-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_6/scaffold_6_13914505-14149229

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 201881, 201948
Couldn't classify 204711, 204767
Sorry, prediction pasa_asmbl_47582.p1 fails validation.
(TCT)	 TG	201881-201948	GT	AGG
(AGT)	 AG	202086-202196	GT	AGG
(AGT)	 AG	202582-202692	GT	AGG
(AGT)	 AG	202823-202933	GT	AGG
(TGC)	 AG	203114-203600	GT	AGG
(GCC)	 AG	204315-204380	GT	TGG
(AGT)	 AG	204711-204767	AG	TGA
-recovered pasa_asmbl_47582.p1, internal, 202086, 202196
-recovered pasa_asmbl_47582.p1, internal, 202582, 202692
-recovered pasa_asmbl_47582.p1, internal, 202823, 202933
-recovered pasa_asmbl_47582.p1, internal, 203114, 203600
-recovered pasa_asmbl_47582.p1, internal, 204315, 204380
Valid prediction for snap_scaffold_6-snap.2930-T1
Valid prediction for pasa_asmbl_47579.p1
Valid prediction for snap_scaffold_6-snap.2936-T1
Couldn't classify 157011, 157430
Sorry, prediction pasa_asmbl_47566.p1 fails validation.
(TCG)	 AC	157011-157430	GC	GCG
Couldn't classify 187276, 187408
Couldn't classify 188290, 188495
Sorry, prediction pasa_asmbl_47576.p1 fails validation.
(TCG)	 TG	187276-187408	GT	CGG
(GTC)	 AG	188290-188495	CT	CCC
Valid prediction for snap_scaffold_6-snap.2941-T1
Valid prediction for snap_scaffold_6-snap.2907-T1
Valid prediction for GlimmerHMM_glimmerT_15878-T1
Valid prediction for CodingQuarry_transcript_55319-T1
Valid prediction for snap_scaffold_6-snap.2910-T1
Valid prediction for GlimmerHMM_glimmerT_15852-T1
Valid prediction for HiQ_model.g10653.t1
Valid prediction for Augustus_model.g10664.t1
Valid prediction for snap_scaffold_6-snap.2922-T1
Valid prediction for snap_scaffold_6-snap.2939-T1
Valid prediction for snap_scaffold_6-snap.2934-T1
Valid prediction for pasa_asmbl_47551.p1
Valid prediction for HiQ_model.g10667.t1
Valid prediction for GlimmerHMM_glimmerT_15877-T1
Valid prediction for snap_scaffold_6-snap.2937-T1
Valid prediction for GlimmerHMM_glimmerT_15874-T1
Couldn't classify 162820, 162853
Sorry, prediction pasa_asmbl_47570.p1 fails validation.
(GAC)	 CT	162820-162853	GT	CGG
(GTC)	 AG	163377-163538	GT	CGG
(GCC)	 AG	163721-163885	GT	AGG
(AGT)	 AG	164011-164154	GT	AGG
(GGC)	 AG	164552-164644	GT	AGG
(CAA)	 AG	164991-165212	GT	AGG
(GCT)	 AG	165345-165415	GT	AGG
(ATC)	 AG	166186-166325	GT	ATG
(GTG)	 AG	166501-167065	CC	GAC
-recovered pasa_asmbl_47570.p1, terminal, 166501, 167065
-recovered pasa_asmbl_47570.p1, internal, 163377, 163538
-recovered pasa_asmbl_47570.p1, internal, 163721, 163885
-recovered pasa_asmbl_47570.p1, internal, 164011, 164154
-recovered pasa_asmbl_47570.p1, internal, 164552, 164644
-recovered pasa_asmbl_47570.p1, internal, 164991, 165212
-recovered pasa_asmbl_47570.p1, internal, 165345, 165415
-recovered pasa_asmbl_47570.p1, internal, 166186, 166325
Couldn't classify 215910, 215987
Couldn't classify 223173, 223239
Sorry, prediction pasa_asmbl_47584.p1 fails validation.
