-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_639

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 457, 556
Couldn't classify 3997, 4062
Sorry, prediction snap_scaffold_639-snap.1-T1 fails validation.
(AAA)	 AG	457-556	GT	TGG
(TTC)	 AG	2046-2152	GT	CGG
(TTG)	 AG	3997-4062	GT	TGG
-recovered snap_scaffold_639-snap.1-T1, internal, 457, 556
-recovered snap_scaffold_639-snap.1-T1, internal, 2046, 2152
-recovered snap_scaffold_639-snap.1-T1, internal, 3997, 4062

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1157, 1276
Couldn't classify 3904, 4028
Sorry, prediction snap_scaffold_639-snap.2-T1 fails validation.
(AAC)	 AG	1157-1276	GT	GGG
(GTA)	 AG	2789-2937	GT	GGG
(GAT)	 AG	3904-4028	GT	GGG
-recovered snap_scaffold_639-snap.2-T1, internal, 1157, 1276
-recovered snap_scaffold_639-snap.2-T1, internal, 2789, 2937
-recovered snap_scaffold_639-snap.2-T1, internal, 3904, 4028
Valid prediction for Augustus_model.g40095.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4062, rend_intergenic: 1211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 5238
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 4062, rend_intergenic: 1211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support