-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_5/scaffold_5_138800-364853 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_11313-T1 Valid prediction for GlimmerHMM_glimmerT_11321-T1 Valid prediction for Augustus_model.g7404.t1 Valid prediction for snap_scaffold_5-snap.58-T1 Couldn't classify 44023, 44155 Sorry, prediction pasa_asmbl_45086.p1 fails validation. (GGG) TG 44023-44155 GT AGG (CCA) AG 44302-44430 GT GGG (ACC) AG 44513-44602 GT TGG (GGA) AG 44952-45029 GT AGG (ACT) AG 46481-46555 GT TGG (CCT) AG 46846-47014 GT AGG (GGT) AG 47388-47456 GT AGG (ATG) AG 48265-48294 GT AAG (GGT) AG 49186-49330 AC AGA add_exon() Sorry, pasa_asmbl_45086.p1 48265-48294-initial-1 is invalid. -recovered pasa_asmbl_45086.p1, initial, 48265, 48294 add_exon() Sorry, pasa_asmbl_45086.p1 48265-48294-terminal-1 is invalid. -recovered pasa_asmbl_45086.p1, terminal, 48265, 48294 -recovered pasa_asmbl_45086.p1, terminal, 49186, 49330 -recovered pasa_asmbl_45086.p1, internal, 44302, 44430 -recovered pasa_asmbl_45086.p1, internal, 44513, 44602 -recovered pasa_asmbl_45086.p1, internal, 44952, 45029 -recovered pasa_asmbl_45086.p1, internal, 46481, 46555 -recovered pasa_asmbl_45086.p1, internal, 46846, 47014 -recovered pasa_asmbl_45086.p1, internal, 47388, 47456 -recovered pasa_asmbl_45086.p1, internal, 48265, 48294 Valid prediction for snap_scaffold_5-snap.83-T1 Valid prediction for snap_scaffold_5-snap.52-T1 Valid prediction for snap_scaffold_5-snap.61-T1 Valid prediction for GlimmerHMM_glimmerT_11317-T1 Valid prediction for Augustus_model.g7415.t1 Valid prediction for snap_scaffold_5-snap.43-T1 Valid prediction for snap_scaffold_5-snap.59-T1 Valid prediction for snap_scaffold_5-snap.64-T1 Valid prediction for snap_scaffold_5-snap.50-T1 Valid prediction for GlimmerHMM_glimmerT_11336-T1 Valid prediction for CodingQuarry_transcript_51962-T1 Valid prediction for snap_scaffold_5-snap.63-T1 Valid prediction for Augustus_model.g7411.t1 Valid prediction for GlimmerHMM_glimmerT_11334-T1 Valid prediction for GlimmerHMM_glimmerT_11318-T1 Valid prediction for snap_scaffold_5-snap.69-T1 Valid prediction for snap_scaffold_5-snap.36-T1 Valid prediction for snap_scaffold_5-snap.34-T1 Valid prediction for snap_scaffold_5-snap.78-T1 Valid prediction for Augustus_model.g7401.t1 Valid prediction for GlimmerHMM_glimmerT_11326-T1 Valid prediction for Augustus_model.g7403.t1 Valid prediction for GlimmerHMM_glimmerT_11320-T1 Valid prediction for snap_scaffold_5-snap.32-T1 Valid prediction for snap_scaffold_5-snap.33-T1 Valid prediction for snap_scaffold_5-snap.48-T1 Valid prediction for snap_scaffold_5-snap.74-T1 Valid prediction for snap_scaffold_5-snap.41-T1 Valid prediction for snap_scaffold_5-snap.46-T1 Valid prediction for GlimmerHMM_glimmerT_11316-T1 Couldn't classify 41011, 41337 Sorry, prediction pasa_asmbl_45084.p2 fails validation. (GGG) GC 41011-41337 CC GAC Valid prediction for pasa_asmbl_45091.p1 Valid prediction for snap_scaffold_5-snap.55-T1 Valid prediction for GlimmerHMM_glimmerT_11338-T1 Valid prediction for snap_scaffold_5-snap.65-T1 Couldn't classify 41649, 41661 Couldn't classify 42801, 43068 Sorry, prediction pasa_asmbl_45085.p1 fails validation. (TGC) CC 41649-41661 GT TGG (AGA) AG 41954-42119 GT AGG (CCT) AG 42801-43068 CC AGC -recovered pasa_asmbl_45085.p1, internal, 41954, 42119 Valid prediction for pasa_asmbl_46387.p1 Valid prediction for GlimmerHMM_glimmerT_11340-T1 Valid prediction for CodingQuarry_transcript_51959-T1 Valid prediction for GlimmerHMM_glimmerT_11339-T1 Valid prediction for snap_scaffold_5-snap.80-T1 Valid prediction for