-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_636

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_60570-T1
Couldn't classify 5009, 5052
Sorry, prediction snap_scaffold_636-snap.1-T1 fails validation.
(ATG)	 CG	84-181	GT	CTG
(TCA)	 AG	1574-1689	GT	GCG
(TAT)	 AG	4237-4353	GT	ATG
(GCC)	 AG	5009-5052	GT	AGG
-recovered snap_scaffold_636-snap.1-T1, initial, 84, 181
-recovered snap_scaffold_636-snap.1-T1, internal, 1574, 1689
-recovered snap_scaffold_636-snap.1-T1, internal, 4237, 4353
-recovered snap_scaffold_636-snap.1-T1, internal, 5009, 5052

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60571-T1
add_exon() Sorry, GlimmerHMM_glimmerT_60571-T1 558-721-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 5241
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support