-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_5/scaffold_5_18387306-18580149

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g9071.t1
Valid prediction for GlimmerHMM_glimmerT_13683-T1
Valid prediction for snap_scaffold_5-snap.3451-T1
Valid prediction for snap_scaffold_5-snap.3460-T1
Valid prediction for CodingQuarry_transcript_52460-T1
Valid prediction for CodingQuarry_transcript_52463-T1
Valid prediction for HiQ_model.g9065.t1
Valid prediction for snap_scaffold_5-snap.3433-T1
Valid prediction for GlimmerHMM_glimmerT_13681-T1
Valid prediction for CodingQuarry_transcript_52459-T1
Valid prediction for snap_scaffold_5-snap.3449-T1
Valid prediction for GlimmerHMM_glimmerT_13662-T1
Valid prediction for Augustus_model.g9077.t1
Couldn't classify 23502, 23665
Sorry, prediction pasa_asmbl_46357.p1 fails validation.
(TTG)	 AC	23502-23665	GT	TGG
(GCG)	 AG	23808-23910	GT	AGG
(ATA)	 AG	24142-24248	GT	AGG
(GCT)	 AG	24359-24461	GC	AAG
-recovered pasa_asmbl_46357.p1, terminal, 24359, 24461
-recovered pasa_asmbl_46357.p1, internal, 23808, 23910
-recovered pasa_asmbl_46357.p1, internal, 24142, 24248
-recovered pasa_asmbl_46357.p1, internal, 24359, 24461
Valid prediction for snap_scaffold_5-snap.3469-T1
Valid prediction for snap_scaffold_5-snap.3463-T1
Valid prediction for pasa_asmbl_46259.p1
Valid prediction for snap_scaffold_5-snap.3457-T1
Valid prediction for snap_scaffold_5-snap.3447-T1
Valid prediction for snap_scaffold_5-snap.3456-T1
Valid prediction for snap_scaffold_5-snap.3448-T1
Valid prediction for CodingQuarry_transcript_52458-T1
Valid prediction for GlimmerHMM_glimmerT_13654-T1
Valid prediction for GlimmerHMM_glimmerT_13657-T1
Valid prediction for Augustus_model.g9075.t1
Valid prediction for HiQ_model.g9073.t1
Valid prediction for Augustus_model.g9081.t1
Valid prediction for GlimmerHMM_glimmerT_13656-T1
Valid prediction for GlimmerHMM_glimmerT_13667-T1
Valid prediction for snap_scaffold_5-snap.3431-T1
Valid prediction for GlimmerHMM_glimmerT_13682-T1
Valid prediction for GlimmerHMM_glimmerT_13670-T1
Valid prediction for snap_scaffold_5-snap.3429-T1
Valid prediction for snap_scaffold_5-snap.3454-T1
Valid prediction for snap_scaffold_5-snap.3441-T1
Valid prediction for Augustus_model.g9072.t1
Valid prediction for GlimmerHMM_glimmerT_13665-T1
Couldn't classify 85265, 85435
Couldn't classify 89546, 89665
Sorry, prediction pasa_asmbl_46361.p1 fails validation.
(GAT)	 CA	85265-85435	GT	AGG
(ATC)	 AG	87013-87075	GT	AGG
(ACG)	 AG	89546-89665	GT	AGG
-recovered pasa_asmbl_46361.p1, internal, 87013, 87075
-recovered pasa_asmbl_46361.p1, internal, 89546, 89665
Valid prediction for GlimmerHMM_glimmerT_13660-T1
Valid prediction for Augustus_model.g9078.t1
Valid prediction for GlimmerHMM_glimmerT_13671-T1
Valid prediction for snap_scaffold_5-snap.3466-T1
Valid prediction for pasa_asmbl_46264.p1
Valid prediction for HiQ_model.g9066.t1
Valid prediction for snap_scaffold_5-snap.3445-T1
Valid prediction for pasa_asmbl_46274.p1
Valid prediction for snap_scaffold_5-snap.3439-T1
Valid prediction for GlimmerHMM_glimmerT_13672-T1
Valid prediction for snap_scaffold_5-snap.3434-T1
Couldn't classify 173166, 173250
Sorry, prediction pasa_asmbl_46268.p1 fails validation.
