-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_7/scaffold_7_18663842-18980614 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_7-snap.3669-T1 Valid prediction for snap_scaffold_7-snap.3643-T1 Valid prediction for GlimmerHMM_glimmerT_19041-T1 Valid prediction for snap_scaffold_7-snap.3608-T1 Valid prediction for snap_scaffold_7-snap.3659-T1 Valid prediction for snap_scaffold_7-snap.3618-T1 Valid prediction for GlimmerHMM_glimmerT_19057-T1 Valid prediction for GlimmerHMM_glimmerT_19044-T1 Valid prediction for snap_scaffold_7-snap.3638-T1 Valid prediction for Augustus_model.g12762.t1 Valid prediction for GlimmerHMM_glimmerT_19070-T1 Valid prediction for snap_scaffold_7-snap.3647-T1 Valid prediction for CodingQuarry_transcript_57772-T1 Valid prediction for GlimmerHMM_glimmerT_19062-T1 Couldn't classify 134139, 134317 Sorry, prediction pasa_asmbl_50536.p2 fails validation. (ATG) CC 130496-130592 GT TGG (GGA) AG 133330-133393 GT AGG (AAG) AG 133496-133558 GT AGG (GTG) AG 133693-133796 GT AGG (GAG) AG 134139-134317 AA CCA -recovered pasa_asmbl_50536.p2, initial, 130496, 130592 -recovered pasa_asmbl_50536.p2, internal, 133330, 133393 -recovered pasa_asmbl_50536.p2, internal, 133496, 133558 -recovered pasa_asmbl_50536.p2, internal, 133693, 133796 Valid prediction for snap_scaffold_7-snap.3661-T1 Valid prediction for Augustus_model.g12761.t1 Valid prediction for GlimmerHMM_glimmerT_19059-T1 Valid prediction for snap_scaffold_7-snap.3646-T1 Valid prediction for GlimmerHMM_glimmerT_19053-T1 Valid prediction for GlimmerHMM_glimmerT_19039-T1 Valid prediction for snap_scaffold_7-snap.3614-T1 Valid prediction for HiQ_model.g12750.t1 Valid prediction for snap_scaffold_7-snap.3663-T1 Couldn't classify 119620, 119683 Sorry, prediction pasa_asmbl_50534.p1 fails validation. (TCT) GC 119620-119683 GT AGG (TCC) AG 120409-120560 GT AGG (GTG) AG 120660-120809 GT TGG (TCT) AG 120888-120992 GT AGG (ATT) AG 121087-121245 GT ATG (GTC) AG 121665-121755 GT AGG (GCC) AG 121834-121958 GT AGG (GTA) AG 122116-122260 GT AGG (GTC) AG 122794-122867 GT AGG (AGG) AG 122983-123082 GT AGG (GCC) AG 123273-123493 GT AGG (GTG) AG 123814-123951 GT TGG (GTA) AG 124085-124280 GT CAG (TTA) AG 124427-124548 GT AGG (GTC) AG 125096-125282 GT CGG (AGG) AG 125438-125533 GT GGG (GGG) AG 126500-126681 GA AGG -recovered pasa_asmbl_50534.p1, terminal, 126500, 126681 -recovered pasa_asmbl_50534.p1, internal, 120409, 120560 -recovered pasa_asmbl_50534.p1, internal, 120660, 120809 -recovered pasa_asmbl_50534.p1, internal, 120888, 120992 -recovered pasa_asmbl_50534.p1, internal, 121087, 121245 -recovered pasa_asmbl_50534.p1, internal, 121665, 121755 -recovered pasa_asmbl_50534.p1, internal, 121834, 121958 -recovered pasa_asmbl_50534.p1, internal, 122116, 122260 -recovered pasa_asmbl_50534.p1, internal, 122794, 122867 -recovered pasa_asmbl_50534.p1, internal, 122983, 123082 -recovered pasa_asmbl_50534.p1, internal, 123273, 123493 -recovered pasa_asmbl_50534.p1, internal, 123814, 123951 -recovered pasa_asmbl_50534.p1, internal, 124085, 124280 -recovered pasa_asmbl_50534.p1, internal, 124427, 124548 -recovered pasa_asmbl_50534.p1, internal, 125096, 125282 -recovered pasa_asmbl_50534.p1, internal, 125438, 125533 Valid prediction for snap_scaffold_7-snap.3610-T1 Valid prediction for GlimmerHMM_glimmerT_19033-T1 Valid prediction for snap_scaffold_7-snap.3656-T1 Valid prediction for snap_scaffold_7-snap.3654-T1 Valid prediction for snap_scaffold_7-snap.3626-T1 Valid prediction for snap_scaffold_7-snap.3621-T1 Valid prediction for snap_scaffold_7-snap.3613-T1 Couldn't classify 139750, 140139 Sorry, prediction pasa_asmbl_50537.p1 fails validation. (GGG) CA 139750-140139 CT TGC Valid prediction for