-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_5/scaffold_5_4658029-4933871

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g7751.t1
Valid prediction for Augustus_model.g7753.t1
Valid prediction for snap_scaffold_5-snap.922-T1
Valid prediction for Augustus_model.g7754.t1
Valid prediction for snap_scaffold_5-snap.953-T1
Valid prediction for GlimmerHMM_glimmerT_11858-T1
Couldn't classify 118158, 118287
Sorry, prediction pasa_asmbl_46351.p1 fails validation.
(AAG)	 TT	118158-118287	GT	GTG
(TAG)	 AG	118393-118487	GT	AGG
(AAC)	 AG	118625-118805	GT	GGG
(GAG)	 AG	118896-119008	CG	AAC
-recovered pasa_asmbl_46351.p1, terminal, 118896, 119008
-recovered pasa_asmbl_46351.p1, internal, 118393, 118487
-recovered pasa_asmbl_46351.p1, internal, 118625, 118805
Valid prediction for snap_scaffold_5-snap.937-T1
Valid prediction for GlimmerHMM_glimmerT_11852-T1
Valid prediction for HiQ_model.g7758.t1
Valid prediction for Augustus_model.g7761.t1
Valid prediction for GlimmerHMM_glimmerT_11862-T1
Valid prediction for Augustus_model.g7745.t1
Valid prediction for GlimmerHMM_glimmerT_11840-T1
Valid prediction for Augustus_model.g7741.t1
Couldn't classify 109472, 109491
Sorry, prediction pasa_asmbl_45298.p1 fails validation.
(TGT)	 GC	109472-109491	GT	AGG
(GGA)	 AG	109616-109712	GT	CTG
(GTG)	 AG	109835-110058	GT	TGG
(GTT)	 AG	110254-110405	GT	TGG
(TGG)	 AG	111109-111281	GT	AGG
(GTG)	 AG	111542-111709	CA	AGC
-recovered pasa_asmbl_45298.p1, terminal, 111542, 111709
-recovered pasa_asmbl_45298.p1, internal, 109616, 109712
-recovered pasa_asmbl_45298.p1, internal, 109835, 110058
-recovered pasa_asmbl_45298.p1, internal, 110254, 110405
-recovered pasa_asmbl_45298.p1, internal, 111109, 111281
Valid prediction for GlimmerHMM_glimmerT_11857-T1
Valid prediction for GlimmerHMM_glimmerT_11845-T1
Valid prediction for CodingQuarry_transcript_52033-T1
Valid prediction for snap_scaffold_5-snap.947-T1
Valid prediction for GlimmerHMM_glimmerT_11861-T1
Valid prediction for pasa_asmbl_45310.p1
Valid prediction for snap_scaffold_5-snap.939-T1
Valid prediction for Augustus_model.g7737.t1
Valid prediction for snap_scaffold_5-snap.927-T1
Valid prediction for HiQ_model.g7759.t1
Valid prediction for snap_scaffold_5-snap.925-T1
Valid prediction for CodingQuarry_transcript_52039-T1
Valid prediction for snap_scaffold_5-snap.936-T1
Valid prediction for GlimmerHMM_glimmerT_11850-T1
Couldn't classify 107575, 107700
Couldn't classify 109339, 109381
Sorry, prediction pasa_asmbl_45297.p1 fails validation.
(GGT)	 TG	107575-107700	GT	AGG
(GGT)	 AG	108082-108174	GT	AGG
(GTG)	 AG	108412-108491	GT	AAG
(CTA)	 AG	109339-109381	GC	GGG
-recovered pasa_asmbl_45297.p1, internal, 108082, 108174
-recovered pasa_asmbl_45297.p1, internal, 108412, 108491
-recovered pasa_asmbl_45297.p1, internal, 109339, 109381
Valid prediction for snap_scaffold_5-snap.951-T1
Valid prediction for CodingQuarry_transcript_52041-T1
Valid prediction for GlimmerHMM_glimmerT_11846-T1
Valid prediction for snap_scaffold_5-snap.931-T1
Valid prediction for GlimmerHMM_glimmerT_11848-T1
Valid prediction for pasa_asmbl_45313.p1
Valid prediction for snap_scaffold_5-snap.938-T1
Valid prediction for snap_scaffold_5-snap.952-T1
Valid prediction for snap_scaffold_5-snap.934-T1
Valid prediction for GlimmerHMM_glimmerT_11859-T1
Valid prediction for HiQ_model.g7740.t1
Valid prediction for GlimmerHMM_glimmerT_11856-T1
Valid prediction for snap_scaffold_5-snap.930-T1
Couldn't classify 142700, 144211
Sorry, prediction pasa_asmbl_45301.p1 fails validation.
