-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_5/scaffold_5_15316409-15558311

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for pasa_asmbl_45992.p1
Valid prediction for GlimmerHMM_glimmerT_13202-T1
Valid prediction for pasa_asmbl_45996.p1
Valid prediction for snap_scaffold_5-snap.2837-T1
Valid prediction for snap_scaffold_5-snap.2826-T1
Valid prediction for GlimmerHMM_glimmerT_13214-T1
Valid prediction for snap_scaffold_5-snap.2798-T1
Valid prediction for snap_scaffold_5-snap.2810-T1
Valid prediction for snap_scaffold_5-snap.2824-T1
Valid prediction for snap_scaffold_5-snap.2819-T1
Valid prediction for snap_scaffold_5-snap.2802-T1
Valid prediction for HiQ_model.g8788.t1
Couldn't classify 160322, 160483
Couldn't classify 161065, 161155
Sorry, prediction pasa_asmbl_45993.p1 fails validation.
(GGG)	 TA	160322-160483	GT	AGG
(GCT)	 AG	160627-160853	GT	AGG
(GTT)	 AG	161065-161155	GT	CTG
-recovered pasa_asmbl_45993.p1, internal, 160627, 160853
-recovered pasa_asmbl_45993.p1, internal, 161065, 161155
Valid prediction for snap_scaffold_5-snap.2811-T1
Valid prediction for Augustus_model.g8777.t1
Valid prediction for Augustus_model.g8784.t1
Valid prediction for snap_scaffold_5-snap.2839-T1
Valid prediction for GlimmerHMM_glimmerT_13207-T1
Valid prediction for snap_scaffold_5-snap.2793-T1
Valid prediction for Augustus_model.g8791.t1
Valid prediction for snap_scaffold_5-snap.2823-T1
Valid prediction for CodingQuarry_transcript_52378-T1
Valid prediction for snap_scaffold_5-snap.2840-T1
Valid prediction for CodingQuarry_transcript_52382-T1
Valid prediction for snap_scaffold_5-snap.2814-T1
Valid prediction for Augustus_model.g8789.t1
Couldn't classify 93385, 93487
Couldn't classify 94100, 94257
Sorry, prediction pasa_asmbl_45989.p1 fails validation.
(GCC)	 AG	93385-93487	GT	AGG
(GTT)	 AG	93795-93956	GT	CAG
(CCA)	 AG	94100-94257	GA	GAG
-recovered pasa_asmbl_45989.p1, internal, 93385, 93487
-recovered pasa_asmbl_45989.p1, internal, 93795, 93956
Valid prediction for CodingQuarry_transcript_52383-T1
Valid prediction for Augustus_model.g8775.t1
Couldn't classify 184234, 184378
Sorry, prediction pasa_asmbl_45998.p1 fails validation.
(GGT)	 CA	184234-184378	GT	AGG
(GTC)	 AG	184561-185391	GT	GGG
(GCC)	 AG	185577-185899	GG	AGG
-recovered pasa_asmbl_45998.p1, terminal, 185577, 185899
-recovered pasa_asmbl_45998.p1, internal, 184561, 185391
Valid prediction for snap_scaffold_5-snap.2796-T1
Couldn't classify 94631, 94731
Couldn't classify 96379, 96504
Sorry, prediction pasa_asmbl_45990.p1 fails validation.
(AGC)	 CC	94631-94731	GT	AAG
(GTG)	 AG	94905-94981	GT	AAG
(GCA)	 AG	95089-95182	GT	GGG
(GGC)	 AG	96076-96220	GT	AGG
(CCC)	 AG	96379-96504	CC	ACC
-recovered pasa_asmbl_45990.p1, internal, 94905, 94981
-recovered pasa_asmbl_45990.p1, internal, 95089, 95182
-recovered pasa_asmbl_45990.p1, internal, 96076, 96220
Valid prediction for snap_scaffold_5-snap.2817-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_13204-T1
Valid prediction for snap_scaffold_5-snap.2830-T1
Couldn't classify 91002, 91029
Couldn't classify 91728, 91823
Sorry, prediction pasa_asmbl_45988.p2 fails validation.