(TCG)	 TT	173166-173250	GT	CGG
(GTC)	 AG	173622-173712	GT	TTG
(TTT)	 AG	173845-173922	GT	GGG
(GCC)	 AG	174766-174856	GG	GAG
-recovered pasa_asmbl_46268.p1, terminal, 174766, 174856
-recovered pasa_asmbl_46268.p1, internal, 173622, 173712
-recovered pasa_asmbl_46268.p1, internal, 173845, 173922
Valid prediction for snap_scaffold_5-snap.3442-T1
Valid prediction for GlimmerHMM_glimmerT_13664-T1
Valid prediction for Augustus_model.g9076.t1
Valid prediction for CodingQuarry_transcript_52462-T1
Valid prediction for Augustus_model.g9067.t1
Valid prediction for GlimmerHMM_glimmerT_13652-T1
Valid prediction for GlimmerHMM_glimmerT_13685-T1
Valid prediction for GlimmerHMM_glimmerT_13679-T1
Valid prediction for pasa_asmbl_46260.p1
Valid prediction for GlimmerHMM_glimmerT_13675-T1
Valid prediction for snap_scaffold_5-snap.3464-T1
Valid prediction for snap_scaffold_5-snap.3444-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_13661-T1
Valid prediction for snap_scaffold_5-snap.3450-T1
Valid prediction for snap_scaffold_5-snap.3467-T1
Valid prediction for GlimmerHMM_glimmerT_13659-T1
Valid prediction for snap_scaffold_5-snap.3462-T1
Valid prediction for Augustus_model.g9074.t1
Valid prediction for snap_scaffold_5-snap.3438-T1
Valid prediction for GlimmerHMM_glimmerT_13655-T1
Valid prediction for CodingQuarry_transcript_52461-T1
Valid prediction for GlimmerHMM_glimmerT_13668-T1
Valid prediction for GlimmerHMM_glimmerT_13676-T1
Valid prediction for HiQ_model.g9079.t1
Valid prediction for snap_scaffold_5-snap.3461-T1
Valid prediction for GlimmerHMM_glimmerT_13651-T1
Valid prediction for pasa_asmbl_44837.p1
Valid prediction for snap_scaffold_5-snap.3432-T1
Couldn't classify 12835, 12999
Sorry, prediction pasa_asmbl_44847.p2 fails validation.
(ATG)	 TA	12507-12641	GT	AGG
(CAA)	 AG	12835-12999	CT	GAC
-recovered pasa_asmbl_44847.p2, initial, 12507, 12641
Valid prediction for pasa_asmbl_44838.p1
Valid prediction for snap_scaffold_5-snap.3437-T1
Valid prediction for Augustus_model.g9069.t1
Valid prediction for snap_scaffold_5-snap.3446-T1
Valid prediction for snap_scaffold_5-snap.3468-T1
Valid prediction for snap_scaffold_5-snap.3465-T1
Valid prediction for snap_scaffold_5-snap.3440-T1
Couldn't classify 10122, 10478
Sorry, prediction pasa_asmbl_45031.p1 fails validation.
(GCG)	 CA	10122-10478	GA	AGG
Valid prediction for snap_scaffold_5-snap.3435-T1
Valid prediction for snap_scaffold_5-snap.3459-T1
Valid prediction for GlimmerHMM_glimmerT_13663-T1
Valid prediction for GlimmerHMM_glimmerT_13678-T1
Valid prediction for Augustus_model.g9070.t1
Valid prediction for snap_scaffold_5-snap.3436-T1
Couldn't classify 67566, 67598
Sorry, prediction pasa_asmbl_44843.p1 fails validation.