GlimmerHMM_glimmerT_11332-T1 Couldn't classify 40287, 40775 Sorry, prediction pasa_asmbl_45083.p1 fails validation. (GAC) CA 40287-40775 GT AGG Valid prediction for HiQ_model.g7416.t1 Valid prediction for snap_scaffold_5-snap.30-T1 Valid prediction for GlimmerHMM_glimmerT_11337-T1 Valid prediction for GlimmerHMM_glimmerT_11342-T1 Couldn't classify 35312, 35340 Couldn't classify 38092, 38170 Sorry, prediction pasa_asmbl_45082.p1 fails validation. (TAC) CC 35312-35340 GT AGG (GAG) AG 35533-35716 GT TGG (CTG) AG 35987-36037 GT AGG (GTG) AG 36130-36252 GT AGG (GGT) AG 36595-36659 GT GGG (AGC) AG 37148-37231 GT AGG (GTA) AG 37357-37469 GT AGG (GGT) AG 37783-37843 GT TAG (TGA) AG 38092-38170 AG TGA -recovered pasa_asmbl_45082.p1, internal, 35533, 35716 -recovered pasa_asmbl_45082.p1, internal, 35987, 36037 -recovered pasa_asmbl_45082.p1, internal, 36130, 36252 -recovered pasa_asmbl_45082.p1, internal, 36595, 36659 -recovered pasa_asmbl_45082.p1, internal, 37148, 37231 -recovered pasa_asmbl_45082.p1, internal, 37357, 37469 -recovered pasa_asmbl_45082.p1, internal, 37783, 37843 Valid prediction for snap_scaffold_5-snap.71-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_51960-T1 Valid prediction for GlimmerHMM_glimmerT_11325-T1 Valid prediction for snap_scaffold_5-snap.45-T1 Valid prediction for Augustus_model.g7402.t1 Valid prediction for snap_scaffold_5-snap.75-T1 Valid prediction for Augustus_model.g7409.t1 Valid prediction for GlimmerHMM_glimmerT_11328-T1 Valid prediction for snap_scaffold_5-snap.42-T1 Valid prediction for pasa_asmbl_43759.p1 Valid prediction for GlimmerHMM_glimmerT_11329-T1 Valid prediction for GlimmerHMM_glimmerT_11319-T1 Couldn't classify 125399, 125477 Sorry, prediction pasa_asmbl_43763.p1 fails validation. (CAG) TT 125399-125477 GT GGG (GTG) AG 127353-127490 GT CAG (GTA) AG 127784-127926 GT AGG (ATG) AG 128242-128340 GT CGG (ATT) AG 129113-129262 CC GAC -recovered pasa_asmbl_43763.p1, initial, 128242, 128340 -recovered pasa_asmbl_43763.p1, terminal, 129113, 129262 -recovered pasa_asmbl_43763.p1, internal, 127353, 127490 -recovered pasa_asmbl_43763.p1, internal, 127784, 127926 -recovered pasa_asmbl_43763.p1, internal, 128242, 128340 Valid prediction for snap_scaffold_5-snap.56-T1 Valid prediction for snap_scaffold_5-snap.66-T1 Valid prediction for snap_scaffold_5-snap.72-T1 Valid prediction for Augustus_model.g7407.t1 Valid prediction for snap_scaffold_5-snap.54-T1 Valid prediction for snap_scaffold_5-snap.35-T1 Valid prediction for snap_scaffold_5-snap.82-T1 Valid prediction for snap_scaffold_5-snap.68-T1 Valid prediction for snap_scaffold_5-snap.77-T1 Valid prediction for snap_scaffold_5-snap.81-T1 Valid prediction for CodingQuarry_transcript_51961-T1 Valid prediction for snap_scaffold_5-snap.49-T1 Valid prediction for GlimmerHMM_glimmerT_11323-T1 Valid prediction for HiQ_model.g7408.t1 Valid prediction for GlimmerHMM_glimmerT_11324-T1 Valid prediction for HiQ_model.g7406.t1 Valid prediction for GlimmerHMM_glimmerT_11333-T1 Valid prediction for snap_scaffold_5-snap.37-T1 Valid prediction for GlimmerHMM_glimmerT_11331-T1 Valid prediction for snap_scaffold_5-snap.38-T1 Valid prediction for snap_scaffold_5-snap.39-T1 Valid prediction for snap_scaffold_5-snap.73-T1 Valid prediction for snap_scaffold_5-snap.57-T1 Valid prediction for GlimmerHMM_glimmerT_11335-T1 Couldn't classify 9842, 9961 Sorry, prediction pasa_asmbl_43771.p1 fails validation. (ATG) CC 6783-8189 GT AGG (GCG) AG 8426-8527 GT AGG (AAG) AG 8869-8991 GT AGG (CTG) AG 9842-9961 TA AGT -recovered pasa_asmbl_43771.p1, initial, 6783, 8189 -recovered