(AAG)	 CC	91002-91029	GT	CAG
(GCC)	 AG	91165-91445	GT	AGG
(ATC)	 AG	91728-91823	CA	CCC
-recovered pasa_asmbl_45988.p2, internal, 91165, 91445
Valid prediction for Augustus_model.g8785.t1
Valid prediction for snap_scaffold_5-snap.2818-T1
Valid prediction for Augustus_model.g8787.t1
Valid prediction for CodingQuarry_transcript_52379-T1
Valid prediction for Augustus_model.g8776.t1
Valid prediction for snap_scaffold_5-snap.2799-T1
Valid prediction for Augustus_model.g8790.t1
Valid prediction for snap_scaffold_5-snap.2825-T1
Valid prediction for GlimmerHMM_glimmerT_13205-T1
Valid prediction for snap_scaffold_5-snap.2821-T1
Valid prediction for GlimmerHMM_glimmerT_13213-T1
Valid prediction for GlimmerHMM_glimmerT_13198-T1
Valid prediction for Augustus_model.g8778.t1
Valid prediction for snap_scaffold_5-snap.2820-T1
Valid prediction for Augustus_model.g8780.t1
Valid prediction for GlimmerHMM_glimmerT_13211-T1
Valid prediction for snap_scaffold_5-snap.2835-T1
Valid prediction for Augustus_model.g8783.t1
Valid prediction for GlimmerHMM_glimmerT_13203-T1
Valid prediction for snap_scaffold_5-snap.2805-T1
Valid prediction for snap_scaffold_5-snap.2822-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_52390-T1
Valid prediction for snap_scaffold_5-snap.2838-T1
Valid prediction for snap_scaffold_5-snap.2827-T1
Valid prediction for GlimmerHMM_glimmerT_13218-T1
Valid prediction for snap_scaffold_5-snap.2834-T1
Valid prediction for GlimmerHMM_glimmerT_13216-T1
Valid prediction for snap_scaffold_5-snap.2812-T1
Valid prediction for HiQ_model.g8794.t1
Valid prediction for GlimmerHMM_glimmerT_13215-T1
Valid prediction for CodingQuarry_transcript_52381-T1
Valid prediction for HiQ_model.g8793.t1
Valid prediction for GlimmerHMM_glimmerT_13206-T1
Valid prediction for snap_scaffold_5-snap.2836-T1
Valid prediction for Augustus_model.g8782.t1
Valid prediction for snap_scaffold_5-snap.2815-T1
Valid prediction for snap_scaffold_5-snap.2828-T1
Couldn't classify 19027, 19239
Sorry, prediction pasa_asmbl_45049.p1 fails validation.
(AAG)	 AC	19027-19239	GT	AGG
(GCA)	 AG	19419-19686	GT	TGG
(TGT)	 AG	19879-20033	GC	GAG
-recovered pasa_asmbl_45049.p1, terminal, 19879, 20033
-recovered pasa_asmbl_45049.p1, internal, 19419, 19686
-recovered pasa_asmbl_45049.p1, internal, 19879, 20033
Couldn't classify 126449, 126532
Couldn't classify 135058, 135180
Sorry, prediction pasa_asmbl_44670.p1 fails validation.