(CTG)	 CC	215910-215987	GT	CCG
(GAC)	 AG	218367-218606	GT	AGG
(CTT)	 AG	218798-218886	GT	AGG
(GTA)	 AG	219979-220059	GT	ACG
(GTC)	 AG	220598-220654	GT	CTG
(GCT)	 AG	220907-220984	GT	GGG
(CTT)	 AG	221163-221230	GT	AAG
(GGC)	 AG	222840-222990	GT	AGG
(GTT)	 AG	223173-223239	GA	AGG
-recovered pasa_asmbl_47584.p1, internal, 218367, 218606
-recovered pasa_asmbl_47584.p1, internal, 218798, 218886
-recovered pasa_asmbl_47584.p1, internal, 219979, 220059
-recovered pasa_asmbl_47584.p1, internal, 220598, 220654
-recovered pasa_asmbl_47584.p1, internal, 220907, 220984
-recovered pasa_asmbl_47584.p1, internal, 221163, 221230
-recovered pasa_asmbl_47584.p1, internal, 222840, 222990
Valid prediction for Augustus_model.g10674.t1
Valid prediction for pasa_asmbl_47573.p1
Valid prediction for CodingQuarry_transcript_55322-T1
Valid prediction for pasa_asmbl_47558.p1
Valid prediction for snap_scaffold_6-snap.2904-T1
Valid prediction for CodingQuarry_transcript_55320-T1
Valid prediction for CodingQuarry_transcript_55329-T1
Valid prediction for snap_scaffold_6-snap.2908-T1
Couldn't classify 230996, 231157
Couldn't classify 231902, 232021
Sorry, prediction pasa_asmbl_47586.p2 fails validation.
(GTG)	 AC	230996-231157	GT	AGG
(GAC)	 AG	231445-231612	GT	AGG
(GGA)	 AG	231902-232021	CT	ACC
-recovered pasa_asmbl_47586.p2, internal, 231445, 231612
Valid prediction for snap_scaffold_6-snap.2924-T1
Valid prediction for HiQ_model.g10652.t1
Valid prediction for GlimmerHMM_glimmerT_15871-T1
Valid prediction for Augustus_model.g10669.t1
Valid prediction for GlimmerHMM_glimmerT_15851-T1
Valid prediction for Augustus_model.g10672.t1
Valid prediction for GlimmerHMM_glimmerT_15879-T1
Couldn't classify 61901, 61953
Sorry, prediction pasa_asmbl_47919.p1 fails validation.
(AGG)	 AT	61901-61953	GT	AAG
(GAC)	 AG	63671-63793	GT	GAG
(TAT)	 AG	63919-64081	GC	AGG
-recovered pasa_asmbl_47919.p1, terminal, 63919, 64081
-recovered pasa_asmbl_47919.p1, internal, 63671, 63793
-recovered pasa_asmbl_47919.p1, internal, 63919, 64081
Valid prediction for CodingQuarry_transcript_55328-T1
Valid prediction for Augustus_model.g10668.t1
Valid prediction for pasa_asmbl_47547.p1
Valid prediction for HiQ_model.g10671.t1
Valid prediction for GlimmerHMM_glimmerT_15870-T1
Valid prediction for Augustus_model.g10666.t1
Valid prediction for Augustus_model.g10675.t1
Valid prediction for snap_scaffold_6-snap.2940-T1
Valid prediction for GlimmerHMM_glimmerT_15859-T1
Valid prediction for HiQ_model.g10650.t1
Valid prediction for GlimmerHMM_glimmerT_15873-T1
Valid prediction for Augustus_model.g10670.t1
Couldn't classify 161522, 161572
Couldn't classify 162652, 162687
Sorry, prediction pasa_asmbl_47569.p1 fails validation.
(GCC)	 AC	161522-161572	GT	AGG
(GTG)	 AG	161837-161980	GT	TGG
(GCT)	 AG	162274-162390	GT	AGG
(CTG)	 AG	162652-162687	CA	GAC
-recovered pasa_asmbl_47569.p1, internal, 161837, 161980
-recovered pasa_asmbl_47569.p1, internal, 162274, 162390
Valid prediction for GlimmerHMM_glimmerT_15865-T1
Valid prediction for Augustus_model.g10654.t1
Valid prediction for GlimmerHMM_glimmerT_15876-T1
Valid prediction for GlimmerHMM_glimmerT_15858-T1
Valid prediction for GlimmerHMM_glimmerT_15854-T1
Couldn't classify 18822, 19271
Sorry, prediction pasa_asmbl_47546.p1 fails validation.
(GCT)	 CT	18822-19271	GG	GTG
Couldn't classify 159441, 159888
Couldn't classify 160986, 161126
Sorry, prediction pasa_asmbl_47568.p1 fails validation.
