-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_6/scaffold_6_1108888-1314454 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_6-snap.289-T1 Valid prediction for GlimmerHMM_glimmerT_14029-T1 Valid prediction for snap_scaffold_6-snap.258-T1 Valid prediction for Augustus_model.g9315.t1 Valid prediction for Augustus_model.g9316.t1 Valid prediction for Augustus_model.g9317.t1 Valid prediction for GlimmerHMM_glimmerT_14010-T1 Valid prediction for snap_scaffold_6-snap.286-T1 Valid prediction for snap_scaffold_6-snap.276-T1 Valid prediction for GlimmerHMM_glimmerT_14011-T1 Valid prediction for GlimmerHMM_glimmerT_14014-T1 Couldn't classify 5537, 5671 Couldn't classify 8065, 8176 Sorry, prediction pasa_asmbl_46688.p1 fails validation. (CGT) GG 5537-5671 GT AGG (GGC) AG 6537-6629 GT AGG (GAG) AG 7721-7827 GT AGG (CCT) AG 8065-8176 CG GGC -recovered pasa_asmbl_46688.p1, internal, 6537, 6629 -recovered pasa_asmbl_46688.p1, internal, 7721, 7827 Valid prediction for GlimmerHMM_glimmerT_14030-T1 Valid prediction for snap_scaffold_6-snap.287-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for snap_scaffold_6-snap.253-T1 Valid prediction for snap_scaffold_6-snap.266-T1 Couldn't classify 178593, 178709 Sorry, prediction pasa_asmbl_46694.p1 fails validation. (GCC) AT 178593-178709 GT TGG (AAC) AG 179141-179290 GT AGG (ATC) AG 179518-179615 GT AGG (CCG) AG 180216-180384 GT AGG (AGC) AG 180476-180559 GT AGG (GCT) AG 180833-180912 GT ACG (GCT) AG 181102-181179 GT CTG (GGT) AG 181906-182008 GT AGG (GTC) AG 182314-182490 GT TGG (TTA) AG 183015-183140 GT TGG (GAC) AG 183506-183619 GT AGG (GAC) AG 184104-184202 GT AGG (TTC) AG 184604-184729 GT AGG (TGT) AG 185091-185201 GG GAG -recovered pasa_asmbl_46694.p1, terminal, 185091, 185201 -recovered pasa_asmbl_46694.p1, internal, 179141, 179290 -recovered pasa_asmbl_46694.p1, internal, 179518, 179615 -recovered pasa_asmbl_46694.p1, internal, 180216, 180384 -recovered pasa_asmbl_46694.p1, internal, 180476, 180559 -recovered pasa_asmbl_46694.p1, internal, 180833, 180912 -recovered pasa_asmbl_46694.p1, internal, 181102, 181179 -recovered pasa_asmbl_46694.p1, internal, 181906, 182008 -recovered pasa_asmbl_46694.p1, internal, 182314, 182490 -recovered pasa_asmbl_46694.p1, internal, 183015, 183140 -recovered pasa_asmbl_46694.p1, internal, 183506, 183619 -recovered pasa_asmbl_46694.p1, internal, 184104, 184202 -recovered pasa_asmbl_46694.p1, internal, 184604, 184729 Valid prediction for snap_scaffold_6-snap.261-T1 Valid prediction for snap_scaffold_6-snap.263-T1 Valid prediction for GlimmerHMM_glimmerT_14007-T1 Couldn't classify 8486, 8651 Couldn't classify 10116, 10198 Sorry, prediction pasa_asmbl_47971.p1 fails validation. (GTG) AG 8486-8651 GT TGG (ATG) AG 8854-9072 GT CCG (GGG) AG 9317-9490 GT CTG (CTT) AG 10116-10198 AC ACA add_exon() Sorry, pasa_asmbl_47971.p1 8854-9072-initial-1 is invalid. -recovered pasa_asmbl_47971.p1, initial, 8854, 9072 -recovered pasa_asmbl_47971.p1, internal, 8486, 8651 -recovered pasa_asmbl_47971.p1, internal, 8854, 9072 -recovered pasa_asmbl_47971.p1, internal, 9317, 9490 Valid prediction for GlimmerHMM_glimmerT_14027-T1 Valid prediction for snap_scaffold_6-snap.257-T1 Valid prediction for snap_scaffold_6-snap.272-T1 Valid prediction for GlimmerHMM_glimmerT_14013-T1 