-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_5/scaffold_5_11254462-11507589

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g8381.t1
Valid prediction for pasa_asmbl_45740.p1
Valid prediction for Augustus_model.g8374.t1
Valid prediction for GlimmerHMM_glimmerT_12648-T1
Valid prediction for snap_scaffold_5-snap.2087-T1
Valid prediction for snap_scaffold_5-snap.2119-T1
Valid prediction for Augustus_model.g8366.t1
Valid prediction for GlimmerHMM_glimmerT_12671-T1
Valid prediction for snap_scaffold_5-snap.2091-T1
Valid prediction for Augustus_model.g8364.t1
Valid prediction for snap_scaffold_5-snap.2115-T1
Valid prediction for snap_scaffold_5-snap.2113-T1
Valid prediction for CodingQuarry_transcript_52249-T1
Couldn't classify 250205, 250753
Sorry, prediction pasa_asmbl_45743.p1 fails validation.
(AGA)	 CA	250205-250753	GA	GAG
Valid prediction for snap_scaffold_5-snap.2105-T1
Valid prediction for GlimmerHMM_glimmerT_12676-T1
Couldn't classify 194013, 194102
Sorry, prediction pasa_asmbl_45741.p1 fails validation.
(GGC)	 CA	194013-194102	GC	AGG
(AGT)	 AG	194330-194453	GT	AGG
(GTG)	 AG	194555-194707	GT	AGG
(CCA)	 AG	194920-195102	GT	AGG
(GTG)	 AG	195275-195393	CC	AAC
add_exon() Sorry, pasa_asmbl_45741.p1 194920-195102-terminal-1 is invalid.
-recovered pasa_asmbl_45741.p1, terminal, 194920, 195102
-recovered pasa_asmbl_45741.p1, terminal, 195275, 195393
-recovered pasa_asmbl_45741.p1, internal, 194330, 194453
-recovered pasa_asmbl_45741.p1, internal, 194555, 194707
-recovered pasa_asmbl_45741.p1, internal, 194920, 195102
Valid prediction for Augustus_model.g8368.t1
Valid prediction for snap_scaffold_5-snap.2110-T1
Valid prediction for snap_scaffold_5-snap.2097-T1
Valid prediction for GlimmerHMM_glimmerT_12652-T1
Valid prediction for GlimmerHMM_glimmerT_12661-T1
Valid prediction for snap_scaffold_5-snap.2106-T1
Valid prediction for GlimmerHMM_glimmerT_12649-T1
Valid prediction for GlimmerHMM_glimmerT_12668-T1
Valid prediction for GlimmerHMM_glimmerT_12669-T1
Valid prediction for snap_scaffold_5-snap.2085-T1
Valid prediction for GlimmerHMM_glimmerT_12662-T1
Valid prediction for snap_scaffold_5-snap.2100-T1
Valid prediction for GlimmerHMM_glimmerT_12656-T1
Valid prediction for GlimmerHMM_glimmerT_12645-T1
Valid prediction for Augustus_model.g8380.t1
Couldn't classify 177475, 177489
Couldn't classify 178778, 178812
Sorry, prediction pasa_asmbl_45738.p1 fails validation.
(CCT)	 AT	177475-177489	GT	AGG
(TCC)	 AG	177563-177692	GT	TGG
(GTC)	 AG	177794-177985	GT	GGG
(GTG)	 AG	178173-178256	GT	AGG
(GAG)	 AG	178412-178570	GT	AGG
(ATG)	 AG	178778-178812	AC	ACA
-recovered pasa_asmbl_45738.p1, internal, 177563, 177692
-recovered pasa_asmbl_45738.p1, internal, 177794, 177985
-recovered pasa_asmbl_45738.p1, internal, 178173, 178256
-recovered pasa_asmbl_45738.p1, internal, 178412, 178570
Valid prediction for GlimmerHMM_glimmerT_12644-T1
Valid prediction for GlimmerHMM_glimmerT_12666-T1
Valid prediction for Augustus_model.g8387.t1
Valid prediction for Augustus_model.g8376.t1
Valid prediction for snap_scaffold_5-snap.2125-T1
Valid prediction for snap_scaffold_5-snap.2123-T1
Valid prediction for Augustus_model.g8365.t1
Valid prediction for CodingQuarry_transcript_52252-T1
Valid prediction for snap_scaffold_5-snap.2128-T1
Valid prediction for GlimmerHMM_glimmerT_12659-T1
Valid prediction for GlimmerHMM_glimmerT_12657-T1
Valid prediction for Augustus_model.g8373.t1
Valid prediction for snap_scaffold_5-snap.2092-T1
Valid prediction for snap_scaffold_5-snap.2102-T1
