-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_6/scaffold_6_17836829-18057396

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_16503-T1
Valid prediction for snap_scaffold_6-snap.3803-T1
Valid prediction for snap_scaffold_6-snap.3812-T1
Couldn't classify 58906, 59655
Sorry, prediction pasa_asmbl_47800.p1 fails validation.
(TTC)	 AC	58906-59655	GG	GAG
Valid prediction for GlimmerHMM_glimmerT_16513-T1
Valid prediction for snap_scaffold_6-snap.3799-T1
Valid prediction for snap_scaffold_6-snap.3829-T1
Valid prediction for snap_scaffold_6-snap.3785-T1
Valid prediction for GlimmerHMM_glimmerT_16493-T1
Valid prediction for pasa_asmbl_47793.p1
Valid prediction for CodingQuarry_transcript_55418-T1
Valid prediction for GlimmerHMM_glimmerT_16496-T1
Valid prediction for Augustus_model.g11045.t1
Valid prediction for Augustus_model.g11052.t1
Valid prediction for snap_scaffold_6-snap.3797-T1
Valid prediction for pasa_asmbl_47799.p1
Valid prediction for Augustus_model.g11050.t1
Valid prediction for Augustus_model.g11051.t1
Valid prediction for snap_scaffold_6-snap.3806-T1
Valid prediction for Augustus_model.g11055.t1
Valid prediction for snap_scaffold_6-snap.3787-T1
Valid prediction for snap_scaffold_6-snap.3801-T1
Valid prediction for snap_scaffold_6-snap.3821-T1
Valid prediction for GlimmerHMM_glimmerT_16497-T1
Valid prediction for snap_scaffold_6-snap.3795-T1
Valid prediction for pasa_asmbl_47801.p1
Valid prediction for snap_scaffold_6-snap.3802-T1
Valid prediction for HiQ_model.g11062.t1
Valid prediction for snap_scaffold_6-snap.3810-T1
Valid prediction for snap_scaffold_6-snap.3790-T1
Couldn't classify 3528, 3665
Couldn't classify 4707, 4907
Sorry, prediction pasa_asmbl_47990.p1 fails validation.
(GCT)	 AG	3528-3665	GT	GAG
(TCT)	 AG	4707-4907	CA	CAC
-recovered pasa_asmbl_47990.p1, internal, 3528, 3665
Valid prediction for GlimmerHMM_glimmerT_16489-T1
Couldn't classify 5736, 5873
Sorry, prediction pasa_asmbl_47790.p1 fails validation.
(GAC)	 CA	5736-5873	GT	AGG
(GCT)	 AG	6329-6562	GT	AGG
(GCG)	 AG	6911-7144	GT	AGG
(GCG)	 AG	7707-8273	GT	ACG
(GCT)	 AG	8771-8908	AG	GAA
-recovered pasa_asmbl_47790.p1, terminal, 8771, 8908
-recovered pasa_asmbl_47790.p1, internal, 6329, 6562
-recovered pasa_asmbl_47790.p1, internal, 6911, 7144
-recovered pasa_asmbl_47790.p1, internal, 7707, 8273
Valid prediction for snap_scaffold_6-snap.3816-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_6-snap.3831-T1
Valid prediction for snap_scaffold_6-snap.3805-T1
Valid prediction for GlimmerHMM_glimmerT_16500-T1
Valid prediction for Augustus_model.g11056.t1
Valid prediction for snap_scaffold_6-snap.3794-T1
Valid prediction for snap_scaffold_6-snap.3827-T1
Valid prediction for snap_scaffold_6-snap.3815-T1
Valid prediction for GlimmerHMM_glimmerT_16487-T1
Valid prediction for GlimmerHMM_glimmerT_16516-T1
Valid prediction for Augustus_model.g11046.t1
Valid prediction for snap_scaffold_6-snap.3817-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_6-snap.3824-T1
Couldn't classify 10375, 10425
Couldn't classify 13618, 13676
Sorry, prediction pasa_asmbl_47792.p1 fails validation.