Valid prediction for GlimmerHMM_glimmerT_14015-T1 Valid prediction for snap_scaffold_6-snap.269-T1 Valid prediction for Augustus_model.g9308.t1 Valid prediction for snap_scaffold_6-snap.271-T1 Valid prediction for GlimmerHMM_glimmerT_14028-T1 Valid prediction for GlimmerHMM_glimmerT_14031-T1 Valid prediction for snap_scaffold_6-snap.288-T1 Valid prediction for Augustus_model.g9318.t1 Couldn't classify 87172, 87309 Couldn't classify 87561, 87665 Sorry, prediction pasa_asmbl_46692.p1 fails validation. (ATG) GG 81558-81616 GT AAG (GAG) AG 83219-83337 GT GAG (ACT) AG 83787-83941 GT TGG (GCA) AG 84360-84533 GT ACG (GTG) AG 84984-85106 GT GGG (GTG) AG 85746-86030 GT TGG (GCC) AG 86748-86801 GT ACG (GTA) AG 87172-87309 AT AGA (TTT) AC 87561-87665 GT AGG (AAC) AG 87792-88062 GT GGG (GAA) AG 88235-89004 GT AGG (GTC) AG 89273-89758 GA AAG -recovered pasa_asmbl_46692.p1, initial, 81558, 81616 -recovered pasa_asmbl_46692.p1, terminal, 89273, 89758 -recovered pasa_asmbl_46692.p1, internal, 83219, 83337 -recovered pasa_asmbl_46692.p1, internal, 83787, 83941 -recovered pasa_asmbl_46692.p1, internal, 84360, 84533 -recovered pasa_asmbl_46692.p1, internal, 84984, 85106 -recovered pasa_asmbl_46692.p1, internal, 85746, 86030 -recovered pasa_asmbl_46692.p1, internal, 86748, 86801 -recovered pasa_asmbl_46692.p1, internal, 87792, 88062 -recovered pasa_asmbl_46692.p1, internal, 88235, 89004 Valid prediction for snap_scaffold_6-snap.285-T1 Valid prediction for GlimmerHMM_glimmerT_14009-T1 Valid prediction for GlimmerHMM_glimmerT_14016-T1 Couldn't classify 87172, 87309 Couldn't classify 87561, 87665 Sorry, prediction CodingQuarry_transcript_54914-T1 fails validation. (ATG) GG 81558-81616 GT AAG (GAG) AG 83219-83337 GT GAG (ACT) AG 83787-83941 GT TGG (GCA) AG 84360-84533 GT ACG (GTG) AG 84984-85106 GT GGG (GTG) AG 85746-86030 GT TGG (GCC) AG 86748-86801 GT ACG (GTA) AG 87172-87309 AT AGA (TTT) AC 87561-87665 GT AGG (AAC) AG 87792-88062 GT GGG (GAA) AG 88235-89004 GT AGG (GTC) AG 89273-89758 GA AAG -recovered CodingQuarry_transcript_54914-T1, initial, 81558, 81616 -recovered CodingQuarry_transcript_54914-T1, terminal, 89273, 89758 -recovered CodingQuarry_transcript_54914-T1, internal, 83219, 83337 -recovered CodingQuarry_transcript_54914-T1, internal, 83787, 83941 -recovered CodingQuarry_transcript_54914-T1, internal, 84360, 84533 -recovered CodingQuarry_transcript_54914-T1, internal, 84984, 85106 -recovered CodingQuarry_transcript_54914-T1, internal, 85746, 86030 -recovered CodingQuarry_transcript_54914-T1, internal, 86748, 86801 -recovered CodingQuarry_transcript_54914-T1, internal, 87792, 88062 -recovered CodingQuarry_transcript_54914-T1, internal, 88235, 89004 Valid prediction for Augustus_model.g9306.t1 Valid prediction for snap_scaffold_6-snap.273-T1 Valid prediction for Augustus_model.g9304.t1 Valid prediction for GlimmerHMM_glimmerT_14017-T1 Valid prediction for Augustus_model.g9300.t1 Valid prediction for Augustus_model.g9305.t1 Couldn't classify 10457, 10584 Couldn't classify 11992, 12061 Sorry, prediction pasa_asmbl_46689.p1 fails validation. (CAA) AG 10457-10584 GT AGG (CTG) AG 11063-11278 GT AGG (GTC) AG 11992-12061 TC CCT -recovered pasa_asmbl_46689.p1, internal, 10457, 10584 -recovered pasa_asmbl_46689.p1, internal, 