-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_633

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_633-snap.3-T1
Couldn't classify 77, 331
Sorry, prediction snap_scaffold_633-snap.2-T1 fails validation.
(GGG)	 AG	77-331	GT	GAG
(GGC)	 AG	655-795	GT	TGG
(GCT)	 AG	1389-1525	GT	AGG
(GAT)	 AG	3180-3208	GA	GAG
-recovered snap_scaffold_633-snap.2-T1, terminal, 3180, 3208
-recovered snap_scaffold_633-snap.2-T1, internal, 77, 331
-recovered snap_scaffold_633-snap.2-T1, internal, 655, 795
-recovered snap_scaffold_633-snap.2-T1, internal, 1389, 1525

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_633-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 1874, rend_intergenic: 77  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 5275
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 1874, rend_intergenic: 77  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support