(CCT)	 GT	10375-10425	GT	CGG
(GAG)	 AG	10923-10931	GT	TGG
(AGC)	 AG	11429-11587	GT	AGG
(GTG)	 AG	12219-12417	GT	GGG
(ATG)	 AG	13093-13173	GT	AAG
(TGG)	 AG	13618-13676	CT	CCC
-recovered pasa_asmbl_47792.p1, initial, 13093, 13173
-recovered pasa_asmbl_47792.p1, internal, 10923, 10931
-recovered pasa_asmbl_47792.p1, internal, 11429, 11587
-recovered pasa_asmbl_47792.p1, internal, 12219, 12417
-recovered pasa_asmbl_47792.p1, internal, 13093, 13173
Valid prediction for GlimmerHMM_glimmerT_16507-T1
Valid prediction for snap_scaffold_6-snap.3832-T1
Sorry, intron length (9) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_6-snap.3793-T1
Valid prediction for GlimmerHMM_glimmerT_16514-T1
Valid prediction for GlimmerHMM_glimmerT_16511-T1
Valid prediction for GlimmerHMM_glimmerT_16510-T1
Valid prediction for snap_scaffold_6-snap.3819-T1
Valid prediction for snap_scaffold_6-snap.3786-T1
Valid prediction for GlimmerHMM_glimmerT_16494-T1
Valid prediction for snap_scaffold_6-snap.3811-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_6-snap.3788-T1
Valid prediction for snap_scaffold_6-snap.3834-T1
Valid prediction for Augustus_model.g11054.t1
Valid prediction for GlimmerHMM_glimmerT_16506-T1
Valid prediction for Augustus_model.g11048.t1
Valid prediction for snap_scaffold_6-snap.3828-T1
Valid prediction for snap_scaffold_6-snap.3826-T1
Valid prediction for GlimmerHMM_glimmerT_16508-T1
Couldn't classify 30764, 30791
Sorry, prediction pasa_asmbl_49221.p1 fails validation.
(GGG)	 CA	30764-30791	GT	AGG
(AAA)	 AG	32113-32175	GT	ACG
(ACT)	 AG	32297-32436	GT	AGG
(GTG)	 AG	32821-33225	CA	AAC
-recovered pasa_asmbl_49221.p1, terminal, 32821, 33225
-recovered pasa_asmbl_49221.p1, internal, 32113, 32175
-recovered pasa_asmbl_49221.p1, internal, 32297, 32436
Valid prediction for Augustus_model.g11065.t1
Valid prediction for GlimmerHMM_glimmerT_16515-T1
Valid prediction for snap_scaffold_6-snap.3830-T1
Valid prediction for GlimmerHMM_glimmerT_16499-T1
Valid prediction for GlimmerHMM_glimmerT_16488-T1
Valid prediction for GlimmerHMM_glimmerT_16492-T1
Valid prediction for CodingQuarry_transcript_55419-T1
Valid prediction for CodingQuarry_transcript_55422-T1
Valid prediction for snap_scaffold_6-snap.3825-T1
Valid prediction for snap_scaffold_6-snap.3809-T1
Valid prediction for snap_scaffold_6-snap.3789-T1
Valid prediction for snap_scaffold_6-snap.3835-T1
Valid prediction for snap_scaffold_6-snap.3820-T1
Valid prediction for Augustus_model.g11057.t1
Valid prediction for Augustus_model.g11047.t1
Valid prediction for CodingQuarry_transcript_55424-T1
Valid prediction for GlimmerHMM_glimmerT_16509-T1
Valid prediction for HiQ_model.g11061.t1
Valid prediction for GlimmerHMM_glimmerT_16517-T1
Valid prediction for CodingQuarry_transcript_55423-T1
Valid prediction for snap_scaffold_6-snap.3792-T1
Valid prediction for Augustus_model.g11053.t1
Valid prediction for HiQ_model.g11049.t1
Valid prediction for GlimmerHMM_glimmerT_16495-T1
Valid prediction for GlimmerHMM_glimmerT_16491-T1
Valid prediction for GlimmerHMM_glimmerT_16512-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_6-snap.3814-T1
Valid prediction for GlimmerHMM_glimmerT_16504-T1
Valid prediction for Augustus_model.g11060.t1
Valid prediction for snap_scaffold_6-snap.3804-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_16498-T1
Valid prediction for GlimmerHMM_glimmerT_16505-T1
Valid prediction for Augustus_model.g11058.t1
Valid prediction for snap_scaffold_6-snap.3791-T1
Couldn't classify 4178, 4282
Sorry, prediction pasa_asmbl_49224.p1 fails validation.
