-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_5/scaffold_5_9037628-9339652 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Couldn't classify 117196, 117293 Couldn't classify 118364, 118666 Sorry, prediction pasa_asmbl_45616.p1 fails validation. (GCC) CT 117196-117293 GT AAG (AAT) AG 117477-117553 GT TGG (GGA) AG 117643-117716 GT CAG (CTG) AG 117832-117945 GT AGG (GAG) AG 118046-118183 GT TGG (GTA) AG 118364-118666 CT CCC -recovered pasa_asmbl_45616.p1, internal, 117477, 117553 -recovered pasa_asmbl_45616.p1, internal, 117643, 117716 -recovered pasa_asmbl_45616.p1, internal, 117832, 117945 -recovered pasa_asmbl_45616.p1, internal, 118046, 118183 Valid prediction for snap_scaffold_5-snap.1698-T1 Valid prediction for HiQ_model.g8152.t1 Valid prediction for snap_scaffold_5-snap.1705-T1 Valid prediction for snap_scaffold_5-snap.1717-T1 Valid prediction for Augustus_model.g8158.t1 Valid prediction for Augustus_model.g8161.t1 Valid prediction for GlimmerHMM_glimmerT_12389-T1 Valid prediction for Augustus_model.g8159.t1 Valid prediction for GlimmerHMM_glimmerT_12379-T1 Valid prediction for CodingQuarry_transcript_52167-T1 Valid prediction for GlimmerHMM_glimmerT_12392-T1 Valid prediction for CodingQuarry_transcript_52171-T1 Valid prediction for snap_scaffold_5-snap.1719-T1 Valid prediction for pasa_asmbl_45608.p1 Valid prediction for HiQ_model.g8149.t1 Valid prediction for snap_scaffold_5-snap.1730-T1 Valid prediction for CodingQuarry_transcript_52169-T1 Valid prediction for CodingQuarry_transcript_52170-T1 Valid prediction for snap_scaffold_5-snap.1711-T1 Valid prediction for GlimmerHMM_glimmerT_12377-T1 Valid prediction for snap_scaffold_5-snap.1744-T1 Valid prediction for snap_scaffold_5-snap.1709-T1 Valid prediction for pasa_asmbl_45614.p1 Valid prediction for HiQ_model.g8147.t1 Couldn't classify 122680, 122781 Sorry, prediction pasa_asmbl_45617.p1 fails validation. (ACG) GC 122680-122781 GT GGG (GAC) AG 122899-122981 GT AAG (GCA) AG 123597-123681 GT ACG (ATT) AG 123863-124096 GT TTG (TGG) AG 124272-124365 GT AGG (CCA) AG 124882-124986 GT TGG (CCA) AG 125094-125167 GT AGG (AAC) AG 125302-125394 GT AGG (GAG) AG 125486-125735 GT CAG (CAG) AG 126044-126102 GC GAG -recovered pasa_asmbl_45617.p1, terminal, 126044, 126102 -recovered pasa_asmbl_45617.p1, internal, 122899, 122981 -recovered pasa_asmbl_45617.p1, internal, 123597, 123681 -recovered pasa_asmbl_45617.p1, internal, 123863, 124096 -recovered pasa_asmbl_45617.p1, internal, 124272, 124365 -recovered pasa_asmbl_45617.p1, internal, 124882, 124986 -recovered pasa_asmbl_45617.p1, internal, 125094, 125167 -recovered pasa_asmbl_45617.p1, internal, 125302, 125394 -recovered pasa_asmbl_45617.p1, internal, 125486, 125735 -recovered pasa_asmbl_45617.p1, internal, 126044, 126102 Valid prediction for pasa_asmbl_45613.p1 