(AAC)	 CA	159441-159888	GT	GGG
(GTC)	 AG	160106-160267	GT	TGG
(TCT)	 AG	160478-160665	GT	AGG
(GGT)	 AG	160826-160888	GT	TGG
(GGC)	 AG	160986-161126	AT	ACA
-recovered pasa_asmbl_47568.p1, internal, 160106, 160267
-recovered pasa_asmbl_47568.p1, internal, 160478, 160665
-recovered pasa_asmbl_47568.p1, internal, 160826, 160888
Valid prediction for snap_scaffold_6-snap.2911-T1
Valid prediction for Augustus_model.g10665.t1
Valid prediction for GlimmerHMM_glimmerT_15868-T1
Valid prediction for GlimmerHMM_glimmerT_15864-T1
Valid prediction for snap_scaffold_6-snap.2927-T1
Valid prediction for Augustus_model.g10660.t1
Valid prediction for snap_scaffold_6-snap.2903-T1
Valid prediction for Augustus_model.g10673.t1
Valid prediction for snap_scaffold_6-snap.2938-T1
Valid prediction for Augustus_model.g10656.t1
Valid prediction for snap_scaffold_6-snap.2929-T1
Valid prediction for snap_scaffold_6-snap.2912-T1
Couldn't classify 104552, 104625
Couldn't classify 105346, 105423
Sorry, prediction pasa_asmbl_47933.p1 fails validation.
(GAG)	 TG	104552-104625	GT	AGG
(GTT)	 AG	104791-104962	GT	AGG
(ATT)	 AG	105346-105423	AG	AGA
-recovered pasa_asmbl_47933.p1, internal, 104791, 104962
Valid prediction for snap_scaffold_6-snap.2906-T1
Valid prediction for GlimmerHMM_glimmerT_15872-T1
Valid prediction for snap_scaffold_6-snap.2917-T1
Couldn't classify 158169, 159125
Sorry, prediction pasa_asmbl_47567.p1 fails validation.
(CAG)	 CT	158169-159125	GA	AGG
Valid prediction for snap_scaffold_6-snap.2943-T1
Valid prediction for snap_scaffold_6-snap.2931-T1
Valid prediction for GlimmerHMM_glimmerT_15855-T1
Valid prediction for pasa_asmbl_47555.p1
Valid prediction for GlimmerHMM_glimmerT_15856-T1
Valid prediction for Augustus_model.g10649.t1
Couldn't classify 193297, 193316
Couldn't classify 193655, 194090
Sorry, prediction pasa_asmbl_47578.p1 fails validation.
(TTG)	 TT	193297-193316	GT	TGG
(GGC)	 AG	193655-194090	CT	GGC
Valid prediction for snap_scaffold_6-snap.2926-T1
Valid prediction for GlimmerHMM_glimmerT_15880-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_15853-T1
Valid prediction for snap_scaffold_6-snap.2905-T1
Valid prediction for pasa_asmbl_48954.p2
Valid prediction for GlimmerHMM_glimmerT_15860-T1
Valid prediction for CodingQuarry_transcript_55325-T1
Valid prediction for GlimmerHMM_glimmerT_15861-T1
Valid prediction for snap_scaffold_6-snap.2925-T1
Valid prediction for pasa_asmbl_48970.p1
Valid prediction for snap_scaffold_6-snap.2902-T1
Valid prediction for pasa_asmbl_48981.p1
Valid prediction for CodingQuarry_transcript_55317-T1
Couldn't classify 138392, 138486
Sorry, prediction pasa_asmbl_48976.p1 fails validation.