11063, 11278 Valid prediction for GlimmerHMM_glimmerT_14026-T1 Valid prediction for snap_scaffold_6-snap.256-T1 Couldn't classify 171334, 171460 Couldn't classify 174722, 174914 Sorry, prediction pasa_asmbl_46693.p1 fails validation. (CTG) GG 171334-171460 GT TGG (ACA) AG 171735-171823 GT TGG (GCA) AG 172425-172668 GT AGG (GTA) AG 173205-173297 GT AGG (GAT) AG 174062-174293 GT GGG (GTG) AG 174722-174914 GG AAG -recovered pasa_asmbl_46693.p1, terminal, 173205, 173297 -recovered pasa_asmbl_46693.p1, internal, 171735, 171823 -recovered pasa_asmbl_46693.p1, internal, 172425, 172668 -recovered pasa_asmbl_46693.p1, internal, 173205, 173297 -recovered pasa_asmbl_46693.p1, internal, 174062, 174293 Valid prediction for snap_scaffold_6-snap.293-T1 Valid prediction for Augustus_model.g9307.t1 Valid prediction for snap_scaffold_6-snap.259-T1 Valid prediction for CodingQuarry_transcript_54915-T1 Valid prediction for snap_scaffold_6-snap.291-T1 Valid prediction for GlimmerHMM_glimmerT_14008-T1 Valid prediction for GlimmerHMM_glimmerT_14024-T1 Couldn't classify 66996, 67114 Couldn't classify 68206, 68295 Couldn't classify 76851, 77210 Sorry, prediction pasa_asmbl_46691.p1 fails validation. (ATG) CT 64343-64452 GT CTG (TCC) AG 65260-65446 GT AGG (GTG) AG 66389-66526 GT AAG (ACG) AG 66996-67114 AT TCA (ATT) AC 68206-68295 GT GAG (GTA) AG 68546-68674 GT GCG (GTA) AG 70696-70787 GT TGG (GTC) AG 72154-72378 GT CGG (TGA) AG 73164-73227 GT GGG (GAA) AG 73578-73719 GT TTG (ACT) AG 74583-74786 GT AGG (CAG) AG 75086-75164 GT TGG (ACT) AG 75929-76167 GT TGG (GTG) AG 76529-76702 GT TGG (ATG) AG 76851-77210 AG TGA -recovered pasa_asmbl_46691.p1, initial, 64343, 64452 -recovered pasa_asmbl_46691.p1, internal, 65260, 65446 -recovered pasa_asmbl_46691.p1, internal, 66389, 66526 -recovered pasa_asmbl_46691.p1, internal, 68546, 68674 -recovered pasa_asmbl_46691.p1, internal, 70696, 70787 -recovered pasa_asmbl_46691.p1, internal, 72154, 72378 -recovered pasa_asmbl_46691.p1, internal, 73164, 73227 -recovered pasa_asmbl_46691.p1, internal, 73578, 73719 -recovered pasa_asmbl_46691.p1, internal, 74583, 74786 -recovered pasa_asmbl_46691.p1, internal, 75086, 75164 -recovered pasa_asmbl_46691.p1, internal, 75929, 76167 -recovered pasa_asmbl_46691.p1, internal, 76529, 76702 Valid prediction for snap_scaffold_6-snap.267-T1 Valid prediction for HiQ_model.g9303.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_6-snap.255-T1 Valid prediction for snap_scaffold_6-snap.262-T1 Valid prediction for snap_scaffold_6-snap.265-T1 Valid prediction for snap_scaffold_6-snap.274-T1 Valid prediction for Augustus_model.g9302.t1 Valid prediction for snap_scaffold_6-snap.277-T1 Valid prediction for snap_scaffold_6-snap.282-T1 Valid prediction for GlimmerHMM_glimmerT_14005-T1 Valid prediction for GlimmerHMM_glimmerT_14004-T1 Valid prediction for snap_scaffold_6-snap.283-T1 Valid prediction for snap_scaffold_6-snap.292-T1 Valid prediction for snap_scaffold_6-snap.278-T1 Valid prediction for Augustus_model.g9301.t1 Valid prediction for GlimmerHMM_glimmerT_14006-T1 Valid prediction for Augustus_model.g9310.t1 Valid prediction for GlimmerHMM_glimmerT_14019-T1 Valid prediction for GlimmerHMM_glimmerT_14021-T1 Valid prediction for snap_scaffold_6-snap.260-T1 Valid prediction