Valid prediction for snap_scaffold_5-snap.1720-T1 Valid prediction for GlimmerHMM_glimmerT_12396-T1 Valid prediction for snap_scaffold_5-snap.1718-T1 Valid prediction for snap_scaffold_5-snap.1710-T1 Valid prediction for snap_scaffold_5-snap.1729-T1 Valid prediction for snap_scaffold_5-snap.1735-T1 Valid prediction for GlimmerHMM_glimmerT_12388-T1 Valid prediction for Augustus_model.g8165.t1 Valid prediction for snap_scaffold_5-snap.1738-T1 Valid prediction for snap_scaffold_5-snap.1722-T1 Valid prediction for snap_scaffold_5-snap.1736-T1 Valid prediction for GlimmerHMM_glimmerT_12375-T1 Valid prediction for CodingQuarry_transcript_52173-T1 Couldn't classify 43475, 43509 Sorry, prediction pasa_asmbl_45605.p1 fails validation. (TTC) CA 43475-43509 GT AGG (CTG) AG 43942-43992 GT GGG (GCA) AG 44642-44774 GT AGG (GAT) AG 44858-45002 GT TTG (CCC) AG 45131-45212 GT GTG (GGA) AG 45327-45402 GT TAG (GCA) AG 45658-45783 GT AGG (GAA) AG 46342-46388 GT AGG (TCA) AG 47095-47167 GT AGG (GTT) AG 47255-47323 GT ATG (CAA) AG 47407-47475 GT AGG (ATA) AG 47586-47710 GT CTG (CCT) AG 47809-47986 GT AGG (CGG) AG 48079-48264 GT AGG (ATC) AG 48338-48389 GT AGG (CTC) AG 48476-48593 GT AGG (GCT) AG 48770-48865 GT CGG (CAG) AG 48950-49112 CA AGC -recovered pasa_asmbl_45605.p1, terminal, 48950, 49112 -recovered pasa_asmbl_45605.p1, internal, 43942, 43992 -recovered pasa_asmbl_45605.p1, internal, 44642, 44774 -recovered pasa_asmbl_45605.p1, internal, 44858, 45002 -recovered pasa_asmbl_45605.p1, internal, 45131, 45212 -recovered pasa_asmbl_45605.p1, internal, 45327, 45402 -recovered pasa_asmbl_45605.p1, internal, 45658, 45783 -recovered pasa_asmbl_45605.p1, internal, 46342, 46388 -recovered pasa_asmbl_45605.p1, internal, 47095, 47167 -recovered pasa_asmbl_45605.p1, internal, 47255, 47323 -recovered pasa_asmbl_45605.p1, internal, 47407, 47475 -recovered pasa_asmbl_45605.p1, internal, 47586, 47710 -recovered pasa_asmbl_45605.p1, internal, 47809, 47986 -recovered pasa_asmbl_45605.p1, internal, 48079, 48264 -recovered pasa_asmbl_45605.p1, internal, 48338, 48389 -recovered pasa_asmbl_45605.p1, internal, 48476, 48593 -recovered pasa_asmbl_45605.p1, internal, 48770, 48865 Valid prediction for GlimmerHMM_glimmerT_12381-T1 Valid prediction for pasa_asmbl_45595.p1 Valid prediction for snap_scaffold_5-snap.1725-T1 Valid prediction for CodingQuarry_transcript_52168-T1 Valid prediction for HiQ_model.g8151.t1 Valid prediction for GlimmerHMM_glimmerT_12382-T1 Valid prediction for GlimmerHMM_glimmerT_12372-T1 Valid prediction for Augustus_model.g8154.t1 Valid prediction for GlimmerHMM_glimmerT_12380-T1 Valid prediction for GlimmerHMM_glimmerT_12384-T1 Valid prediction for GlimmerHMM_glimmerT_12387-T1 Valid prediction for snap_scaffold_5-snap.1727-T1 Valid prediction for snap_scaffold_5-snap.1707-T1 Valid prediction