Valid prediction for snap_scaffold_5-snap.2090-T1
Valid prediction for GlimmerHMM_glimmerT_12663-T1
Valid prediction for GlimmerHMM_glimmerT_12664-T1
Valid prediction for GlimmerHMM_glimmerT_12654-T1
Valid prediction for Augustus_model.g8369.t1
Valid prediction for GlimmerHMM_glimmerT_12658-T1
Valid prediction for snap_scaffold_5-snap.2116-T1
Valid prediction for CodingQuarry_transcript_52251-T1
Valid prediction for GlimmerHMM_glimmerT_12647-T1
Valid prediction for snap_scaffold_5-snap.2126-T1
Valid prediction for snap_scaffold_5-snap.2081-T1
Valid prediction for snap_scaffold_5-snap.2080-T1
Valid prediction for GlimmerHMM_glimmerT_12674-T1
Valid prediction for Augustus_model.g8370.t1
Valid prediction for Augustus_model.g8378.t1
Valid prediction for snap_scaffold_5-snap.2094-T1
Valid prediction for snap_scaffold_5-snap.2117-T1
Valid prediction for snap_scaffold_5-snap.2083-T1
Valid prediction for GlimmerHMM_glimmerT_12660-T1
Valid prediction for snap_scaffold_5-snap.2095-T1
Valid prediction for GlimmerHMM_glimmerT_12653-T1
Valid prediction for CodingQuarry_transcript_52250-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_12646-T1
Valid prediction for snap_scaffold_5-snap.2086-T1
Valid prediction for snap_scaffold_5-snap.2109-T1
Valid prediction for snap_scaffold_5-snap.2124-T1
Valid prediction for snap_scaffold_5-snap.2120-T1
Valid prediction for HiQ_model.g8377.t1
Couldn't classify 73280, 73357
Sorry, prediction pasa_asmbl_44407.p1 fails validation.
(ATG)	 TC	72002-72097	GT	CTG
(GTT)	 AG	72221-72347	GT	CGG
(GGT)	 AG	72502-72626	GT	AGG
(CGG)	 AG	72743-72865	GT	AGG
(GCA)	 AG	72946-73065	GT	AGG
(GTT)	 AG	73145-73207	GT	AGG
(ATT)	 AG	73280-73357	AC	GAA
-recovered pasa_asmbl_44407.p1, initial, 72002, 72097
-recovered pasa_asmbl_44407.p1, internal, 72221, 72347
-recovered pasa_asmbl_44407.p1, internal, 72502, 72626
-recovered pasa_asmbl_44407.p1, internal, 72743, 72865
-recovered pasa_asmbl_44407.p1, internal, 72946, 73065
-recovered pasa_asmbl_44407.p1, internal, 73145, 73207
Valid prediction for Augustus_model.g8384.t1
Valid prediction for snap_scaffold_5-snap.2098-T1
Valid prediction for snap_scaffold_5-snap.2093-T1
Valid prediction for GlimmerHMM_glimmerT_12673-T1
Valid prediction for snap_scaffold_5-snap.2088-T1
Valid prediction for snap_scaffold_5-snap.2096-T1
Valid prediction for Augustus_model.g8383.t1
Valid prediction for Augustus_model.g8372.t1
Valid prediction for Augustus_model.g8375.t1
Valid prediction for snap_scaffold_5-snap.2104-T1
Valid prediction for snap_scaffold_5-snap.2118-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g8363.t1
Valid prediction for Augustus_model.g8367.t1
Valid prediction for snap_scaffold_5-snap.2099-T1
Valid prediction for Augustus_model.g8362.t1
Couldn't classify 77076, 77313
Couldn't classify 77471, 77595
Sorry, prediction pasa_asmbl_44406.p1 fails validation.
(GCA)	 GG	77076-77313	GT	AGG
(GAA)	 AG	77471-77595	AC	GGA
Valid prediction for snap_scaffold_5-snap.2082-T1
Couldn't classify 47252, 47317
Sorry, prediction pasa_asmbl_44409.p1 fails validation.
(TCA)	 AA	47252-47317	GT	CTG
(TTC)	 AG	47495-47524	GT	AGG
(AAC)	 AG	47831-47902	GT	GGG
(AGG)	 AG	48106-48324	AT	AGA
-recovered pasa_asmbl_44409.p1, terminal, 48106, 48324
-recovered pasa_asmbl_44409.p1, internal, 47495, 47524
-recovered pasa_asmbl_44409.p1, internal, 47831, 47902
Valid prediction for Augustus_model.g8386.t1
Couldn't classify 77722, 78271
Sorry, prediction pasa_asmbl_44405.p1 fails validation.
