-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_532

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 693, 754
Couldn't classify 3560, 3702
Sorry, prediction snap_scaffold_532-snap.1-T1 fails validation.
(GCT)	 AG	693-754	GT	CGG
(CTC)	 AG	802-905	GT	TGG
(GTC)	 AG	3560-3702	GT	TGG
-recovered snap_scaffold_532-snap.1-T1, internal, 693, 754
-recovered snap_scaffold_532-snap.1-T1, internal, 802, 905
-recovered snap_scaffold_532-snap.1-T1, internal, 3560, 3702

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2389, 2499
Couldn't classify 5226, 5309
Sorry, prediction snap_scaffold_532-snap.2-T1 fails validation.
(TGT)	 AG	2389-2499	GT	GGG
(CGG)	 AG	5226-5309	GT	AGG
-recovered snap_scaffold_532-snap.2-T1, internal, 2389, 2499
-recovered snap_scaffold_532-snap.2-T1, internal, 5226, 5309

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3702, rend_intergenic: 739  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 6047
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 3702, rend_intergenic: 739  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support