snap_scaffold_7-snap.3665-T1 Valid prediction for GlimmerHMM_glimmerT_19064-T1 Valid prediction for GlimmerHMM_glimmerT_19067-T1 Valid prediction for HiQ_model.g12758.t1 Valid prediction for snap_scaffold_7-snap.3615-T1 Valid prediction for snap_scaffold_7-snap.3644-T1 Couldn't classify 166862, 166982 Sorry, prediction pasa_asmbl_50646.p1 fails validation. (GGT) AG 166862-166982 GT AGG (GTG) AG 167897-168075 CA AGC -recovered pasa_asmbl_50646.p1, terminal, 167897, 168075 -recovered pasa_asmbl_50646.p1, internal, 166862, 166982 Valid prediction for GlimmerHMM_glimmerT_19046-T1 Valid prediction for GlimmerHMM_glimmerT_19034-T1 Valid prediction for snap_scaffold_7-snap.3625-T1 Valid prediction for snap_scaffold_7-snap.3612-T1 Valid prediction for GlimmerHMM_glimmerT_19049-T1 Valid prediction for CodingQuarry_transcript_57781-T1 Valid prediction for GlimmerHMM_glimmerT_19065-T1 Valid prediction for snap_scaffold_7-snap.3671-T1 Valid prediction for CodingQuarry_transcript_57780-T1 Valid prediction for GlimmerHMM_glimmerT_19058-T1 Valid prediction for Augustus_model.g12764.t1 Valid prediction for Augustus_model.g12749.t1 Valid prediction for snap_scaffold_7-snap.3623-T1 Valid prediction for snap_scaffold_7-snap.3631-T1 Valid prediction for GlimmerHMM_glimmerT_19069-T1 Valid prediction for GlimmerHMM_glimmerT_19072-T1 Valid prediction for GlimmerHMM_glimmerT_19047-T1 Valid prediction for snap_scaffold_7-snap.3634-T1 Valid prediction for GlimmerHMM_glimmerT_19055-T1 Valid prediction for snap_scaffold_7-snap.3658-T1 Valid prediction for snap_scaffold_7-snap.3662-T1 Valid prediction for snap_scaffold_7-snap.3641-T1 Valid prediction for snap_scaffold_7-snap.3649-T1 Valid prediction for snap_scaffold_7-snap.3628-T1 Valid prediction for snap_scaffold_7-snap.3617-T1 Valid prediction for GlimmerHMM_glimmerT_19051-T1 Valid prediction for Augustus_model.g12765.t1 Valid prediction for snap_scaffold_7-snap.3619-T1 Valid prediction for snap_scaffold_7-snap.3627-T1 Valid prediction for snap_scaffold_7-snap.3632-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for Augustus_model.g12767.t1 Valid prediction for Augustus_model.g12760.t1 Valid prediction for snap_scaffold_7-snap.3630-T1 Valid prediction for snap_scaffold_7-snap.3652-T1 Valid prediction for snap_scaffold_7-snap.3667-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_19063-T1 Valid prediction for GlimmerHMM_glimmerT_19073-T1 Couldn't classify 23171, 23277 Sorry, prediction pasa_asmbl_51508.p1 fails validation. (ATG) GC 21536-21636 GT AGG (GGG) AG 22148-22262 GT AGG (GTG) AG 22380-22551 GT CGG (ACC) AG 23171-23277 GT AAG -recovered pasa_asmbl_51508.p1, initial, 21536, 21636 -recovered pasa_asmbl_51508.p1, internal, 22148, 22262 -recovered pasa_asmbl_51508.p1, internal, 22380, 22551 -recovered pasa_asmbl_51508.p1, internal, 23171, 23277 Valid prediction for Augustus_model.g12763.t1 Valid prediction for snap_scaffold_7-snap.3636-T1 Valid prediction for CodingQuarry_transcript_57779-T1 Valid prediction for snap_scaffold_7-snap.3650-T1 Valid prediction for GlimmerHMM_glimmerT_19054-T1 Valid prediction for CodingQuarry_transcript_57775-T1 Valid prediction for snap_scaffold_7-snap.3640-T1 Valid prediction for snap_scaffold_7-snap.3648-T1 Valid prediction for GlimmerHMM_glimmerT_19050-T1 Valid prediction for GlimmerHMM_glimmerT_19071-T1 Valid prediction for Augustus_model.g12768.t1 Valid prediction for CodingQuarry_transcript_57776-T1 Valid prediction for GlimmerHMM_glimmerT_19042-T1 Valid prediction for GlimmerHMM_glimmerT_19045-T1 Valid prediction for snap_scaffold_7-snap.3620-T1 Valid prediction for snap_scaffold_7-snap.3629-T1 Valid prediction for snap_scaffold_7-snap.3645-T1 Valid prediction for