(ATG)	 CG	65827-65989	GT	AGG
(AAC)	 AG	66214-66371	GT	AGG
(ATC)	 AG	67566-67598	GA	AGG
-recovered pasa_asmbl_44843.p1, initial, 65827, 65989
-recovered pasa_asmbl_44843.p1, internal, 66214, 66371
Valid prediction for snap_scaffold_5-snap.3458-T1
Couldn't classify 147551, 148567
Sorry, prediction pasa_asmbl_44839.p1 fails validation.
(ATG)	 GC	147551-148567	TG	GGT
Valid prediction for GlimmerHMM_glimmerT_13684-T1
Valid prediction for GlimmerHMM_glimmerT_13653-T1
Couldn't classify 13855, 13872
Sorry, prediction pasa_asmbl_44846.p1 fails validation.
(CCC)	 TC	13855-13872	GT	AGG
(TAT)	 AG	14225-14318	GT	AGG
(CCA)	 AG	14486-14618	GT	AGG
(GCT)	 AG	14721-14874	GT	AGG
(GAC)	 AG	15162-15257	GT	AGG
(GCC)	 AG	15369-15509	GT	AGG
(TCA)	 AG	15595-15874	GT	CGG
(CGT)	 AG	16199-16362	GC	AGG
(GAC)	 AG	16802-16945	CC	GAC
-recovered pasa_asmbl_44846.p1, terminal, 14486, 14618
-recovered pasa_asmbl_44846.p1, terminal, 16802, 16945
-recovered pasa_asmbl_44846.p1, internal, 14225, 14318
-recovered pasa_asmbl_44846.p1, internal, 14486, 14618
-recovered pasa_asmbl_44846.p1, internal, 14721, 14874
-recovered pasa_asmbl_44846.p1, internal, 15162, 15257
-recovered pasa_asmbl_44846.p1, internal, 15369, 15509
-recovered pasa_asmbl_44846.p1, internal, 15595, 15874
-recovered pasa_asmbl_44846.p1, internal, 16199, 16362
Valid prediction for GlimmerHMM_glimmerT_13677-T1
Valid prediction for GlimmerHMM_glimmerT_13669-T1
Valid prediction for GlimmerHMM_glimmerT_13658-T1
Valid prediction for snap_scaffold_5-snap.3455-T1
Couldn't classify 71813, 71932
Sorry, prediction pasa_asmbl_44840.p1 fails validation.
(ACG)	 AG	71813-71932	GT	AGG
(GAC)	 AG	72016-72109	GT	AGG
(GGG)	 AG	72397-72516	GT	TGG
(AAC)	 AG	72666-72808	GT	GGG
(AAT)	 AG	73414-73528	GT	GCG
(GGG)	 AG	74031-74100	GT	AGG
(CAG)	 AG	74207-74351	GT	TGG
(TGT)	 AG	74871-75182	GT	AGG
(GAT)	 AG	75275-75316	GT	GGG
(CAA)	 AG	75520-75677	GT	CGG
(GCG)	 AG	76098-76153	GT	AGG
(ATC)	 AG	76661-76800	GT	AGG
(CTG)	 AG	76941-77429	TG	AAT
-recovered pasa_asmbl_44840.p1, terminal, 72016, 72109
-recovered pasa_asmbl_44840.p1, terminal, 76941, 77429
-recovered pasa_asmbl_44840.p1, internal, 71813, 71932
-recovered pasa_asmbl_44840.p1, internal, 72016, 72109
-recovered pasa_asmbl_44840.p1, internal, 72397, 72516
-recovered pasa_asmbl_44840.p1, internal, 72666, 72808
-recovered pasa_asmbl_44840.p1, internal, 73414, 73528
-recovered pasa_asmbl_44840.p1, internal, 74031, 74100
-recovered pasa_asmbl_44840.p1, internal, 74207, 74351
-recovered pasa_asmbl_44840.p1, internal, 74871, 75182
-recovered pasa_asmbl_44840.p1, internal, 75275, 75316
-recovered pasa_asmbl_44840.p1, internal, 75520, 75677
-recovered pasa_asmbl_44840.p1, internal, 76098, 76153
-recovered pasa_asmbl_44840.p1, internal, 76661, 76800
Valid prediction for Augustus_model.g9064.t1
Valid prediction for HiQ_model.g9068.t1
Valid prediction for Augustus_model.g9080.t1
Valid prediction for GlimmerHMM_glimmerT_13666-T1
Valid prediction for CodingQuarry_transcript_52457-T1
Valid prediction for snap_scaffold_5-snap.3443-T1
Valid prediction for GlimmerHMM_glimmerT_13680-T1
Valid prediction for snap_scaffold_5-snap.3452-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_5-snap.3430-T1
Valid prediction for snap_scaffold_5-snap.3453-T1
Valid prediction for GlimmerHMM_glimmerT_13673-T1
Valid prediction for Augustus_model.g9063.t1