(AAT)	 AG	126449-126532	GT	AGG
(GAG)	 AG	126677-126757	GT	AGG
(AAG)	 AG	126935-127011	GT	GGG
(GTG)	 AG	129123-129206	GT	ATG
(GCT)	 AG	129706-129852	GT	CGG
(TTA)	 AG	131191-131299	GT	AGG
(TAT)	 AG	131595-131671	GT	CGG
(GAC)	 AG	132357-132450	GT	AGG
(GTG)	 AG	133623-133697	GT	TGG
(GTG)	 AG	133791-133901	GT	AGG
(AAA)	 AG	134035-134184	GT	ATG
(GTG)	 AG	134722-134823	GT	GGG
(GAG)	 AG	135058-135180	AC	GGA
-recovered pasa_asmbl_44670.p1, internal, 126449, 126532
-recovered pasa_asmbl_44670.p1, internal, 126677, 126757
-recovered pasa_asmbl_44670.p1, internal, 126935, 127011
-recovered pasa_asmbl_44670.p1, internal, 129123, 129206
-recovered pasa_asmbl_44670.p1, internal, 129706, 129852
-recovered pasa_asmbl_44670.p1, internal, 131191, 131299
-recovered pasa_asmbl_44670.p1, internal, 131595, 131671
-recovered pasa_asmbl_44670.p1, internal, 132357, 132450
-recovered pasa_asmbl_44670.p1, internal, 133623, 133697
-recovered pasa_asmbl_44670.p1, internal, 133791, 133901
-recovered pasa_asmbl_44670.p1, internal, 134035, 134184
-recovered pasa_asmbl_44670.p1, internal, 134722, 134823
Valid prediction for snap_scaffold_5-snap.2795-T1
Couldn't classify 135816, 135885
Sorry, prediction pasa_asmbl_44665.p1 fails validation.
(CCC)	 CA	135816-135885	GT	TGG
(CTA)	 AG	135975-136099	GT	AGG
(GAA)	 AG	136302-136504	GT	AAG
(GTT)	 AG	136616-136919	GT	AAG
(ATC)	 AG	137014-137094	GT	TGG
(CTG)	 AG	137227-137356	GT	AGG
(TGT)	 AG	137538-137698	GT	AGG
(GAG)	 AG	137874-137975	GT	AGG
(GAC)	 AG	138660-138752	GT	AGG
(GTC)	 AG	138902-139025	GT	AGG
(ATC)	 AG	141665-141729	AC	AAA
-recovered pasa_asmbl_44665.p1, terminal, 141665, 141729
-recovered pasa_asmbl_44665.p1, internal, 135975, 136099
-recovered pasa_asmbl_44665.p1, internal, 136302, 136504
-recovered pasa_asmbl_44665.p1, internal, 136616, 136919
-recovered pasa_asmbl_44665.p1, internal, 137014, 137094
-recovered pasa_asmbl_44665.p1, internal, 137227, 137356
-recovered pasa_asmbl_44665.p1, internal, 137538, 137698
-recovered pasa_asmbl_44665.p1, internal, 137874, 137975
-recovered pasa_asmbl_44665.p1, internal, 138660, 138752
-recovered pasa_asmbl_44665.p1, internal, 138902, 139025
Valid prediction for GlimmerHMM_glimmerT_13212-T1
Valid prediction for Augustus_model.g8798.t1
Valid prediction for GlimmerHMM_glimmerT_13220-T1
Valid prediction for snap_scaffold_5-snap.2831-T1
Couldn't classify 9147, 9287
Sorry, prediction pasa_asmbl_44698.p1 fails validation.
(CAC)	 TA	9147-9287	GT	TGG
(GCA)	 AG	9501-10119	GT	GAG
(TCA)	 AG	11230-11328	GT	GGG
(GAC)	 AG	11438-11511	GT	AGG
(GGC)	 AG	11622-11821	GT	AGG
(GGT)	 AG	11936-12027	GT	TGG
(CGT)	 AG	12119-12288	GT	AGG
(GTG)	 AG	12373-12567	CC	GAC
add_exon() Sorry, pasa_asmbl_44698.p1 9501-10119-terminal-3 is invalid.