(AAC)	 GA	77722-78271	GT	AGG
(GGA)	 AG	79249-79403	GT	AGG
(GCT)	 AG	79562-79666	GT	AGG
(AAT)	 AG	79769-79918	GT	CGG
(GAG)	 AG	80138-80260	GT	TGG
(GAG)	 AG	80353-80442	GT	AGG
(AGG)	 AG	80661-80903	GT	TGG
(ATT)	 AG	81116-81251	GT	AGG
(TGC)	 AG	81824-81935	GT	AGG
(GGA)	 AG	82290-82459	GT	AGG
(GTA)	 AG	82534-82664	GT	AGG
(GAA)	 AG	82785-82910	GT	AGG
(TCT)	 AG	83067-83123	GT	AGG
(ATG)	 AG	83292-83411	GT	AGG
(GGC)	 AG	83514-83681	CA	AGC
-recovered pasa_asmbl_44405.p1, initial, 83292, 83411
add_exon() Sorry, pasa_asmbl_44405.p1 82290-82459-terminal-2 is invalid.
-recovered pasa_asmbl_44405.p1, terminal, 82290, 82459
-recovered pasa_asmbl_44405.p1, terminal, 83514, 83681
-recovered pasa_asmbl_44405.p1, internal, 79249, 79403
-recovered pasa_asmbl_44405.p1, internal, 79562, 79666
-recovered pasa_asmbl_44405.p1, internal, 79769, 79918
-recovered pasa_asmbl_44405.p1, internal, 80138, 80260
-recovered pasa_asmbl_44405.p1, internal, 80353, 80442
-recovered pasa_asmbl_44405.p1, internal, 80661, 80903
-recovered pasa_asmbl_44405.p1, internal, 81116, 81251
-recovered pasa_asmbl_44405.p1, internal, 81824, 81935
-recovered pasa_asmbl_44405.p1, internal, 82290, 82459
-recovered pasa_asmbl_44405.p1, internal, 82534, 82664
-recovered pasa_asmbl_44405.p1, internal, 82785, 82910
-recovered pasa_asmbl_44405.p1, internal, 83067, 83123
-recovered pasa_asmbl_44405.p1, internal, 83292, 83411
Valid prediction for snap_scaffold_5-snap.2107-T1
Valid prediction for snap_scaffold_5-snap.2122-T1
Valid prediction for GlimmerHMM_glimmerT_12642-T1
Valid prediction for snap_scaffold_5-snap.2089-T1
Valid prediction for GlimmerHMM_glimmerT_12665-T1
Valid prediction for snap_scaffold_5-snap.2084-T1
Valid prediction for Augustus_model.g8379.t1
Valid prediction for GlimmerHMM_glimmerT_12651-T1
Valid prediction for GlimmerHMM_glimmerT_12670-T1
Valid prediction for snap_scaffold_5-snap.2111-T1
Valid prediction for GlimmerHMM_glimmerT_12655-T1
Valid prediction for Augustus_model.g8385.t1
Valid prediction for snap_scaffold_5-snap.2103-T1
Valid prediction for snap_scaffold_5-snap.2121-T1
Valid prediction for GlimmerHMM_glimmerT_12667-T1
Valid prediction for GlimmerHMM_glimmerT_12643-T1
Valid prediction for GlimmerHMM_glimmerT_12675-T1
Valid prediction for Augustus_model.g8371.t1
Valid prediction for Augustus_model.g8382.t1
Valid prediction for snap_scaffold_5-snap.2114-T1
Valid prediction for snap_scaffold_5-snap.2101-T1
Valid prediction for snap_scaffold_5-snap.2112-T1
Valid prediction for GlimmerHMM_glimmerT_12650-T1
Valid prediction for snap_scaffold_5-snap.2127-T1
Valid prediction for GlimmerHMM_glimmerT_12672-T1
Valid prediction for snap_scaffold_5-snap.2108-T1
Couldn't classify 33513, 33642
Sorry, prediction pasa_asmbl_44410.p1 fails validation.