(CCT)	 GT	142700-144211	GT	AGG
(GTT)	 AG	144342-144680	GT	CGG
(AAA)	 AG	144867-145061	GT	TGG
(GTG)	 AG	145183-145341	GT	AGG
(CCG)	 AG	145505-145636	TT	AAT
-recovered pasa_asmbl_45301.p1, terminal, 145505, 145636
-recovered pasa_asmbl_45301.p1, internal, 144342, 144680
-recovered pasa_asmbl_45301.p1, internal, 144867, 145061
-recovered pasa_asmbl_45301.p1, internal, 145183, 145341
Valid prediction for GlimmerHMM_glimmerT_11832-T1
Valid prediction for GlimmerHMM_glimmerT_11851-T1
Valid prediction for Augustus_model.g7748.t1
Valid prediction for pasa_asmbl_45311.p1
Valid prediction for HiQ_model.g7756.t1
Valid prediction for GlimmerHMM_glimmerT_11844-T1
Valid prediction for snap_scaffold_5-snap.945-T1
Valid prediction for HiQ_model.g7747.t1
Valid prediction for CodingQuarry_transcript_52040-T1
Valid prediction for pasa_asmbl_45306.p1
Valid prediction for snap_scaffold_5-snap.924-T1
Valid prediction for GlimmerHMM_glimmerT_11834-T1
Valid prediction for CodingQuarry_transcript_52035-T1
Valid prediction for snap_scaffold_5-snap.928-T1
Valid prediction for CodingQuarry_transcript_52031-T1
Valid prediction for CodingQuarry_transcript_52030-T1
Valid prediction for GlimmerHMM_glimmerT_11863-T1
Couldn't classify 102413, 102489
Couldn't classify 103171, 103242
Sorry, prediction pasa_asmbl_46424.p1 fails validation.
(GTG)	 AA	102413-102489	GT	AGG
(TGT)	 AG	102735-102812	GT	AGG
(GCA)	 AG	102909-102978	GT	AGG
(GTC)	 AG	103171-103242	GC	ATG
add_exon() Sorry, pasa_asmbl_46424.p1 102735-102812-terminal-1 is invalid.
-recovered pasa_asmbl_46424.p1, terminal, 102735, 102812
-recovered pasa_asmbl_46424.p1, internal, 102735, 102812
-recovered pasa_asmbl_46424.p1, internal, 102909, 102978
-recovered pasa_asmbl_46424.p1, internal, 103171, 103242
Valid prediction for pasa_asmbl_45302.p1
Valid prediction for CodingQuarry_transcript_52028-T1
Valid prediction for Augustus_model.g7764.t1
Valid prediction for CodingQuarry_transcript_52037-T1
Valid prediction for HiQ_model.g7760.t1
Valid prediction for GlimmerHMM_glimmerT_11837-T1
Valid prediction for pasa_asmbl_45288.p1
Valid prediction for HiQ_model.g7739.t1
Valid prediction for snap_scaffold_5-snap.941-T1
Valid prediction for CodingQuarry_transcript_52042-T1
Valid prediction for snap_scaffold_5-snap.963-T1
Couldn't classify 191757, 191972
Couldn't classify 192283, 192284
Sorry, prediction CodingQuarry_transcript_52036-T1 fails validation.
