-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_511

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_511-snap.1-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 5992, 6299
Sorry, prediction Augustus_model.g40011.t1 fails validation.
(ATG)	 AC	3932-3934	GT	TGG
(TCA)	 AG	4213-4542	GT	AGG
(GGT)	 AG	5753-5871	GT	CGG
(AGT)	 AG	5992-6299		CG
-recovered Augustus_model.g40011.t1, initial, 3932, 3934
-recovered Augustus_model.g40011.t1, internal, 4213, 4542
-recovered Augustus_model.g40011.t1, internal, 5753, 5871
Valid prediction for GlimmerHMM_glimmerT_60442-T1
Couldn't classify 313, 426
Sorry, prediction GlimmerHMM_glimmerT_60443-T1 fails validation.
(TCA)	 AG	313-426	GT	GTG
(TTT)	 AG	3255-3366	GA	GAG
-recovered GlimmerHMM_glimmerT_60443-T1, terminal, 3255, 3366
-recovered GlimmerHMM_glimmerT_60443-T1, internal, 313, 426

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6299
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 2 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support