snap_scaffold_7-snap.3639-T1 Valid prediction for snap_scaffold_7-snap.3651-T1 Valid prediction for GlimmerHMM_glimmerT_19036-T1 Valid prediction for CodingQuarry_transcript_57778-T1 Valid prediction for Augustus_model.g12759.t1 Valid prediction for snap_scaffold_7-snap.3653-T1 Valid prediction for CodingQuarry_transcript_57773-T1 Valid prediction for Augustus_model.g12753.t1 Valid prediction for snap_scaffold_7-snap.3664-T1 Valid prediction for GlimmerHMM_glimmerT_19043-T1 Valid prediction for Augustus_model.g12755.t1 Valid prediction for snap_scaffold_7-snap.3607-T1 Valid prediction for CodingQuarry_transcript_57777-T1 Couldn't classify 14830, 14929 Couldn't classify 18073, 18214 Sorry, prediction pasa_asmbl_51510.p2 fails validation. (GAG) TT 14830-14929 GT AGG (GCA) AG 15618-15693 GT AAG (GCA) AG 16795-16903 GT TGG (GAG) AG 17832-17950 GT AGG (CCT) AG 18073-18214 CC CCC -recovered pasa_asmbl_51510.p2, internal, 15618, 15693 -recovered pasa_asmbl_51510.p2, internal, 16795, 16903 -recovered pasa_asmbl_51510.p2, internal, 17832, 17950 Valid prediction for GlimmerHMM_glimmerT_19037-T1 Valid prediction for GlimmerHMM_glimmerT_19066-T1 Couldn't classify 32430, 32512 Couldn't classify 32895, 33091 Sorry, prediction CodingQuarry_transcript_57782-T1 fails validation. (ATG) AC 30771-30795 GT AGG (AGG) AG 31336-31433 GT AGG (GTG) AG 32047-32192 GT AGG (TAT) AG 32430-32512 TC TAT (AAC) TA 32895-33091 CC AGC -recovered CodingQuarry_transcript_57782-T1, initial, 30771, 30795 -recovered CodingQuarry_transcript_57782-T1, internal, 31336, 31433 -recovered CodingQuarry_transcript_57782-T1, internal, 32047, 32192 Valid prediction for GlimmerHMM_glimmerT_19060-T1 Valid prediction for snap_scaffold_7-snap.3657-T1 Valid prediction for Augustus_model.g12754.t1 Couldn't classify 280985, 281059 Couldn't classify 281833, 281977 Sorry, prediction pasa_asmbl_51498.p1 fails validation. (CTG) AC 280985-281059 GT AAG (GTG) AG 281540-281691 GT AGG (TGA) AG 281833-281977 TA CGT -recovered pasa_asmbl_51498.p1, internal, 281540, 281691 Couldn't classify 201862, 202125 Sorry, prediction pasa_asmbl_51504.p1 fails validation. (CCC) TC 201862-202125 GT AGG (GTA) AG 203570-203800 GT CTG (GAG) AG 204332-204410 GT CTG (TGC) AG 204838-205066 GT AGG (AGA) AG 205185-205272 GT CTG (GTG) AG 205499-205600 GT AGG (GTT) AG 205868-206041 GT TGG (GCT) AG 206920-207019 GT TGG (CTG) AG 208385-208434 GT AGG (GGC) AG 208545-208612 GT AGG (CCC) AG 208697-208805 GT AGG (GGC) AG 209173-209313 GT GGG (GCT) AG 212202-212207 GA GAG add_exon() Sorry, pasa_asmbl_51504.p1 204838-205066-terminal-3 is invalid. -recovered pasa_asmbl_51504.p1, terminal, 204838, 205066 -recovered pasa_asmbl_51504.p1, terminal, 212202, 212207 -recovered pasa_asmbl_51504.p1, internal, 203570, 203800 -recovered pasa_asmbl_51504.p1, internal, 204332, 204410 -recovered pasa_asmbl_51504.p1, internal, 204838, 205066 -recovered pasa_asmbl_51504.p1, internal, 205185, 205272 -recovered pasa_asmbl_51504.p1, internal, 205499, 205600 -recovered pasa_asmbl_51504.p1, internal, 205868, 206041 -recovered pasa_asmbl_51504.p1, internal, 206920, 207019 -recovered pasa_asmbl_51504.p1, internal, 208385, 208434 -recovered pasa_asmbl_51504.p1, internal, 208545, 208612 -recovered pasa_asmbl_51504.p1, internal, 208697, 208805 -recovered pasa_asmbl_51504.p1, internal, 209173, 209313 Valid prediction for snap_scaffold_7-snap.3635-T1 Valid prediction for HiQ_model.g12757.t1 Valid prediction for GlimmerHMM_glimmerT_19040-T1 Valid prediction for Augustus_model.g12769.t1 Valid prediction for GlimmerHMM_glimmerT_19068-T1 Valid prediction for GlimmerHMM_glimmerT_19056-T1 Valid prediction for Augustus_model.g12752.t1 Valid prediction for pasa_asmbl_51494.p1 Valid