(ATG)	 CC	188053-188083	GT	AGG
(AGC)	 AG	190263-190327	GT	AGG
(GAT)	 AG	190773-190863	GT	GGG
(GTC)	 AG	191757-191972	CT	CTC
(GAT)	 TC	192283-192284	TT	GAT
-recovered CodingQuarry_transcript_52036-T1, initial, 188053, 188083
-recovered CodingQuarry_transcript_52036-T1, internal, 190263, 190327
-recovered CodingQuarry_transcript_52036-T1, internal, 190773, 190863
Valid prediction for Augustus_model.g7755.t1
Valid prediction for HiQ_model.g7743.t1
Valid prediction for snap_scaffold_5-snap.954-T1
Valid prediction for snap_scaffold_5-snap.955-T1
Valid prediction for snap_scaffold_5-snap.946-T1
Valid prediction for pasa_asmbl_45294.p1
Couldn't classify 227529, 228010
Sorry, prediction pasa_asmbl_45315.p1 fails validation.
(AGC)	 AG	227529-228010	GT	AAG
(GGT)	 AG	228123-228192	GT	AGG
(ATG)	 AG	228320-228410	GT	AGG
(GAG)	 AG	228704-228768	GT	CTG
(GTG)	 AG	229344-229432	GT	GAG
(CTG)	 AG	229652-229784	GT	AGG
(GTG)	 AG	229928-230118	GT	AGG
(TAA)	 AG	230316-230381	GT	GGG
(AGG)	 AG	230603-230762	GT	GGG
(ATG)	 AG	231564-231743	GT	TTG
(GAG)	 AG	231850-231966	GT	AGG
(GTG)	 AG	232121-232258	CT	GAC
-recovered pasa_asmbl_45315.p1, initial, 228320, 228410
-recovered pasa_asmbl_45315.p1, initial, 231564, 231743
-recovered pasa_asmbl_45315.p1, terminal, 232121, 232258
-recovered pasa_asmbl_45315.p1, internal, 227529, 228010
-recovered pasa_asmbl_45315.p1, internal, 228123, 228192
-recovered pasa_asmbl_45315.p1, internal, 228320, 228410
-recovered pasa_asmbl_45315.p1, internal, 228704, 228768
-recovered pasa_asmbl_45315.p1, internal, 229344, 229432
-recovered pasa_asmbl_45315.p1, internal, 229652, 229784
-recovered pasa_asmbl_45315.p1, internal, 229928, 230118
-recovered pasa_asmbl_45315.p1, internal, 230316, 230381
-recovered pasa_asmbl_45315.p1, internal, 230603, 230762
-recovered pasa_asmbl_45315.p1, internal, 231564, 231743
-recovered pasa_asmbl_45315.p1, internal, 231850, 231966
Valid prediction for Augustus_model.g7752.t1
Valid prediction for GlimmerHMM_glimmerT_11835-T1
Valid prediction for snap_scaffold_5-snap.958-T1
Valid prediction for snap_scaffold_5-snap.942-T1
Valid prediction for CodingQuarry_transcript_52027-T1
Valid prediction for GlimmerHMM_glimmerT_11842-T1
Valid prediction for Augustus_model.g7750.t1
Valid prediction for pasa_asmbl_45291.p1
Valid prediction for GlimmerHMM_glimmerT_11855-T1
Valid prediction for CodingQuarry_transcript_52029-T1
Valid prediction for snap_scaffold_5-snap.933-T1
Valid prediction for snap_scaffold_5-snap.940-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for Augustus_model.g7763.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_11849-T1
Valid prediction for snap_scaffold_5-snap.944-T1
Valid prediction for snap_scaffold_5-snap.961-T1
Valid prediction for GlimmerHMM_glimmerT_11839-T1
Valid prediction for GlimmerHMM_glimmerT_11833-T1
Valid prediction for HiQ_model.g7744.t1
Valid prediction for HiQ_model.g7742.t1
Valid prediction for snap_scaffold_5-snap.932-T1
Valid prediction for snap_scaffold_5-snap.920-T1
Valid prediction for snap_scaffold_5-snap.950-T1
Valid prediction for GlimmerHMM_glimmerT_11836-T1
Valid prediction for pasa_asmbl_43984.p1
Valid prediction for snap_scaffold_5-snap.956-T1
Valid prediction for pasa_asmbl_43980.p1
Valid prediction for pasa_asmbl_43985.p1
Valid prediction for Augustus_model.g7762.t1
Valid prediction for CodingQuarry_transcript_52032-T1
Valid prediction for snap_scaffold_5-snap.926-T1
Valid prediction for HiQ_model.g7749.t1
Valid prediction for CodingQuarry_transcript_52026-T1
Valid prediction for CodingQuarry_transcript_52024-T1
Valid prediction for snap_scaffold_5-snap.964-T1
Valid prediction for pasa_asmbl_44003.p1
Valid prediction for GlimmerHMM_glimmerT_11860-T1
Valid prediction for GlimmerHMM_glimmerT_11847-T1
Valid prediction for snap_scaffold_5-snap.935-T1
Valid prediction for snap_scaffold_5-snap.948-T1
Couldn't classify 225436, 225446
Sorry, prediction pasa_asmbl_43999.p1 fails validation.