Valid prediction for GlimmerHMM_glimmerT_13674-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 160174, rend_intergenic: 160171  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17424, rend_intergenic: 13153  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24461, rend_intergenic: 19603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45294, rend_intergenic: 38604  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55328, rend_intergenic: 52452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61107, rend_intergenic: 56669  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68966, rend_intergenic: 61257  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89027, rend_intergenic: 71855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97509, rend_intergenic: 89157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99781, rend_intergenic: 98075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104676, rend_intergenic: 100672  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117831, rend_intergenic: 115416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127015, rend_intergenic: 118495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130389, rend_intergenic: 127015  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134043, rend_intergenic: 130837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145019, rend_intergenic: 134258  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161719, rend_intergenic: 145034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165100, rend_intergenic: 162424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 192844
-exon list size: 455


building trellis

0.2    
0.4    
0.7    
0.9    
1.1    
1.3    
1.5    
1.8    
2.0    
2.2    
2.4    
2.6    
2.8    
3.1    
3.3    
3.5    
3.7    
3.9    
4.2    
4.4    
4.6    
4.8    
5.0    
5.3    
5.5    
5.7    
5.9    
6.1    
6.3    
6.6    
6.8    
7.0    
7.2    
7.4    
7.7    
7.9    
8.1    
8.3    
8.5    
8.8    
9.0    
9.2    
9.4    
9.6    
9.8    
10.1    
10.3    
10.5    
10.7    
10.9    
11.2    
11.4    
11.6    
11.8    
12.0    
12.3    
12.5    
12.7    
12.9    
13.1    
13.3    
13.6    
13.8    
14.0    
14.2    
14.4    
14.7    
14.9    
15.1    
15.3    
15.5    
15.8    
16.0    
16.2    
16.4    
16.6    
16.8    
17.1    
17.3    
17.5    
17.7    
17.9    
18.2    
18.4    
18.6    
18.8    
19.0    
19.3    
19.5    
19.7    
19.9    
20.1    
20.4    
20.6    
20.8    
21.0    
21.2    
21.4    
21.7    
21.9    
22.1    
22.3    
22.5    
22.8    
23.0    
23.2    
23.4    
23.6    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.2    
25.4    
25.6    
25.8    
26.0    
26.3    
26.5    
26.7    
26.9    
27.1    
27.4    
27.6    
27.8    
28.0    
28.2    
28.4    
28.7    
28.9    
29.1    
29.3    
29.5    
29.8    
30.0    
30.2    
30.4    
30.6    
30.9    
31.1    
31.3    
31.5    
31.7    
31.9    
32.2    
32.4    
32.6    
32.8    
33.0    
33.3    
33.5    
33.7    
33.9    
34.1    
34.4    
34.6    
34.8    
35.0    
35.2    
35.4    
35.7    
35.9    
36.1    
36.3    
36.5    
36.8    
37.0    
37.2    
37.4    
37.6    
37.9    
38.1    
38.3    
38.5    
38.7    
38.9    
39.2    
39.4    
39.6    
39.8    
40.0    
40.3    
40.5    
40.7    
40.9    
41.1    
41.4    
41.6    
41.8    
42.0    
42.2    
42.5    
42.7    
42.9    
43.1    
43.3    
43.5    
43.8    
44.0    
44.2    
44.4    
44.6    
44.9    
45.1    
45.3    
45.5    
45.7    
46.0    
46.2    
46.4    
46.6    
46.8    
47.0    
47.3    
47.5    
47.7    
47.9    
48.1    
48.4    
48.6    
48.8    
49.0    
49.2    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.8    
51.0    
51.2    
51.4    
51.6    
51.9    
52.1    
52.3    
52.5    