for snap_scaffold_6-snap.254-T1 Valid prediction for snap_scaffold_6-snap.284-T1 Valid prediction for Augustus_model.g9311.t1 Valid prediction for GlimmerHMM_glimmerT_14018-T1 Couldn't classify 187317, 187418 Sorry, prediction pasa_asmbl_48093.p1 fails validation. (GGT) GA 187317-187418 GT AGG (ATT) AG 187887-188102 TT GAT -recovered pasa_asmbl_48093.p1, terminal, 187887, 188102 Valid prediction for snap_scaffold_6-snap.281-T1 Valid prediction for Augustus_model.g9312.t1 Valid prediction for snap_scaffold_6-snap.279-T1 Valid prediction for snap_scaffold_6-snap.295-T1 Valid prediction for snap_scaffold_6-snap.252-T1 Valid prediction for GlimmerHMM_glimmerT_14012-T1 Valid prediction for snap_scaffold_6-snap.270-T1 Valid prediction for GlimmerHMM_glimmerT_14025-T1 Valid prediction for snap_scaffold_6-snap.294-T1 Valid prediction for GlimmerHMM_glimmerT_14022-T1 Valid prediction for snap_scaffold_6-snap.264-T1 Valid prediction for snap_scaffold_6-snap.268-T1 Valid prediction for GlimmerHMM_glimmerT_14023-T1 Valid prediction for Augustus_model.g9309.t1 Valid prediction for Augustus_model.g9313.t1 Valid prediction for snap_scaffold_6-snap.275-T1 Valid prediction for snap_scaffold_6-snap.280-T1 Valid prediction for snap_scaffold_6-snap.290-T1 Valid prediction for GlimmerHMM_glimmerT_14020-T1 Valid prediction for Augustus_model.g9314.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8629, rend_intergenic: 7155 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13849, rend_intergenic: 8876 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 36264, rend_intergenic: 17568 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45477, rend_intergenic: 37611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50562, rend_intergenic: 45701 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61501, rend_intergenic: 53044 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64489, rend_intergenic: 62044 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77216, rend_intergenic: 65267 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87327, rend_intergenic: 84488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104932, rend_intergenic: 103196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111581, rend_intergenic: 106198 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178768, rend_intergenic: 155606 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185201, rend_intergenic: 179443 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192524, rend_intergenic: 188356 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195200, rend_intergenic: 193312 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203688, rend_intergenic: 195289 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 81731, rend_intergenic: 81728 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 205567 -exon list size: 430 building trellis 0.2 0.5 0.7 0.9 1.2 1.4 1.6 1.9 2.1 2.3 2.5 2.8 3.0 3.2 3.5 3.7 3.9 4.2 4.4 4.6 4.9 5.1 5.3 5.6 5.8 6.0 6.2 6.5 6.7 6.9 7.2 7.4 7.6 7.9 8.1 8.3 8.6 8.8 9.0 9.3 9.5 9.7 10.0 10.2 10.4 10.6 10.9 11.1 11.3 11.6 11.8 12.0 12.3 12.5 12.7 13.0 13.2 13.4 13.7 13.9 14.1 14.4 14.6 14.8 15.0 15.3 15.5 15.7 16.0 16.2 16.4 16.7 16.9 17.1 17.4 17.6 17.8 18.1 18.3 18.5 18.8 19.0 19.2 19.4 19.7 19.9 20.1 20.4 20.6 