prediction for GlimmerHMM_glimmerT_19061-T1 Valid prediction for snap_scaffold_7-snap.3616-T1 Valid prediction for GlimmerHMM_glimmerT_19038-T1 Valid prediction for snap_scaffold_7-snap.3611-T1 Valid prediction for Augustus_model.g12756.t1 Valid prediction for Augustus_model.g12751.t1 Couldn't classify 304151, 304459 Sorry, prediction pasa_asmbl_50530.p1 fails validation. (ACA) TC 304151-304459 AC ACA Valid prediction for snap_scaffold_7-snap.3633-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for snap_scaffold_7-snap.3655-T1 Valid prediction for GlimmerHMM_glimmerT_19052-T1 Valid prediction for snap_scaffold_7-snap.3660-T1 Valid prediction for snap_scaffold_7-snap.3637-T1 Valid prediction for CodingQuarry_transcript_57774-T1 Valid prediction for snap_scaffold_7-snap.3642-T1 Valid prediction for snap_scaffold_7-snap.3624-T1 Valid prediction for snap_scaffold_7-snap.3622-T1 Valid prediction for Augustus_model.g12766.t1 Valid prediction for snap_scaffold_7-snap.3668-T1 Valid prediction for snap_scaffold_7-snap.3609-T1 Valid prediction for snap_scaffold_7-snap.3666-T1 Valid prediction for GlimmerHMM_glimmerT_19048-T1 Valid prediction for GlimmerHMM_glimmerT_19035-T1 Valid prediction for pasa_asmbl_51497.p1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 13695, rend_intergenic: 6080 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 20327, rend_intergenic: 17425 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31876, rend_intergenic: 20535 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34935, rend_intergenic: 33454 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53316, rend_intergenic: 35497 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60598, rend_intergenic: 53489 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64249, rend_intergenic: 62062 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72169, rend_intergenic: 64359 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79981, rend_intergenic: 73190 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89666, rend_intergenic: 80683 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100159, rend_intergenic: 97674 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108423, rend_intergenic: 102644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 114919, rend_intergenic: 108902 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126681, rend_intergenic: 122152 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142488, rend_intergenic: 131772 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160574, rend_intergenic: 142578 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164386, rend_intergenic: 160740 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165717, rend_intergenic: 164389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174792, rend_intergenic: 165814 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177487, rend_intergenic: 174812 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 182635, rend_intergenic: 178516 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186120, rend_intergenic: 182777 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202527, rend_intergenic: 189878 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203464, rend_intergenic: 202550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205277, rend_intergenic: 203513 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207233, rend_intergenic: 206105 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 232780, rend_intergenic: 207389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241743, rend_intergenic: 236655 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 256488, rend_intergenic: 242364 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261840, rend_intergenic: 