-recovered pasa_asmbl_44698.p1, terminal, 9501, 10119
-recovered pasa_asmbl_44698.p1, terminal, 12373, 12567
-recovered pasa_asmbl_44698.p1, internal, 9501, 10119
-recovered pasa_asmbl_44698.p1, internal, 11230, 11328
-recovered pasa_asmbl_44698.p1, internal, 11438, 11511
-recovered pasa_asmbl_44698.p1, internal, 11622, 11821
-recovered pasa_asmbl_44698.p1, internal, 11936, 12027
-recovered pasa_asmbl_44698.p1, internal, 12119, 12288
Couldn't classify 4210, 4707
Sorry, prediction pasa_asmbl_44702.p1 fails validation.
(AGC)	 TC	4210-4707	AG	CCA
Valid prediction for pasa_asmbl_44683.p1
Valid prediction for Augustus_model.g8799.t1
Valid prediction for CodingQuarry_transcript_52385-T1
Valid prediction for pasa_asmbl_44686.p1
Valid prediction for snap_scaffold_5-snap.2801-T1
Valid prediction for Augustus_model.g8774.t1
Valid prediction for GlimmerHMM_glimmerT_13219-T1
Valid prediction for pasa_asmbl_44680.p1
Valid prediction for snap_scaffold_5-snap.2809-T1
Valid prediction for GlimmerHMM_glimmerT_13222-T1
Valid prediction for snap_scaffold_5-snap.2808-T1
Valid prediction for GlimmerHMM_glimmerT_13217-T1
Valid prediction for snap_scaffold_5-snap.2807-T1
Valid prediction for pasa_asmbl_44690.p1
Valid prediction for GlimmerHMM_glimmerT_13223-T1
Valid prediction for snap_scaffold_5-snap.2797-T1
Valid prediction for GlimmerHMM_glimmerT_13210-T1
Valid prediction for HiQ_model.g8795.t1
Valid prediction for GlimmerHMM_glimmerT_13200-T1
Valid prediction for CodingQuarry_transcript_52380-T1
Valid prediction for snap_scaffold_5-snap.2800-T1
Valid prediction for GlimmerHMM_glimmerT_13199-T1
Valid prediction for CodingQuarry_transcript_52389-T1
Valid prediction for snap_scaffold_5-snap.2804-T1
Valid prediction for snap_scaffold_5-snap.2813-T1
Valid prediction for snap_scaffold_5-snap.2829-T1
Valid prediction for snap_scaffold_5-snap.2833-T1
Valid prediction for GlimmerHMM_glimmerT_13208-T1
Valid prediction for snap_scaffold_5-snap.2794-T1
Valid prediction for CodingQuarry_transcript_52388-T1
Valid prediction for Augustus_model.g8786.t1
Valid prediction for HiQ_model.g8796.t1
Couldn't classify 105183, 105191
Couldn't classify 106776, 106805
Sorry, prediction pasa_asmbl_44674.p1 fails validation.
(ATA)	 CC	105183-105191	GT	GGG
(GTG)	 AG	105338-105523	GT	AGG
(GGA)	 AG	105626-105802	GT	AGG
(GTG)	 AG	106153-106235	GT	AGG
(GTT)	 AG	106349-106397	GT	AGG
(TGG)	 AG	106484-106573	GT	AGG
(GTC)	 AG	106776-106805	CA	ACC
-recovered pasa_asmbl_44674.p1, internal, 105338, 105523
-recovered pasa_asmbl_44674.p1, internal, 105626, 105802
-recovered pasa_asmbl_44674.p1, internal, 106153, 106235
-recovered pasa_asmbl_44674.p1, internal, 106349, 106397
-recovered pasa_asmbl_44674.p1, internal, 106484, 106573
Couldn't classify 7864, 8253
Sorry, prediction pasa_asmbl_44700.p2 fails validation.
(ATG)	 CC	7864-8253	AG	CCA
Valid prediction for Augustus_model.g8797.t1
Couldn't classify 15350, 15520
Couldn't classify 18608, 18750
Sorry, prediction pasa_asmbl_44694.p1 fails validation.
