-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_507 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Couldn't classify 50, 156 Sorry, prediction Augustus_model.g40007.t1 fails validation. (GGT) AG 50-156 GT ATG (TGC) AG 471-611 GT CGG (ACC) AG 1140-1271 GT GGG (GAG) AG 1370-1498 GT AGG (GTT) AG 2009-2137 GT AGG (GTT) AG 3015-3143 GT AGG (AGC) AG 3550-3690 GT CGG (ACT) AG 4147-4226 GT AGG (GAG) AG 4346-4399 CC GAC -recovered Augustus_model.g40007.t1, terminal, 4346, 4399 -recovered Augustus_model.g40007.t1, internal, 50, 156 -recovered Augustus_model.g40007.t1, internal, 471, 611 -recovered Augustus_model.g40007.t1, internal, 1140, 1271 -recovered Augustus_model.g40007.t1, internal, 1370, 1498 -recovered Augustus_model.g40007.t1, internal, 2009, 2137 -recovered Augustus_model.g40007.t1, internal, 3015, 3143 -recovered Augustus_model.g40007.t1, internal, 3550, 3690 -recovered Augustus_model.g40007.t1, internal, 4147, 4226 Couldn't classify 6164, 6279 Sorry, prediction Augustus_model.g40008.t1 fails validation. (ATG) CG 4891-4920 GT GGG (GAC) AG 6164-6279 GT CGG -recovered Augustus_model.g40008.t1, initial, 4891, 4920 -recovered Augustus_model.g40008.t1, internal, 6164, 6279 Valid prediction for GlimmerHMM_glimmerT_60437-T1 Couldn't classify 6164, 6279 Sorry, prediction GlimmerHMM_glimmerT_60438-T1 fails validation. (ATG) CG 4891-4920 GT GGG (GAC) AG 6164-6279 GT CGG -recovered GlimmerHMM_glimmerT_60438-T1, initial, 4891, 4920 -recovered GlimmerHMM_glimmerT_60438-T1, internal, 6164, 6279 Valid prediction for snap_scaffold_507-snap.2-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 6166, 6320 Sorry, prediction snap_scaffold_507-snap.1-T1 fails validation. (ATG) AC 2114-2612 GT CGG (TTA) AG 6166-6320 GT CTG -recovered snap_scaffold_507-snap.1-T1, initial, 2114, 2612 -recovered snap_scaffold_507-snap.1-T1, internal, 6166, 6320 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4254, rend_intergenic: 78 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 6367 -exon list size: 17 building trellis 5.3 10.5 15.8 21.1 26.3 31.6 36.8 42.1 47.4 52.6 57.9 63.2 68.4 73.7 78.9 84.2 89.5 94.7 -found 2 predictions from path traversal Error with prediction: snap lend_intergenic: 4254, rend_intergenic: 78 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support