-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_622

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 4917, 4967
Sorry, prediction snap_scaffold_622-snap.1-T1 fails validation.
(ATG)	 AG	13-202	GT	GAG
(ATT)	 AG	1264-1292	GT	AGG
(ACG)	 AG	3501-3887	GT	AGG
(AGG)	 AG	3904-3981	GT	GGG
(GTG)	 AG	4917-4967	GT	GGG
-recovered snap_scaffold_622-snap.1-T1, initial, 13, 202
-recovered snap_scaffold_622-snap.1-T1, internal, 13, 202
-recovered snap_scaffold_622-snap.1-T1, internal, 1264, 1292
-recovered snap_scaffold_622-snap.1-T1, internal, 3501, 3887
-recovered snap_scaffold_622-snap.1-T1, internal, 3904, 3981
-recovered snap_scaffold_622-snap.1-T1, internal, 4917, 4967

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60558-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 5354
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support