52.7    
53.0    
53.2    
53.4    
53.6    
53.8    
54.0    
54.3    
54.5    
54.7    
54.9    
55.1    
55.4    
55.6    
55.8    
56.0    
56.2    
56.5    
56.7    
56.9    
57.1    
57.3    
57.5    
57.8    
58.0    
58.2    
58.4    
58.6    
58.9    
59.1    
59.3    
59.5    
59.7    
60.0    
60.2    
60.4    
60.6    
60.8    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.4    
62.6    
62.8    
63.0    
63.2    
63.5    
63.7    
63.9    
64.1    
64.3    
64.6    
64.8    
65.0    
65.2    
65.4    
65.6    
65.9    
66.1    
66.3    
66.5    
66.7    
67.0    
67.2    
67.4    
67.6    
67.8    
68.1    
68.3    
68.5    
68.7    
68.9    
69.1    
69.4    
69.6    
69.8    
70.0    
70.2    
70.5    
70.7    
70.9    
71.1    
71.3    
71.6    
71.8    
72.0    
72.2    
72.4    
72.6    
72.9    
73.1    
73.3    
73.5    
73.7    
74.0    
74.2    
74.4    
74.6    
74.8    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.4    
76.6    
76.8    
77.0    
77.2    
77.5    
77.7    
77.9    
78.1    
78.3    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.9    
80.1    
80.3    
80.5    
80.7    
81.0    
81.2    
81.4    
81.6    
81.8    
82.1    
82.3    
82.5    
82.7    
82.9    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.5    
84.7    
84.9    
85.1    
85.3    
85.6    
85.8    
86.0    
86.2    
86.4    
86.7    
86.9    
87.1    
87.3    
87.5    
87.7    
88.0    
88.2    
88.4    
88.6    
88.8    
89.1    
89.3    
89.5    
89.7    
89.9    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.5    
91.7    
91.9    
92.1    
92.3    
92.6    
92.8    
93.0    
93.2    
93.4    
93.7    
93.9    
94.1    
94.3    
94.5    
94.7    
95.0    
95.2    
95.4    
95.6    
95.8    
96.1    
96.3    
96.5    
96.7    
96.9    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.5    
98.7    
98.9    
99.1    
99.3    
99.6    
99.8    
-found 31 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 160174, rend_intergenic: 160171  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17424, rend_intergenic: 13153  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24461, rend_intergenic: 19603  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45294, rend_intergenic: 38604  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55328, rend_intergenic: 52452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61107, rend_intergenic: 56669  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68966, rend_intergenic: 61257  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89027, rend_intergenic: 71855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97509, rend_intergenic: 89157  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99781, rend_intergenic: 98075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104676, rend_intergenic: 100672  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117831, rend_intergenic: 115416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127015, rend_intergenic: 118495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130389, rend_intergenic: 127015  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134043, rend_intergenic: 130837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145019, rend_intergenic: 134258  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161719, rend_intergenic: 145034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165100, rend_intergenic: 162424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 18 predictions persist after filtering for low support