(ATG)	 CT	223010-223052	GT	AGG
(ATC)	 AG	223769-223919	GT	AGG
(GTG)	 AG	224082-224256	GT	AGG
(GAC)	 AG	224606-224633	GT	CGG
(GCC)	 AG	224726-224855	GT	GAG
(AGA)	 AG	225148-225245	GT	AGG
(GGG)	 AG	225436-225446	GG	GGG
-recovered pasa_asmbl_43999.p1, initial, 223010, 223052
add_exon() Sorry, pasa_asmbl_43999.p1 225148-225245-terminal-2 is invalid.
-recovered pasa_asmbl_43999.p1, terminal, 225148, 225245
-recovered pasa_asmbl_43999.p1, internal, 223769, 223919
-recovered pasa_asmbl_43999.p1, internal, 224082, 224256
-recovered pasa_asmbl_43999.p1, internal, 224606, 224633
-recovered pasa_asmbl_43999.p1, internal, 224726, 224855
-recovered pasa_asmbl_43999.p1, internal, 225148, 225245
Valid prediction for GlimmerHMM_glimmerT_11843-T1
Couldn't classify 78631, 78728
Sorry, prediction pasa_asmbl_44019.p1 fails validation.
(ATG)	 CC	77663-77868	GT	AAG
(GAT)	 AG	78053-78186	GT	GGG
(AAT)	 AG	78631-78728	AG	GAA
-recovered pasa_asmbl_44019.p1, initial, 77663, 77868
-recovered pasa_asmbl_44019.p1, internal, 78053, 78186
Valid prediction for snap_scaffold_5-snap.959-T1
Valid prediction for GlimmerHMM_glimmerT_11831-T1
Valid prediction for Augustus_model.g7757.t1
Couldn't classify 185985, 186041
Sorry, prediction pasa_asmbl_44008.p1 fails validation.
(ATG)	 GC	182468-182654	GT	ACG
(GCC)	 AG	183364-183440	GT	AGG
(GAG)	 AG	183665-183766	GT	CGG
(AGG)	 AG	184071-184130	GT	AGG
(CAA)	 AG	184576-184645	GT	AGG
(CCA)	 AG	184819-184984	GT	AGG
(GAC)	 AG	185430-185499	GT	CGG
(GTG)	 AG	185690-185845	GT	AGG
(ACA)	 AG	185985-186041	GT	GTG
-recovered pasa_asmbl_44008.p1, initial, 182468, 182654
-recovered pasa_asmbl_44008.p1, internal, 183364, 183440
-recovered pasa_asmbl_44008.p1, internal, 183665, 183766
-recovered pasa_asmbl_44008.p1, internal, 184071, 184130
-recovered pasa_asmbl_44008.p1, internal, 184576, 184645
-recovered pasa_asmbl_44008.p1, internal, 184819, 184984
-recovered pasa_asmbl_44008.p1, internal, 185430, 185499
-recovered pasa_asmbl_44008.p1, internal, 185690, 185845
-recovered pasa_asmbl_44008.p1, internal, 185985, 186041
Valid prediction for GlimmerHMM_glimmerT_11854-T1
Valid prediction for snap_scaffold_5-snap.962-T1
Couldn't classify 188057, 189214
Sorry, prediction pasa_asmbl_44007.p1 fails validation.