pasa_asmbl_43771.p1, internal, 8426, 8527 -recovered pasa_asmbl_43771.p1, internal, 8869, 8991 Valid prediction for Augustus_model.g7417.t1 Couldn't classify 4327, 4455 Sorry, prediction pasa_asmbl_43772.p1 fails validation. (CTG) GT 4327-4455 GT AGG (GTG) AG 4581-4775 GG GAG -recovered pasa_asmbl_43772.p1, terminal, 4581, 4775 Valid prediction for CodingQuarry_transcript_51957-T1 Valid prediction for GlimmerHMM_glimmerT_11343-T1 Valid prediction for GlimmerHMM_glimmerT_11330-T1 Valid prediction for HiQ_model.g7405.t1 Valid prediction for snap_scaffold_5-snap.47-T1 Valid prediction for snap_scaffold_5-snap.53-T1 Valid prediction for GlimmerHMM_glimmerT_11314-T1 Valid prediction for HiQ_model.g7410.t1 Valid prediction for Augustus_model.g7418.t1 Valid prediction for CodingQuarry_transcript_51958-T1 Valid prediction for snap_scaffold_5-snap.70-T1 Valid prediction for GlimmerHMM_glimmerT_11322-T1 Valid prediction for snap_scaffold_5-snap.76-T1 Valid prediction for GlimmerHMM_glimmerT_11341-T1 Couldn't classify 115754, 116269 Sorry, prediction pasa_asmbl_43766.p1 fails validation. (AAG) GG 115754-116269 CT GAC Valid prediction for pasa_asmbl_44928.p3 Valid prediction for GlimmerHMM_glimmerT_11315-T1 Valid prediction for snap_scaffold_5-snap.79-T1 Valid prediction for snap_scaffold_5-snap.40-T1 Valid prediction for Augustus_model.g7412.t1 Valid prediction for snap_scaffold_5-snap.62-T1 Valid prediction for snap_scaffold_5-snap.60-T1 Valid prediction for snap_scaffold_5-snap.29-T1 Couldn't classify 156758, 156929 Sorry, prediction pasa_asmbl_43758.p1 fails validation. (GCT) CG 156758-156929 GT ATG (GTC) AG 157429-157499 GT AGG (AAA) AG 157621-157701 GT CAG (GCC) AG 157908-158066 GT AGG (GAT) AG 159052-159195 GT AGG (GGC) AG 159308-159463 GT AGG (GTG) AG 159937-160158 GT AGG (ATC) AG 160380-160509 GT TGG (GAG) AG 160967-161124 GT AGG (GTA) AG 161380-161509 GT TGG (GTC) AG 162097-162260 GC AGG -recovered pasa_asmbl_43758.p1, terminal, 162097, 162260 -recovered pasa_asmbl_43758.p1, internal, 157429, 157499 -recovered pasa_asmbl_43758.p1, internal, 157621, 157701 -recovered pasa_asmbl_43758.p1, internal, 157908, 158066 -recovered pasa_asmbl_43758.p1, internal, 159052, 159195 -recovered pasa_asmbl_43758.p1, internal, 159308, 159463 -recovered pasa_asmbl_43758.p1, internal, 159937, 160158 -recovered pasa_asmbl_43758.p1, internal, 160380, 160509 -recovered pasa_asmbl_43758.p1, internal, 160967, 161124 -recovered pasa_asmbl_43758.p1, internal, 161380, 161509 -recovered pasa_asmbl_43758.p1, internal, 162097, 162260 Valid prediction for Augustus_model.g7414.t1 Valid prediction for snap_scaffold_5-snap.67-T1 Valid prediction for snap_scaffold_5-snap.31-T1 Valid prediction for snap_scaffold_5-snap.51-T1 Valid prediction for snap_scaffold_5-snap.44-T1 Valid prediction for GlimmerHMM_glimmerT_11327-T1 Valid prediction for Augustus_model.g7413.t1 Couldn't classify 106552, 106570 Sorry, prediction pasa_asmbl_43769.p1 fails validation. (CTG) AA 106552-106570 GT CGG (AGG) AG 106970-107097 GT AGG (GCT) AG 107267-107362 GT AGG (GGC) AG 107869-107997 GA AGG -recovered pasa_asmbl_43769.p1, terminal, 107869, 107997 -recovered pasa_asmbl_43769.p1, internal, 106970, 107097 -recovered pasa_asmbl_43769.p1, internal, 107267, 107362 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10869, rend_intergenic: 7090 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13206, rend_intergenic: 11475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 23432, rend_intergenic: 13315 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29864, rend_intergenic: 27727 