(TAC)	 GG	15350-15520	GT	CGG
(ATG)	 AG	15769-15853	GT	TGG
(ATA)	 AG	16051-16127	GT	AGG
(ACT)	 AG	16251-16458	GT	AGG
(GGT)	 AG	16548-16643	GT	AGG
(ACA)	 AG	16731-16847	GT	AGG
(ACA)	 AG	16944-17003	GT	CTG
(TGT)	 AG	17087-17392	GT	AGG
(GTT)	 AG	17529-17609	GT	AGG
(AAA)	 AG	17719-17829	GT	TGG
(AGG)	 AG	18167-18327	GT	AGG
(TGT)	 AG	18416-18515	GT	AGG
(GTG)	 AG	18608-18750	CA	TGC
-recovered pasa_asmbl_44694.p1, initial, 15769, 15853
-recovered pasa_asmbl_44694.p1, internal, 15769, 15853
-recovered pasa_asmbl_44694.p1, internal, 16051, 16127
-recovered pasa_asmbl_44694.p1, internal, 16251, 16458
-recovered pasa_asmbl_44694.p1, internal, 16548, 16643
-recovered pasa_asmbl_44694.p1, internal, 16731, 16847
-recovered pasa_asmbl_44694.p1, internal, 16944, 17003
-recovered pasa_asmbl_44694.p1, internal, 17087, 17392
-recovered pasa_asmbl_44694.p1, internal, 17529, 17609
-recovered pasa_asmbl_44694.p1, internal, 17719, 17829
-recovered pasa_asmbl_44694.p1, internal, 18167, 18327
-recovered pasa_asmbl_44694.p1, internal, 18416, 18515
Valid prediction for Augustus_model.g8779.t1
Valid prediction for GlimmerHMM_glimmerT_13201-T1
Valid prediction for snap_scaffold_5-snap.2816-T1
Valid prediction for CodingQuarry_transcript_52387-T1
Couldn't classify 106776, 106871
Sorry, prediction pasa_asmbl_44672.p1 fails validation.
(GTC)	 AG	106776-106871	GT	CGG
(TTG)	 AG	107083-107154	GT	AGG
(GTG)	 AG	107267-107353	GT	AGG
(CTC)	 AG	107697-107843	GT	AGG
(ATC)	 AG	108133-108275	GT	GCG
(GGG)	 AG	108590-108685	GT	AGG
(GGG)	 AG	108935-109066	GT	AGG
(ATT)	 AG	109268-109373	GT	AGG
(GTG)	 AG	109455-109504	GT	TGG
(GTA)	 AG	109659-109686	AA	AGA
-recovered pasa_asmbl_44672.p1, terminal, 109659, 109686
-recovered pasa_asmbl_44672.p1, internal, 106776, 106871
-recovered pasa_asmbl_44672.p1, internal, 107083, 107154
-recovered pasa_asmbl_44672.p1, internal, 107267, 107353
-recovered pasa_asmbl_44672.p1, internal, 107697, 107843
-recovered pasa_asmbl_44672.p1, internal, 108133, 108275
-recovered pasa_asmbl_44672.p1, internal, 108590, 108685
-recovered pasa_asmbl_44672.p1, internal, 108935, 109066
-recovered pasa_asmbl_44672.p1, internal, 109268, 109373
-recovered pasa_asmbl_44672.p1, internal, 109455, 109504
Valid prediction for GlimmerHMM_glimmerT_13221-T1
Valid prediction for snap_scaffold_5-snap.2832-T1
Valid prediction for snap_scaffold_5-snap.2806-T1
Valid prediction for snap_scaffold_5-snap.2803-T1
Valid prediction for HiQ_model.g8781.t1
Valid prediction for GlimmerHMM_glimmerT_13209-T1
Valid prediction for Augustus_model.g8792.t1
Couldn't classify 23328, 23348
Sorry, prediction pasa_asmbl_44692.p1 fails validation.