(ATG)	 TC	186591-186679	GT	GGG
(CCT)	 AG	186955-187006	GT	CTG
(GAG)	 AG	187181-187251	GT	AAG
(GTT)	 AG	187371-187538	GT	CAG
(GAG)	 AG	187822-187930	GT	AGG
(GCT)	 AG	188057-189214	GC	AGG
-recovered pasa_asmbl_44007.p1, initial, 186591, 186679
-recovered pasa_asmbl_44007.p1, internal, 186955, 187006
-recovered pasa_asmbl_44007.p1, internal, 187181, 187251
-recovered pasa_asmbl_44007.p1, internal, 187371, 187538
-recovered pasa_asmbl_44007.p1, internal, 187822, 187930
-recovered pasa_asmbl_44007.p1, internal, 188057, 189214
Valid prediction for GlimmerHMM_glimmerT_11830-T1
Valid prediction for snap_scaffold_5-snap.949-T1
Valid prediction for CodingQuarry_transcript_52038-T1
Valid prediction for HiQ_model.g7736.t1
Valid prediction for snap_scaffold_5-snap.923-T1
Valid prediction for snap_scaffold_5-snap.921-T1
Valid prediction for GlimmerHMM_glimmerT_11838-T1
Valid prediction for CodingQuarry_transcript_52022-T1
Valid prediction for HiQ_model.g7746.t1
Valid prediction for pasa_asmbl_44009.p1
Valid prediction for snap_scaffold_5-snap.960-T1
Valid prediction for snap_scaffold_5-snap.957-T1
Valid prediction for HiQ_model.g7738.t1
Valid prediction for CodingQuarry_transcript_52023-T1
Valid prediction for CodingQuarry_transcript_52025-T1
Valid prediction for snap_scaffold_5-snap.929-T1
Valid prediction for GlimmerHMM_glimmerT_11841-T1
Couldn't classify 189581, 190033
Sorry, prediction pasa_asmbl_44006.p1 fails validation.
(GAG)	 CT	189581-190033	AA	GAA
Valid prediction for snap_scaffold_5-snap.943-T1
Valid prediction for GlimmerHMM_glimmerT_11853-T1
Valid prediction for CodingQuarry_transcript_52034-T1
Couldn't classify 225498, 225579
Sorry, prediction pasa_asmbl_43996.p1 fails validation.
(GGG)	 CC	225498-225579	GT	TGG
(GCT)	 AG	225823-225942	GT	CAG
(GTT)	 AG	226180-226344	GT	CGG
(GTA)	 AG	226537-226673	GT	AGG
(GGA)	 AG	227045-227129	GT	AGG
(GTT)	 AG	227671-227788	GT	AGG
(AGG)	 AG	228111-228228	GT	TGG
(GTG)	 AG	228934-229731	AG	GAA
-recovered pasa_asmbl_43996.p1, terminal, 228934, 229731
-recovered pasa_asmbl_43996.p1, internal, 225823, 225942
-recovered pasa_asmbl_43996.p1, internal, 226180, 226344
-recovered pasa_asmbl_43996.p1, internal, 226537, 226673
-recovered pasa_asmbl_43996.p1, internal, 227045, 227129
-recovered pasa_asmbl_43996.p1, internal, 227671, 227788
-recovered pasa_asmbl_43996.p1, internal, 228111, 228228

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 45505, rend_intergenic: 45235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71981, rend_intergenic: 70146  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157182, rend_intergenic: 151533  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192812, rend_intergenic: 186817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203430, rend_intergenic: 202329  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232624, rend_intergenic: 229883  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 239144, rend_intergenic: 236697  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 259225, rend_intergenic: 244471  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 274688, rend_intergenic: 265561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 275843
-exon list size: 588


building trellis

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33.9    
34.1    
34.2    
34.4    
34.6    
34.7    
34.9    
35.1    
35.3    
35.4    
35.6    
35.8    
35.9    
36.1    
36.3    
36.4    
36.6    
36.8    
36.9    
37.1    
37.3    
37.5    
37.6    
37.8    
38.0    
38.1    
38.3    
38.5    
38.6    
38.8    
39.0    
39.2    
39.3    
39.5    