(GTG)	 GC	138392-138486	GT	CCG
(GCA)	 AG	138557-138640	GT	AGG
(TAA)	 AG	138775-138916	GT	AGG
(CCT)	 AG	139014-139154	GT	AGG
(ATG)	 AG	139410-139554	GC	TGG
(GCT)	 AG	139700-139900	GT	TGG
(GTA)	 AG	140106-140246	GT	AGG
(GAT)	 AG	140486-140671	GT	CGG
(ATT)	 AG	140787-140893	GT	AGG
(GTG)	 AG	141002-141178	AA	GAA
-recovered pasa_asmbl_48976.p1, initial, 139410, 139554
-recovered pasa_asmbl_48976.p1, terminal, 141002, 141178
-recovered pasa_asmbl_48976.p1, internal, 138557, 138640
-recovered pasa_asmbl_48976.p1, internal, 138775, 138916
-recovered pasa_asmbl_48976.p1, internal, 139014, 139154
-recovered pasa_asmbl_48976.p1, internal, 139410, 139554
-recovered pasa_asmbl_48976.p1, internal, 139700, 139900
-recovered pasa_asmbl_48976.p1, internal, 140106, 140246
-recovered pasa_asmbl_48976.p1, internal, 140486, 140671
-recovered pasa_asmbl_48976.p1, internal, 140787, 140893
Valid prediction for pasa_asmbl_48963.p1
Valid prediction for snap_scaffold_6-snap.2913-T1
Valid prediction for GlimmerHMM_glimmerT_15857-T1
Valid prediction for snap_scaffold_6-snap.2920-T1
Valid prediction for snap_scaffold_6-snap.2915-T1
Valid prediction for snap_scaffold_6-snap.2935-T1
Valid prediction for CodingQuarry_transcript_55323-T1
Valid prediction for HiQ_model.g10662.t1
Valid prediction for GlimmerHMM_glimmerT_15866-T1
Valid prediction for Augustus_model.g10647.t1
Valid prediction for GlimmerHMM_glimmerT_15867-T1
Valid prediction for snap_scaffold_6-snap.2909-T1
Couldn't classify 121425, 121721
Sorry, prediction pasa_asmbl_49365.p1 fails validation.
(GAG)	 TT	121425-121721	AG	AGA
Valid prediction for GlimmerHMM_glimmerT_15849-T1
Valid prediction for snap_scaffold_6-snap.2923-T1
Valid prediction for GlimmerHMM_glimmerT_15869-T1
Valid prediction for pasa_asmbl_48977.p1
Valid prediction for snap_scaffold_6-snap.2919-T1
Valid prediction for HiQ_model.g10655.t1
Valid prediction for snap_scaffold_6-snap.2942-T1
Valid prediction for snap_scaffold_6-snap.2918-T1
Valid prediction for snap_scaffold_6-snap.2944-T1
Valid prediction for CodingQuarry_transcript_55324-T1
Valid prediction for HiQ_model.g10648.t1
Valid prediction for CodingQuarry_transcript_55327-T1
Valid prediction for Augustus_model.g10651.t1
Valid prediction for GlimmerHMM_glimmerT_15875-T1
Valid prediction for HiQ_model.g10658.t1
Valid prediction for snap_scaffold_6-snap.2921-T1
Valid prediction for snap_scaffold_6-snap.2916-T1
Valid prediction for Augustus_model.g10657.t1
Valid prediction for snap_scaffold_6-snap.2914-T1
Valid prediction for GlimmerHMM_glimmerT_15863-T1
Valid prediction for snap_scaffold_6-snap.2933-T1
Valid prediction for GlimmerHMM_glimmerT_15862-T1
Valid prediction for Augustus_model.g10663.t1
Valid prediction for CodingQuarry_transcript_55318-T1
Valid prediction for snap_scaffold_6-snap.2932-T1
Valid prediction for Augustus_model.g10659.t1
Valid prediction for GlimmerHMM_glimmerT_15850-T1
Valid prediction for Augustus_model.g10661.t1
Couldn't classify 122712, 123614
Sorry, prediction pasa_asmbl_48980.p1 fails validation.