(AAA)	 TC	23328-23348	GT	AGG
(GGT)	 AG	23483-23515	GT	AGG
(GAG)	 AG	25602-25707	GT	CCG
(ACA)	 AG	25905-26025	GT	GGG
(GTA)	 AG	26114-26176	GT	AAG
(GGT)	 AG	26267-26327	GT	CAG
(CTG)	 AG	26538-26624	GT	AGG
(CTG)	 AG	26896-26952	GT	ATG
(GAG)	 AG	27099-27202	GT	AGG
(CCG)	 AG	27314-27379	GT	AGG
(GTG)	 AG	27468-27519	GT	TGG
(GTG)	 AG	27631-27678	GT	AGG
(ATG)	 AG	27760-27795	GT	AGG
(CCT)	 AG	27889-27940	GT	CAG
(TGC)	 AG	28875-29062	AT	AGA
-recovered pasa_asmbl_44692.p1, initial, 27760, 27795
-recovered pasa_asmbl_44692.p1, terminal, 28875, 29062
-recovered pasa_asmbl_44692.p1, internal, 23483, 23515
-recovered pasa_asmbl_44692.p1, internal, 25602, 25707
-recovered pasa_asmbl_44692.p1, internal, 25905, 26025
-recovered pasa_asmbl_44692.p1, internal, 26114, 26176
-recovered pasa_asmbl_44692.p1, internal, 26267, 26327
-recovered pasa_asmbl_44692.p1, internal, 26538, 26624
-recovered pasa_asmbl_44692.p1, internal, 26896, 26952
-recovered pasa_asmbl_44692.p1, internal, 27099, 27202
-recovered pasa_asmbl_44692.p1, internal, 27314, 27379
-recovered pasa_asmbl_44692.p1, internal, 27468, 27519
-recovered pasa_asmbl_44692.p1, internal, 27631, 27678
-recovered pasa_asmbl_44692.p1, internal, 27760, 27795
-recovered pasa_asmbl_44692.p1, internal, 27889, 27940

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 35025, rend_intergenic: 31127  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44575, rend_intergenic: 41451  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53852, rend_intergenic: 46488  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73558, rend_intergenic: 54356  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73746, rend_intergenic: 73637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96516, rend_intergenic: 75973  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115504, rend_intergenic: 113477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122233, rend_intergenic: 117416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138898, rend_intergenic: 133620  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186883, rend_intergenic: 179653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191745, rend_intergenic: 189016  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218612, rend_intergenic: 212776  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227042, rend_intergenic: 221905  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 240114, rend_intergenic: 229344  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 241903
-exon list size: 702


building trellis

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10.4    
10.5    
10.7    
10.8    
10.9    
11.1    
11.2    
11.4    
11.5    
11.6    
11.8    
11.9    
12.1    
12.2    
12.4    
12.5    
12.6    
12.8    
12.9    
13.1    
13.2    
13.4    
13.5    
13.6    
13.8    
13.9    
14.1    
14.2    
14.3    
14.5    
14.6    
14.8    
14.9    
15.1    
15.2    
15.3    
15.5    
15.6    
15.8    
15.9    
16.1    
16.2    
16.3    
16.5    
16.6    
16.8    
16.9    
17.0    
17.2    
17.3    
17.5    
17.6    
17.8    
17.9    
18.0    
18.2    
18.3    
18.5    
18.6    
18.8    
18.9    
19.0    
19.2    
19.3    
19.5    
19.6    
19.7    
19.9    
20.0    
20.2    
20.3    
20.5    
20.6    
20.7    
20.9    
21.0    
21.2    
21.3    
21.4    
21.6    
21.7    
21.9    
22.0    
22.2    
22.3    
22.4    
22.6    
22.7    
22.9    
23.0    
23.2    
23.3    
23.4    
23.6    
23.7    
23.9    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.1    
25.3    
25.4    
25.6    
25.7    
25.9    
26.0    
26.1    
26.3    
26.4    
26.6    
26.7    
26.8    
27.0    
27.1    
27.3    
27.4    
27.6    
27.7    
27.8    
28.0    
28.1    
28.3    
28.4    
28.6    
28.7    
28.8    
29.0    
29.1    
29.3    
29.4    
29.5    
29.7    
29.8    
30.0    
30.1    
30.3    
30.4    
30.5    
30.7    
30.8    
31.0    
31.1    
31.2    
31.4    
31.5    
31.7    
31.8    
32.0    
32.1    
32.2    
32.4    
32.5    
32.7    