20.8 21.1 21.3 21.5 21.8 22.0 22.2 22.5 22.7 22.9 23.1 23.4 23.6 23.8 24.1 24.3 24.5 24.8 25.0 25.2 25.5 25.7 25.9 26.2 26.4 26.6 26.9 27.1 27.3 27.5 27.8 28.0 28.2 28.5 28.7 28.9 29.2 29.4 29.6 29.9 30.1 30.3 30.6 30.8 31.0 31.2 31.5 31.7 31.9 32.2 32.4 32.6 32.9 33.1 33.3 33.6 33.8 34.0 34.3 34.5 34.7 35.0 35.2 35.4 35.6 35.9 36.1 36.3 36.6 36.8 37.0 37.3 37.5 37.7 38.0 38.2 38.4 38.7 38.9 39.1 39.4 39.6 39.8 40.0 40.3 40.5 40.7 41.0 41.2 41.4 41.7 41.9 42.1 42.4 42.6 42.8 43.1 43.3 43.5 43.8 44.0 44.2 44.4 44.7 44.9 45.1 45.4 45.6 45.8 46.1 46.3 46.5 46.8 47.0 47.2 47.5 47.7 47.9 48.1 48.4 48.6 48.8 49.1 49.3 49.5 49.8 50.0 50.2 50.5 50.7 50.9 51.2 51.4 51.6 51.9 52.1 52.3 52.5 52.8 53.0 53.2 53.5 53.7 53.9 54.2 54.4 54.6 54.9 55.1 55.3 55.6 55.8 56.0 56.2 56.5 56.7 56.9 57.2 57.4 57.6 57.9 58.1 58.3 58.6 58.8 59.0 59.3 59.5 59.7 60.0 60.2 60.4 60.6 60.9 61.1 61.3 61.6 61.8 62.0 62.3 62.5 62.7 63.0 63.2 63.4 63.7 63.9 64.1 64.4 64.6 64.8 65.0 65.3 65.5 65.7 66.0 66.2 66.4 66.7 66.9 67.1 67.4 67.6 67.8 68.1 68.3 68.5 68.8 69.0 69.2 69.4 69.7 69.9 70.1 70.4 70.6 70.8 71.1 71.3 71.5 71.8 72.0 72.2 72.5 72.7 72.9 73.1 73.4 73.6 73.8 74.1 74.3 74.5 74.8 75.0 75.2 75.5 75.7 75.9 76.2 76.4 76.6 76.9 77.1 77.3 77.5 77.8 78.0 78.2 78.5 78.7 78.9 79.2 79.4 79.6 79.9 80.1 80.3 80.6 80.8 81.0 81.2 81.5 81.7 81.9 82.2 82.4 82.6 82.9 83.1 83.3 83.6 83.8 84.0 84.3 84.5 84.7 85.0 85.2 85.4 85.6 85.9 86.1 86.3 86.6 86.8 87.0 87.3 87.5 87.7 88.0 88.2 88.4 88.7 88.9 89.1 89.4 89.6 89.8 90.0 90.3 90.5 90.7 91.0 91.2 91.4 91.7 91.9 92.1 92.4 92.6 92.8 93.1 93.3 93.5 93.8 94.0 94.2 94.4 94.7 94.9 95.1 95.4 95.6 95.8 96.1 96.3 96.5 96.8 97.0 97.2 97.5 97.7 97.9 98.1 98.4 98.6 98.8 99.1 99.3 99.5 99.8 -found 26 predictions from path traversal Error with prediction: snap lend_intergenic: 8629, rend_intergenic: 7155 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13849, rend_intergenic: 8876 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 36264, rend_intergenic: 17568 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45477, rend_intergenic: 37611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50562, rend_intergenic: 45701 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61501, rend_intergenic: 53044 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64489, rend_intergenic: 62044 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77216, rend_intergenic: 65267 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87327, rend_intergenic: 84488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104932, rend_intergenic: 103196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111581, rend_intergenic: 106198 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178768, rend_intergenic: 155606 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185201, rend_intergenic: 179443 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192524, rend_intergenic: 188356 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195200, rend_intergenic: 193312 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203688, rend_intergenic: 195289 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 81731, rend_intergenic: 81728 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 21 predictions persist after filtering for low support