-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_567

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_60497-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1395, 1420
Sorry, prediction snap_scaffold_567-snap.1-T1 fails validation.
(AGT)	 AG	1395-1420	GT	AGG
(AAA)	 AG	2653-2971	GT	CGG
(TCA)	 AG	4772-4818	GT	AGG
(ACC)	 AG	5292-5444	AA	AAA
-recovered snap_scaffold_567-snap.1-T1, terminal, 5292, 5444
-recovered snap_scaffold_567-snap.1-T1, internal, 1395, 1420
-recovered snap_scaffold_567-snap.1-T1, internal, 2653, 2971
-recovered snap_scaffold_567-snap.1-T1, internal, 4772, 4818
Valid prediction for Augustus_model.g40048.t1
Valid prediction for GlimmerHMM_glimmerT_60496-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 5766
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support