for Augustus_model.g8157.t1 Valid prediction for GlimmerHMM_glimmerT_12398-T1 Valid prediction for GlimmerHMM_glimmerT_12391-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_5-snap.1715-T1 Couldn't classify 228, 593 Sorry, prediction pasa_asmbl_44277.p1 fails validation. (CGG) GG 228-593 CA GAC Valid prediction for snap_scaffold_5-snap.1739-T1 Valid prediction for GlimmerHMM_glimmerT_12374-T1 Valid prediction for snap_scaffold_5-snap.1740-T1 Valid prediction for Augustus_model.g8145.t1 Valid prediction for Augustus_model.g8146.t1 Valid prediction for GlimmerHMM_glimmerT_12400-T1 Valid prediction for GlimmerHMM_glimmerT_12386-T1 Valid prediction for Augustus_model.g8163.t1 Valid prediction for snap_scaffold_5-snap.1742-T1 Valid prediction for Augustus_model.g8153.t1 Valid prediction for Augustus_model.g8160.t1 Valid prediction for snap_scaffold_5-snap.1732-T1 Valid prediction for GlimmerHMM_glimmerT_12393-T1 Valid prediction for GlimmerHMM_glimmerT_12397-T1 Valid prediction for snap_scaffold_5-snap.1745-T1 Valid prediction for CodingQuarry_transcript_52172-T1 Couldn't classify 5885, 6301 Sorry, prediction pasa_asmbl_44272.p1 fails validation. (ACA) CT 5885-6301 AG GAA Couldn't classify 132460, 132489 Couldn't classify 135679, 135784 Sorry, prediction pasa_asmbl_45030.p1 fails validation. (ACT) AG 132460-132489 GT ATG (CTG) AG 135207-135376 GT TGG (TTT) AG 135679-135784 AC CCA -recovered pasa_asmbl_45030.p1, internal, 132460, 132489 -recovered pasa_asmbl_45030.p1, internal, 135207, 135376 Valid prediction for CodingQuarry_transcript_52174-T1 Valid prediction for snap_scaffold_5-snap.1699-T1 Valid prediction for GlimmerHMM_glimmerT_12383-T1 Valid prediction for snap_scaffold_5-snap.1702-T1 Valid prediction for GlimmerHMM_glimmerT_12390-T1 Valid prediction for Augustus_model.g8166.t1 Couldn't classify 2355, 2456 Couldn't classify 3485, 3580 Sorry, prediction pasa_asmbl_44276.p1 fails validation. (CTG) AC 2355-2456 GT AGG (TTT) AG 2609-2701 GT AGG (CTC) AG 2794-2866 GT GGG (GTG) AG 3248-3339 GT GGG (GGG) AG 3485-3580 AC TCA -recovered pasa_asmbl_44276.p1, internal, 2609, 2701 -recovered pasa_asmbl_44276.p1, internal, 2794, 2866 -recovered pasa_asmbl_44276.p1, internal, 3248, 3339 Valid prediction for snap_scaffold_5-snap.1703-T1 Valid prediction for snap_scaffold_5-snap.1712-T1 Valid prediction for snap_scaffold_5-snap.1713-T1 Valid prediction for GlimmerHMM_glimmerT_12376-T1 Valid prediction for snap_scaffold_5-snap.1741-T1 Valid prediction for Augustus_model.g8155.t1 Valid prediction for snap_scaffold_5-snap.1724-T1 Valid prediction for snap_scaffold_5-snap.1743-T1 Couldn't classify 259139, 259162 Sorry, prediction pasa_asmbl_44263.p2 fails validation. (AAA) CA 259139-259162 GT TGG (AAG) AG 259802-259906 GT TCG (GAG) AG 260079-260203 GT AGG (ATA) AG 260591-260735 AC AAA -recovered pasa_asmbl_44263.p2, terminal, 260591, 260735 -recovered pasa_asmbl_44263.p2, internal, 259802, 259906 -recovered pasa_asmbl_44263.p2, internal, 260079, 260203 Valid prediction for snap_scaffold_5-snap.1716-T1 Valid prediction for snap_scaffold_5-snap.1708-T1 Valid prediction for GlimmerHMM_glimmerT_12378-T1 Valid prediction for GlimmerHMM_glimmerT_12385-T1 Valid prediction for snap_scaffold_5-snap.1706-T1 Valid prediction for snap_scaffold_5-snap.1726-T1 Valid prediction for snap_scaffold_5-snap.1723-T1 Valid prediction for Augustus_model.g8150.t1 Valid prediction for HiQ_model.g8148.t1 Valid prediction for Augustus_model.g8162.t1 Valid prediction for snap_scaffold_5-snap.1700-T1 Couldn't classify 4055, 4088 Couldn't classify 5472, 5776 Sorry, prediction pasa_asmbl_44275.p1 fails validation. (AAT) TC 4055-4088 GT AGG (TGA) AG 4241-4346 GT CTG (ATC) AG 4547-4650 GT AGG (TGC) AG 4870-4979 GT TGG (GTG) AG 5100-5172 GT TGG (AGC) AG 5292-5366 GT CAG (CCT) AG 5472-5776 CC GGC -recovered pasa_asmbl_44275.p1, internal, 4241, 4346 -recovered pasa_asmbl_44275.p1, internal, 4547, 4650 -recovered pasa_asmbl_44275.p1, internal, 4870, 4979 -recovered pasa_asmbl_44275.p1, internal, 5100, 5172 -recovered pasa_asmbl_44275.p1, internal, 5292, 5366 Couldn't classify 249370, 249413 Sorry, prediction pasa_asmbl_44265.p1 fails validation. (TTG) GC 249370-249413 GT TGG (GTA) AG 249622-249791 GT AGG (AGC) AG 250169-250386 GT AGG (GTG) AG 250650-250832 GT AGG -recovered pasa_asmbl_44265.p1, terminal, 250650, 250832 -recovered pasa_asmbl_44265.p1, internal, 249622, 249791 -recovered pasa_asmbl_44265.p1, internal, 250169, 250386 -recovered pasa_asmbl_44265.p1, internal, 250650, 250832 Valid prediction for snap_scaffold_5-snap.1704-T1 Valid prediction for snap_scaffold_5-snap.1701-T1 Couldn't classify 8462, 8611 Sorry, prediction pasa_asmbl_44271.p1 fails validation. (CCT) CA 8462-8611 GT AGG (GAG) AG 9422-9544 GT AGG (ATC) AG 10062-10221 GT AGG (AGC) AG 10419-10527 GT AGG (GAT) AG 10765-10943 GT AGG (AAC) AG 11109-11243 GT TGG (TAG) AG 11514-12907 AC GAA -recovered pasa_asmbl_44271.p1, terminal, 11514, 12907 -recovered pasa_asmbl_44271.p1, internal, 9422, 9544 -recovered pasa_asmbl_44271.p1, internal, 10062, 10221 -recovered pasa_asmbl_44271.p1, internal, 10419, 10527 -recovered pasa_asmbl_44271.p1, internal, 10765, 10943 -recovered pasa_asmbl_44271.p1, internal, 11109, 11243 Valid prediction for GlimmerHMM_glimmerT_12395-T1 Valid prediction for Augustus_model.g8164.t1 Valid prediction for GlimmerHMM_glimmerT_12394-T1 Valid prediction for snap_scaffold_5-snap.1734-T1 Valid prediction for GlimmerHMM_glimmerT_12373-T1 Valid prediction for snap_scaffold_5-snap.1737-T1 Valid prediction for snap_scaffold_5-snap.1731-T1 Couldn't classify 287748, 287763 Couldn't classify 288157, 288401 