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32587, rend_intergenic: 29921 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49330, rend_intergenic: 32640 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65120, rend_intergenic: 58917 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69261, rend_intergenic: 65268 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72385, rend_intergenic: 70791 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 78284, rend_intergenic: 72536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89357, rend_intergenic: 84557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95864, rend_intergenic: 90498 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 98685, rend_intergenic: 96902 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103901, rend_intergenic: 99249 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107607, rend_intergenic: 106650 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111271, rend_intergenic: 108473 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118423, rend_intergenic: 117676 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128939, rend_intergenic: 118661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156643, rend_intergenic: 143067 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 161535, rend_intergenic: 158754 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165778, rend_intergenic: 164652 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179640, rend_intergenic: 165936 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185487, rend_intergenic: 179900 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192933, rend_intergenic: 185699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 198452, rend_intergenic: 197216 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205776, rend_intergenic: 201237 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218288, rend_intergenic: 210410 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 224188, rend_intergenic: 221661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 42941, rend_intergenic: 42938 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 226054 -exon list size: 496 building trellis 0.2 0.4 0.6 0.8 1.0 1.2 1.4 1.6 1.8 2.0 2.2 2.4 2.6 2.8 3.0 3.2 3.4 3.6 3.8 4.0 4.2 4.4 4.6 4.8 5.0 5.2 5.4 5.6 5.8 6.0 6.2 6.4 6.6 6.8 7.0 7.2 7.4 7.6 7.8 8.0 8.2 8.4 8.6 8.8 9.0 9.2 9.4 9.6 9.8 10.0 10.2 10.4 10.6 10.8 11.0 11.2 11.4 11.6 11.8 12.0 12.2 12.4 12.7 12.9 13.1 13.3 13.5 13.7 13.9 14.1 14.3 14.5 14.7 14.9 15.1 15.3 15.5 15.7 15.9 16.1 16.3 16.5 16.7 16.9 17.1 17.3 17.5 17.7 17.9 18.1 18.3 18.5 18.7 18.9 19.1 19.3 19.5 19.7 19.9 20.1 20.3 20.5 20.7 20.9 21.1 21.3 21.5 21.7 21.9 22.1 22.3 22.5 22.7 22.9 23.1 23.3 23.5 23.7 23.9 24.1 24.3 24.5 24.7 24.9 25.1 25.3 25.5 25.7 25.9 26.1 26.3 26.5 26.7 26.9 27.1 27.3 27.5 27.7 27.9 28.1 28.3 28.5 28.7 28.9 29.1 29.3 29.5 29.7 29.9 30.1 30.3 30.5 30.7 30.9 31.1 31.3 31.5 31.7 31.9 32.1 32.3 32.5 32.7 32.9 33.1 33.3 33.5 33.7 33.9 34.1 34.3 34.5 34.7 34.9 35.1 35.3 35.5 35.7 35.9 36.1 36.3 36.5 36.7 36.9 37.1 37.3 37.6 37.8 38.0 38.2 38.4 38.6 38.8 39.0 39.2 39.4 39.6 39.8 40.0 40.2 40.4 40.6 40.8 41.0 41.2 41.4 41.6 41.8 42.0 42.2 42.4 42.6 42.8 43.0 43.2 43.4 43.6 43.8 44.0 44.2 44.4 44.6 44.8 45.0 45.2 45.4 45.6 45.8 46.0 46.2 46.4 46.6 46.8 47.0 47.2 47.4 47.6 47.8 48.0 48.2 48.4 48.6 48.8 49.0 49.2 49.4 49.6 49.8 50.0 50.2 50.4 50.6 50.8 51.0 51.2 51.4 51.6 51.8 52.0 52.2 52.4 52.6 52.8 53.0 53.2 53.4 53.6 53.8 54.0 54.2 54.4 54.6 54.8 55.0 55.2 55.4 55.6 55.8 56.0 56.2 56.4 56.6 56.8 57.0 57.2 57.4 57.6 57.8 58.0 58.2 58.4 58.6 58.8 59.0 