39.7    
39.8    
40.0    
40.2    
40.3    
40.5    
40.7    
40.8    
41.0    
41.2    
41.4    
41.5    
41.7    
41.9    
42.0    
42.2    
42.4    
42.5    
42.7    
42.9    
43.1    
43.2    
43.4    
43.6    
43.7    
43.9    
44.1    
44.2    
44.4    
44.6    
44.7    
44.9    
45.1    
45.3    
45.4    
45.6    
45.8    
45.9    
46.1    
46.3    
46.4    
46.6    
46.8    
46.9    
47.1    
47.3    
47.5    
47.6    
47.8    
48.0    
48.1    
48.3    
48.5    
48.6    
48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.4    
51.5    
51.7    
51.9    
52.0    
52.2    
52.4    
52.5    
52.7    
52.9    
53.1    
53.2    
53.4    
53.6    
53.7    
53.9    
54.1    
54.2    
54.4    
54.6    
54.7    
54.9    
55.1    
55.3    
55.4    
55.6    
55.8    
55.9    
56.1    
56.3    
56.4    
56.6    
56.8    
56.9    
57.1    
57.3    
57.5    
57.6    
57.8    
58.0    
58.1    
58.3    
58.5    
58.6    
58.8    
59.0    
59.2    
59.3    
59.5    
59.7    
59.8    
60.0    
60.2    
60.3    
60.5    
60.7    
60.8    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.4    
62.5    
62.7    
62.9    
63.1    
63.2    
63.4    
63.6    
63.7    
63.9    
64.1    
64.2    
64.4    
64.6    
64.7    
64.9    
65.1    
65.3    
65.4    
65.6    
65.8    
65.9    
66.1    
66.3    
66.4    
66.6    
66.8    
66.9    
67.1    
67.3    
67.5    
67.6    
67.8    
68.0    
68.1    
68.3    
68.5    
68.6    
68.8    
69.0    
69.2    
69.3    
69.5    
69.7    
69.8    
70.0    
70.2    
70.3    
70.5    
70.7    
70.8    
71.0    
71.2    
71.4    
71.5    
71.7    
71.9    
72.0    
72.2    
72.4    
72.5    
72.7    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.1    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.3    
77.5    
77.6    
77.8    
78.0    
78.1    
78.3    
78.5    
78.6    
78.8    
79.0    
79.2    
79.3    
79.5    
79.7    
79.8    
80.0    
80.2    
80.3    
80.5    
80.7    
80.8    
81.0    
81.2    
81.4    
81.5    
81.7    
81.9    
82.0    
82.2    
82.4    
82.5    
82.7    
82.9    
83.1    
83.2    
83.4    
83.6    
83.7    
83.9    
84.1    
84.2    
84.4    
84.6    
84.7    
84.9    
85.1    
85.3    
85.4    
85.6    
85.8    
85.9    
86.1    
86.3    
86.4    
86.6    
86.8    
86.9    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.2    
89.3    
89.5    
89.7    
89.8    
90.0    
90.2    
90.3    
90.5    
90.7    
90.8    
91.0    
91.2    
91.4    
91.5    
91.7    
91.9    
92.0    
92.2    
92.4    
92.5    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.3    
95.4    
95.6    
95.8    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
96.9    
97.1    
97.3    
97.5    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 45505, rend_intergenic: 45235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71981, rend_intergenic: 70146  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157182, rend_intergenic: 151533  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192812, rend_intergenic: 186817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203430, rend_intergenic: 202329  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232624, rend_intergenic: 229883  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 239144, rend_intergenic: 236697  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 259225, rend_intergenic: 244471  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 274688, rend_intergenic: 265561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 30 predictions persist after filtering for low support