(AGG)	 AG	33513-33642	GT	ACG
(CCC)	 AG	33838-33981	GT	AGG
(AGG)	 AG	34622-34911	AA	AAA
-recovered pasa_asmbl_44410.p1, terminal, 34622, 34911
-recovered pasa_asmbl_44410.p1, internal, 33513, 33642
-recovered pasa_asmbl_44410.p1, internal, 33838, 33981

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 28641, rend_intergenic: 23849  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42701, rend_intergenic: 29881  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46821, rend_intergenic: 43477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50061, rend_intergenic: 47305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51943, rend_intergenic: 50694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54528, rend_intergenic: 53234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72671, rend_intergenic: 55502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80290, rend_intergenic: 74998  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89369, rend_intergenic: 84855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109198, rend_intergenic: 95269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135270, rend_intergenic: 128738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146577, rend_intergenic: 135328  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156710, rend_intergenic: 148096  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172429, rend_intergenic: 169448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221340, rend_intergenic: 218396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 243468, rend_intergenic: 229852  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 251058, rend_intergenic: 247653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 253128
-exon list size: 467


building trellis

0.2    
0.4    
0.6    
0.9    
1.1    
1.3    
1.5    
1.7    
1.9    
2.1    
2.3    
2.6    
2.8    
3.0    
3.2    
3.4    
3.6    
3.8    
4.1    
4.3    
4.5    
4.7    
4.9    
5.1    
5.3    
5.5    
5.8    
6.0    
6.2    
6.4    
6.6    
6.8    
7.0    
7.2    
7.5    
7.7    
7.9    
8.1    
8.3    
8.5    
8.7    
9.0    
9.2    
9.4    
9.6    
9.8    
10.0    
10.2    
10.4    
10.7    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.2    
12.4    
12.6    
12.8    
13.0    
13.2    
13.4    
13.6    
13.9    
14.1    
14.3    
14.5    
14.7    
14.9    
15.1    
15.4    
15.6    
15.8    
16.0    
16.2    
16.4    
16.6    
16.8    
17.1    
17.3    
17.5    
17.7    
17.9    
18.1    
18.3    
18.6    
18.8    
19.0    
19.2    
19.4    
19.6    
19.8    
20.0    
20.3    
20.5    
20.7    
20.9    
21.1    
21.3    
21.5    
21.7    
22.0    
22.2    
22.4    
22.6    
22.8    
23.0    
23.2    
23.5    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.2    
25.4    
25.6    
25.8    
26.0    
26.2    
26.4    
26.7    
26.9    
27.1    
27.3    
27.5    
27.7    
27.9    
28.1    
28.4    
28.6    
28.8    
29.0    
29.2    
29.4    
29.6    
29.9    
30.1    
30.3    
30.5    
30.7    
30.9    
31.1    
31.3    
31.6    
31.8    
32.0    
32.2    
32.4    
32.6    
32.8    
33.0    
33.3    
33.5    
33.7    
33.9    
34.1    
34.3    
34.5    
34.8    
35.0    
35.2    
35.4    
35.6    
35.8    
36.0    
36.2    
36.5    
36.7    
36.9    
37.1    
37.3    
37.5    
37.7    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.2    
39.4    
39.7    
39.9    
40.1    
40.3    
40.5    
40.7    
40.9    
41.2    
41.4    
41.6    
41.8    
42.0    
42.2    
42.4    
42.6    
42.9    
43.1    
43.3    
43.5    
43.7    
43.9    
44.1    
44.3    
44.6    
44.8    
45.0    
45.2    
45.4    
45.6    
45.8    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.3    
47.5    
47.8    
48.0    
48.2    
48.4    
48.6    
48.8    
49.0    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
51.0    
51.2    
51.4    
51.6    
51.8    
52.0    
52.2    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.2    
54.4    
54.6    
54.8    
55.0    
55.2    
55.4    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.4    
57.6    
57.8    
58.0    
58.2    
58.4    
58.6    
58.8    
59.1    
59.3    
59.5    
59.7    
59.9    
60.1    
60.3    
60.6    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.8    
64.0    
64.2    
64.4    
64.6    
64.8    
65.0    
65.2    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
67.0    
67.2    
67.4    
67.6    
67.8    
68.0    
68.2    
68.4    
68.7    
68.9    
69.1    
69.3    
69.5    
69.7    
69.9    
70.1    
70.4    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.1    
73.3    
73.6    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.3    
78.5    
78.7    
78.9    
79.1    
79.3    
79.5    
79.7    
80.0    
80.2    
80.4    
80.6    
80.8    
81.0    
81.2    
81.4    
81.7    
81.9    
82.1    
82.3    
82.5    
82.7    
82.9    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.9    
85.1    
85.3    
85.5    
85.7    
85.9    
86.1    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.6    
87.8    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.6    
89.8    
90.0    
90.2    
90.4    
90.6    
90.8    
91.0    
91.3    
91.5    
91.7    
91.9    
92.1    
92.3    
92.5    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.5    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.7    
97.9    
98.1    
98.3    
98.5    
98.7    
98.9    
99.1    
99.4    
99.6    
99.8    
-found 40 predictions from path traversal
Error with prediction: snap lend_intergenic: 28641, rend_intergenic: 23849  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42701, rend_intergenic: 29881  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46821, rend_intergenic: 43477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50061, rend_intergenic: 47305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51943, rend_intergenic: 50694  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54528, rend_intergenic: 53234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72671, rend_intergenic: 55502  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80290, rend_intergenic: 74998  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89369, rend_intergenic: 84855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109198, rend_intergenic: 95269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135270, rend_intergenic: 128738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146577, rend_intergenic: 135328  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156710, rend_intergenic: 148096  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172429, rend_intergenic: 169448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221340, rend_intergenic: 218396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 243468, rend_intergenic: 229852  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 251058, rend_intergenic: 247653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support