Sorry, prediction pasa_asmbl_44261.p1 fails validation. (TCT) TC 287748-287763 GC AGG (GTC) AG 287918-288040 GT AGG (GTA) AG 288157-288401 AA CCA -recovered pasa_asmbl_44261.p1, internal, 287918, 288040 Couldn't classify 5411, 5776 Sorry, prediction pasa_asmbl_44274.p1 fails validation. (ACT) TC 5411-5776 CC GGC Valid prediction for pasa_asmbl_44267.p1 Valid prediction for snap_scaffold_5-snap.1728-T1 Valid prediction for snap_scaffold_5-snap.1721-T1 Valid prediction for Augustus_model.g8156.t1 Valid prediction for snap_scaffold_5-snap.1714-T1 Valid prediction for GlimmerHMM_glimmerT_12399-T1 Couldn't classify 280009, 280048 Couldn't classify 282563, 282681 Sorry, prediction pasa_asmbl_44262.p1 fails validation. (GCT) AC 280009-280048 GT AGG (GTA) AG 280975-281090 GT AGG (AAC) AG 281293-281420 GT AAG (ATC) AG 282319-282419 GT GAG (GGG) AG 282563-282681 GT AAG -recovered pasa_asmbl_44262.p1, internal, 280975, 281090 -recovered pasa_asmbl_44262.p1, internal, 281293, 281420 -recovered pasa_asmbl_44262.p1, internal, 282319, 282419 -recovered pasa_asmbl_44262.p1, internal, 282563, 282681 Valid prediction for snap_scaffold_5-snap.1733-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 150852, rend_intergenic: 143611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160913, rend_intergenic: 154226 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171023, rend_intergenic: 170269 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172622, rend_intergenic: 172389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181651, rend_intergenic: 175677 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 247313, rend_intergenic: 246167 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 253690, rend_intergenic: 250780 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 295195, rend_intergenic: 291436 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 302025 -exon list size: 591 building trellis 0.2 0.3 0.5 0.7 0.8 1.0 1.2 1.3 1.5 1.7 1.9 2.0 2.2 2.4 2.5 2.7 2.9 3.0 3.2 3.4 3.5 3.7 3.9 4.0 4.2 4.4 4.6 4.7 4.9 5.1 5.2 5.4 5.6 5.7 5.9 6.1 6.2 6.4 6.6 6.7 6.9 7.1 7.3 7.4 7.6 7.8 7.9 8.1 8.3 8.4 8.6 8.8 8.9 9.1 9.3 9.4 9.6 9.8 9.9 10.1 10.3 10.5 10.6 10.8 11.0 11.1 11.3 11.5 11.6 11.8 12.0 12.1 12.3 12.5 12.6 12.8 13.0 13.2 13.3 13.5 13.7 13.8 14.0 14.2 14.3 14.5 14.7 14.8 15.0 15.2 15.3 15.5 15.7 15.9 16.0 16.2 16.4 16.5 16.7 16.9 17.0 17.2 17.4 17.5 17.7 17.9 18.0 18.2 18.4 18.5 18.7 18.9 19.1 19.2 19.4 19.6 19.7 19.9 20.1 20.2 20.4 20.6 20.7 20.9 21.1 21.2 21.4 21.6 21.8 21.9 22.1 22.3 22.4 22.6 22.8 22.9 23.1 23.3 23.4 23.6 23.8 23.9 24.1 24.3 24.5 24.6 24.8 25.0 25.1 25.3 25.5 25.6 25.8 26.0 26.1 26.3 26.5 26.6 26.8 27.0 27.2 27.3 27.5 27.7 27.8 28.0 28.2 28.3 28.5 28.7 28.8 29.0 29.2 29.3 29.5 29.7 29.8 30.0 30.2 30.4 30.5 30.7 30.9 31.0 31.2 31.4 31.5 31.7 31.9 32.0 32.2 32.4 