(GTC)	 CA	4178-4282	GT	GGG
(ACT)	 AG	4696-4762	GT	TGG
(ATG)	 AG	4849-4961	GT	AGG
(GAG)	 AG	5039-5152	GT	CAG
(TGT)	 AG	6078-6262	GT	GCG
(GCC)	 AG	6807-6900	GT	ACG
(TGG)	 AG	9494-9598	TC	GAT
add_exon() Sorry, pasa_asmbl_49224.p1 4849-4961-initial-1 is invalid.
-recovered pasa_asmbl_49224.p1, initial, 4849, 4961
-recovered pasa_asmbl_49224.p1, terminal, 9494, 9598
-recovered pasa_asmbl_49224.p1, internal, 4696, 4762
-recovered pasa_asmbl_49224.p1, internal, 4849, 4961
-recovered pasa_asmbl_49224.p1, internal, 5039, 5152
-recovered pasa_asmbl_49224.p1, internal, 6078, 6262
-recovered pasa_asmbl_49224.p1, internal, 6807, 6900
Valid prediction for snap_scaffold_6-snap.3798-T1
Valid prediction for snap_scaffold_6-snap.3808-T1
Valid prediction for GlimmerHMM_glimmerT_16501-T1
Valid prediction for snap_scaffold_6-snap.3800-T1
Valid prediction for snap_scaffold_6-snap.3833-T1
Valid prediction for snap_scaffold_6-snap.3822-T1
Valid prediction for snap_scaffold_6-snap.3813-T1
Valid prediction for Augustus_model.g11063.t1
Valid prediction for GlimmerHMM_glimmerT_16502-T1
Valid prediction for GlimmerHMM_glimmerT_16518-T1
Valid prediction for HiQ_model.g11059.t1
Valid prediction for snap_scaffold_6-snap.3807-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_6-snap.3823-T1
Valid prediction for pasa_asmbl_49210.p1
Valid prediction for Augustus_model.g11064.t1
Couldn't classify 61034, 61078
Sorry, prediction pasa_asmbl_49217.p1 fails validation.
(ATG)	 GG	59456-59572	GT	TGG
(GAC)	 AG	59814-59921	GT	AGG
(AAT)	 AG	60334-60466	GT	GAG
(GCC)	 AG	60854-60957	GT	CGG
(GCC)	 AG	61034-61078	TC	AGT
-recovered pasa_asmbl_49217.p1, initial, 59456, 59572
-recovered pasa_asmbl_49217.p1, internal, 59814, 59921
-recovered pasa_asmbl_49217.p1, internal, 60334, 60466
-recovered pasa_asmbl_49217.p1, internal, 60854, 60957
Valid prediction for GlimmerHMM_glimmerT_16490-T1
Valid prediction for CodingQuarry_transcript_55421-T1
Valid prediction for snap_scaffold_6-snap.3796-T1
Valid prediction for snap_scaffold_6-snap.3818-T1
Sorry, intron length (3) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8868, rend_intergenic: 2801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25862, rend_intergenic: 10051  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37417, rend_intergenic: 33372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41798, rend_intergenic: 37424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54936, rend_intergenic: 48201  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59655, rend_intergenic: 56243  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66114, rend_intergenic: 65180  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66954, rend_intergenic: 66420  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73987, rend_intergenic: 67830  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76227, rend_intergenic: 74236  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84804, rend_intergenic: 77444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91604, rend_intergenic: 84808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97174, rend_intergenic: 91892  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110210, rend_intergenic: 101284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110334, rend_intergenic: 110309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113672, rend_intergenic: 111352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114300, rend_intergenic: 113779  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141436, rend_intergenic: 119014  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149199, rend_intergenic: 141983  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161113, rend_intergenic: 158395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170816, rend_intergenic: 166585  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178940, rend_intergenic: 170950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186105, rend_intergenic: 182836  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195173, rend_intergenic: 189100  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204851, rend_intergenic: 195724  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215783, rend_intergenic: 205324  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 220568
-exon list size: 488


building trellis

0.2    
0.4    
0.6    
0.8    
1.0    
1.2    
1.4    
1.6    
1.8    
2.0    
2.2    
2.4    
2.7    
2.9    
3.1    
3.3    
3.5    
3.7    
3.9    
4.1    
4.3    
4.5    
4.7    
4.9    
5.1    
5.3    
5.5    
5.7    
5.9    
6.1    
6.3    
6.5    
6.7    
6.9    
7.1    
7.3    
7.6    
7.8    
8.0    
8.2    
8.4    
8.6    
8.8    
9.0    
9.2    
9.4    
9.6    
9.8    
10.0    
10.2    
10.4    
10.6    
10.8    
11.0    
11.2    
11.4    
11.6    
11.8    
12.0    
12.2    
12.4    
12.7    
12.9    
13.1    
13.3    
13.5    
13.7    
13.9    
14.1    
14.3    
14.5    
14.7    
14.9    
15.1    
15.3    
15.5    
15.7    
15.9    
16.1    
16.3    
16.5    
16.7    
16.9    