32.8    
33.0    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
33.9    
34.1    
34.2    
34.4    
34.5    
34.7    
34.8    
34.9    
35.1    
35.2    
35.4    
35.5    
35.7    
35.8    
35.9    
36.1    
36.2    
36.4    
36.5    
36.6    
36.8    
36.9    
37.1    
37.2    
37.4    
37.5    
37.6    
37.8    
37.9    
38.1    
38.2    
38.4    
38.5    
38.6    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.8    
39.9    
40.1    
40.2    
40.3    
40.5    
40.6    
40.8    
40.9    
41.1    
41.2    
41.3    
41.5    
41.6    
41.8    
41.9    
42.0    
42.2    
42.3    
42.5    
42.6    
42.8    
42.9    
43.0    
43.2    
43.3    
43.5    
43.6    
43.8    
43.9    
44.0    
44.2    
44.3    
44.5    
44.6    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.7    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.4    
48.6    
48.7    
48.9    
49.0    
49.1    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.9    
51.0    
51.1    
51.3    
51.4    
51.6    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
56.0    
56.1    
56.2    
56.4    
56.5    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.1    
62.2    
62.4    
62.5    
62.6    
62.8    
62.9    
63.1    
63.2    
63.4    
63.5    
63.6    
63.8    
63.9    
64.1    
64.2    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.2    
65.3    
65.5    
65.6    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.5    
67.6    
67.8    
67.9    
68.0    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.9    
72.0    
72.2    
72.3    
72.4    
72.6    
72.7    
72.9    
73.0    
73.2    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.6    
77.7    
77.8    
78.0    
78.1    
78.3    
78.4    
78.6    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.5    
79.7    
79.8    
80.0    
80.1    
80.3    
80.4    
80.5    
80.7    
80.8    
81.0    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
83.9    
84.1    
84.2    
84.4    
84.5    
84.7    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.7    
85.8    
85.9    
86.1    
86.2    
86.4    
86.5    
86.6    
86.8    
86.9    
87.1    
87.2    
87.4    
87.5    
87.6    
87.8    
87.9    
88.1    
88.2    
88.4    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.8    
89.9    
90.1    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.8    
91.9    
92.0    
92.2    
92.3    
92.5    
92.6    
92.8    
92.9    
93.0    
93.2    
93.3    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.2    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.4    
97.6    
97.7    
97.9    
98.0    
98.2    
98.3    
98.4    
98.6    
98.7    
98.9    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 26 predictions from path traversal
Error with prediction: snap lend_intergenic: 35025, rend_intergenic: 31127  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44575, rend_intergenic: 41451  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53852, rend_intergenic: 46488  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73558, rend_intergenic: 54356  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73746, rend_intergenic: 73637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96516, rend_intergenic: 75973  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115504, rend_intergenic: 113477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122233, rend_intergenic: 117416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138898, rend_intergenic: 133620  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186883, rend_intergenic: 179653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191745, rend_intergenic: 189016  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218612, rend_intergenic: 212776  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227042, rend_intergenic: 221905  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 240114, rend_intergenic: 229344  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support