32.5 32.7 32.9 33.1 33.2 33.4 33.6 33.7 33.9 34.1 34.2 34.4 34.6 34.7 34.9 35.1 35.2 35.4 35.6 35.8 35.9 36.1 36.3 36.4 36.6 36.8 36.9 37.1 37.3 37.4 37.6 37.8 37.9 38.1 38.3 38.4 38.6 38.8 39.0 39.1 39.3 39.5 39.6 39.8 40.0 40.1 40.3 40.5 40.6 40.8 41.0 41.1 41.3 41.5 41.7 41.8 42.0 42.2 42.3 42.5 42.7 42.8 43.0 43.2 43.3 43.5 43.7 43.8 44.0 44.2 44.4 44.5 44.7 44.9 45.0 45.2 45.4 45.5 45.7 45.9 46.0 46.2 46.4 46.5 46.7 46.9 47.0 47.2 47.4 47.6 47.7 47.9 48.1 48.2 48.4 48.6 48.7 48.9 49.1 49.2 49.4 49.6 49.7 49.9 50.1 50.3 50.4 50.6 50.8 50.9 51.1 51.3 51.4 51.6 51.8 51.9 52.1 52.3 52.4 52.6 52.8 53.0 53.1 53.3 53.5 53.6 53.8 54.0 54.1 54.3 54.5 54.6 54.8 55.0 55.1 55.3 55.5 55.6 55.8 56.0 56.2 56.3 56.5 56.7 56.8 57.0 57.2 57.3 57.5 57.7 57.8 58.0 58.2 58.3 58.5 58.7 58.9 59.0 59.2 59.4 59.5 59.7 59.9 60.0 60.2 60.4 60.5 60.7 60.9 61.0 61.2 61.4 61.6 61.7 61.9 62.1 62.2 62.4 62.6 62.7 62.9 63.1 63.2 63.4 63.6 63.7 63.9 64.1 64.2 64.4 64.6 64.8 64.9 65.1 65.3 65.4 65.6 65.8 65.9 66.1 66.3 66.4 66.6 66.8 66.9 67.1 67.3 67.5 67.6 67.8 68.0 68.1 68.3 68.5 68.6 68.8 69.0 69.1 69.3 69.5 69.6 69.8 70.0 70.2 70.3 70.5 70.7 70.8 71.0 71.2 71.3 71.5 71.7 71.8 72.0 72.2 72.3 72.5 72.7 72.8 73.0 73.2 73.4 73.5 73.7 73.9 74.0 74.2 74.4 74.5 74.7 74.9 75.0 75.2 75.4 75.5 75.7 75.9 76.1 76.2 76.4 76.6 76.7 76.9 77.1 77.2 77.4 77.6 77.7 77.9 78.1 78.2 78.4 78.6 78.8 78.9 79.1 79.3 79.4 79.6 79.8 79.9 80.1 80.3 80.4 80.6 80.8 80.9 81.1 81.3 81.5 81.6 81.8 82.0 82.1 82.3 82.5 82.6 82.8 83.0 83.1 83.3 83.5 83.6 83.8 84.0 84.1 84.3 84.5 84.7 84.8 85.0 85.2 85.3 85.5 85.7 85.8 86.0 86.2 86.3 86.5 86.7 86.8 87.0 87.2 87.4 87.5 87.7 87.9 88.0 88.2 88.4 88.5 88.7 88.9 89.0 89.2 89.4 89.5 89.7 89.9 90.1 90.2 90.4 90.6 90.7 90.9 91.1 91.2 91.4 91.6 91.7 91.9 92.1 92.2 92.4 92.6 92.7 92.9 93.1 93.3 93.4 93.6 93.8 93.9 94.1 94.3 94.4 94.6 94.8 94.9 95.1 95.3 95.4 95.6 95.8 96.0 96.1 96.3 96.5 96.6 96.8 97.0 97.1 97.3 97.5 97.6 97.8 98.0 98.1 98.3 98.5 98.7 98.8 99.0 99.2 99.3 99.5 99.7 99.8 -found 30 predictions from path traversal Error with prediction: snap lend_intergenic: 150852, rend_intergenic: 143611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160913, rend_intergenic: 154226 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171023, rend_intergenic: 170269 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172622, rend_intergenic: 172389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181651, rend_intergenic: 175677 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 247313, rend_intergenic: 246167 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 253690, rend_intergenic: 250780 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 295195, rend_intergenic: 291436 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 28 predictions persist after filtering for low support