
54.3    
54.5    
54.8    
55.0    
55.2    
55.5    
55.7    
55.9    
56.1    
56.4    
56.6    
56.8    
57.0    
57.3    
57.5    
57.7    
58.0    
58.2    
58.4    
58.6    
58.9    
59.1    
59.3    
59.5    
59.8    
60.0    
60.2    
60.5    
60.7    
60.9    
61.1    
61.4    
61.6    
61.8    
62.0    
62.3    
62.5    
62.7    
63.0    
63.2    
63.4    
63.6    
63.9    
64.1    
64.3    
64.5    
64.8    
65.0    
65.2    
65.5    
65.7    
65.9    
66.1    
66.4    
66.6    
66.8    
67.0    
67.3    
67.5    
67.7    
68.0    
68.2    
68.4    
68.6    
68.9    
69.1    
69.3    
69.5    
69.8    
70.0    
70.2    
70.5    
70.7    
70.9    
71.1    
71.4    
71.6    
71.8    
72.0    
72.3    
72.5    
72.7    
73.0    
73.2    
73.4    
73.6    
73.9    
74.1    
74.3    
74.5    
74.8    
75.0    
75.2    
75.5    
75.7    
75.9    
76.1    
76.4    
76.6    
76.8    
77.0    
77.3    
77.5    
77.7    
78.0    
78.2    
78.4    
78.6    
78.9    
79.1    
79.3    
79.5    
79.8    
80.0    
80.2    
80.5    
80.7    
80.9    
81.1    
81.4    
81.6    
81.8    
82.0    
82.3    
82.5    
82.7    
83.0    
83.2    
83.4    
83.6    
83.9    
84.1    
84.3    
84.5    
84.8    
85.0    
85.2    
85.5    
85.7    
85.9    
86.1    
86.4    
86.6    
86.8    
87.0    
87.3    
87.5    
87.7    
88.0    
88.2    
88.4    
88.6    
88.9    
89.1    
89.3    
89.5    
89.8    
90.0    
90.2    
90.5    
90.7    
90.9    
91.1    
91.4    
91.6    
91.8    
92.0    
92.3    
92.5    
92.7    
93.0    
93.2    
93.4    
93.6    
93.9    
94.1    
94.3    
94.5    
94.8    
95.0    
95.2    
95.5    
95.7    
95.9    
96.1    
96.4    
96.6    
96.8    
97.0    
97.3    
97.5    
97.7    
98.0    
98.2    
98.4    
98.6    
98.9    
99.1    
99.3    
99.5    
99.8    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 11891, rend_intergenic: 6925  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14623, rend_intergenic: 12466  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37574, rend_intergenic: 16019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45491, rend_intergenic: 37771  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46907, rend_intergenic: 46043  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48181, rend_intergenic: 47285  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52032, rend_intergenic: 48252  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72669, rend_intergenic: 66258  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79079, rend_intergenic: 73269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85703, rend_intergenic: 80654  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90224, rend_intergenic: 86821  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131093, rend_intergenic: 120489  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151240, rend_intergenic: 136407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157261, rend_intergenic: 156335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166287, rend_intergenic: 163219  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167617, rend_intergenic: 166383  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169279, rend_intergenic: 167794  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170664, rend_intergenic: 169893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177097, rend_intergenic: 170925  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179017, rend_intergenic: 177734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187793, rend_intergenic: 183307  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support