258966 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 267995, rend_intergenic: 261993 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 272244, rend_intergenic: 271669 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 278754, rend_intergenic: 275766 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281071, rend_intergenic: 278959 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 283605, rend_intergenic: 281565 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 292179, rend_intergenic: 283683 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 304846, rend_intergenic: 293468 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 316773 -exon list size: 657 building trellis 0.2 0.3 0.5 0.6 0.8 0.9 1.1 1.2 1.4 1.5 1.7 1.8 2.0 2.1 2.3 2.4 2.6 2.7 2.9 3.0 3.2 3.3 3.5 3.6 3.8 3.9 4.1 4.2 4.4 4.6 4.7 4.9 5.0 5.2 5.3 5.5 5.6 5.8 5.9 6.1 6.2 6.4 6.5 6.7 6.8 7.0 7.1 7.3 7.4 7.6 7.7 7.9 8.0 8.2 8.3 8.5 8.6 8.8 9.0 9.1 9.3 9.4 9.6 9.7 9.9 10.0 10.2 10.3 10.5 10.6 10.8 10.9 11.1 11.2 11.4 11.5 11.7 11.8 12.0 12.1 12.3 12.4 12.6 12.7 12.9 13.1 13.2 13.4 13.5 13.7 13.8 14.0 14.1 14.3 14.4 14.6 14.7 14.9 15.0 15.2 15.3 15.5 15.6 15.8 15.9 16.1 16.2 16.4 16.5 16.7 16.8 17.0 17.1 17.3 17.5 17.6 17.8 17.9 18.1 18.2 18.4 18.5 18.7 18.8 19.0 19.1 19.3 19.4 19.6 19.7 19.9 20.0 20.2 20.3 20.5 20.6 20.8 20.9 21.1 21.2 21.4 21.5 21.7 21.9 22.0 22.2 22.3 22.5 22.6 22.8 22.9 23.1 23.2 23.4 23.5 23.7 23.8 24.0 24.1 24.3 24.4 24.6 24.7 24.9 25.0 25.2 25.3 25.5 25.6 25.8 25.9 26.1 26.3 26.4 26.6 26.7 26.9 27.0 27.2 27.3 27.5 27.6 27.8 27.9 28.1 28.2 28.4 28.5 28.7 28.8 29.0 29.1 29.3 29.4 29.6 29.7 29.9 30.0 30.2 30.3 30.5 30.7 30.8 31.0 31.1 31.3 31.4 31.6 31.7 31.9 32.0 32.2 32.3 32.5 32.6 32.8 32.9 33.1 33.2 33.4 33.5 33.7 33.8 34.0 34.1 34.3 34.4 34.6 34.7 34.9 35.1 35.2 35.4 35.5 35.7 35.8 36.0 36.1 36.3 36.4 36.6 36.7 36.9 37.0 37.2 37.3 37.5 37.6 37.8 37.9 38.1 38.2 38.4 38.5 38.7 38.8 39.0 39.2 39.3 39.5 39.6 39.8 39.9 40.1 40.2 40.4 40.5 40.7 40.8 41.0 41.1 41.3 41.4 41.6 41.7 41.9 42.0 42.2 42.3 42.5 42.6 42.8 42.9 43.1 43.2 43.4 43.6 43.7 43.9 44.0 44.2 44.3 44.5 44.6 44.8 44.9 45.1 45.2 45.4 45.5 45.7 45.8 46.0 46.1 46.3 46.4 46.6 46.7 46.9 47.0 47.2 47.3 47.5 47.6 47.8 48.0 48.1 48.3 48.4 48.6 48.7 48.9 49.0 49.2 49.3 49.5 49.6 49.8 49.9 50.1 50.2 50.4 50.5 50.7 50.8 51.0 51.1 51.3 51.4 51.6 51.7 51.9 52.0 52.2 52.4 52.5 52.7 52.8 53.0 53.1 53.3 53.4 53.6 53.7 53.9 54.0 54.2 54.3 54.5 54.6 54.8 54.9 55.1 55.2 55.4 55.5 55.7 55.8 56.0 56.1 56.3 56.4 56.6 56.8 56.9 57.1 57.2 57.4 57.5 57.7 57.8 58.0 58.1 58.3 58.4 58.6 58.7 58.9 59.0 59.2 59.3 59.5 59.6 59.8 59.9 60.1 60.2 60.4 60.5 60.7 60.8 61.0 61.2 61.3 61.5 61.6 61.8 61.9 62.1 62.2 62.4 62.5 62.7 62.8 63.0 63.1 63.3 63.4 63.6 63.7 63.9 64.0 64.2 64.3 64.5 64.6 64.8 64.9 65.1 65.3 65.4 65.6 65.7 65.9 66.0 66.2 66.3 66.5 66.6 66.8 66.9 67.1 67.2 67.4 67.5 67.7 67.8 68.0 68.1 68.3 68.4 68.6 68.7 68.9 69.0 69.2 69.3 69.5 69.7 69.8 70.0 70.1 70.3 70.4 70.6 70.7 70.9 71.0 71.2 71.3 71.5 71.6 71.8 71.9 72.1 72.2 72.4 72.5 72.7 72.8 73.0 73.1 73.3 73.4 73.6 73.7 73.9 74.1 74.2 74.4 74.5 74.7 74.8 75.0 75.1 75.3 75.4 75.6 75.7 75.9 76.0 76.2 76.3 76.5 76.6 76.8 76.9 77.1 77.2 77.4 77.5 77.7 77.8 78.0 78.1 78.3 78.5 78.6 78.8 78.9 79.1 79.2 79.4 79.5 79.7 79.8 80.0 80.1 80.3 80.4 80.6 80.7 80.9 81.0 81.2 81.3 81.5 81.6 81.8 81.9 82.1 82.2 82.4 82.5 82.7 82.9 83.0 83.2 83.3 83.5 83.6 83.8 83.9 84.1 84.2 84.4 84.5 84.7 84.8 85.0 85.1 85.3 85.4 85.6 85.7 85.9 86.0 86.2 86.3 86.5 86.6 86.8 86.9 87.1 87.3 87.4 87.6 87.7 87.9 88.0 88.2 88.3 88.5 88.6 88.8 88.9 89.1 89.2 89.4 89.5 89.7 89.8 90.0 90.1 90.3 90.4 90.6 90.7 90.9 91.0 91.2 91.4 91.5 91.7 91.8 92.0 