17.1    
17.3    
17.6    
17.8    
18.0    
18.2    
18.4    
18.6    
18.8    
19.0    
19.2    
19.4    
19.6    
19.8    
20.0    
20.2    
20.4    
20.6    
20.8    
21.0    
21.2    
21.4    
21.6    
21.8    
22.0    
22.2    
22.4    
22.7    
22.9    
23.1    
23.3    
23.5    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.1    
25.3    
25.5    
25.7    
25.9    
26.1    
26.3    
26.5    
26.7    
26.9    
27.1    
27.3    
27.6    
27.8    
28.0    
28.2    
28.4    
28.6    
28.8    
29.0    
29.2    
29.4    
29.6    
29.8    
30.0    
30.2    
30.4    
30.6    
30.8    
31.0    
31.2    
31.4    
31.6    
31.8    
32.0    
32.2    
32.4    
32.7    
32.9    
33.1    
33.3    
33.5    
33.7    
33.9    
34.1    
34.3    
34.5    
34.7    
34.9    
35.1    
35.3    
35.5    
35.7    
35.9    
36.1    
36.3    
36.5    
36.7    
36.9    
37.1    
37.3    
37.6    
37.8    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.2    
39.4    
39.6    
39.8    
40.0    
40.2    
40.4    
40.6    
40.8    
41.0    
41.2    
41.4    
41.6    
41.8    
42.0    
42.2    
42.4    
42.7    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.1    
44.3    
44.5    
44.7    
44.9    
45.1    
45.3    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.3    
47.6    
47.8    
48.0    
48.2    
48.4    
48.6    
48.8    
49.0    
49.2    
49.4    
49.6    
49.8    
50.0    
50.2    
50.4    
50.6    
50.8    
51.0    
51.2    
51.4    
51.6    
51.8    
52.0    
52.2    
52.4    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.1    
55.3    
55.5    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.3    
57.6    
57.8    
58.0    
58.2    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.8    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.2    
62.4    
62.7    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.6    
67.8    
68.0    
68.2    
68.4    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.8    
72.0    
72.2    
72.4    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.9    
77.1    
77.3    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.6    
80.8    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.7    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.1    
84.3    
84.5    
84.7    
84.9    
85.1    
85.3    
85.5    
85.7    
85.9    
86.1    
86.3    
86.5    
86.7    
86.9    
87.1    
87.3    
87.6    
87.8    
88.0    
88.2    
88.4    
88.6    
88.8    
89.0    
89.2    
89.4    
89.6    
89.8    
90.0    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.7    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.1    
96.3    
96.5    
96.7    
96.9    
97.1    
97.3    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 31 predictions from path traversal
Error with prediction: snap lend_intergenic: 8868, rend_intergenic: 2801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25862, rend_intergenic: 10051  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37417, rend_intergenic: 33372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41798, rend_intergenic: 37424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54936, rend_intergenic: 48201  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59655, rend_intergenic: 56243  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66114, rend_intergenic: 65180  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66954, rend_intergenic: 66420  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73987, rend_intergenic: 67830  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76227, rend_intergenic: 74236  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84804, rend_intergenic: 77444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91604, rend_intergenic: 84808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97174, rend_intergenic: 91892  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110210, rend_intergenic: 101284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110334, rend_intergenic: 110309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113672, rend_intergenic: 111352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114300, rend_intergenic: 113779  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141436, rend_intergenic: 119014  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149199, rend_intergenic: 141983  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161113, rend_intergenic: 158395  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170816, rend_intergenic: 166585  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178940, rend_intergenic: 170950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186105, rend_intergenic: 182836  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195173, rend_intergenic: 189100  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 204851, rend_intergenic: 195724  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215783, rend_intergenic: 205324  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support