-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_663

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60600-T1
Couldn't classify 381, 543
Sorry, prediction Augustus_model.g40118.t1 fails validation.
(AGG)	 AG	381-543	GT	AGG
(AAA)	 AG	986-1141	GC	GAG
-recovered Augustus_model.g40118.t1, terminal, 986, 1141
-recovered Augustus_model.g40118.t1, internal, 381, 543
-recovered Augustus_model.g40118.t1, internal, 986, 1141
Couldn't classify 381, 522
Sorry, prediction snap_scaffold_663-snap.1-T1 fails validation.
(AGG)	 AG	381-522	GT	TGG
(AAA)	 AG	986-1141	GC	GAG
-recovered snap_scaffold_663-snap.1-T1, terminal, 986, 1141
-recovered snap_scaffold_663-snap.1-T1, internal, 381, 522
-recovered snap_scaffold_663-snap.1-T1, internal, 986, 1141

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 5067
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support