92.1 92.3 92.4 92.6 92.7 92.9 93.0 93.2 93.3 93.5 93.6 93.8 93.9 94.1 94.2 94.4 94.5 94.7 94.8 95.0 95.1 95.3 95.4 95.6 95.8 95.9 96.1 96.2 96.4 96.5 96.7 96.8 97.0 97.1 97.3 97.4 97.6 97.7 97.9 98.0 98.2 98.3 98.5 98.6 98.8 98.9 99.1 99.2 99.4 99.5 99.7 99.8 -found 48 predictions from path traversal Error with prediction: snap lend_intergenic: 13695, rend_intergenic: 6080 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 20327, rend_intergenic: 17425 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31876, rend_intergenic: 20535 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34935, rend_intergenic: 33454 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53316, rend_intergenic: 35497 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 60598, rend_intergenic: 53489 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64249, rend_intergenic: 62062 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72169, rend_intergenic: 64359 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79981, rend_intergenic: 73190 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89666, rend_intergenic: 80683 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100159, rend_intergenic: 97674 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108423, rend_intergenic: 102644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 114919, rend_intergenic: 108902 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126681, rend_intergenic: 122152 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142488, rend_intergenic: 131772 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160574, rend_intergenic: 142578 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164386, rend_intergenic: 160740 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165717, rend_intergenic: 164389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174792, rend_intergenic: 165814 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177487, rend_intergenic: 174812 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 182635, rend_intergenic: 178516 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186120, rend_intergenic: 182777 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202527, rend_intergenic: 189878 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203464, rend_intergenic: 202550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205277, rend_intergenic: 203513 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207233, rend_intergenic: 206105 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 232780, rend_intergenic: 207389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 241743, rend_intergenic: 236655 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 256488, rend_intergenic: 242364 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261840, rend_intergenic: 258966 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 267995, rend_intergenic: 261993 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 272244, rend_intergenic: 271669 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 278754, rend_intergenic: 275766 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 281071, rend_intergenic: 278959 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 283605, rend_intergenic: 281565 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 292179, rend_intergenic: 283683 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 304846, rend_intergenic: 293468 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 26 predictions persist after filtering for low support -building DP trellis -building trellis in range 305410 - 316773 -exon list size: 3 building trellis 20.0 40.0 60.0 80.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support