(ATC)	 AT	122712-123614	AC	AAA
Valid prediction for snap_scaffold_6-snap.2901-T1
Valid prediction for snap_scaffold_6-snap.2928-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 134392, rend_intergenic: 130603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157878, rend_intergenic: 156333  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161677, rend_intergenic: 157971  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188781, rend_intergenic: 181212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227954, rend_intergenic: 224820  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232296, rend_intergenic: 230134  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 234725
-exon list size: 543


building trellis

0.2    
0.4    
0.6    
0.7    
0.9    
1.1    
1.3    
1.5    
1.7    
1.8    
2.0    
2.2    
2.4    
2.6    
2.8    
2.9    
3.1    
3.3    
3.5    
3.7    
3.9    
4.0    
4.2    
4.4    
4.6    
4.8    
5.0    
5.1    
5.3    
5.5    
5.7    
5.9    
6.1    
6.2    
6.4    
6.6    
6.8    
7.0    
7.2    
7.3    
7.5    
7.7    
7.9    
8.1    
8.3    
8.4    
8.6    
8.8    
9.0    
9.2    
9.4    
9.5    
9.7    
9.9    
10.1    
10.3    
10.5    
10.6    
10.8    
11.0    
11.2    
11.4    
11.6    
11.7    
11.9    
12.1    
12.3    
12.5    
12.7    
12.8    
13.0    
13.2    
13.4    
13.6    
13.8    
13.9    
14.1    
14.3    
14.5    
14.7    
14.9    
15.0    
15.2    
15.4    
15.6    
15.8    
16.0    
16.1    
16.3    
16.5    
16.7    
16.9    
17.1    
17.2    
17.4    
17.6    
17.8    
18.0    
18.2    
18.3    
18.5    
18.7    
18.9    
19.1    
19.3    
19.4    
19.6    
19.8    
20.0    
20.2    
20.4    
20.6    
20.7    
20.9    
21.1    
21.3    
21.5    
21.7    
21.8    
22.0    
22.2    
22.4    
22.6    
22.8    
22.9    
23.1    
23.3    
23.5    
23.7    
23.9    
24.0    
24.2    
24.4    
24.6    
24.8    
25.0    
25.1    
25.3    
25.5    
25.7    
25.9    
26.1    
26.2    
26.4    
26.6    
26.8    
27.0    
27.2    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.4    
28.6    
28.8    
29.0    
29.2    
29.4    
29.5    
29.7    
29.9    
30.1    
30.3    
30.5    
30.6    
30.8    
31.0    
31.2    
31.4    
31.6    
31.7    
31.9    
32.1    
32.3    
32.5    
32.7    
32.8    
33.0    
33.2    
33.4    
33.6    
33.8    
33.9    
34.1    
34.3    
34.5    
34.7    
34.9    
35.0    
35.2    
35.4    
35.6    
35.8    
36.0    
36.1    
36.3    
36.5    
36.7    
36.9    
37.1    
37.2    
37.4    
37.6    
37.8    
38.0    
38.2    
38.3    
38.5    
38.7    
38.9    
39.1    
39.3    
39.4    
39.6    
39.8    
40.0    
40.2    
40.4    
40.6    
40.7    
40.9    
41.1    
41.3    
41.5    
41.7    
41.8    
42.0    
42.2    
42.4    
42.6    
42.8    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.0    
44.2    
44.4    
44.6    
44.8    
45.0    
45.1    
45.3    
45.5    
45.7    
45.9    
46.1    
46.2    
46.4    
46.6    
46.8    
47.0    
47.2    
47.3    
47.5    
47.7    
47.9    
48.1    
48.3    
48.4    
48.6    
48.8    
49.0    
49.2    
49.4    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.6    
50.8    
51.0    
51.2    
51.4    
51.6    
51.7    
51.9    
52.1    
52.3    
52.5    
52.7    
52.8    
53.0    
53.2    
53.4    
53.6    
53.8    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.0    
55.2    
55.4    
55.6    
55.8    
56.0    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.2    
57.4    
57.6    
57.8    
58.0    
58.2    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.4    
59.6    
59.8    
60.0    
60.2    
60.4    
60.6    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.8    
62.0    
62.2    
62.4    
62.6    
62.8    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.6    
64.8    
65.0    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.4    
68.6    
68.8    
69.0    
69.2    
69.4    
69.5    
69.7    
69.9    
70.1    
70.3    
70.5    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.8    
73.0    
73.2    
73.4    
73.6    
73.8    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.6    
75.8    
76.0    
76.1    
76.3    
76.5    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.3    
78.5    
78.7    
78.9    
79.1    
79.3    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.6    
80.7    
80.9    
81.1    
81.3    
81.5    
81.7    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.1    
85.3    
85.5    
85.7    
85.9    
86.1    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.3    
87.5    
87.7    
87.9    
88.1    
88.3    
88.4    
88.6    
88.8    
89.0    
89.2    
89.4    
89.5    
89.7    
89.9    
90.1    
90.3    
90.5    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.7    
91.9    
92.1    
92.3    
92.5    
92.7    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.0    
95.2    
95.4    
95.6    
95.8    
96.0    
96.1    
96.3    
96.5    
96.7    
96.9    
97.1    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.3    
98.5    
98.7    
98.9    
99.1    
99.3    
99.4    
99.6    
99.8    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 134392, rend_intergenic: 130603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157878, rend_intergenic: 156333  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161677, rend_intergenic: 157971  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188781, rend_intergenic: 181212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227954, rend_intergenic: 224820  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232296, rend_intergenic: 230134  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 34 predictions persist after filtering for low support