59.2 59.4 59.6 59.8 60.0 60.2 60.4 60.6 60.8 61.0 61.2 61.4 61.6 61.8 62.0 62.2 62.4 62.7 62.9 63.1 63.3 63.5 63.7 63.9 64.1 64.3 64.5 64.7 64.9 65.1 65.3 65.5 65.7 65.9 66.1 66.3 66.5 66.7 66.9 67.1 67.3 67.5 67.7 67.9 68.1 68.3 68.5 68.7 68.9 69.1 69.3 69.5 69.7 69.9 70.1 70.3 70.5 70.7 70.9 71.1 71.3 71.5 71.7 71.9 72.1 72.3 72.5 72.7 72.9 73.1 73.3 73.5 73.7 73.9 74.1 74.3 74.5 74.7 74.9 75.1 75.3 75.5 75.7 75.9 76.1 76.3 76.5 76.7 76.9 77.1 77.3 77.5 77.7 77.9 78.1 78.3 78.5 78.7 78.9 79.1 79.3 79.5 79.7 79.9 80.1 80.3 80.5 80.7 80.9 81.1 81.3 81.5 81.7 81.9 82.1 82.3 82.5 82.7 82.9 83.1 83.3 83.5 83.7 83.9 84.1 84.3 84.5 84.7 84.9 85.1 85.3 85.5 85.7 85.9 86.1 86.3 86.5 86.7 86.9 87.1 87.3 87.6 87.8 88.0 88.2 88.4 88.6 88.8 89.0 89.2 89.4 89.6 89.8 90.0 90.2 90.4 90.6 90.8 91.0 91.2 91.4 91.6 91.8 92.0 92.2 92.4 92.6 92.8 93.0 93.2 93.4 93.6 93.8 94.0 94.2 94.4 94.6 94.8 95.0 95.2 95.4 95.6 95.8 96.0 96.2 96.4 96.6 96.8 97.0 97.2 97.4 97.6 97.8 98.0 98.2 98.4 98.6 98.8 99.0 99.2 99.4 99.6 99.8 -found 35 predictions from path traversal Error with prediction: snap lend_intergenic: 10869, rend_intergenic: 7090 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 13206, rend_intergenic: 11475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 23432, rend_intergenic: 13315 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29864, rend_intergenic: 27727 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32587, rend_intergenic: 29921 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49330, rend_intergenic: 32640 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65120, rend_intergenic: 58917 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69261, rend_intergenic: 65268 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72385, rend_intergenic: 70791 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 78284, rend_intergenic: 72536 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89357, rend_intergenic: 84557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95864, rend_intergenic: 90498 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 98685, rend_intergenic: 96902 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103901, rend_intergenic: 99249 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107607, rend_intergenic: 106650 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 111271, rend_intergenic: 108473 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118423, rend_intergenic: 117676 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 128939, rend_intergenic: 118661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156643, rend_intergenic: 143067 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 161535, rend_intergenic: 158754 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165778, rend_intergenic: 164652 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179640, rend_intergenic: 165936 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185487, rend_intergenic: 179900 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192933, rend_intergenic: 185699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 198452, rend_intergenic: 197216 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205776, rend_intergenic: 201237 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218288, rend_intergenic: 210410 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 224188, rend_intergenic: 221661 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 42941, rend_intergenic: 42938 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 28 predictions persist after filtering for low support