-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_597

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 257, 382
Couldn't classify 5393, 5483
Sorry, prediction snap_scaffold_597-snap.2-T1 fails validation.
(TAG)	 AG	257-382	GT	TAG
(GGT)	 AG	857-1008	GT	AGG
(CTG)	 AG	3596-3811	GT	GCG
(CTT)	 AG	4311-4428	GT	CGG
(ACC)	 AG	5393-5483	GT	GGG
-recovered snap_scaffold_597-snap.2-T1, internal, 257, 382
-recovered snap_scaffold_597-snap.2-T1, internal, 857, 1008
-recovered snap_scaffold_597-snap.2-T1, internal, 3596, 3811
-recovered snap_scaffold_597-snap.2-T1, internal, 4311, 4428
-recovered snap_scaffold_597-snap.2-T1, internal, 5393, 5483
Couldn't classify 257, 382
Sorry, prediction Augustus_model.g40073.t1 fails validation.
(TAG)	 AG	257-382	GT	TAG
(GGT)	 AG	857-1008	GT	AGG
(CTG)	 AG	3596-3811	GT	GCG
(GCC)	 AG	4385-4432	CT	GAC
-recovered Augustus_model.g40073.t1, terminal, 4385, 4432
-recovered Augustus_model.g40073.t1, internal, 257, 382
-recovered Augustus_model.g40073.t1, internal, 857, 1008
-recovered Augustus_model.g40073.t1, internal, 3596, 3811

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 792, 917
Couldn't classify 5172, 5388
Sorry, prediction snap_scaffold_597-snap.1-T1 fails validation.
(GTA)	 AG	792-917	GT	ATG
(GCG)	 AG	1744-1814	GT	CTG
(GAG)	 AG	1824-1922	GT	TGG
(GCC)	 AG	5172-5388	GT	AGG
-recovered snap_scaffold_597-snap.1-T1, internal, 792, 917
-recovered snap_scaffold_597-snap.1-T1, internal, 1744, 1814
-recovered snap_scaffold_597-snap.1-T1, internal, 1824, 1922
-recovered snap_scaffold_597-snap.1-T1, internal, 5172, 5388
Sorry, intron length (8) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4738, rend_intergenic: 257  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 5529
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 4738, rend_intergenic: 257  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support